View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4932_low_5 (Length: 291)
Name: NF4932_low_5
Description: NF4932
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4932_low_5 |
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Alignment Details
Target: chr1 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 19 - 230
Target Start/End: Original strand, 11758505 - 11758716
Alignment:
| Q |
19 |
gtagcgagttttcacaaggatccgttggtgaaactccttctcatacttattcgttgcttcttcgataccgcgacgaattcgcgaagctaggttctccggt |
118 |
Q |
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| T |
11758505 |
gtagcgagttttcacaaggatccgttggtgaaactccttctcatacttattcgttgcttcttcgataccgcgacgaattcgcaaagctaggttctccggt |
11758604 |
T |
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| Q |
119 |
taaagctacttcaattgttgtagaagatttttctcttcataacaatgtacgttttgtttcatcaatttcttagttcaaaatgttaataatatgctaatta |
218 |
Q |
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| T |
11758605 |
taaagctacttcaattgttgtagaagatttttctcttcataacaatgtacgttttgtttcatcaatttcttagttcaaaatgttaataatatgctaatta |
11758704 |
T |
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| Q |
219 |
ttctagtttaac |
230 |
Q |
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|||||||||||| |
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| T |
11758705 |
ttctagtttaac |
11758716 |
T |
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