View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4932_low_6 (Length: 242)

Name: NF4932_low_6
Description: NF4932
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4932_low_6
NF4932_low_6
[»] chr6 (4 HSPs)
chr6 (1-225)||(31948283-31948504)
chr6 (180-225)||(4889942-4889987)
chr6 (181-225)||(24949879-24949923)
chr6 (187-224)||(16661424-16661461)
[»] chr5 (14 HSPs)
chr5 (1-119)||(9387954-9388072)
chr5 (171-225)||(40796875-40796929)
chr5 (181-225)||(26801914-26801958)
chr5 (181-225)||(26809464-26809508)
chr5 (181-225)||(26824491-26824535)
chr5 (181-225)||(27674424-27674468)
chr5 (181-225)||(1831271-1831315)
chr5 (181-225)||(40316738-40316782)
chr5 (181-225)||(41410759-41410803)
chr5 (187-225)||(2799839-2799877)
chr5 (187-225)||(2806005-2806043)
chr5 (187-225)||(30788412-30788450)
chr5 (189-225)||(4047904-4047940)
chr5 (182-222)||(34347687-34347727)
[»] chr8 (10 HSPs)
chr8 (181-225)||(38036668-38036712)
chr8 (188-225)||(20671463-20671500)
chr8 (181-225)||(67302-67346)
chr8 (170-225)||(32909262-32909317)
chr8 (170-225)||(40645889-40645944)
chr8 (170-224)||(8058404-8058458)
chr8 (187-225)||(8123845-8123883)
chr8 (181-219)||(29917738-29917776)
chr8 (181-225)||(1645216-1645260)
chr8 (181-225)||(14512047-14512091)
[»] chr7 (13 HSPs)
chr7 (181-225)||(29247834-29247878)
chr7 (182-225)||(3123960-3124003)
chr7 (181-225)||(37099689-37099733)
chr7 (181-225)||(41007770-41007814)
chr7 (181-225)||(47713245-47713289)
chr7 (170-225)||(5842325-5842380)
chr7 (171-214)||(39174032-39174075)
chr7 (170-224)||(25571494-25571548)
chr7 (188-225)||(31496467-31496504)
chr7 (190-219)||(46242300-46242329)
chr7 (187-219)||(19817548-19817580)
chr7 (169-225)||(35693631-35693687)
chr7 (182-218)||(41844984-41845020)
[»] chr4 (13 HSPs)
chr4 (181-225)||(2805983-2806027)
chr4 (167-224)||(24505719-24505776)
chr4 (170-225)||(47833945-47834000)
chr4 (167-225)||(1615746-1615804)
chr4 (168-225)||(4271813-4271870)
chr4 (181-225)||(39260559-39260603)
chr4 (181-225)||(11260909-11260953)
chr4 (181-225)||(48079860-48079904)
chr4 (171-225)||(37588332-37588386)
chr4 (181-218)||(50685134-50685171)
chr4 (180-225)||(54802869-54802914)
chr4 (185-225)||(17492874-17492914)
chr4 (181-225)||(51716738-51716782)
[»] chr3 (7 HSPs)
chr3 (181-225)||(9997688-9997732)
chr3 (181-225)||(10228537-10228581)
chr3 (184-225)||(36594229-36594270)
chr3 (181-225)||(10106192-10106236)
chr3 (181-225)||(10232293-10232337)
chr3 (189-225)||(53020035-53020071)
chr3 (181-225)||(44821342-44821386)
[»] chr1 (13 HSPs)
chr1 (169-225)||(43452970-43453026)
chr1 (167-224)||(26476812-26476869)
chr1 (181-225)||(5117251-5117295)
chr1 (181-224)||(44963489-44963532)
chr1 (187-225)||(40058790-40058828)
chr1 (187-225)||(12685752-12685790)
chr1 (171-225)||(48613888-48613942)
chr1 (171-215)||(10648006-10648050)
chr1 (181-219)||(6871062-6871100)
chr1 (171-225)||(48312235-48312289)
chr1 (181-225)||(10100330-10100374)
chr1 (181-225)||(25815735-25815779)
chr1 (181-225)||(47912488-47912532)
[»] scaffold0195 (1 HSPs)
scaffold0195 (168-225)||(45-102)
[»] chr2 (6 HSPs)
chr2 (181-225)||(7601209-7601253)
chr2 (170-219)||(31644135-31644184)
chr2 (181-225)||(2831915-2831959)
chr2 (181-225)||(25627230-25627274)
chr2 (182-218)||(43328615-43328651)
chr2 (194-225)||(44022475-44022506)
[»] scaffold0172 (1 HSPs)
scaffold0172 (181-225)||(19548-19592)
[»] scaffold0289 (1 HSPs)
scaffold0289 (187-225)||(9330-9368)
[»] scaffold0500 (1 HSPs)
scaffold0500 (181-225)||(490-534)
[»] scaffold0363 (1 HSPs)
scaffold0363 (181-225)||(17722-17766)


Alignment Details
Target: chr6 (Bit Score: 153; Significance: 3e-81; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 31948283 - 31948504
Alignment:
Q  1 tgttttgtggctccatgtgactttatgtaaagcatgtgtatccttggatgaaggtcatatgtatcatgaaaaagacaaaaacaatgcgttatgtccagtt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||    
T  31948283 tgttttgtggctccatgtgactttatgtaaagcatgtgtatccttggatgaaggttatatgtatcatgaagaagacaaaaacaatgcgttatgtccagtt 31948382  T
Q  101 ataaacgtgaccaacaaatnnnnnnnnntactaataaaattaactaataaacaacttaagactagcataatactccttttgtcccttaatacttgacaca 200  Q
    |||||||||| ||||||||         ||||||||||| |||||||||| ||| ||||||||||||||||||| | |||||||||||||||||||||||    
T  31948383 ataaacgtgatcaacaaat--aaaaaaatactaataaaactaactaataaccaaattaagactagcataatacttc-tttgtcccttaatacttgacaca 31948479  T
Q  201 gttgaccttattacgcatgtcaatg 225  Q
     ||||||||||||||||||||||||    
T  31948480 attgaccttattacgcatgtcaatg 31948504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 225
Target Start/End: Original strand, 4889942 - 4889987
Alignment:
Q  180 tgtcccttaatacttgacacagttgaccttattacgcatgtcaatg 225  Q
    |||||| ||||||||||||| ||||| |||||||||||||||||||    
T  4889942 tgtcccataatacttgacacggttgatcttattacgcatgtcaatg 4889987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 225
Target Start/End: Complemental strand, 24949923 - 24949879
Alignment:
Q  181 gtcccttaatacttgacacagttgaccttattacgcatgtcaatg 225  Q
    ||||| |||||||||| ||| ||||||||||||||||||||||||    
T  24949923 gtcccataatacttgatacaattgaccttattacgcatgtcaatg 24949879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 187 - 224
Target Start/End: Original strand, 16661424 - 16661461
Alignment:
Q  187 taatacttgacacagttgaccttattacgcatgtcaat 224  Q
    |||||||| |||||||||||||||||||| ||||||||    
T  16661424 taatactttacacagttgaccttattacgtatgtcaat 16661461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 107; Significance: 9e-54; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 9387954 - 9388072
Alignment:
Q  1 tgttttgtggctccatgtgactttatgtaaagcatgtgtatccttggatgaaggtcatatgtatcatgaaaaagacaaaaacaatgcgttatgtccagtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  9387954 tgttttgtggctccatgtgactttatgtaaagcatgtgtatcctcggatgaaggtcatatgtatcatgaaaaagacaaaaacaatgtgttatgtccagtt 9388053  T
Q  101 ataaacgtgaccaacaaat 119  Q
    |||||||||| ||||||||    
T  9388054 ataaacgtgatcaacaaat 9388072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 40796875 - 40796929
Alignment:
Q  171 tactccttttgtcccttaatacttgacacagttgaccttattacgcatgtcaatg 225  Q
    |||||| | ||||||||||||||||||||||||||||||||||||||||||||||    
T  40796875 tactccctctgtcccttaatacttgacacagttgaccttattacgcatgtcaatg 40796929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 181 - 225
Target Start/End: Original strand, 26801914 - 26801958
Alignment:
Q  181 gtcccttaatacttgacacagttgaccttattacgcatgtcaatg 225  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  26801914 gtcccttaatacttgacacagttgaccttattacgcatgtcaatg 26801958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 181 - 225
Target Start/End: Original strand, 26809464 - 26809508
Alignment:
Q  181 gtcccttaatacttgacacagttgaccttattacgcatgtcaatg 225  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  26809464 gtcccttaatacttgacacagttgaccttattacgcatgtcaatg 26809508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 181 - 225
Target Start/End: Original strand, 26824491 - 26824535
Alignment:
Q  181 gtcccttaatacttgacacagttgaccttattacgcatgtcaatg 225  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  26824491 gtcccttaatacttgacacagttgaccttattacgcatgtcaatg 26824535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 181 - 225
Target Start/End: Complemental strand, 27674468 - 27674424
Alignment:
Q  181 gtcccttaatacttgacacagttgaccttattacgcatgtcaatg 225  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  27674468 gtcccttaatacttgacacagttgaccttattacgcatgtcaatg 27674424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 181 - 225
Target Start/End: Complemental strand, 1831315 - 1831271
Alignment:
Q  181 gtcccttaatacttgacacagttgaccttattacgcatgtcaatg 225  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||    
T  1831315 gtcccttaatacttgacccagttgactttattacgcatgtcaatg 1831271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 181 - 225
Target Start/End: Complemental strand, 40316782 - 40316738
Alignment:
Q  181 gtcccttaatacttgacacagttgaccttattacgcatgtcaatg 225  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||    
T  40316782 gtcccttaatacttgacccagttgactttattacgcatgtcaatg 40316738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 181 - 225
Target Start/End: Original strand, 41410759 - 41410803
Alignment:
Q  181 gtcccttaatacttgacacagttgaccttattacgcatgtcaatg 225  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||    
T  41410759 gtcccttaatacttgacccagttgactttattacgcatgtcaatg 41410803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 187 - 225
Target Start/End: Complemental strand, 2799877 - 2799839
Alignment:
Q  187 taatacttgacacagttgaccttattacgcatgtcaatg 225  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  2799877 taatacttgacacagttgactttattacgcatgtcaatg 2799839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 187 - 225
Target Start/End: Complemental strand, 2806043 - 2806005
Alignment:
Q  187 taatacttgacacagttgaccttattacgcatgtcaatg 225  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  2806043 taatacttgacacagttgactttattacgcatgtcaatg 2806005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 225
Target Start/End: Complemental strand, 30788450 - 30788412
Alignment:
Q  187 taatacttgacacagttgaccttattacgcatgtcaatg 225  Q
    |||||||||| |||||||||||||| |||||||||||||    
T  30788450 taatacttgaaacagttgaccttataacgcatgtcaatg 30788412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 225
Target Start/End: Complemental strand, 4047940 - 4047904
Alignment:
Q  189 atacttgacacagttgaccttattacgcatgtcaatg 225  Q
    ||||||||||||||||||||| |||| ||||||||||    
T  4047940 atacttgacacagttgaccttgttacacatgtcaatg 4047904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 34347727 - 34347687
Alignment:
Q  182 tcccttaatacttgacacagttgaccttattacgcatgtca 222  Q
    |||| ||||| |||||| |||||||||||||||||||||||    
T  34347727 tcccataatatttgacatagttgaccttattacgcatgtca 34347687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 9e-17; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 181 - 225
Target Start/End: Original strand, 38036668 - 38036712
Alignment:
Q  181 gtcccttaatacttgacacagttgaccttattacgcatgtcaatg 225  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  38036668 gtcccttaatacttgacacagttgaccttattacgcatgtcaatg 38036712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 188 - 225
Target Start/End: Complemental strand, 20671500 - 20671463
Alignment:
Q  188 aatacttgacacagttgaccttattacgcatgtcaatg 225  Q
    ||||||||||||||||||||||||||||||||||||||    
T  20671500 aatacttgacacagttgaccttattacgcatgtcaatg 20671463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 181 - 225
Target Start/End: Complemental strand, 67346 - 67302
Alignment:
Q  181 gtcccttaatacttgacacagttgaccttattacgcatgtcaatg 225  Q
    ||||| |||||||||||| ||||||||||||||||||||||||||    
T  67346 gtcccataatacttgacatagttgaccttattacgcatgtcaatg 67302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 225
Target Start/End: Complemental strand, 32909317 - 32909262
Alignment:
Q  170 atactccttttgtcccttaatacttgacacagttgaccttattacgcatgtcaatg 225  Q
    ||||||| || |||||||||||||||||||| ||||  ||||||||||||||||||    
T  32909317 atactcccttcgtcccttaatacttgacacaattgattttattacgcatgtcaatg 32909262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 225
Target Start/End: Complemental strand, 40645944 - 40645889
Alignment:
Q  170 atactccttttgtcccttaatacttgacacagttgaccttattacgcatgtcaatg 225  Q
    ||||||| || ||||| |||||||| ||||| ||||||||||||||||||||||||    
T  40645944 atactcccttcgtcccataatacttaacacaattgaccttattacgcatgtcaatg 40645889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 170 - 224
Target Start/End: Original strand, 8058404 - 8058458
Alignment:
Q  170 atactccttttgtcccttaatacttgacacagttgaccttattacgcatgtcaat 224  Q
    ||||||| || ||||| ||||||||||||||||| ||||||||||||||| ||||    
T  8058404 atactcccttcgtcccataatacttgacacagttaaccttattacgcatgccaat 8058458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 225
Target Start/End: Complemental strand, 8123883 - 8123845
Alignment:
Q  187 taatacttgacacagttgaccttattacgcatgtcaatg 225  Q
    |||||||||||||| |||||||||||| |||||||||||    
T  8123883 taatacttgacacatttgaccttattatgcatgtcaatg 8123845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 219
Target Start/End: Original strand, 29917738 - 29917776
Alignment:
Q  181 gtcccttaatacttgacacagttgaccttattacgcatg 219  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  29917738 gtcccttaatacttgacacaatcgaccttattacgcatg 29917776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 225
Target Start/End: Original strand, 1645216 - 1645260
Alignment:
Q  181 gtcccttaatacttgacacagttgaccttattacgcatgtcaatg 225  Q
    ||||| |||||||||| |||  |||||||||||||||||||||||    
T  1645216 gtcccataatacttgatacatatgaccttattacgcatgtcaatg 1645260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 225
Target Start/End: Complemental strand, 14512091 - 14512047
Alignment:
Q  181 gtcccttaatacttgacacagttgaccttattacgcatgtcaatg 225  Q
    |||| ||||||||||||||| |||| ||||||| |||||||||||    
T  14512091 gtcctttaatacttgacacaattgatcttattatgcatgtcaatg 14512047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 9e-17; HSPs: 13)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 181 - 225
Target Start/End: Complemental strand, 29247878 - 29247834
Alignment:
Q  181 gtcccttaatacttgacacagttgaccttattacgcatgtcaatg 225  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  29247878 gtcccttaatacttgacacagttgaccttattacgcatgtcaatg 29247834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 182 - 225
Target Start/End: Original strand, 3123960 - 3124003
Alignment:
Q  182 tcccttaatacttgacacagttgaccttattacgcatgtcaatg 225  Q
    |||| |||||||||||||||||||||||||||||||||||||||    
T  3123960 tcccataatacttgacacagttgaccttattacgcatgtcaatg 3124003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 181 - 225
Target Start/End: Original strand, 37099689 - 37099733
Alignment:
Q  181 gtcccttaatacttgacacagttgaccttattacgcatgtcaatg 225  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||    
T  37099689 gtcccataatacttgacacagttgatcttattacgcatgtcaatg 37099733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 181 - 225
Target Start/End: Original strand, 41007770 - 41007814
Alignment:
Q  181 gtcccttaatacttgacacagttgaccttattacgcatgtcaatg 225  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||    
T  41007770 gtcccataatacttgacacagttgaccttattacgtatgtcaatg 41007814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 225
Target Start/End: Original strand, 47713245 - 47713289
Alignment:
Q  181 gtcccttaatacttgacacagttgaccttattacgcatgtcaatg 225  Q
    ||||| ||||| |||||||| ||||||||||||||||||||||||    
T  47713245 gtcccataatatttgacacaattgaccttattacgcatgtcaatg 47713289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 225
Target Start/End: Complemental strand, 5842380 - 5842325
Alignment:
Q  170 atactccttttgtcccttaatacttgacacagttgaccttattacgcatgtcaatg 225  Q
    |||||||||  ||||| |||||| |||||||||||||| ||||||| |||||||||    
T  5842380 atactccttccgtcccataatacatgacacagttgaccatattacgaatgtcaatg 5842325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 214
Target Start/End: Complemental strand, 39174075 - 39174032
Alignment:
Q  171 tactccttttgtcccttaatacttgacacagttgaccttattac 214  Q
    |||| ||| |||||| ||||||||||||||||||||||||||||    
T  39174075 tacttcttctgtcccataatacttgacacagttgaccttattac 39174032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 224
Target Start/End: Original strand, 25571494 - 25571548
Alignment:
Q  170 atactccttttgtcccttaatacttgacacagttgaccttattacgcatgtcaat 224  Q
    ||||||| || ||||| |||||| |||||||||||||| ||||||| ||||||||    
T  25571494 atactcccttcgtcccataatacgtgacacagttgaccctattacgaatgtcaat 25571548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 188 - 225
Target Start/End: Original strand, 31496467 - 31496504
Alignment:
Q  188 aatacttgacacagttgaccttattacgcatgtcaatg 225  Q
    |||| |||| ||||||||||||||||||||||||||||    
T  31496467 aatatttgatacagttgaccttattacgcatgtcaatg 31496504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 219
Target Start/End: Original strand, 46242300 - 46242329
Alignment:
Q  190 tacttgacacagttgaccttattacgcatg 219  Q
    ||||||||||||||||||||||||||||||    
T  46242300 tacttgacacagttgaccttattacgcatg 46242329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 219
Target Start/End: Complemental strand, 19817580 - 19817548
Alignment:
Q  187 taatacttgacacagttgaccttattacgcatg 219  Q
    |||||||||||| ||||||||||||||||||||    
T  19817580 taatacttgacatagttgaccttattacgcatg 19817548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 225
Target Start/End: Original strand, 35693631 - 35693687
Alignment:
Q  169 aatactccttttgtcccttaatacttgacacagttgaccttattacgcatgtcaatg 225  Q
    |||||||| || |||||||||||  ||||||||||||||  ||||||||| ||||||    
T  35693631 aatactcccttcgtcccttaataagtgacacagttgacccaattacgcatatcaatg 35693687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 218
Target Start/End: Complemental strand, 41845020 - 41844984
Alignment:
Q  182 tcccttaatacttgacacagttgaccttattacgcat 218  Q
    ||||||||||||| ||||| |||||||||||||||||    
T  41845020 tcccttaatacttaacacatttgaccttattacgcat 41844984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 45; Significance: 9e-17; HSPs: 13)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 181 - 225
Target Start/End: Original strand, 2805983 - 2806027
Alignment:
Q  181 gtcccttaatacttgacacagttgaccttattacgcatgtcaatg 225  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  2805983 gtcccttaatacttgacacagttgaccttattacgcatgtcaatg 2806027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 167 - 224
Target Start/End: Complemental strand, 24505776 - 24505719
Alignment:
Q  167 ataatactccttttgtcccttaatacttgacacagttgaccttattacgcatgtcaat 224  Q
    |||||||||| |  |||||||||||||||||| |||||||||||||||||||||||||    
T  24505776 ataatactccctccgtcccttaatacttgacatagttgaccttattacgcatgtcaat 24505719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 170 - 225
Target Start/End: Original strand, 47833945 - 47834000
Alignment:
Q  170 atactccttttgtcccttaatacttgacacagttgaccttattacgcatgtcaatg 225  Q
    ||||||| | |||| |||||||||||||||||||||| ||||||||||||||||||    
T  47833945 atactccctctgtctcttaatacttgacacagttgactttattacgcatgtcaatg 47834000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 167 - 225
Target Start/End: Complemental strand, 1615804 - 1615746
Alignment:
Q  167 ataatactccttttgtcccttaatacttgacacagttgaccttattacgcatgtcaatg 225  Q
    ||||||||||||  ||||||||||| |||||||| || |||||||||||||||||||||    
T  1615804 ataatactccttccgtcccttaatatttgacacaattaaccttattacgcatgtcaatg 1615746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 168 - 225
Target Start/End: Original strand, 4271813 - 4271870
Alignment:
Q  168 taatactccttttgtcccttaatacttgacacagttgaccttattacgcatgtcaatg 225  Q
    ||||||||| |  ||||| ||||||||||||||||||||||||||||||||| |||||    
T  4271813 taatactccctccgtcccataatacttgacacagttgaccttattacgcatgccaatg 4271870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 181 - 225
Target Start/End: Complemental strand, 39260603 - 39260559
Alignment:
Q  181 gtcccttaatacttgacacagttgaccttattacgcatgtcaatg 225  Q
    |||||||||||||||||||| |||| |||||||||||||||||||    
T  39260603 gtcccttaatacttgacacaattgatcttattacgcatgtcaatg 39260559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 225
Target Start/End: Complemental strand, 11260953 - 11260909
Alignment:
Q  181 gtcccttaatacttgacacagttgaccttattacgcatgtcaatg 225  Q
    ||||||||||| |||||||| |||| |||||||||||||||||||    
T  11260953 gtcccttaatatttgacacaattgatcttattacgcatgtcaatg 11260909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 225
Target Start/End: Original strand, 48079860 - 48079904
Alignment:
Q  181 gtcccttaatacttgacacagttgaccttattacgcatgtcaatg 225  Q
    ||||||||| |||||||||| |||| |||||||||||||||||||    
T  48079860 gtcccttaaaacttgacacatttgatcttattacgcatgtcaatg 48079904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 37588332 - 37588386
Alignment:
Q  171 tactccttttgtcccttaatacttgacacagttgaccttattacgcatgtcaatg 225  Q
    ||||||||  ||||| ||||||||||||||||||| |||||| |||||| |||||    
T  37588332 tactccttccgtcccataatacttgacacagttgatcttattgcgcatgccaatg 37588386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 181 - 218
Target Start/End: Complemental strand, 50685171 - 50685134
Alignment:
Q  181 gtcccttaatacttgacacagttgaccttattacgcat 218  Q
    ||||| ||||||||||||||||||||| ||||||||||    
T  50685171 gtcccataatacttgacacagttgaccctattacgcat 50685134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 180 - 225
Target Start/End: Original strand, 54802869 - 54802914
Alignment:
Q  180 tgtcccttaatacttgacacagttgaccttattacgcatgtcaatg 225  Q
    |||||| |||||||||| | ||||||||||||||||||||| ||||    
T  54802869 tgtcccataatacttgatagagttgaccttattacgcatgttaatg 54802914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 225
Target Start/End: Complemental strand, 17492914 - 17492874
Alignment:
Q  185 cttaatacttgacacagttgaccttattacgcatgtcaatg 225  Q
    ||||||||||||||||||| |||||||||| ||| ||||||    
T  17492914 cttaatacttgacacagttaaccttattacacatatcaatg 17492874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 225
Target Start/End: Complemental strand, 51716782 - 51716738
Alignment:
Q  181 gtcccttaatacttgacacagttgaccttattacgcatgtcaatg 225  Q
    ||||||||||| |||||| |||||| ||||||| |||||||||||    
T  51716782 gtcccttaatatttgacatagttgagcttattatgcatgtcaatg 51716738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 9e-17; HSPs: 7)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 181 - 225
Target Start/End: Original strand, 9997688 - 9997732
Alignment:
Q  181 gtcccttaatacttgacacagttgaccttattacgcatgtcaatg 225  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  9997688 gtcccttaatacttgacacagttgaccttattacgcatgtcaatg 9997732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 181 - 225
Target Start/End: Original strand, 10228537 - 10228581
Alignment:
Q  181 gtcccttaatacttgacacagttgaccttattacgcatgtcaatg 225  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  10228537 gtcccttaatacttgacacagttgaccttattacgcatgtcaatg 10228581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 184 - 225
Target Start/End: Original strand, 36594229 - 36594270
Alignment:
Q  184 ccttaatacttgacacagttgaccttattacgcatgtcaatg 225  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  36594229 ccttaatacttgacacagttgaccttattacgcatgtcaatg 36594270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 181 - 225
Target Start/End: Original strand, 10106192 - 10106236
Alignment:
Q  181 gtcccttaatacttgacacagttgaccttattacgcatgtcaatg 225  Q
    |||||||||||||||||||||||||| ||||||||||||||||||    
T  10106192 gtcccttaatacttgacacagttgactttattacgcatgtcaatg 10106236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 181 - 225
Target Start/End: Original strand, 10232293 - 10232337
Alignment:
Q  181 gtcccttaatacttgacacagttgaccttattacgcatgtcaatg 225  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||    
T  10232293 gtcctttaatacttgacacagttgactttattacgcatgtcaatg 10232337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 189 - 225
Target Start/End: Complemental strand, 53020071 - 53020035
Alignment:
Q  189 atacttgacacagttgaccttattacgcatgtcaatg 225  Q
    |||||||||||||||||||||||||||||||||||||    
T  53020071 atacttgacacagttgaccttattacgcatgtcaatg 53020035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 225
Target Start/End: Original strand, 44821342 - 44821386
Alignment:
Q  181 gtcccttaatacttgacacagttgaccttattacgcatgtcaatg 225  Q
    |||| ||||||||||||||| |||||||||||||  |||||||||    
T  44821342 gtcctttaatacttgacacaattgaccttattacatatgtcaatg 44821386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 9e-17; HSPs: 13)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 169 - 225
Target Start/End: Original strand, 43452970 - 43453026
Alignment:
Q  169 aatactccttttgtcccttaatacttgacacagttgaccttattacgcatgtcaatg 225  Q
    |||||||||| | ||||||||||||||||||||||||||||||||||||| ||||||    
T  43452970 aatactccttgtatcccttaatacttgacacagttgaccttattacgcatatcaatg 43453026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 167 - 224
Target Start/End: Original strand, 26476812 - 26476869
Alignment:
Q  167 ataatactccttttgtcccttaatacttgacacagttgaccttattacgcatgtcaat 224  Q
    |||||||||| |  || |||||||||||||||||||||||||||||||||||||||||    
T  26476812 ataatactccctccgttccttaatacttgacacagttgaccttattacgcatgtcaat 26476869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 181 - 225
Target Start/End: Original strand, 5117251 - 5117295
Alignment:
Q  181 gtcccttaatacttgacacagttgaccttattacgcatgtcaatg 225  Q
    ||||||||||||||||||||||||| |||||||||||||||||||    
T  5117251 gtcccttaatacttgacacagttgaacttattacgcatgtcaatg 5117295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 181 - 224
Target Start/End: Original strand, 44963489 - 44963532
Alignment:
Q  181 gtcccttaatacttgacacagttgaccttattacgcatgtcaat 224  Q
    |||||||||||||||||| |||||||||||||||||||||||||    
T  44963489 gtcccttaatacttgacatagttgaccttattacgcatgtcaat 44963532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 187 - 225
Target Start/End: Original strand, 40058790 - 40058828
Alignment:
Q  187 taatacttgacacagttgaccttattacgcatgtcaatg 225  Q
    |||||||||||||||||||||||||||||||||||||||    
T  40058790 taatacttgacacagttgaccttattacgcatgtcaatg 40058828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 187 - 225
Target Start/End: Original strand, 12685752 - 12685790
Alignment:
Q  187 taatacttgacacagttgaccttattacgcatgtcaatg 225  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  12685752 taatacttgacacagttgaccttattacacatgtcaatg 12685790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 48613888 - 48613942
Alignment:
Q  171 tactccttttgtcccttaatacttgacacagttgaccttattacgcatgtcaatg 225  Q
    |||| |||| ||||| |||||||||| |||||| |||||||||||||||||||||    
T  48613888 tacttctttcgtcccataatacttgatacagttaaccttattacgcatgtcaatg 48613942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 215
Target Start/End: Original strand, 10648006 - 10648050
Alignment:
Q  171 tactccttttgtcccttaatacttgacacagttgaccttattacg 215  Q
    |||||| ||| |||| |||||||||||||||||||||||||||||    
T  10648006 tactccctttatcccataatacttgacacagttgaccttattacg 10648050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 219
Target Start/End: Complemental strand, 6871100 - 6871062
Alignment:
Q  181 gtcccttaatacttgacacagttgaccttattacgcatg 219  Q
    ||||| ||||||||||||| |||||||||||||||||||    
T  6871100 gtcccataatacttgacacggttgaccttattacgcatg 6871062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 225
Target Start/End: Complemental strand, 48312289 - 48312235
Alignment:
Q  171 tactccttttgtcccttaatacttgacacagttgaccttattacgcatgtcaatg 225  Q
    ||||||||  ||||| |||||||| |||||||| ||||||||| |||||||||||    
T  48312289 tactccttccgtcccataatacttaacacagtttaccttattatgcatgtcaatg 48312235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 225
Target Start/End: Original strand, 10100330 - 10100374
Alignment:
Q  181 gtcccttaatacttgacacagttgaccttattacgcatgtcaatg 225  Q
    |||||||||||  ||||||||||||||| ||||||||| ||||||    
T  10100330 gtcccttaataagtgacacagttgacctaattacgcatatcaatg 10100374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 225
Target Start/End: Complemental strand, 25815779 - 25815735
Alignment:
Q  181 gtcccttaatacttgacacagttgaccttattacgcatgtcaatg 225  Q
    ||||||||||| ||||||||||||| ||||||||| || ||||||    
T  25815779 gtcccttaatagttgacacagttgatcttattacgtatctcaatg 25815735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 225
Target Start/End: Complemental strand, 47912532 - 47912488
Alignment:
Q  181 gtcccttaatacttgacacagttgaccttattacgcatgtcaatg 225  Q
    ||||| ||||||||| |||| |||||||||||||| |||||||||    
T  47912532 gtcccataatacttgccacaattgaccttattacgtatgtcaatg 47912488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 168 - 225
Target Start/End: Original strand, 45 - 102
Alignment:
Q  168 taatactccttttgtcccttaatacttgacacagttgaccttattacgcatgtcaatg 225  Q
    ||||||||| |  ||||||||||||||||||||||||||||||||||||||| |||||    
T  45 taatactccctccgtcccttaatacttgacacagttgaccttattacgcatgccaatg 102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 6)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 181 - 225
Target Start/End: Original strand, 7601209 - 7601253
Alignment:
Q  181 gtcccttaatacttgacacagttgaccttattacgcatgtcaatg 225  Q
    |||||||||||||||||||||||||| ||||||||||||||||||    
T  7601209 gtcccttaatacttgacacagttgactttattacgcatgtcaatg 7601253  T

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Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 219
Target Start/End: Original strand, 31644135 - 31644184
Alignment:
Q  170 atactccttttgtcccttaatacttgacacagttgaccttattacgcatg 219  Q
    |||||| |||| |||| |||||||||||||||||||||||||||||||||    
T  31644135 atactctttttatcccataatacttgacacagttgaccttattacgcatg 31644184  T

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Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 181 - 225
Target Start/End: Complemental strand, 2831959 - 2831915
Alignment:
Q  181 gtcccttaatacttgacacagttgaccttattacgcatgtcaatg 225  Q
    ||||| |||||||||||||||||||||||||||||||||| ||||    
T  2831959 gtcccataatacttgacacagttgaccttattacgcatgttaatg 2831915  T

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Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 225
Target Start/End: Complemental strand, 25627274 - 25627230
Alignment:
Q  181 gtcccttaatacttgacacagttgaccttattacgcatgtcaatg 225  Q
    |||||||||||||||||| |||||||||||||| ||||| |||||    
T  25627274 gtcccttaatacttgacatagttgaccttattatgcatgacaatg 25627230  T

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Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 218
Target Start/End: Original strand, 43328615 - 43328651
Alignment:
Q  182 tcccttaatacttgacacagttgaccttattacgcat 218  Q
    ||||||||||||||||||| |||||||||||||||||    
T  43328615 tcccttaatacttgacacaattgaccttattacgcat 43328651  T

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Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 194 - 225
Target Start/End: Complemental strand, 44022506 - 44022475
Alignment:
Q  194 tgacacagttgaccttattacgcatgtcaatg 225  Q
    ||||||||||||||||||||||||||||||||    
T  44022506 tgacacagttgaccttattacgcatgtcaatg 44022475  T

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Target: scaffold0172 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 181 - 225
Target Start/End: Original strand, 19548 - 19592
Alignment:
Q  181 gtcccttaatacttgacacagttgaccttattacgcatgtcaatg 225  Q
    |||| |||||||||||||||||||||||||||||| |||||||||    
T  19548 gtccattaatacttgacacagttgaccttattacgaatgtcaatg 19592  T

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Target: scaffold0289 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 225
Target Start/End: Complemental strand, 9368 - 9330
Alignment:
Q  187 taatacttgacacagttgaccttattacgcatgtcaatg 225  Q
    |||||||||| ||||||||||||||||||||| ||||||    
T  9368 taatacttgatacagttgaccttattacgcatatcaatg 9330  T

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Target: scaffold0500 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0500
Description:

Target: scaffold0500; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 225
Target Start/End: Original strand, 490 - 534
Alignment:
Q  181 gtcccttaatacttgacacagttgaccttattacgcatgtcaatg 225  Q
    ||||| |||||| |||||||||||||| ||||||| |||||||||    
T  490 gtcccataatacatgacacagttgaccctattacgtatgtcaatg 534  T

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Target: scaffold0363 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0363
Description:

Target: scaffold0363; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 225
Target Start/End: Original strand, 17722 - 17766
Alignment:
Q  181 gtcccttaatacttgacacagttgaccttattacgcatgtcaatg 225  Q
    |||| ||||||||||||||| |||| ||||||| |||||||||||    
T  17722 gtcctttaatacttgacacaattgatcttattatgcatgtcaatg 17766  T

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