View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4934-Insertion-8 (Length: 295)

Name: NF4934-Insertion-8
Description: NF4934
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4934-Insertion-8
NF4934-Insertion-8
[»] chr4 (1 HSPs)
chr4 (22-295)||(42687314-42687590)


Alignment Details
Target: chr4 (Bit Score: 246; Significance: 1e-136; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 22 - 295
Target Start/End: Complemental strand, 42687590 - 42687314
Alignment:
Q  22 ttcctaaacagaatcctctgactcttgtaaagatccctattatcttcgcccaggagataatcctgaagctacttgttacttctcctgatgaccctttccg 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42687590 ttcctaaacagaatcctctgactcttgtaaagatccctattatcttcgcccaggagataatcctgaagctacttgttacttctcctgatgaccctttccg 42687491  T
Q  122 tgatgctatcctcatttttctcaccagcacaagagctgacatatcc-tttgttgtccagaagctcaatcaacatatgtctaaccctcttaattctcatca 220  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  42687490 tgatgctatcctcatttttctcaccagcacaagaggtgacatatccttttgttgtccagcagctcaatcaacatatgtctaaccctcttaattctcatca 42687391  T
Q  221 tcatgctgcagtccatattttaagata--taaagaaaaatcctagcctaggataacttttccctgcctcgtctcctt 295  Q
    |||||||||||||||||||||||||||  | ||||||||||||||||||||||||||||||||||||||||||||||    
T  42687390 tcatgctgcagtccatattttaagatatctcaagaaaaatcctagcctaggataacttttccctgcctcgtctcctt 42687314  T

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