View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4934_low_17 (Length: 320)

Name: NF4934_low_17
Description: NF4934
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4934_low_17
NF4934_low_17
[»] chr3 (65 HSPs)
chr3 (14-298)||(15492861-15493149)
chr3 (105-297)||(44276397-44276586)
chr3 (102-267)||(39038045-39038211)
chr3 (102-297)||(10728646-10728842)
chr3 (102-297)||(37454866-37455062)
chr3 (102-234)||(40897149-40897282)
chr3 (102-298)||(11431531-11431738)
chr3 (102-234)||(52618033-52618166)
chr3 (102-225)||(44906590-44906714)
chr3 (102-297)||(50762055-50762251)
chr3 (102-269)||(6975754-6975919)
chr3 (102-252)||(10660540-10660691)
chr3 (102-297)||(17946293-17946499)
chr3 (102-297)||(34484025-34484231)
chr3 (102-297)||(52810383-52810589)
chr3 (102-298)||(36674124-36674331)
chr3 (102-228)||(23753460-23753587)
chr3 (102-234)||(26107266-26107399)
chr3 (102-234)||(48379162-48379295)
chr3 (139-297)||(39842489-39842648)
chr3 (102-297)||(53929123-53929329)
chr3 (102-234)||(51737794-51737928)
chr3 (102-234)||(20832997-20833130)
chr3 (102-234)||(31646352-31646485)
chr3 (101-196)||(12103633-12103729)
chr3 (110-297)||(6589577-6589775)
chr3 (102-297)||(19253832-19254038)
chr3 (102-297)||(20498214-20498420)
chr3 (102-234)||(54628848-54628982)
chr3 (102-234)||(6035121-6035254)
chr3 (106-234)||(32580186-32580314)
chr3 (110-234)||(55235198-55235322)
chr3 (101-294)||(33807796-33808001)
chr3 (101-234)||(29030010-29030143)
chr3 (113-297)||(10139141-10139336)
chr3 (117-297)||(18749632-18749823)
chr3 (134-269)||(27899381-27899517)
chr3 (102-297)||(996081-996287)
chr3 (102-298)||(50903234-50903444)
chr3 (121-225)||(539481-539586)
chr3 (121-297)||(3206200-3206387)
chr3 (102-297)||(3999640-3999846)
chr3 (102-165)||(18749575-18749638)
chr3 (102-269)||(40246849-40247027)
chr3 (102-234)||(1440020-1440154)
chr3 (102-265)||(51699507-51699680)
chr3 (110-282)||(54625605-54625788)
chr3 (102-297)||(25418371-25418577)
chr3 (110-297)||(35337748-35337944)
chr3 (102-297)||(37820472-37820678)
chr3 (102-197)||(52114533-52114630)
chr3 (102-234)||(33996609-33996742)
chr3 (217-297)||(6131228-6131308)
chr3 (102-225)||(5825065-5825191)
chr3 (110-297)||(29448853-29449051)
chr3 (14-101)||(30862090-30862177)
chr3 (102-297)||(44762032-44762238)
chr3 (173-258)||(52080004-52080089)
chr3 (136-247)||(23535866-23535977)
chr3 (102-138)||(27240408-27240444)
chr3 (102-149)||(6131325-6131372)
chr3 (228-297)||(45862983-45863052)
chr3 (229-269)||(12103733-12103773)
chr3 (217-257)||(22057893-22057933)
chr3 (238-298)||(32580328-32580388)
[»] chr1 (48 HSPs)
chr1 (101-258)||(5495140-5495298)
chr1 (102-297)||(38536094-38536290)
chr1 (102-297)||(38558312-38558508)
chr1 (102-297)||(48668780-48668973)
chr1 (102-224)||(49230885-49231008)
chr1 (101-298)||(6312572-6312780)
chr1 (105-297)||(45272589-45272780)
chr1 (102-234)||(46328041-46328174)
chr1 (102-298)||(51701579-51701786)
chr1 (102-228)||(18798490-18798617)
chr1 (111-297)||(29219294-29219481)
chr1 (102-297)||(29396383-29396589)
chr1 (102-234)||(25612156-25612289)
chr1 (105-297)||(48177457-48177660)
chr1 (102-297)||(15835048-15835254)
chr1 (102-234)||(28387461-28387594)
chr1 (102-295)||(35279671-35279875)
chr1 (102-298)||(9322494-9322701)
chr1 (120-262)||(47784404-47784546)
chr1 (110-297)||(50192545-50192744)
chr1 (102-297)||(9577427-9577633)
chr1 (102-294)||(21222146-21222349)
chr1 (102-165)||(8141266-8141329)
chr1 (102-297)||(19451803-19452009)
chr1 (102-297)||(49198264-49198469)
chr1 (107-269)||(45535948-45536121)
chr1 (109-297)||(28824368-28824566)
chr1 (102-234)||(730147-730281)
chr1 (101-234)||(37014708-37014842)
chr1 (102-295)||(35679125-35679329)
chr1 (135-226)||(31622535-31622626)
chr1 (110-269)||(49418091-49418261)
chr1 (102-269)||(6304275-6304454)
chr1 (102-297)||(45760004-45760211)
chr1 (136-234)||(32589021-32589120)
chr1 (101-234)||(29556102-29556236)
chr1 (102-282)||(33025511-33025693)
chr1 (111-297)||(47780719-47780916)
chr1 (102-297)||(47654346-47654553)
chr1 (102-189)||(22183369-22183457)
chr1 (173-297)||(31572192-31572326)
chr1 (102-165)||(953818-953881)
chr1 (217-263)||(48524444-48524490)
chr1 (175-248)||(955823-955896)
chr1 (145-225)||(51085837-51085918)
chr1 (242-298)||(25612307-25612363)
chr1 (116-152)||(33243312-33243348)
chr1 (116-152)||(33263485-33263521)
[»] chr4 (62 HSPs)
chr4 (101-297)||(12913228-12913425)
chr4 (102-269)||(30967332-30967500)
chr4 (105-297)||(23987222-23987415)
chr4 (102-267)||(49501546-49501712)
chr4 (102-267)||(49507611-49507777)
chr4 (121-269)||(28483923-28484071)
chr4 (101-297)||(32684003-32684189)
chr4 (105-297)||(36479237-36479429)
chr4 (105-234)||(29649735-29649865)
chr4 (102-234)||(51320926-51321059)
chr4 (102-298)||(5441409-5441616)
chr4 (102-298)||(27768061-27768268)
chr4 (102-298)||(54341149-54341356)
chr4 (102-297)||(54853463-54853669)
chr4 (102-269)||(5799982-5800151)
chr4 (102-234)||(32322096-32322229)
chr4 (102-228)||(49834887-49835014)
chr4 (102-234)||(37915832-37915965)
chr4 (102-282)||(44770863-44771055)
chr4 (102-294)||(50018256-50018449)
chr4 (170-297)||(56445350-56445477)
chr4 (102-234)||(37828470-37828603)
chr4 (102-297)||(40537155-40537346)
chr4 (102-297)||(12112950-12113156)
chr4 (102-297)||(31314737-31314929)
chr4 (102-297)||(1112898-1113104)
chr4 (102-269)||(22202020-22202198)
chr4 (102-297)||(25331136-25331342)
chr4 (102-183)||(20021349-20021430)
chr4 (105-225)||(28370932-28371053)
chr4 (102-297)||(41881077-41881284)
chr4 (110-297)||(39479350-39479550)
chr4 (102-297)||(46635643-46635843)
chr4 (105-269)||(41725133-41725305)
chr4 (102-282)||(55302848-55303039)
chr4 (102-297)||(34228578-34228784)
chr4 (218-297)||(36727945-36728023)
chr4 (102-234)||(9163081-9163214)
chr4 (107-297)||(30009672-30009873)
chr4 (109-218)||(39307337-39307447)
chr4 (102-234)||(28541703-28541836)
chr4 (109-282)||(32950846-32951030)
chr4 (102-234)||(37046519-37046653)
chr4 (109-234)||(25446062-25446188)
chr4 (102-234)||(19740976-19741109)
chr4 (217-298)||(48261258-48261339)
chr4 (102-225)||(7007379-7007503)
chr4 (217-297)||(24736466-24736546)
chr4 (110-216)||(23464968-23465075)
chr4 (109-259)||(41581823-41581982)
chr4 (121-269)||(1044831-1044990)
chr4 (217-297)||(8711997-8712077)
chr4 (121-297)||(42786708-42786895)
chr4 (102-165)||(24131110-24131173)
chr4 (102-164)||(11090354-11090416)
chr4 (109-234)||(53275851-53275977)
chr4 (217-297)||(24130976-24131057)
chr4 (135-225)||(3436631-3436722)
chr4 (210-297)||(11090428-11090515)
chr4 (102-144)||(29855686-29855728)
chr4 (135-234)||(25504707-25504807)
chr4 (173-225)||(27454155-27454207)
[»] chr8 (37 HSPs)
chr8 (102-294)||(18305968-18306161)
chr8 (102-297)||(7466341-7466537)
chr8 (105-297)||(32497534-32497727)
chr8 (102-297)||(16362202-16362398)
chr8 (102-297)||(41479103-41479299)
chr8 (102-228)||(31623701-31623828)
chr8 (102-297)||(42305789-42305985)
chr8 (102-224)||(19717958-19718081)
chr8 (102-297)||(39467462-39467668)
chr8 (102-234)||(26856072-26856206)
chr8 (102-298)||(14782128-14782335)
chr8 (102-298)||(44725803-44726010)
chr8 (102-297)||(9288451-9288657)
chr8 (121-297)||(37857144-37857321)
chr8 (102-228)||(4031331-4031458)
chr8 (102-224)||(18958804-18958927)
chr8 (102-234)||(10295448-10295581)
chr8 (102-297)||(4403113-4403319)
chr8 (102-297)||(10392231-10392437)
chr8 (102-297)||(26374424-26374630)
chr8 (102-297)||(2704813-2705019)
chr8 (102-297)||(24501807-24502013)
chr8 (109-297)||(42938111-42938310)
chr8 (102-297)||(43959664-43959859)
chr8 (102-297)||(5576614-5576821)
chr8 (102-226)||(32711357-32711482)
chr8 (102-297)||(39189810-39190013)
chr8 (110-297)||(7506893-7507091)
chr8 (102-297)||(42735271-42735477)
chr8 (109-297)||(42937366-42937563)
chr8 (102-234)||(43166757-43166890)
chr8 (134-225)||(4950092-4950183)
chr8 (102-297)||(23115163-23115368)
chr8 (176-224)||(9770497-9770545)
chr8 (102-165)||(9770954-9771017)
chr8 (228-297)||(10295374-10295443)
chr8 (154-234)||(13478317-13478397)
[»] chr7 (58 HSPs)
chr7 (101-297)||(40460711-40460908)
chr7 (102-269)||(19251539-19251707)
chr7 (102-297)||(44121904-44122100)
chr7 (102-298)||(509656-509853)
chr7 (102-234)||(33382637-33382770)
chr7 (102-258)||(46405474-46405631)
chr7 (102-297)||(9179880-9180076)
chr7 (102-269)||(37327927-37328095)
chr7 (102-298)||(39784099-39784306)
chr7 (105-267)||(33892284-33892447)
chr7 (102-234)||(9882303-9882436)
chr7 (102-264)||(3797093-3797257)
chr7 (105-297)||(8675336-8675539)
chr7 (102-298)||(23101298-23101505)
chr7 (102-269)||(39028097-39028265)
chr7 (102-234)||(18838389-18838522)
chr7 (102-298)||(28342347-28342554)
chr7 (102-267)||(29585515-29585680)
chr7 (102-234)||(3022926-3023059)
chr7 (102-234)||(29614831-29614964)
chr7 (102-225)||(7993142-7993266)
chr7 (102-228)||(17001096-17001223)
chr7 (102-248)||(44623329-44623476)
chr7 (102-234)||(28034872-28035005)
chr7 (102-225)||(32883782-32883906)
chr7 (102-297)||(12893415-12893621)
chr7 (102-297)||(40996643-40996849)
chr7 (150-297)||(43187351-43187509)
chr7 (102-297)||(43581084-43581290)
chr7 (102-223)||(44256844-44256966)
chr7 (105-228)||(47066706-47066831)
chr7 (102-234)||(12963701-12963834)
chr7 (102-297)||(10068466-10068673)
chr7 (102-297)||(973191-973397)
chr7 (115-297)||(7718356-7718549)
chr7 (102-223)||(10676498-10676620)
chr7 (109-297)||(7719254-7719453)
chr7 (110-297)||(34695288-34695486)
chr7 (107-297)||(18914729-18914930)
chr7 (107-269)||(727524-727688)
chr7 (102-225)||(12740373-12740496)
chr7 (102-297)||(30440803-30441009)
chr7 (102-297)||(47914273-47914479)
chr7 (176-298)||(19810874-19810996)
chr7 (110-297)||(20275257-20275455)
chr7 (102-165)||(29893081-29893144)
chr7 (102-297)||(44343390-44343596)
chr7 (107-247)||(31638887-31639028)
chr7 (102-297)||(47879175-47879381)
chr7 (102-185)||(41827314-41827398)
chr7 (135-297)||(39219371-39219543)
chr7 (109-234)||(34009026-34009153)
chr7 (101-225)||(1470309-1470433)
chr7 (109-165)||(10616955-10617011)
chr7 (109-297)||(32142911-32143112)
chr7 (102-149)||(48117746-48117793)
chr7 (217-269)||(37972889-37972941)
chr7 (217-297)||(41827430-41827510)
[»] chr5 (24 HSPs)
chr5 (102-297)||(4240456-4240652)
chr5 (102-297)||(5949115-5949310)
chr5 (102-297)||(1461142-1461338)
chr5 (102-297)||(40013706-40013902)
chr5 (105-269)||(22746306-22746473)
chr5 (102-234)||(1152170-1152303)
chr5 (102-234)||(4550324-4550457)
chr5 (102-234)||(7947640-7947773)
chr5 (102-234)||(13925937-13926070)
chr5 (102-298)||(14000098-14000305)
chr5 (102-228)||(37013920-37014047)
chr5 (105-297)||(9220711-9220904)
chr5 (102-297)||(21147073-21147279)
chr5 (102-225)||(14465303-14465427)
chr5 (101-297)||(27458944-27459150)
chr5 (109-297)||(33656035-33656234)
chr5 (102-297)||(7016733-7016939)
chr5 (102-215)||(139279-139393)
chr5 (123-297)||(39852372-39852557)
chr5 (102-267)||(5272943-5273119)
chr5 (121-269)||(849172-849331)
chr5 (102-234)||(32157964-32158098)
chr5 (102-234)||(6460798-6460931)
chr5 (134-225)||(9689696-9689787)
[»] scaffold0306 (1 HSPs)
scaffold0306 (102-297)||(13888-14084)
[»] scaffold0152 (1 HSPs)
scaffold0152 (102-297)||(21243-21439)
[»] chr2 (32 HSPs)
chr2 (102-297)||(28740290-28740486)
chr2 (102-267)||(10125327-10125495)
chr2 (102-265)||(7026611-7026775)
chr2 (102-269)||(13833457-13833625)
chr2 (105-297)||(3463682-3463875)
chr2 (102-234)||(33135630-33135763)
chr2 (108-234)||(10657419-10657546)
chr2 (102-228)||(6224623-6224751)
chr2 (102-234)||(28844562-28844695)
chr2 (102-225)||(25288166-25288290)
chr2 (110-228)||(3574862-3574981)
chr2 (102-234)||(18177274-18177407)
chr2 (102-297)||(20605243-20605449)
chr2 (102-297)||(24776362-24776568)
chr2 (102-297)||(31170621-31170827)
chr2 (120-297)||(378962-379140)
chr2 (102-234)||(26788791-26788926)
chr2 (102-297)||(16269698-16269904)
chr2 (107-297)||(14198574-14198775)
chr2 (102-251)||(26601253-26601403)
chr2 (102-189)||(215340-215428)
chr2 (102-297)||(12407387-12407593)
chr2 (102-297)||(22551760-22551966)
chr2 (102-297)||(43847653-43847859)
chr2 (102-234)||(44765782-44765915)
chr2 (102-269)||(35317069-35317247)
chr2 (109-295)||(305464-305661)
chr2 (102-297)||(5093044-5093250)
chr2 (102-234)||(1789449-1789582)
chr2 (217-297)||(9120259-9120339)
chr2 (103-223)||(21370631-21370752)
chr2 (105-165)||(19145036-19145095)
[»] chr6 (18 HSPs)
chr6 (102-297)||(30385063-30385257)
chr6 (102-298)||(31895701-31895908)
chr6 (102-269)||(34759072-34759251)
chr6 (102-234)||(14262500-14262633)
chr6 (102-234)||(34773414-34773547)
chr6 (102-297)||(6197472-6197678)
chr6 (173-298)||(31067570-31067695)
chr6 (102-297)||(2300732-2300938)
chr6 (102-234)||(7051850-7051983)
chr6 (102-297)||(29076603-29076810)
chr6 (120-234)||(7497099-7497214)
chr6 (102-297)||(29111576-29111784)
chr6 (110-297)||(1391637-1391835)
chr6 (207-298)||(4200430-4200521)
chr6 (109-226)||(3848224-3848340)
chr6 (109-234)||(28002677-28002803)
chr6 (114-196)||(656982-657065)
chr6 (62-104)||(22628483-22628525)
[»] scaffold1504 (1 HSPs)
scaffold1504 (102-297)||(869-1075)
[»] scaffold0110 (1 HSPs)
scaffold0110 (102-234)||(39685-39818)
[»] scaffold0922 (1 HSPs)
scaffold0922 (102-225)||(4206-4330)
[»] scaffold0543 (1 HSPs)
scaffold0543 (102-297)||(10566-10772)
[»] scaffold0400 (1 HSPs)
scaffold0400 (102-297)||(15028-15234)
[»] scaffold0365 (1 HSPs)
scaffold0365 (102-297)||(15671-15877)
[»] scaffold0037 (1 HSPs)
scaffold0037 (102-297)||(100217-100423)
[»] scaffold0151 (1 HSPs)
scaffold0151 (121-297)||(38600-38786)
[»] scaffold0004 (1 HSPs)
scaffold0004 (102-267)||(102099-102277)
[»] scaffold0347 (1 HSPs)
scaffold0347 (201-269)||(14876-14944)
[»] scaffold0113 (1 HSPs)
scaffold0113 (102-297)||(38890-39096)
[»] scaffold0010 (3 HSPs)
scaffold0010 (102-165)||(233743-233806)
scaffold0010 (102-165)||(234591-234654)
scaffold0010 (105-165)||(222578-222638)
[»] scaffold0042 (1 HSPs)
scaffold0042 (118-234)||(58144-58262)
[»] scaffold0054 (3 HSPs)
scaffold0054 (217-269)||(36930-36982)
scaffold0054 (174-234)||(36975-37035)
scaffold0054 (102-141)||(37027-37066)
[»] scaffold0276 (1 HSPs)
scaffold0276 (102-196)||(645-740)


Alignment Details
Target: chr3 (Bit Score: 224; Significance: 1e-123; HSPs: 65)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 14 - 298
Target Start/End: Complemental strand, 15493149 - 15492861
Alignment:
Q  14 cacatcatccttcaacaattctcaacacaccattgcaaggtccccatgtgttgaaagccacattcaacacctccattgcacttggtctaagactctttgt 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15493149 cacatcatccttcaacaattctcaacacaccattgcaaggtccccatgtgttgaaagccacattcaacacctccattgcacttggtctaagactctttgt 15493050  T
Q  114 cattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaatgtctcatggtattcaaaatcatttaaattt----ctaaaaattattt 209  Q
    |||||||||||||| |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||     ||| ||||||||    
T  15493049 cattttaaaaaagtcttgaggtattcaatcaaaacttttcatcacttaaaaatgtctcatggtattcaaaatcattcaaatttttaattaagaattattt 15492950  T
Q  210 aataaattggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggattgttttta 298  Q
    |||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| ||||| |||||| ||| |||||||||||    
T  15492949 aataaattggattttgtaggatattctagtgaaattttaacaagaaaaaatctttcatgaagtcataagatttcttgagattgttttta 15492861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 105 - 297
Target Start/End: Original strand, 44276397 - 44276586
Alignment:
Q  105 actctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaat-gtctcatggtattcaaaatcatttaaatttctaaaaa 203  Q
    ||||||||||||||||||||||| |||| |||||||||||||| |||||||||||||||||  ||||||||||||||||||||||| |||||    |  |    
T  44276397 actctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcacttaaaaaaagtctcatggtattcaaaatcattcaaatt----agga 44276492  T
Q  204 ttatttaataaattggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggattgttttt 297  Q
    || |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| | |||||||||| |||||||| |||||    
T  44276493 ttgtttaataaattggattttgtgggattttctagtgaaattttaacaagaaaaaatctttcatgaagacatgagattttttgggattattttt 44276586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 102 - 267
Target Start/End: Original strand, 39038045 - 39038211
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||| ||||  |||||| |||||||||| ||||||| ||    
T  39038045 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcactttaaaaaagtcttgtggtatccaaaatcattcaaatttcgaa 39038144  T
Q  201 aaattatttaataaattggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcat 267  Q
     |||| |||||||||||||||||||  ||||||| | ||| ||||||||||||||||| ||||||||    
T  39038145 gaattgtttaataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtctttcat 39038211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 102 - 297
Target Start/End: Complemental strand, 10728842 - 10728646
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactta-aaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| |||| ||||  ||||||| ||||||||| ||||||  ||    
T  10728842 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttacaaaaagtcttgtggtatttaaaatcattcaaatttggaa 10728743  T
Q  201 aaattatttaataaattggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggattgttttt 297  Q
      ||| |||||||||||||||||||  ||||||| | ||| ||||||||||||||||| ||||||||||    ||||||||| ||| ||||||||||    
T  10728742 ggattgtttaataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 10728646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 102 - 297
Target Start/End: Original strand, 37454866 - 37455062
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaat-gtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||| ||||||||||||||||||||| ||||  ||||||||||||||||||||||| |||||||  ||||  ||||||||||||||||| ||||||| ||    
T  37454866 aagattctttgtcattttaaaaaagtcttgagatattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaa 37454965  T
Q  201 aaattatttaataaattggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggattgttttt 297  Q
      ||| |||||||||||| ||||||| ||||||| | ||| ||||||||||||||||| | ||||||||    ||||||||| ||| ||||||||||    
T  37454966 tgattgtttaataaattgaattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttcttgagattgttttt 37455062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 102 - 234
Target Start/End: Original strand, 40897149 - 40897282
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||| |||| |||||||||||||||||| ||||||| ||    
T  40897149 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttatggtattcaaaatcattcaaatttcgaa 40897248  T
Q  201 aaattatttaataaattggattttgtaggatttt 234  Q
      ||| |||||||||||||||||||  |||||||    
T  40897249 ggattgtttaataaattggattttgatggatttt 40897282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 102 - 298
Target Start/End: Original strand, 11431531 - 11431738
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||||||||||| || ||||| ||||  ||||||||||||||||||||||||| ||    
T  11431531 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcatttaaatttcgaa 11431630  T
Q  201 aaattatttaataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggat 290  Q
      ||| ||||||||||          |||||||||| ||||||| | ||| ||||||||||||||||| ||||||||||    ||||||||| ||| |||    
T  11431631 ggattgtttaataaattggattttggtggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagat 11431730  T
Q  291 tgttttta 298  Q
    ||||||||    
T  11431731 tgttttta 11431738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 102 - 234
Target Start/End: Complemental strand, 52618166 - 52618033
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactta-aaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| |||| ||||  ||||||||||||||||| ||||||| ||    
T  52618166 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaa 52618067  T
Q  201 aaattatttaataaattggattttgtaggatttt 234  Q
      ||| |||||||||||||||||||  |||||||    
T  52618066 ggattgtttaataaattggattttgatggatttt 52618033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 102 - 225
Target Start/End: Complemental strand, 44906714 - 44906590
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactta-aaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| |||| ||||  ||||||||||||||||| ||||||| ||    
T  44906714 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaa 44906615  T
Q  201 aaattatttaataaattggattttg 225  Q
      ||| |||||||||||||||||||    
T  44906614 ggattgtttaataaattggattttg 44906590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 102 - 297
Target Start/End: Complemental strand, 50762251 - 50762055
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaat-gtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||||||||||||||||||||||||| ||||  |||||||||| |||||||||| | |||||||  ||||  |||||||||||||||||  |||||| ||    
T  50762251 aagactctttgtcattttaaaaaagtcttgagatattcaatcatgacttttcataatttaaaaaaagtcttgtggtattcaaaatcattctaatttcgaa 50762152  T
Q  201 aaattatttaataaattggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggattgttttt 297  Q
      ||| ||| |||||||||||||||  ||||||| | ||| ||||||||||||||||| ||||||||||    ||||||||| ||| ||||||||||    
T  50762151 tgattgtttgataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 50762055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 102 - 269
Target Start/End: Original strand, 6975754 - 6975919
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaatgtctcatggtattcaaaatcatttaaatttctaaa 201  Q
    |||||||||||| |||||||||| || |||| |||||||||||||||||||||||| ||||||| ||||  ||||||||||||||||| ||||||| ||     
T  6975754 aagactctttgttattttaaaaa-gtcttgaggtattcaatcaagacttttcatcatttaaaaa-gtcttgtggtattcaaaatcattcaaatttcgaag 6975851  T
Q  202 aattatttaataaattggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatga 269  Q
    ||||||||| ||||||||| ||||| ||||||||| || |||||| | || |||| | ||||||||||    
T  6975852 aattatttactaaattggaatttgtgggattttctagtaaaatttgagcatgaaacagtctttcatga 6975919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 102 - 252
Target Start/End: Original strand, 10660540 - 10660691
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaat-gtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||||  || |  ||||||||||||||||| ||||||| ||    
T  10660540 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtattgtggtattcaaaatcattcaaatttcgaa 10660639  T
Q  201 aaattatttaataaattggattttgtaggattttcttgtgaaattttaacaa 252  Q
      ||| |||||||||||||||||||  ||||||| | ||| |||||||||||    
T  10660640 ggattgtttaataaattggattttgatggattttgtagtgtaattttaacaa 10660691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 102 - 297
Target Start/End: Original strand, 17946293 - 17946499
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||| ||||||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||| ||||| || |||||||||||||| ||||||| ||    
T  17946293 aagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtgatattcaaaatcattcaaatttcaaa 17946392  T
Q  201 aaattatttaataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggat 290  Q
      ||| ||||||||||          |||||||||| ||||||| | ||| ||||||||||||||||| ||||||||||    ||||||||| ||| |||    
T  17946393 ggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagat 17946492  T
Q  291 tgttttt 297  Q
    |||||||    
T  17946493 tgttttt 17946499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 102 - 297
Target Start/End: Complemental strand, 34484231 - 34484025
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaat-gtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||||  || |  ||||||||||||||||| ||||||| ||    
T  34484231 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagttttgtggtattcaaaatcattcaaatttcgaa 34484132  T
Q  201 aaattatttaataaattggat----------tttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggat 290  Q
      ||| |||||||||||||||          ||||| ||||||| | ||| ||||||||||||||||||||||||||||    ||||||||| ||| |||    
T  34484131 ggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaagatgagatttcttgagat 34484032  T
Q  291 tgttttt 297  Q
    |||||||    
T  34484031 tgttttt 34484025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 102 - 297
Target Start/End: Original strand, 52810383 - 52810589
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| || ||||| ||||  ||||||||||||||||| ||||||  ||    
T  52810383 aagactctttgtcattttaaaaaagttttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaattttgaa 52810482  T
Q  201 aaattatttaataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggat 290  Q
      ||| ||||||||||          |||||||||| ||||||| | | | ||||||||||||||||||||||||||||    ||||||||| ||| |||    
T  52810483 tgattgtttaataaattgaattttgatggattttgtgggattttgtagcgtaattttaacaagaaaaaatctttcatgaaaagatgagatttcttgagat 52810582  T
Q  291 tgttttt 297  Q
    |||||||    
T  52810583 tgttttt 52810589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 102 - 298
Target Start/End: Complemental strand, 36674331 - 36674124
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||||||||||| || ||||| ||||  ||||||||||||||||| ||||||  ||    
T  36674331 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaattttgaa 36674232  T
Q  201 aaattatttaataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggat 290  Q
      ||| ||||||||||          |||||||||| ||||||| | ||| ||||||||||||||||| ||||||||||    ||||||||| ||| |||    
T  36674231 ggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagat 36674132  T
Q  291 tgttttta 298  Q
    ||||||||    
T  36674131 tgttttta 36674124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 102 - 228
Target Start/End: Complemental strand, 23753587 - 23753460
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||| ||||||||||||||||||||| |||| |||||||||||||||||||||||| || ||||| ||||  ||||||||||||||||| ||||||| ||    
T  23753587 aagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaa 23753488  T
Q  201 aaattatttaataaattggattttgtag 228  Q
      ||| ||||||||||||||||||||||    
T  23753487 ggattgtttaataaattggattttgtag 23753460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 102 - 234
Target Start/End: Original strand, 26107266 - 26107399
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||| ||||||||||||||||||||| |||| |||||||||||||||||||||||| || ||||| ||||  ||||||||||||||||| ||||||| ||    
T  26107266 aagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcaattaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaa 26107365  T
Q  201 aaattatttaataaattggattttgtaggatttt 234  Q
      ||| |||||||||||||||||||  |||||||    
T  26107366 ggattgtttaataaattggattttgatggatttt 26107399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 102 - 234
Target Start/End: Original strand, 48379162 - 48379295
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||||||||||||||||||||||||| |||| |||||||||| |||||||||||||||| ||||| ||||  ||||||||||||||||| ||||||| ||    
T  48379162 aagactctttgtcattttaaaaaagtcttgaggtattcaatctagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaa 48379261  T
Q  201 aaattatttaataaattggattttgtaggatttt 234  Q
      ||| |||||||||||| ||||||  |||||||    
T  48379262 ggattgtttaataaattgaattttgatggatttt 48379295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 139 - 297
Target Start/End: Complemental strand, 39842648 - 39842489
Alignment:
Q  139 caatcaagacttttcatcacttaaaaat-gtctcatggtattcaaaatcatttaaatttctaaaaattatttaataaattggattttgtaggattttctt 237  Q
    ||||||||| |||||||||||||||||  ||||| || |||||||||||||| ||||||| || |||| ||||||||||| |||||||  ||||||| |     
T  39842648 caatcaagatttttcatcacttaaaaaaagtctcgtgatattcaaaatcattcaaatttcgaagaattgtttaataaattagattttgacggattttgta 39842549  T
Q  238 gtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggattgttttt 297  Q
     || ||||||||||||||||| ||||||||||    ||||||||| ||||||||||||||    
T  39842548 atgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgggattgttttt 39842489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 102 - 297
Target Start/End: Complemental strand, 53929329 - 53929123
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactta-aaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||| |||||||||||| |||||||| |||  |||||||||||||||| || |||||||| |||| ||||  |||||||||||||||||||||| || ||    
T  53929329 aagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcatttaaatatcgaa 53929230  T
Q  201 aaattatttaataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggat 290  Q
      ||| ||||||||||          |||||||||||||||||||| ||||||||||| || |||||||||||| ||||   |||||||||| || ||||    
T  53929229 cgattgtttaataaataagattttgatggattttgtaggattttctagtgaaattttagcatgaaaaaatctttaatgaaaacatgagattttttaggat 53929130  T
Q  291 tgttttt 297  Q
    |||||||    
T  53929129 tgttttt 53929123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 102 - 234
Target Start/End: Complemental strand, 51737928 - 51737794
Alignment:
Q  102 aagactctttgtcattttaaaaaa-gttttgatgtattcaatcaagacttttcatcactta-aaaatgtctcatggtattcaaaatcatttaaatttcta 199  Q
    |||||||||| ||||||||||||| || |||| |||||||||||||||||||||||||||| |||| ||||  ||||||||||||||||| ||||||| |    
T  51737928 aagactctttatcattttaaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcga 51737829  T
Q  200 aaaattatttaataaattggattttgtaggatttt 234  Q
    |  ||| |||||||||||||||||||  |||||||    
T  51737828 aggattgtttaataaattggattttgatggatttt 51737794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 102 - 234
Target Start/End: Original strand, 20832997 - 20833130
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||||||||||||||||||||||||| |||| |||||||||||||| |||||||||||| ||||| ||||  ||||||||||||||||| |||||   ||    
T  20832997 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagaattttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaattcggaa 20833096  T
Q  201 aaattatttaataaattggattttgtaggatttt 234  Q
      ||| |||||||||||||||||||  |||||||    
T  20833097 ggattgtttaataaattggattttgatggatttt 20833130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 102 - 234
Target Start/End: Complemental strand, 31646485 - 31646352
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaatg-tctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||||||||||| ||||||||||||| |||| |||||||||||||||||||||||| |||||||   |||  ||||||||||||||||| ||||||| ||    
T  31646485 aagactctttgttattttaaaaaagtcttgacgtattcaatcaagacttttcatcatttaaaaaaaatcttgtggtattcaaaatcattcaaatttcgaa 31646386  T
Q  201 aaattatttaataaattggattttgtaggatttt 234  Q
    | ||| |||||| ||||||||||||  |||||||    
T  31646385 agattgtttaatgaattggattttgatggatttt 31646352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 101 - 196
Target Start/End: Original strand, 12103633 - 12103729
Alignment:
Q  101 taagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaattt 196  Q
    ||||| ||||||||||||||||||||| |||| |||||||||||||| |||||||||||| ||||| ||||||||||||||||||||||| ||||||    
T  12103633 taagattctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcacttaaaaaaagtctcatggtattcaaaatcattcaaattt 12103729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 110 - 297
Target Start/End: Original strand, 6589577 - 6589775
Alignment:
Q  110 ttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaat-gtctcatggtattcaaaatcatttaaatttctaaaaattatt 208  Q
    ||||||||| |||||||| |||  |||||||||||||||| || |||| |||||||  ||||  ||||||||||||||||| ||||||| || |||||||    
T  6589577 ttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcatttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaagaattatt 6589676  T
Q  209 taataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggattgttttt 297  Q
    ||||||||          |||||||||| ||||||||| ||||||||||| || |||||| ||||||||||   |||||||||| || |||||||||||    
T  6589677 taataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgttttt 6589775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 102 - 297
Target Start/End: Original strand, 19253832 - 19254038
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||| |||||||||||| |||||||| |||  |||||||||||||||| || ||||||| ||||| ||||  ||||||||||||||||| ||||||| ||    
T  19253832 aagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaa 19253931  T
Q  201 aaattatttaataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggat 290  Q
      ||| ||||||||||          |||||||||| ||||||||| ||||||||||| || |||||| ||||||||||   |||||||||| || ||||    
T  19253932 ggattgtttaataaataagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggat 19254031  T
Q  291 tgttttt 297  Q
    |||||||    
T  19254032 tgttttt 19254038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 102 - 297
Target Start/End: Original strand, 20498214 - 20498420
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||| |||||||||||| |||||||| |||  |||||||||||||||| || ||||||| ||||| ||||  ||||||||||||||||| ||||||| ||    
T  20498214 aagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaa 20498313  T
Q  201 aaattatttaataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggat 290  Q
      ||| ||||||||||          |||||||||| ||||||||| ||||||||||| || |||||| ||||||||||   |||||||||| || ||||    
T  20498314 ggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggat 20498413  T
Q  291 tgttttt 297  Q
    |||||||    
T  20498414 tgttttt 20498420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 102 - 234
Target Start/End: Original strand, 54628848 - 54628982
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcac--ttaaaaatgtctcatggtattcaaaatcatttaaatttcta 199  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||    |||||  |||  ||||||||||||||||| ||||||| |    
T  54628848 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacaaaaaaaaaaatcttgtggtattcaaaatcattcaaatttcaa 54628947  T
Q  200 aaaattatttaataaattggattttgtaggatttt 234  Q
    |  ||| |||||||||||||||||||  |||||||    
T  54628948 aggattgtttaataaattggattttgatggatttt 54628982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 102 - 234
Target Start/End: Complemental strand, 6035254 - 6035121
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactta-aaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||| ||||||||||||||||||||| |||| |||||||||||||| ||||||||||||| |||| ||||| || |||||||||||||| ||||||| ||    
T  6035254 aagagtctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcacttaaaaaaagtctcgtgatattcaaaatcattcaaatttcgaa 6035155  T
Q  201 aaattatttaataaattggattttgtaggatttt 234  Q
      | | ||||||||||| |||||||  |||||||    
T  6035154 gcaatgtttaataaattagattttgatggatttt 6035121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 106 - 234
Target Start/End: Original strand, 32580186 - 32580314
Alignment:
Q  106 ctctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaat-gtctcatggtattcaaaatcatttaaatttctaaaaat 204  Q
    |||||||||||||||||||||| |||| ||||||||| |||||||||||||| |||||||  ||||  ||||||||||||||||| ||||||| ||  ||    
T  32580186 ctctttgtcattttaaaaaagtcttgaggtattcaat-aagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggat 32580284  T
Q  205 tatttaataaattggattttgtaggatttt 234  Q
    | |||||||||||||||||||  |||||||    
T  32580285 tgtttaataaattggattttgatggatttt 32580314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 110 - 234
Target Start/End: Original strand, 55235198 - 55235322
Alignment:
Q  110 ttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaatgtctcatggtattcaaaatcatttaaatttctaaaaattattt 209  Q
    ||||||||||||||||||   || |||||||||||| ||| ||||||| ||||||| |||||||| |||||||||||||| ||||||| ||| ||| |||    
T  55235198 ttgtcattttaaaaaagtcacgaggtattcaatcaaaactcttcatcaattaaaaaagtctcatgatattcaaaatcattcaaatttcgaaagattgttt 55235297  T
Q  210 aataaattggattttgtaggatttt 234  Q
    |||||||||| |||||  |||||||    
T  55235298 aataaattggtttttgatggatttt 55235322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 101 - 294
Target Start/End: Complemental strand, 33808001 - 33807796
Alignment:
Q  101 taagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactta--aaaatgtctcatggtattcaaaatcatttaaatttct 198  Q
    ||||| |||||||||||| |||||||| |||  |||||||||||||||| || ||||||||  |||| ||||  ||||||||||||||||| |||||||     
T  33808001 taagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtctagtggtattcaaaatcattcaaatttcg 33807902  T
Q  199 aaaaattatttaataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattggg 288  Q
    ||  ||| ||||||||||          |||||||||| ||||||||| ||||||||||| || |||||| ||||||||||   |||||||||| || ||    
T  33807901 aaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttagg 33807802  T
Q  289 attgtt 294  Q
    ||||||    
T  33807801 attgtt 33807796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 101 - 234
Target Start/End: Original strand, 29030010 - 29030143
Alignment:
Q  101 taagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||||||||||||||||| |||||||| |||  |||||||||||||||| || |||||||||||| ||||  ||||||||||||||||| ||||||  ||    
T  29030010 taagactctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaagtcttgtggtattcaaaatcattcaaattttgaa 29030109  T
Q  201 aaattatttaataaattggattttgtaggatttt 234  Q
      ||| ||||||||||  |||||||  |||||||    
T  29030110 ggattgtttaataaatcagattttgatggatttt 29030143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 113 - 297
Target Start/End: Complemental strand, 10139336 - 10139141
Alignment:
Q  113 tcattttaaaaaagttttgatgtattcaatcaagacttttcatcactta-aaaatgtctcatggtattcaaaatcatttaaatttctaaaaattatttaa 211  Q
    |||||| |||||||| |||  |||||||||||||||| || |||||||| |||| ||||  ||||||||||||||||| ||||||| ||  ||| |||||    
T  10139336 tcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaa 10139237  T
Q  212 taaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggattgttttt 297  Q
    |||||          |||||||||| ||||||||| ||||||||||| || |||||| ||||||||||   |||||||||| || |||||||||||    
T  10139236 taaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgttttt 10139141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 117 - 297
Target Start/End: Original strand, 18749632 - 18749823
Alignment:
Q  117 tttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaat-gtctcatggtattcaaaatcatttaaatttctaaaaattatttaataaa 215  Q
    ||||||||||| |||| ||||||||| || |||||||||||||||||||  ||||  ||||||||||||||||| ||||||| ||  ||| |||||||||    
T  18749632 tttaaaaaagtcttgaggtattcaataaaaacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaa 18749731  T
Q  216 t----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggattgttttt 297  Q
    |          |||||||||| ||||||| | ||| ||||||||||||||||| ||||||||||    ||||||||| ||| ||||||||||    
T  18749732 ttggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 18749823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 134 - 269
Target Start/End: Original strand, 27899381 - 27899517
Alignment:
Q  134 gtattcaatcaagacttttcatcacttaaaaat-gtctcatggtattcaaaatcatttaaatttctaaaaattatttaataaattggattttgtaggatt 232  Q
    |||||||||||||||| ||  ||| |||||||  ||||  ||||||||||||||||| ||||||| ||  ||| ||||||||||  ||||||||||||||    
T  27899381 gtattcaatcaagactctttgtcatttaaaaaaagtctggtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgtaggatt 27899480  T
Q  233 ttcttgtgaaattttaacaagaaaaaatctttcatga 269  Q
    |||| ||||||||||| || |||||| ||||||||||    
T  27899481 ttctagtgaaattttagcatgaaaaagtctttcatga 27899517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 102 - 297
Target Start/End: Complemental strand, 996287 - 996081
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactta-aaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||| ||||| |||||| |||||||| |||  |||||||||||||| | || |||||||| |||| ||||  ||||||||||||||||| ||||||| ||    
T  996287 aagattctttatcatttcaaaaaagtcttgtggtattcaatcaagattcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaa 996188  T
Q  201 aaattatttaataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggat 290  Q
      ||| ||||||||||          |||||||||| ||||||||| ||||||||||| || |||||| ||||||||||   |||||||||| || ||||    
T  996187 ggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggat 996088  T
Q  291 tgttttt 297  Q
    |||||||    
T  996087 tgttttt 996081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 102 - 298
Target Start/End: Complemental strand, 50903444 - 50903234
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaat----gtctcatggtattcaaaatcatttaaatttc 197  Q
    |||||||||||||||||||||||||| || | ||||||||||||||||||| |||| |||||||     ||||  ||||||||||||||||| |||||      
T  50903444 aagactctttgtcattttaaaaaagtcttaaggtattcaatcaagactttttatcatttaaaaaaaaaagtcttgtggtattcaaaatcattcaaattaa 50903345  T
Q  198 taaaaattatttaataaattggat----------tttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgg 287  Q
     ||  ||| |||||||||||||||          ||||| ||||||| | ||| ||||||||||||||||||||||| ||||    ||||||||| |||     
T  50903344 gaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatcttttatgaaaatatgagatttcttga 50903245  T
Q  288 gattgttttta 298  Q
    |||||||||||    
T  50903244 gattgttttta 50903234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 121 - 225
Target Start/End: Complemental strand, 539586 - 539481
Alignment:
Q  121 aaaaagttttgatgtattcaatcaagacttttcatcacttaaaaat-gtctcatggtattcaaaatcatttaaatttctaaaaattatttaataaattgg 219  Q
    ||||||| |||| |||||||||||||| ||||||||| |||||||  ||||  ||||||||||||||||| ||||||| ||  |||||||||||||||||    
T  539586 aaaaagtcttgaggtattcaatcaagatttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattatttaataaattgg 539487  T
Q  220 attttg 225  Q
    ||||||    
T  539486 attttg 539481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 121 - 297
Target Start/End: Complemental strand, 3206387 - 3206200
Alignment:
Q  121 aaaaagttttgatgtattcaatcaagacttttcatcacttaaaaat-gtctcatggtattcaaaatcatttaaatttctaaaaattatttaataaat--- 216  Q
    ||||||| |||  |||||||||||||||| || ||||||||||||  ||||  ||||||||||||||||| ||||||| ||  ||| ||||||||||       
T  3206387 aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcag 3206288  T
Q  217 -------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggattgttttt 297  Q
           |||||||||| ||||||||| ||||||||||| ||||||||| ||||||||||   |||||||||| ||  ||||||||||    
T  3206287 attttgatggattttgtgggattttctagtgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttatgattgttttt 3206200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 102 - 297
Target Start/End: Complemental strand, 3999846 - 3999640
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaatg-tctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||| |||||||||||| |||||||| |||  |||||||||||||||| || ||||||||||||   |||  ||||||||||||||||| ||||||| ||    
T  3999846 aagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatctagtggtattcaaaatcattcaaatttcgaa 3999747  T
Q  201 aaattatttaataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggat 290  Q
      ||| ||||||||||          |||||||||| ||||||||| |||||||||||  | |||||| |||||||| |   |||||||||| || ||||    
T  3999746 ggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagaatgaaaaagtctttcataaaaacatgagatttcttaggat 3999647  T
Q  291 tgttttt 297  Q
    |||||||    
T  3999646 tgttttt 3999640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 102 - 165
Target Start/End: Original strand, 18749575 - 18749638
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaa 165  Q
    |||||||||||||||||||||||||| |||| |||||||||||| |||||||||||||| ||||    
T  18749575 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaaaacttttcatcactttaaaa 18749638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 102 - 269
Target Start/End: Original strand, 40246849 - 40247027
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||| |||||||||||| ||||||||||||  |||||||||||||||| || |||| || ||||| ||||  ||||||||||||||||| ||||||  ||    
T  40246849 aagattctttgtcatttaaaaaaagttttgtggtattcaatcaagactattaatcagttaaaaaaagtctagtggtattcaaaatcattcaaatttggaa 40246948  T
Q  201 aaattatttaataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatga 269  Q
      ||| ||||||||||          |||||||||| ||||||||| ||||||||||  || |||||| ||||||||||    
T  40246949 ggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttggcatgaaaaagtctttcatga 40247027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 102 - 234
Target Start/End: Complemental strand, 1440154 - 1440020
Alignment:
Q  102 aagactctttgtcattttaaaaaa-gttttgatgtattcaatcaagacttttcatcactta-aaaatgtctcatggtattcaaaatcatttaaatttcta 199  Q
    |||| |||||||||||| |||||| ||||||  |||||||||||||||| || |||||||| |||| ||||  ||||||||||||||||| ||||||| |    
T  1440154 aagattctttgtcatttaaaaaaaagttttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcca 1440055  T
Q  200 aaaattatttaataaattggattttgtaggatttt 234  Q
    |  ||| ||||||||||  |||||||  |||||||    
T  1440054 aggattgtttaataaatcagattttgatggatttt 1440020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 102 - 265
Target Start/End: Complemental strand, 51699680 - 51699507
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaatgtctcatggtattcaaaatcatttaaatttctaaa 201  Q
    |||| |||||||||||| |||||| | |||  |||||||||||||||| || ||||||||||||  |||  ||||||||||||||||| ||||||| ||     
T  51699680 aagattctttgtcatttaaaaaaaatcttgtggtattcaatcaagactcttaatcacttaaaaaaatctagtggtattcaaaatcattcaaatttcgaag 51699581  T
Q  202 aattatttaataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttc 265  Q
     |||  |||||||||          || ||||||| ||||||||| ||||||||||| || |||||||||||||    
T  51699580 gattggttaataaataagattttgatgaattttgtgggattttctagtgaaattttagcatgaaaaaatctttc 51699507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 110 - 282
Target Start/End: Original strand, 54625605 - 54625788
Alignment:
Q  110 ttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaatttctaaaaattatt 208  Q
    ||||||||| |||||| | ||| ||||||||||||||||| || ||||||| ||||| ||||  ||||||||||||| ||| ||||||| ||  ||| ||    
T  54625605 ttgtcatttaaaaaaaatcttgttgtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaattattcaaatttcgaaggattgtt 54625704  T
Q  209 taataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagattt 282  Q
    ||||||||          |||||||||| ||||||||| ||||||||||| || |||||| | ||||||||   ||||||||||    
T  54625705 taataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtttttcatgaaaacatgagattt 54625788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 102 - 297
Target Start/End: Original strand, 25418371 - 25418577
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactta-aaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||| |||||||||||| |||||||| |||  ||||||||||||||||||| |||||||| ||||  |||   |||||||||||||||| ||||||  ||    
T  25418371 aagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacttttaatcacttacaaaaaatctagcggtattcaaaatcattcaaatttgaaa 25418470  T
Q  201 aaattatttaataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggat 290  Q
      ||| ||||||||||          |||||||||| ||||||||| ||||||||||  || |||||| | ||||||||   |||||||||  || ||||    
T  25418471 ggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttggcatgaaaaagtatttcatgaaaacatgagattccttaggat 25418570  T
Q  291 tgttttt 297  Q
    |||||||    
T  25418571 tgttttt 25418577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 110 - 297
Target Start/End: Original strand, 35337748 - 35337944
Alignment:
Q  110 ttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaatttctaaaaattatt 208  Q
    |||||||||||||||||| |||  |||||||||||||||| || ||||||| ||||| ||||  ||||||||||||  ||| ||||||| ||  ||| ||    
T  35337748 ttgtcattttaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaaaaattcaaatttcgaaggattgtt 35337847  T
Q  209 taataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggattgttttt 297  Q
    ||||||||          |||||||||| ||||||||| ||||||||||| || |||||| | ||||||||   |||||||||| || |||||||||||    
T  35337848 taataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagt-tttcatgaaaacatgagattt-ttaggattgttttt 35337944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 102 - 297
Target Start/End: Complemental strand, 37820678 - 37820472
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactta-aaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||| |||||||||||| |||||| | |||  |||||||||||||| | || |||||||| |||| ||||  ||||||||||||||||| ||||||| ||    
T  37820678 aagattctttgtcatttaaaaaaattcttgtggtattcaatcaagattcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaa 37820579  T
Q  201 aaattatttaataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggat 290  Q
      ||| ||||||||||          |||||||||| ||||||||  ||||||||||| || |||||| |||||||| |   |||||||||| ||  |||    
T  37820578 ggattgtttaataaatcagattttgatggattttgtgggattttccagtgaaattttagcatgaaaaagtctttcataaaaacatgagatttcttaagat 37820479  T
Q  291 tgttttt 297  Q
    |||||||    
T  37820478 tgttttt 37820472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 102 - 197
Target Start/End: Original strand, 52114533 - 52114630
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt--aaaaatgtctcatggtattcaaaatcatttaaatttc 197  Q
    |||| |||||||||||| |||||||| |||  ||||||||||||||||||| |||||||  ||||| ||||  ||||||||||||| ||| |||||||    
T  52114533 aagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacttttaatcacttaaaaaaaagtctagtggtattcaaaataattcaaatttc 52114630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 102 - 234
Target Start/End: Complemental strand, 33996742 - 33996609
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaatgtctca-tggtattcaaaatcatttaaatttctaa 200  Q
    |||| |||||||||||| |||||||| |||  |||||||||||||||| || ||||||||||||     || ||||||||||||||||| ||||||| ||    
T  33996742 aagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatccagtggtattcaaaatcattcaaatttcgaa 33996643  T
Q  201 aaattatttaataaattggattttgtaggatttt 234  Q
      ||| ||||||||||  |||||||  |||||||    
T  33996642 ggattgtttaataaatcagattttgatggatttt 33996609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 217 - 297
Target Start/End: Complemental strand, 6131308 - 6131228
Alignment:
Q  217 tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggattgttttt 297  Q
    |||||||||| ||||||||| ||||||||||| || |||||| ||||||||||   |||||||||| || |||||||||||    
T  6131308 tggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgttttt 6131228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 102 - 225
Target Start/End: Original strand, 5825065 - 5825191
Alignment:
Q  102 aagactctttgtcattttaaaaaag--ttttgatgtattcaatcaagacttttcatcacttaaaaat-gtctcatggtattcaaaatcatttaaatttct 198  Q
    ||||||||||||||||| ||||||   || ||  |||||||||||| ||||||  ||| |||||||  || |||||||||||||||||||| ||||||      
T  5825065 aagactctttgtcatttaaaaaaacaattatgtggtattcaatcaaaactttttctcatttaaaaaaagtttcatggtattcaaaatcattcaaattttg 5825164  T
Q  199 aaaaattatttaataaattggattttg 225  Q
    ||  ||| |||||||||||||||||||    
T  5825165 aaggattgtttaataaattggattttg 5825191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 110 - 297
Target Start/End: Complemental strand, 29449051 - 29448853
Alignment:
Q  110 ttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaat-gtctcatggtattcaaaatcatttaaatttctaaaaattatt 208  Q
    |||||||||  ||||||| |||   ||||||||||||||| |  ||||||||||||  ||||  ||||||||||||||||| ||||||| ||  ||| ||    
T  29449051 ttgtcatttacaaaaagtcttgtgatattcaatcaagactctcaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtt 29448952  T
Q  209 taataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggattgttttt 297  Q
    ||||||||          |||||||||| ||||||||| || |||||||| ||  ||||| ||||||||||   |||||||||| || |||||||||||    
T  29448951 taataaatcagattttgatggattttgtgggattttctagtaaaattttagcataaaaaagtctttcatgaaaacatgagatttcttaggattgttttt 29448853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 101
Target Start/End: Complemental strand, 30862177 - 30862090
Alignment:
Q  14 cacatcatccttcaacaattctcaacacaccattgcaaggtccccatgtgttgaaagccacattcaacacctccattgcacttggtct 101  Q
    ||||||||||||||||||  |||||||||||||||||      |||  ||||||||| | ||||||||||||||||||||| ||||||    
T  30862177 cacatcatccttcaacaaaactcaacacaccattgcactactaccacatgttgaaagtctcattcaacacctccattgcacatggtct 30862090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 102 - 297
Target Start/End: Complemental strand, 44762238 - 44762032
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactta-aaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||| |||||||||||| ||||||||  ||  |||||||||||||||| || |||||||| |||| ||||  ||||||| ||||| ||| || |||| ||    
T  44762238 aagattctttgtcatttaaaaaaagtcatgtagtattcaatcaagactcttaatcacttaaaaaaagtctagtggtatttaaaattattcaagtttcgaa 44762139  T
Q  201 aaattatttaataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggat 290  Q
      ||| ||||||||||          |||||||||| ||||||| | ||||||||||| || |||||| ||||| ||||   |||||||||| ||  |||    
T  44762138 ggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaagat 44762039  T
Q  291 tgttttt 297  Q
    |||||||    
T  44762038 tgttttt 44762032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 173 - 258
Target Start/End: Original strand, 52080004 - 52080089
Alignment:
Q  173 tggtattcaaaatcatttaaatttctaaaaattatttaataaattggattttgtaggattttcttgtgaaattttaacaagaaaaa 258  Q
    ||||||||||||||||| ||||||  ||  ||| ||||||||||  |||||||| |||||||||  |||||||||| || ||||||    
T  52080004 tggtattcaaaatcattcaaattttgaaggattgtttaataaatcagattttgtgggattttctaatgaaattttagcatgaaaaa 52080089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 247
Target Start/End: Complemental strand, 23535977 - 23535866
Alignment:
Q  136 attcaatcaagacttttcatcacttaaaaat-gtctcatggtattcaaaatcatttaaatttctaaaaattatttaataaattggattttgtaggatttt 234  Q
    |||||||||| ||| |||||||||||||||  ||||  ||||||||||||||||| ||||||  ||  ||  |||||| |||| ||||| || |||||||    
T  23535977 attcaatcaa-actcttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttagaaggatcgtttaattaattagatttagtgggatttt 23535879  T
Q  235 cttgtgaaatttt 247  Q
    || ||||||||||    
T  23535878 ctagtgaaatttt 23535866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 138
Target Start/End: Complemental strand, 27240444 - 27240408
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtatt 138  Q
    ||||||||||||||||||||||||||||||| |||||    
T  27240444 aagactctttgtcattttaaaaaagttttgaggtatt 27240408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 149
Target Start/End: Complemental strand, 6131372 - 6131325
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagact 149  Q
    ||||||| ||||||||| ||||||||||||  ||||||||||||||||    
T  6131372 aagactcattgtcatttaaaaaaagttttgtggtattcaatcaagact 6131325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 297
Target Start/End: Original strand, 45862983 - 45863052
Alignment:
Q  228 ggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggattgttttt 297  Q
    ||||||| | ||| ||||||||||||||||| ||||||||||    ||||||||| ||| ||||||||||    
T  45862983 ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 45863052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 269
Target Start/End: Original strand, 12103733 - 12103773
Alignment:
Q  229 gattttcttgtgaaattttaacaagaaaaaatctttcatga 269  Q
    |||||||| |||||||||||||||||| || ||||||||||    
T  12103733 gattttctagtgaaattttaacaagaataagtctttcatga 12103773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 257
Target Start/End: Original strand, 22057893 - 22057933
Alignment:
Q  217 tggattttgtaggattttcttgtgaaattttaacaagaaaa 257  Q
    |||||||||| ||||||||| |||||||||||||| |||||    
T  22057893 tggattttgtgggattttctagtgaaattttaacatgaaaa 22057933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 298
Target Start/End: Original strand, 32580328 - 32580388
Alignment:
Q  238 gtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggattgttttta 298  Q
    ||| ||||||||||||||||| ||||||||||    ||||||||| ||| |||||||||||    
T  32580328 gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttta 32580388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 107; Significance: 1e-53; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 101 - 258
Target Start/End: Complemental strand, 5495298 - 5495140
Alignment:
Q  101 taagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaat-gtctcatggtattcaaaatcatttaaatttcta 199  Q
    ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||| |    
T  5495298 taagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtggtattcaaaatcatttaaatttcaa 5495199  T
Q  200 aaaattatttaataaattggattttgtaggattttcttgtgaaattttaacaagaaaaa 258  Q
    |  |||||||||||||||||||||||| ||||||| | ||| |||||||||||||||||    
T  5495198 aggattatttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaa 5495140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 102 - 297
Target Start/End: Complemental strand, 38536290 - 38536094
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaa-aaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||| ||| ||||  ||||||||||||| ||| ||||||| ||    
T  38536290 aagactctttgtcattttaaaaaagttttgaggtattcaatcaagacttttcattacttaacaaaagtcttgtggtattcaaaattattcaaatttcaaa 38536191  T
Q  201 aaattatttaataaattggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggattgttttt 297  Q
      ||| |||||||||||||||||||  ||||||| | ||| ||||||||||||||||| ||||||||||    ||||||||| ||| ||||||||||    
T  38536190 ggattgtttaataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 38536094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 102 - 297
Target Start/End: Complemental strand, 38558508 - 38558312
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaa-aaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||| ||| ||||  ||||||||||||| ||| ||||||| ||    
T  38558508 aagactctttgtcattttaaaaaagttttgaggtattcaatcaagacttttcattacttaacaaaagtcttgtggtattcaaaattattcaaatttcaaa 38558409  T
Q  201 aaattatttaataaattggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggattgttttt 297  Q
      ||| |||||||||||||||||||  ||||||| | ||| ||||||||||||||||| ||||||||||    ||||||||| ||| ||||||||||    
T  38558408 ggattgtttaataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 38558312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 102 - 297
Target Start/End: Complemental strand, 48668973 - 48668780
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaat-gtctcatggtattcaaaatcatttaaatttctaa 200  Q
    ||||||||||||||||||||||||||||||| |||||||||||    |||||||||||||||||  ||| | ||||||||||||| ||| ||||||| ||    
T  48668973 aagactctttgtcattttaaaaaagttttgaggtattcaatcat---ttttcatcacttaaaaaaagtcacgtggtattcaaaattattcaaatttcgaa 48668877  T
Q  201 aaattatttaataaattggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggattgttttt 297  Q
    | ||| |||||||||||||||||||| ||||| | | ||| ||||||||||||||||| ||||||||||    ||||||||| ||||||||||||||    
T  48668876 agattgtttaataaattggattttgtgggattctgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttgttgggattgttttt 48668780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 102 - 224
Target Start/End: Original strand, 49230885 - 49231008
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||| ||||  ||||||||||||||||| ||||||| ||    
T  49230885 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaa 49230984  T
Q  201 aaattatttaataaattggatttt 224  Q
      ||||||||||||||||||||||    
T  49230985 ggattatttaataaattggatttt 49231008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 101 - 298
Target Start/End: Original strand, 6312572 - 6312780
Alignment:
Q  101 taagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaatttcta 199  Q
    ||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| || ||||| ||||  ||||||||||||||||| ||||||| |    
T  6312572 taagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcga 6312671  T
Q  200 aaaattatttaataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattggga 289  Q
    |  ||| ||||||||||          |||||||||| ||||||| | ||| ||||||||||||||||| ||||||||||    ||||||||| ||| ||    
T  6312672 aggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgaga 6312771  T
Q  290 ttgttttta 298  Q
    |||||||||    
T  6312772 ttgttttta 6312780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 105 - 297
Target Start/End: Original strand, 45272589 - 45272780
Alignment:
Q  105 actctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaatg-tctcatggtattcaaaatcatttaaatttctaaaaa 203  Q
    |||||||||||||||||||| || |||| ||||||||||||||||||||||||||||||||   |||| ||||||||||||| ||||||||||| ||  |    
T  45272589 actctttgtcattttaaaaa-gtcttgaggtattcaatcaagacttttcatcacttaaaaaaaatctcgtggtattcaaaattatttaaatttcgaagga 45272687  T
Q  204 ttatttaataaattggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggattgttttt 297  Q
    |  ||||||||||||||||||||  |||||| | ||| ||||||||||||||||||||||| || |    ||||||||| ||| ||||||||||    
T  45272688 tg-tttaataaattggattttgtgagattttgtagtgtaattttaacaagaaaaaatcttttataaaaagatgagattttttgagattgttttt 45272780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 102 - 234
Target Start/End: Original strand, 46328041 - 46328174
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactta-aaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| |||| ||||| ||||||||||||||||| ||||||| ||    
T  46328041 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttacaaaaagtctcgtggtattcaaaatcattcaaatttcgaa 46328140  T
Q  201 aaattatttaataaattggattttgtaggatttt 234  Q
      ||| |||||| ||||||||||||  |||||||    
T  46328141 ggattgtttaattaattggattttgatggatttt 46328174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 102 - 298
Target Start/End: Original strand, 51701579 - 51701786
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||||||||||| || ||||| ||||  ||||||||||||||||| ||||||| ||    
T  51701579 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaa 51701678  T
Q  201 aaattatttaataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggat 290  Q
      ||| ||||||||||          |||||||||| ||||||| | ||| ||||||||||||||||| ||||||||||    ||||||||| ||| |||    
T  51701679 ggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagattttttgagat 51701778  T
Q  291 tgttttta 298  Q
    ||||||||    
T  51701779 tgttttta 51701786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 102 - 228
Target Start/End: Original strand, 18798490 - 18798617
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||||||||||| || ||||| ||||  ||||||||||||||||| ||||||| ||    
T  18798490 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaa 18798589  T
Q  201 aaattatttaataaattggattttgtag 228  Q
      ||| ||||||||||||||||||||||    
T  18798590 ggattgtttaataaattggattttgtag 18798617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 111 - 297
Target Start/End: Original strand, 29219294 - 29219481
Alignment:
Q  111 tgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaatttctaaaaattattt 209  Q
    ||||||||||||||||| ||||  |||||||||||||||||||||||||| ||||| ||||  ||||||||||||||||| |||||   ||  ||| |||    
T  29219294 tgtcattttaaaaaagtcttgagatattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaattaagaaggattgttt 29219393  T
Q  210 aataaattggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggattgttttt 297  Q
    ||||||||||||||||  ||||||| | ||| ||||||||||||||||| | ||||||||    ||||||||| ||| ||||||||||    
T  29219394 aataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttcttgagattgttttt 29219481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 102 - 297
Target Start/End: Complemental strand, 29396589 - 29396383
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||||||||||| || ||||| ||||  ||||||||||||||||| ||||||| ||    
T  29396589 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaa 29396490  T
Q  201 aaattatttaataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggat 290  Q
      ||| ||||||||||          |||||||||| ||||||| | ||| ||||||||||||||||| ||||||||||    ||||||||| ||| |||    
T  29396489 ggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagat 29396390  T
Q  291 tgttttt 297  Q
    |||||||    
T  29396389 tgttttt 29396383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 102 - 234
Target Start/End: Original strand, 25612156 - 25612289
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||||||||||||||||||||||||| |||| |||||||||||||| ||||||||| || ||||| ||||  ||||||||||||||||| ||||||| ||    
T  25612156 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcaaa 25612255  T
Q  201 aaattatttaataaattggattttgtaggatttt 234  Q
      ||| |||||||||||||||||||  |||||||    
T  25612256 ggattgtttaataaattggattttgatggatttt 25612289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 105 - 297
Target Start/End: Complemental strand, 48177660 - 48177457
Alignment:
Q  105 actctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactta-aaaatgtctcatggtattcaaaatcatttaaatttctaaaaa 203  Q
    ||||||||||||||||||||||| |||| |||||||||||| | ||||||||||||| |||| ||||  ||||||||||||||||| ||||||| ||  |    
T  48177660 actctttgtcattttaaaaaagtcttgaggtattcaatcaaaatttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaatga 48177561  T
Q  204 ttatttaataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggattgt 293  Q
    || ||||||||||          |||||||||| ||||||| | ||| ||||||||||||||||| ||||||||||    ||||||||| ||| ||||||    
T  48177560 ttgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgt 48177461  T
Q  294 tttt 297  Q
    ||||    
T  48177460 tttt 48177457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 102 - 297
Target Start/End: Complemental strand, 15835254 - 15835048
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaatg-tctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||| |||||| |||||||   |||  ||||||||||||||||| ||||| | ||    
T  15835254 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttctcatcatttaaaaaaaatcttgtggtattcaaaatcattcaaattgcaaa 15835155  T
Q  201 aaattatttaataaattggattttg----------taggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggat 290  Q
      ||| |||||||||||||||||||          | ||||||| | ||| ||||||||||||||||| ||||||||||    ||||||||| ||| |||    
T  15835154 ggattgtttaataaattggattttgatggattttatgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagat 15835055  T
Q  291 tgttttt 297  Q
    |||||||    
T  15835054 tgttttt 15835048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 102 - 234
Target Start/End: Complemental strand, 28387594 - 28387461
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaatg-tctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||| ||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||||   |||  ||||||||||| ||||| ||||||| ||    
T  28387594 aagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaaatcttgtggtattcaaattcattcaaatttcgaa 28387495  T
Q  201 aaattatttaataaattggattttgtaggatttt 234  Q
      ||| |||||||||||||||||||  |||||||    
T  28387494 ggattgtttaataaattggattttgatggatttt 28387461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 102 - 295
Target Start/End: Original strand, 35279671 - 35279875
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||| |||||||||||| |||||||| |||  |||||||||||||||| || ||||||| ||||| ||||  ||||||||||||||||||||||||| ||    
T  35279671 aagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactattaatcacttaaaaaaagtctagtggtattcaaaatcatttaaatttcgaa 35279770  T
Q  201 aaattatttaataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggat 290  Q
      ||| ||||||||||          |||||||||| ||||||||| ||||||||| |||| |||||| ||||||||||   |||||||||| || | ||    
T  35279771 ggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttcaacatgaaaaagtctttcatgaaaacatgagatttcttagaat 35279870  T
Q  291 tgttt 295  Q
    |||||    
T  35279871 tgttt 35279875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 102 - 298
Target Start/End: Complemental strand, 9322701 - 9322494
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaat-gtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||||||||||||||||||||||||| |||| |||||| ||||||||||||||||| |||||||  |||   ||||||||||||||||| ||||||  ||    
T  9322701 aagactctttgtcattttaaaaaagtcttgaggtattcgatcaagacttttcatcatttaaaaaaagtcctgtggtattcaaaatcattcaaatttagaa 9322602  T
Q  201 aaattatttaataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggat 290  Q
      ||| ||||||||||          |||||||| | ||||||| | ||| ||||||||||||||||| ||||||||||    ||||||||| ||| |||    
T  9322601 ggattgtttaataaattgaattttgatggattttatgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagat 9322502  T
Q  291 tgttttta 298  Q
    ||||||||    
T  9322501 tgttttta 9322494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 120 - 262
Target Start/End: Original strand, 47784404 - 47784546
Alignment:
Q  120 aaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaatgtctcatggtattcaaaatcatttaaatttctaaaaattatttaataaattgg 219  Q
    |||||||| |||  |||||||||||||||| ||  ||| ||||||| ||||  ||||||||||||| ||| ||| ||||||| ||| |||||||||||||    
T  47784404 aaaaaagtcttgtggtattcaatcaagactctttgtcatttaaaaaagtcttgtggtattcaaaattattcaaacttctaaagattgtttaataaattgg 47784503  T
Q  220 attttgtaggattttcttgtgaaattttaacaagaaaaaatct 262  Q
    |||||||  |||||||| || |||||||| || ||||||||||    
T  47784504 attttgtgagattttctagttaaattttagcatgaaaaaatct 47784546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 110 - 297
Target Start/End: Complemental strand, 50192744 - 50192545
Alignment:
Q  110 ttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactta--aaaatgtctcatggtattcaaaatcatttaaatttctaaaaattat 207  Q
    |||||||||||||||||| |||  |||||||||||||||| || ||||||||  |||| ||||  ||||||||||||||||| ||||||  ||  ||| |    
T  50192744 ttgtcattttaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtctagtggtattcaaaatcattcaaattttgaaggattgt 50192645  T
Q  208 ttaataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggattgttttt 297  Q
    |||||||||          |||||||||| ||||||||| ||||||||||| || |||||| ||||||||||   |||||||||| || |||||||||||    
T  50192644 ttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagattttttaggattgttttt 50192545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 102 - 297
Target Start/End: Complemental strand, 9577633 - 9577427
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactta-aaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    ||||| |||||||||||||||||||| ||||  |||| |||||| |||||| |||||||| |||| ||||  || |||||||||||||| ||||||  ||    
T  9577633 aagaccctttgtcattttaaaaaagtcttgagatattaaatcaaaactttttatcacttaaaaaaagtcttgtgatattcaaaatcattcaaatttagaa 9577534  T
Q  201 aaattatttaataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggat 290  Q
      ||| ||||||||||          ||||||||||  |||||||| |||||||||||  | |||||||||||||||||   |||||||||| |||||||    
T  9577533 ggattgtttaataaattggattttgatggattttgtgagattttctagtgaaattttagaatgaaaaaatctttcatgaaaacatgagatttcttgggat 9577434  T
Q  291 tgttttt 297  Q
    |||||||    
T  9577433 tgttttt 9577427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 102 - 294
Target Start/End: Original strand, 21222146 - 21222349
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||| |||||||||||| |||||||| |||  |||||||||||||||| || ||||||| ||||| ||||   |||||||||||||||| ||||||| ||    
T  21222146 aagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagaggtattcaaaatcattcaaatttcgaa 21222245  T
Q  201 aaattatttaataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggat 290  Q
      ||| ||||||||||          |||||||||| ||||||| | ||||||||||| || |||||| ||||||||||   |||||||||| || ||||    
T  21222246 ggattgtttaataaataagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggat 21222345  T
Q  291 tgtt 294  Q
    ||||    
T  21222346 tgtt 21222349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 102 - 165
Target Start/End: Complemental strand, 8141329 - 8141266
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaa 165  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||| |||||||||||||||    
T  8141329 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactattcatcacttaaaaa 8141266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 102 - 297
Target Start/End: Complemental strand, 19452009 - 19451803
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactta-aaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||| |||||||||||| |||||||| |||  ||||| |||||||||| || |||||||| |||| ||||  ||||||||||||||||| ||||||| ||    
T  19452009 aagattctttgtcatttaaaaaaagtcttgtggtatttaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaa 19451910  T
Q  201 aaattatttaataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggat 290  Q
      ||  ||||||||||          |||||||||| ||||||||| ||||||||||| || |||||| ||||||||||   |||||||||| ||  |||    
T  19451909 ggatcgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttatgat 19451810  T
Q  291 tgttttt 297  Q
    |||||||    
T  19451809 tgttttt 19451803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 102 - 297
Target Start/End: Complemental strand, 49198469 - 49198264
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaatgtctca-tggtattcaaaatcatttaaatttctaa 200  Q
    |||| |||||||||||| ||||||||||||  ||||||||| |||||| || ||||||||||||    ||| ||||||||||||||||| ||||||| ||    
T  49198469 aagattctttgtcatttaaaaaaagttttgtggtattcaat-aagactcttaatcacttaaaaaaagttcagtggtattcaaaatcattcaaatttcgaa 49198371  T
Q  201 aaattatttaataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggat 290  Q
      ||| ||||||||||          |||||||||| ||||||||| ||||||||||| || |||||| ||||||||||   ||||| |||| || ||||    
T  49198370 ggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaggat 49198271  T
Q  291 tgttttt 297  Q
    |||||||    
T  49198270 tgttttt 49198264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 107 - 269
Target Start/End: Original strand, 45535948 - 45536121
Alignment:
Q  107 tctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaat-gtctcatggtattcaaaatcatttaaatttctaaaaatt 205  Q
    |||||||||||| || ||||| |||  |||||||||||||||| || ||| ||||||||  ||||  ||||||||||||||||| ||||||| ||| |||    
T  45535948 tctttgtcatttaaacaaagtgttgtggtattcaatcaagactcttaatcgcttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaagatt 45536047  T
Q  206 atttaataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatga 269  Q
     ||||||||||          |||||||||| ||||||||| ||||||||||| || |||||| ||||||||||    
T  45536048 gtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatga 45536121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 109 - 297
Target Start/End: Complemental strand, 28824566 - 28824368
Alignment:
Q  109 tttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaa-tgtctcatggtattcaaaatcatttaaatttctaaaaattat 207  Q
    |||||||||| |||||||| |||  |||||||||||||||| || ||||||||||||  ||||  ||||||||||||||||| |||||||  || ||| |    
T  28824566 tttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaacagtcttgtggtattcaaaatcattcaaatttc-gaagattgt 28824468  T
Q  208 ttaataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggattgttttt 297  Q
    |||||||||          |||||||||| ||||||||| | |||||||||||| |||||| ||||| || |   |||||||||| || |||||||||||    
T  28824467 ttaataaatcagattttgatggattttgtgggattttctagggaaattttaacatgaaaaagtcttttataaaaacatgagatttcttaggattgttttt 28824368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 102 - 234
Target Start/End: Original strand, 730147 - 730281
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt--aaaaatgtctcatggtattcaaaatcatttaaatttcta 199  Q
    |||| |||||||||||| |||||||| |||  |||||||||||||||| || |||||||  ||||| ||||  ||||||||||||||||| ||||||| |    
T  730147 aagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtctagtggtattcaaaatcattcaaatttcga 730246  T
Q  200 aaaattatttaataaattggattttgtaggatttt 234  Q
      |||| ||||||||||  |||||||  |||||||    
T  730247 cgaattgtttaataaatcagattttgatggatttt 730281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 101 - 234
Target Start/End: Complemental strand, 37014842 - 37014708
Alignment:
Q  101 taagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaat-gtctcatggtattcaaaatcatttaaatttcta 199  Q
    ||||||||||||||||||  || |||| |||  |||||||||||| | | |||||||||||||||  ||||  || |||||||||||||| |||||||||    
T  37014842 taagactctttgtcatttagaagaagtcttgtggtattcaatcaatattcttcatcacttaaaaaaagtcttgtgatattcaaaatcattcaaatttcta 37014743  T
Q  200 aaaattatttaataaattggattttgtaggatttt 234  Q
    || ||| ||| |||||||| ||||||  |||||||    
T  37014742 aagattgttttataaattgaattttgatggatttt 37014708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 102 - 295
Target Start/End: Complemental strand, 35679329 - 35679125
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaat-gtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||| |||||||||||| |||||| | |||  |||||||||||||||| || ||||||||||||  |||   ||||||||||||||||| ||||||| ||    
T  35679329 aagattctttgtcatttaaaaaaaatcttgtagtattcaatcaagactcttaatcacttaaaaaaagtcatgtggtattcaaaatcattcaaatttcgaa 35679230  T
Q  201 aaattatttaataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggat 290  Q
      ||| ||||||||||          |||||||  | ||||||||| ||||||||||| || |||||| |||||||||| | |||||||||| ||  |||    
T  35679229 ggattgtttaataaatcagattttgatggatttgatgggattttctagtgaaattttagcatgaaaaagtctttcatgaagacatgagatttcttaagat 35679130  T
Q  291 tgttt 295  Q
    |||||    
T  35679129 tgttt 35679125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 135 - 226
Target Start/End: Complemental strand, 31622626 - 31622535
Alignment:
Q  135 tattcaatcaagacttttcatcacttaaaaatgtctcatggtattcaaaatcatttaaatttctaaaaattatttaataaattggattttgt 226  Q
    |||| |||||||||| ||||||||||||||| || |  | ||||||||||||||| ||||||| ||| ||| |||||||||| |||||||||    
T  31622626 tattaaatcaagactcttcatcacttaaaaaagtattgttgtattcaaaatcattcaaatttcaaaagattgtttaataaatcggattttgt 31622535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 110 - 269
Target Start/End: Original strand, 49418091 - 49418261
Alignment:
Q  110 ttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaat-gtctcatggtattcaaaatcatttaaatttctaaaaattatt 208  Q
    ||||||||| |||||| || ||  ||||||||| |||||| || ||||||||||||  ||||  ||||||||||||||||| ||||||| ||  ||| ||    
T  49418091 ttgtcatttaaaaaaaattatgtggtattcaattaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcaaaggattgtt 49418190  T
Q  209 taataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatga 269  Q
    ||||||||          |||||||||| |||||||||  |||||||||| || |||||||||||||||||    
T  49418191 taataaatcagattttgatggattttgtgggattttctattgaaattttagcatgaaaaaatctttcatga 49418261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 102 - 269
Target Start/End: Complemental strand, 6304454 - 6304275
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaaga-cttttcatcacttaaaaat-gtctcatggtattcaaaatcatttaaatttcta 199  Q
    |||| |||||||||||| |||||||| |||  |||||||| ||| | || || ||||||||||||  ||||  ||||||||||||||||| ||||||| |    
T  6304454 aagattctttgtcatttaaaaaaagtcttgtggtattcaaccaaaaactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcga 6304355  T
Q  200 aaaattatttaataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatga 269  Q
    |  ||| ||||||||||          |||||||||| ||||||||| ||||||||||| || |||||| ||||||||||    
T  6304354 aggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatga 6304275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 102 - 297
Target Start/End: Complemental strand, 45760211 - 45760004
Alignment:
Q  102 aagactctttgtcattttaaaaaa-gttttgatgtattcaatcaagacttttcatcactta-aaaatgtctcatggtattcaaaatcatttaaatttcta 199  Q
    |||| ||||||||| ||||||||| ||  ||  |||||||||||||||| || |||||||| |||| ||||  ||||||||||||||||| ||| ||| |    
T  45760211 aagattctttgtcaatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaacttcga 45760112  T
Q  200 aaaattatttaataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattggga 289  Q
    |  ||| ||||||||||          |||||||||| ||||||||| ||||||||||| || |||||| | ||| ||||   |||||||||| || |||    
T  45760111 aggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtatttgatgaaaacatgagatttcttagga 45760012  T
Q  290 ttgttttt 297  Q
    ||||||||    
T  45760011 ttgttttt 45760004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 136 - 234
Target Start/End: Complemental strand, 32589120 - 32589021
Alignment:
Q  136 attcaatcaagacttttcatcacttaaaa-atgtctcatggtattcaaaatcatttaaatttctaaaaattatttaataaattggattttgtaggatttt 234  Q
    |||||||||||||| |||||||||||||| | ||||  ||||||||||||||||| ||||||  ||  ||| |||||||||| ||||||||  |||||||    
T  32589120 attcaatcaagactcttcatcacttaaaagaagtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaatcggattttgatggatttt 32589021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 101 - 234
Target Start/End: Original strand, 29556102 - 29556236
Alignment:
Q  101 taagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaatg-tctcatggtattcaaaatcatttaaatttcta 199  Q
    ||||| || |||| |||| |||||||| |||   ||||||||||||||| || ||||||||||||   |||  || |||||||||||||| ||||||| |    
T  29556102 taagattcattgttatttaaaaaaagtcttgtgttattcaatcaagactcttaatcacttaaaaaaaatctagtgttattcaaaatcattcaaatttcga 29556201  T
Q  200 aaaattatttaataaattggattttgtaggatttt 234  Q
    || ||| ||||||||||| |||||||  |||||||    
T  29556202 aagattgtttaataaattagattttgatggatttt 29556236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 102 - 282
Target Start/End: Original strand, 33025511 - 33025693
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaaga-cttttcatcacttaaaaat-gtctcatggtattcaaaatcatttaaatttcta 199  Q
    |||| |||||| |||||| ||||| | |||  |||||||||||| | || || ||||||||||||  ||||  ||||||||||||||||| ||||||  |    
T  33025511 aagattctttgacatttttaaaaattcttgtggtattcaatcaaaaactcttaatcacttaaaaaaagtcttgtggtattcaaaatcattcaaattttga 33025610  T
Q  200 aaaattatttaataaattggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagattt 282  Q
    |  ||| ||||||| ||  |||||||| |||||||||  | |||||||| || |||||| ||||||||||   ||||||||||    
T  33025611 aggattgtttaatacatcagattttgtgggattttctaataaaattttagcatgaaaaagtctttcatgaaaacatgagattt 33025693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 111 - 297
Target Start/End: Original strand, 47780719 - 47780916
Alignment:
Q  111 tgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaat-gtctcatggtattcaaaatcatttaaatttctaaaaattattt 209  Q
    |||||||| ||||||||  ||  |||||||||||||||| || ||||||||||||  ||||  || |||||||||||||| ||| ||  ||  ||| |||    
T  47780719 tgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaaaatcattcaaaattaaaaggattgttt 47780818  T
Q  210 aataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggattgttttt 297  Q
    |||||||          |||||||||| ||||||||| |||||||||||||| |||||| | ||||||||   |||||||||| ||  ||||||||||    
T  47780819 aataaatcagattttgatggattttgtgggattttctagtgaaattttaacatgaaaaagtttttcatgaaaacatgagatttcttaagattgttttt 47780916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 297
Target Start/End: Complemental strand, 47654553 - 47654346
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactta--aaaatgtctcatggtattcaaaatcatttaaatttcta 199  Q
    |||| |||||||||||| ||| |||| |||  |||||||||||| ||| || ||||||||  |||| ||||  ||||||||||||| ||| ||||||| |    
T  47654553 aagattctttgtcatttaaaagaagtcttgtggtattcaatcaaaactcttaatcacttaaaaaaaagtctagtggtattcaaaattattcaaatttcga 47654454  T
Q  200 aaaattatttaataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattggga 289  Q
    |  ||| ||||||||||          |||||||||| | ||||||| | ||||||||| || |||||| | ||||||||   |||||||||| || |||    
T  47654453 aggattgtttaataaatcagattttgatggattttgtggaattttctagggaaattttagcatgaaaaagtatttcatgaaaacatgagatttcttagga 47654354  T
Q  290 ttgttttt 297  Q
    ||||||||    
T  47654353 ttgttttt 47654346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 102 - 189
Target Start/End: Original strand, 22183369 - 22183457
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatt 189  Q
    |||| |||||||||||| |||||||| |||  |||||||||||||| | || ||||||| ||||| ||||  |||||||||||||||||    
T  22183369 aagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagattcttaatcacttaaaaaaagtctagtggtattcaaaatcatt 22183457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 173 - 297
Target Start/End: Complemental strand, 31572326 - 31572192
Alignment:
Q  173 tggtattcaaaatcatttaaatttctaaaaattatttaataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatct 262  Q
    ||||||||||||||||||||||||| ||  ||| ||||||||||          |||||||||| ||||||| | |||||||||||  | |||||| |||    
T  31572326 tggtattcaaaatcatttaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttatagtgaaattttaggatgaaaaagtct 31572227  T
Q  263 ttcatgatgtcatgagatttattgggattgttttt 297  Q
    |||||||  ||||||||||| || | |||||||||    
T  31572226 ttcatgaaatcatgagatttcttagaattgttttt 31572192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 165
Target Start/End: Original strand, 953818 - 953881
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaa 165  Q
    |||| |||||||||||| |||||||| |||  |||||| ||||||||| || ||||||||||||    
T  953818 aagattctttgtcatttaaaaaaagtcttgtggtattcgatcaagactcttaatcacttaaaaa 953881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 263
Target Start/End: Original strand, 48524444 - 48524490
Alignment:
Q  217 tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctt 263  Q
    |||||||||| ||||||||| |||||||||||||| |||||| ||||    
T  48524444 tggattttgtgggattttctagtgaaattttaacatgaaaaagtctt 48524490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 248
Target Start/End: Original strand, 955823 - 955896
Alignment:
Q  175 gtattcaaaatcatttaaatttctaaaaattatttaataaattggattttgtaggattttcttgtgaaatttta 248  Q
    ||||||||||||||| ||||||| ||   || ||||||||||  |||||||  ||||||||| |||||||||||    
T  955823 gtattcaaaatcattcaaatttcgaagggttgtttaataaatcagattttgatggattttctagtgaaatttta 955896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 225
Target Start/End: Original strand, 51085837 - 51085918
Alignment:
Q  145 agacttttcatcacttaaaa-atgtctcatggtattcaaaatcatttaaatttctaaaaattatttaataaattggattttg 225  Q
    ||||| ||||||| |||||| | ||||| ||||||||||||| ||| ||||||  ||  |||||| ||||||||||||||||    
T  51085837 agactattcatcatttaaaagaagtctcgtggtattcaaaataattcaaattttgaaggattattaaataaattggattttg 51085918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 242 - 298
Target Start/End: Original strand, 25612307 - 25612363
Alignment:
Q  242 aattttaacaagaaaaaatctttcatgatgtcatgagatttattgggattgttttta 298  Q
    ||||||||||||||||| ||||||||||    ||||||||| ||| |||||||||||    
T  25612307 aattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttta 25612363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 152
Target Start/End: Complemental strand, 33243348 - 33243312
Alignment:
Q  116 ttttaaaaaagttttgatgtattcaatcaagactttt 152  Q
    ||||||||||||||| | |||||||||||||||||||    
T  33243348 ttttaaaaaagtttttaggtattcaatcaagactttt 33243312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 152
Target Start/End: Complemental strand, 33263521 - 33263485
Alignment:
Q  116 ttttaaaaaagttttgatgtattcaatcaagactttt 152  Q
    ||||||||||||||| | |||||||||||||||||||    
T  33263521 ttttaaaaaagtttttaggtattcaatcaagactttt 33263485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 106; Significance: 5e-53; HSPs: 62)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 101 - 297
Target Start/End: Original strand, 12913228 - 12913425
Alignment:
Q  101 taagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaat-gtctcatggtattcaaaatcatttaaatttcta 199  Q
    ||||||||||||||||||||||||||| |||| |||||||||||||  ||||||||| |||||||  ||||||||||||||||||||||| ||||||  |    
T  12913228 taagactctttgtcattttaaaaaagtcttgaggtattcaatcaagctttttcatcatttaaaaaaagtctcatggtattcaaaatcattcaaattttga 12913327  T
Q  200 aaaattatttaataaattggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggattgttttt 297  Q
    |  ||| |||||||||||||||||||| ||||||||| ||||||||||||||||||||| | |||||||| | |||||||||| |||| ||| |||||    
T  12913328 aggattgtttaataaattggattttgtgggattttctagtgaaattttaacaagaaaaagtatttcatgaagacatgagatttcttggaattattttt 12913425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 102 - 269
Target Start/End: Complemental strand, 30967500 - 30967332
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaat-gtctcatggtattcaaaatcatttaaatttctaa 200  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||  ||||  ||||||||||||||||| ||||||| ||    
T  30967500 aagactctttgtcattttaaaaaagttttgaggtattcaatcaagatttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcaaa 30967401  T
Q  201 aaattatttaataaattggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatga 269  Q
      ||| |||||||||||||||||||| ||||||| | ||| ||||||||||||||||||||||||||||    
T  30967400 ggattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaaatctttcatga 30967332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 105 - 297
Target Start/End: Original strand, 23987222 - 23987415
Alignment:
Q  105 actctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaatttctaaaaa 203  Q
    ||||||||||||||||||||||| |||| |||||||||||| |||||||||||||| ||||| ||||  ||||||||||||||||| ||||||| ||  |    
T  23987222 actctttgtcattttaaaaaagtcttgaggtattcaatcaaaacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaagga 23987321  T
Q  204 ttatttaataaattggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggattgttttt 297  Q
    || ||||||||||| |||||||  ||||||| | ||| ||||||||||||||||| ||||||||||    ||||||||| ||| ||||||||||    
T  23987322 ttgtttaataaattagattttgatggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 23987415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 102 - 267
Target Start/End: Complemental strand, 49501712 - 49501546
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaa-tgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    ||||||||||||||||||||| || | |||| |||||||||||||||||||||||||||||||| |||||  ||| ||||||||||||| ||||||| ||    
T  49501712 aagactctttgtcattttaaataaatcttgaggtattcaatcaagacttttcatcacttaaaaaatgtcttgtggcattcaaaatcattcaaatttcgaa 49501613  T
Q  201 aaattatttaataaattggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcat 267  Q
      ||| |||||||||||||||||||| | ||||| | ||| ||||||||||||||||| ||||||||    
T  49501612 tgattgtttaataaattggattttgtggaattttgtagtgtaattttaacaagaaaaagtctttcat 49501546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 102 - 267
Target Start/End: Complemental strand, 49507777 - 49507611
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaa-tgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    ||||||||||||||||||||| || | |||| |||||||||||||||||||||||||||||||| |||||  ||| ||||||||||||| ||||||| ||    
T  49507777 aagactctttgtcattttaaataaatcttgaggtattcaatcaagacttttcatcacttaaaaaatgtcttgtggcattcaaaatcattcaaatttcgaa 49507678  T
Q  201 aaattatttaataaattggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcat 267  Q
      ||| |||||||||||||||||||| | ||||| | ||| ||||||||||||||||| ||||||||    
T  49507677 tgattgtttaataaattggattttgtggaattttgtagtgtaattttaacaagaaaaagtctttcat 49507611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 121 - 269
Target Start/End: Original strand, 28483923 - 28484071
Alignment:
Q  121 aaaaagttttgatgtattcaatcaagacttttcatcacttaaaaat-gtctcatggtattcaaaatcatttaaatttctaaaaattatttaataaattgg 219  Q
    ||||||| |||| ||||||||||||||||||||||||||||||||  ||||| ||||||||||||||||| ||||||| ||  |||||||||||||||||    
T  28483923 aaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtggtattcaaaatcattcaaatttcgaaggattatttaataaattgg 28484022  T
Q  220 attttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatga 269  Q
    ||||||||||||||| | ||| || |||||||||||||| ||||||||||    
T  28484023 attttgtaggattttgtagtgtaa-tttaacaagaaaaagtctttcatga 28484071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 101 - 297
Target Start/End: Complemental strand, 32684189 - 32684003
Alignment:
Q  101 taagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    ||||| ||||||||||||||||||||| |||| |||||||||||||||||||||||| ||||||| ||||  ||||||||||||||||| ||||||| ||    
T  32684189 taagattctttgtcattttaaaaaagtattgaggtattcaatcaagacttttcatcatttaaaaaagtcttgtggtattcaaaatcattcaaatttcgaa 32684090  T
Q  201 aaattatttaataaattggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggattgttttt 297  Q
      ||| |||||||||||||||||||||          ||| ||||||||||||||||| ||||||||||    ||||||||||||| ||||||||||    
T  32684089 ggattgtttaataaattggattttgta----------gtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttattgagattgttttt 32684003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 105 - 297
Target Start/End: Complemental strand, 36479429 - 36479237
Alignment:
Q  105 actctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactta-aaaatgtctcatggtattcaaaatcatttaaatttctaaaaa 203  Q
    ||||||||||||||||||||||| |||| ||||||||| |||| ||||||||||||| |||| ||||| ||||||||||||| ||| ||||||| ||  |    
T  36479429 actctttgtcattttaaaaaagtcttgaggtattcaattaagatttttcatcacttaaaaaaagtctcgtggtattcaaaattattcaaatttcgaagga 36479330  T
Q  204 ttatttaataaattggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggattgttttt 297  Q
    ||||||||||||||||||||||  ||||||| | ||||||||||| ||| ||||| ||||| ||||   |||||||||| ||| |||| |||||    
T  36479329 ttatttaataaattggattttgatggatttt-tagtgaaattttagcaaaaaaaagtcttttatgaaaacatgagatttcttgagattattttt 36479237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 105 - 234
Target Start/End: Complemental strand, 29649865 - 29649735
Alignment:
Q  105 actctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactta-aaaatgtctcatggtattcaaaatcatttaaatttctaaaaa 203  Q
    ||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| |||| ||||  ||||||||||||||||| ||||||| ||| |    
T  29649865 actctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaaga 29649766  T
Q  204 ttatttaataaattggattttgtaggatttt 234  Q
    || |||||||||||||||||||  |||||||    
T  29649765 ttgtttaataaattggattttgatggatttt 29649735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 102 - 234
Target Start/End: Original strand, 51320926 - 51321059
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||| ||||  ||||||||||||||||| ||||||| ||    
T  51320926 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaa 51321025  T
Q  201 aaattatttaataaattggattttgtaggatttt 234  Q
      ||| |||||||||||||||||||  |||||||    
T  51321026 ggattgtttaataaattggattttgatggatttt 51321059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 102 - 298
Target Start/End: Original strand, 5441409 - 5441616
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||||||||||| || ||||| ||||  ||||||||||||||||| ||||||| ||    
T  5441409 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaa 5441508  T
Q  201 aaattatttaataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggat 290  Q
      ||| ||||||||||          |||||||||| ||||||| | ||| ||||||||||||||||| ||||||||||    ||||||||| ||| |||    
T  5441509 ggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagat 5441608  T
Q  291 tgttttta 298  Q
    ||||||||    
T  5441609 tgttttta 5441616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 102 - 298
Target Start/End: Original strand, 27768061 - 27768268
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||||||||||| || ||||| ||||  ||||||||||||||||| ||||||| ||    
T  27768061 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaa 27768160  T
Q  201 aaattatttaataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggat 290  Q
      ||| ||||||||||          |||||||||| ||||||| | ||| ||||||||||||||||| ||||||||||    ||||||||| ||| |||    
T  27768161 ggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagat 27768260  T
Q  291 tgttttta 298  Q
    ||||||||    
T  27768261 tgttttta 27768268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 102 - 298
Target Start/End: Original strand, 54341149 - 54341356
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||||||||||| || ||||| ||||  ||||||||||||||||| ||||||| ||    
T  54341149 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaa 54341248  T
Q  201 aaattatttaataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggat 290  Q
      ||| ||||||||||          |||||||||| ||||||| | ||| ||||||||||||||||| ||||||||||    ||||||||| ||| |||    
T  54341249 ggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagat 54341348  T
Q  291 tgttttta 298  Q
    ||||||||    
T  54341349 tgttttta 54341356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 102 - 297
Target Start/End: Complemental strand, 54853669 - 54853463
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactta-aaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||| |||| ||||  ||||||||||||| ||| ||||||| ||    
T  54853669 aagactctttttcattttaaaaaagtcttgaagtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaattattcaaatttcaaa 54853570  T
Q  201 aaattatttaataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggat 290  Q
      ||| ||||||||||          |||||||||| ||||||| | ||| ||||||||||||||||||||||||||||    ||||||||| ||| |||    
T  54853569 ggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaagatgagatttcttgagat 54853470  T
Q  291 tgttttt 297  Q
    |||||||    
T  54853469 tgttttt 54853463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 102 - 269
Target Start/End: Original strand, 5799982 - 5800151
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaat--gtctcatggtattcaaaatcatttaaatttcta 199  Q
    ||||||||||||||||||||||||  |||||||||||  ||||| |||||||||||||||||||   ||||  ||||||||||||||||| ||||||| |    
T  5799982 aagactctttgtcattttaaaaaaaatttgatgtatttcatcaaaacttttcatcacttaaaaaaaagtcttgtggtattcaaaatcattcaaatttcaa 5800081  T
Q  200 aaaattatttaataaattggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatga 269  Q
    |  ||| ||||||||||||||||||||  |||||| | | | ||||||||||||||||| ||||| ||||    
T  5800082 aggattgtttaataaattggattttgtgagattttgtagagtaattttaacaagaaaaagtctttaatga 5800151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 102 - 234
Target Start/End: Original strand, 32322096 - 32322229
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaat-gtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||||||||||||||||||||||||| |||| |||||||||||||| |||||||||||||||||| ||||  ||||||||||||||||| ||||||| ||    
T  32322096 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcacttaaaaatagtcttgtggtattcaaaatcattcaaatttcgaa 32322195  T
Q  201 aaattatttaataaattggattttgtaggatttt 234  Q
      ||| |||||||||||| ||||||  |||||||    
T  32322196 ggattgtttaataaattgaattttgatggatttt 32322229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 102 - 228
Target Start/End: Complemental strand, 49835014 - 49834887
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactta-aaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||||||||||||||||||| ||||  |||| |||||||||||||||||||||||||||| |||| ||||  ||||||||||||||||| ||||||| ||    
T  49835014 aagactctttgtcattttaacaaaggcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaa 49834915  T
Q  201 aaattatttaataaattggattttgtag 228  Q
      ||| ||||||||||||||||||||||    
T  49834914 ggattgtttaataaattggattttgtag 49834887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 102 - 234
Target Start/End: Original strand, 37915832 - 37915965
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||||||| | ||||||||||||||| |||| ||||||||||||||||||||||||||| ||||| ||||  ||||||||||||||||| ||||||| ||    
T  37915832 aagactctctatcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaa 37915931  T
Q  201 aaattatttaataaattggattttgtaggatttt 234  Q
      ||| |||||||||||||||||||  |||||||    
T  37915932 ggattgtttaataaattggattttgatggatttt 37915965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 102 - 282
Target Start/End: Complemental strand, 44771055 - 44770863
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgta-ttcaatcaagacttttcatcacttaaaaatg-tctcatggtattcaaaatcatttaaatttcta 199  Q
    |||||||||||||||||||||||| | |||| ||| ||||||||||| |||||||||||||||||   |||||||||||||||||||||| ||||||  |    
T  44771055 aagactctttgtcattttaaaaaaatcttgaggtaattcaatcaagatttttcatcacttaaaaaaaatctcatggtattcaaaatcattcaaattttga 44770956  T
Q  200 aaaattatttaataaattggat----------tttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagattt 282  Q
    |  ||| |||||||||||||||          ||||| ||||||||| |||||||||||| |||||||| |||||||||| | ||||||||||    
T  44770955 aggattgtttaataaattggattttggtggattttgtgggattttctagtgaaattttaagaagaaaaagtctttcatgacgacatgagattt 44770863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 102 - 294
Target Start/End: Original strand, 50018256 - 50018449
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||||||||||||||||||||||||| |||| |||||| ||||||||||||| ||| || ||||| ||||  |||||||||| |||||| ||||||  ||    
T  50018256 aagactctttgtcattttaaaaaagtcttgaggtattccatcaagacttttcttcatttaaaaaaagtcttgtggtattcaagatcattcaaattttgaa 50018355  T
Q  201 aaattatttaataaattggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggattgtt 294  Q
      ||| |||||||||||| |||||   ||||||| | ||| ||||||||||||||||| ||||||| ||    ||||||||||||| |||||||    
T  50018356 ggattgtttaataaattgaattttaatggattttgtagtgtaattttaacaagaaaaagtctttcaagaaaagatgagatttattgagattgtt 50018449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 170 - 297
Target Start/End: Complemental strand, 56445477 - 56445350
Alignment:
Q  170 tcatggtattcaaaatcatttaaatttctaaaaattatttaataaattggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatga 269  Q
    |||||||||||||||||||| ||||||| ||  ||| |||||||||||||||||||| ||||||||| |||||| |||| ||||||||| |||||||| |    
T  56445477 tcatggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgtgggattttctagtgaaactttagcaagaaaaagtctttcataa 56445378  T
Q  270 tgtcatgagatttattgggattgttttt 297  Q
     | |||||||||| ||| ||||||||||    
T  56445377 agacatgagatttcttgagattgttttt 56445350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 102 - 234
Target Start/End: Complemental strand, 37828603 - 37828470
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||||||||||||||||| ||||||| |||| |||||||||||||| ||||||||| || ||||| ||||  ||||||||||||||||| ||||||| ||    
T  37828603 aagactctttgtcatttttaaaaagtcttgaggtattcaatcaagatttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaa 37828504  T
Q  201 aaattatttaataaattggattttgtaggatttt 234  Q
      ||| |||||||||||||||||||  |||||||    
T  37828503 ggattgtttaataaattggattttgatggatttt 37828470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 102 - 297
Target Start/End: Complemental strand, 40537346 - 40537155
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaa-tgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    ||||||||||||||||| |||||||| |||  |||||||||||| ||| || |||||||||||| |||     |||||||||||||||||||||||| ||    
T  40537346 aagactctttgtcatttaaaaaaagtcttgtggtattcaatcaaaactcttaatcacttaaaaaatgt-----ggtattcaaaatcatttaaatttcgaa 40537252  T
Q  201 aaattatttaataaattggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggattgttttt 297  Q
      ||| ||||||||||  |||||||  ||||||| | ||||||||||| || |||||| ||||||||||   |||||||||| || ||||| |||||    
T  40537251 tgattgtttaataaatctgattttgatggattttgtggtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggatttttttt 40537155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 102 - 297
Target Start/End: Original strand, 12112950 - 12113156
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||| |||||||||||| |||||||| |||  |||||||||||| ||| || ||||||| ||||| |||| |||||||||||||||||| ||||||| ||    
T  12112950 aagattctttgtcatttaaaaaaagtcttgtggtattcaatcaaaactcttaatcacttaaaaaaagtctaatggtattcaaaatcattcaaatttcgaa 12113049  T
Q  201 aaattatttaataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggat 290  Q
      ||| ||||||||||          |||||||||| | ||||||| ||||||||||| || |||||| ||||||||||   |||||||||| |||||||    
T  12113050 ggattgtttaataaatcagattttaatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttgggat 12113149  T
Q  291 tgttttt 297  Q
    |||||||    
T  12113150 tgttttt 12113156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 102 - 297
Target Start/End: Complemental strand, 31314929 - 31314737
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaat-gtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||| |||||||||||| |||||||| |||  ||||||||    |||| || ||||||||||||  ||||  ||||||||||||||||| ||||||| ||    
T  31314929 aagattctttgtcatttaaaaaaagtcttgtggtattcaa----gactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaa 31314834  T
Q  201 aaattatttaataaattggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggattgttttt 297  Q
      ||| ||||||||||  |||||||| ||||||||| ||||||||||| || |||||| ||||||||||   |||||||||| || |||||||||||    
T  31314833 ggattgtttaataaatcagattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgttttt 31314737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 102 - 297
Target Start/End: Original strand, 1112898 - 1113104
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||| |||||||||||| |||||||| |||  |||||||||||||||| || ||||||| ||||| ||||  ||||||||||||||||| ||||||| ||    
T  1112898 aagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcaaa 1112997  T
Q  201 aaattatttaataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggat 290  Q
      ||| ||||||||||          |||||||||| |||||| || || ||||||||||| |||||| ||||||||||   |||||||||| || ||||    
T  1112998 tgattgtttaataaatcagattttgatggattttgtgggatttcctagtaaaattttaacatgaaaaagtctttcatgaaaacatgagatttcttaggat 1113097  T
Q  291 tgttttt 297  Q
    |||||||    
T  1113098 tgttttt 1113104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 102 - 269
Target Start/End: Original strand, 22202020 - 22202198
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||| |||||||||||| |||||||| |||  |||||||||||||||| || ||||||| ||||| ||||  ||||||||||||||||| ||||||| ||    
T  22202020 aagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattaaaatttcaaa 22202119  T
Q  201 aaattatttaataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatga 269  Q
    | ||| ||||||||||          |||||||||| ||||||||| ||||||||||| || |||||| ||||||||||    
T  22202120 agattgtttaataaataaaattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatga 22202198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 102 - 297
Target Start/End: Original strand, 25331136 - 25331342
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||| |||||||||||| |||||||| |||  |||||||||||||||| || ||||||| ||||| ||||  || |||||||||||||| ||||||| ||    
T  25331136 aagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaaaatcattcaaatttcaaa 25331235  T
Q  201 aaattatttaataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggat 290  Q
      ||| ||||||||||          |||||||||| ||||||||| ||||||||||| || |||||| ||||||||||   |||||||||| || ||||    
T  25331236 ggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggat 25331335  T
Q  291 tgttttt 297  Q
    |||||||    
T  25331336 tgttttt 25331342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 102 - 183
Target Start/End: Original strand, 20021349 - 20021430
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaatgtctcatggtattcaaa 183  Q
    |||| ||||||||||||||||||| | |||| |||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  20021349 aagattctttgtcattttaaaaaaatcttgaagtattcaatcaagacttttcatcacttaaaaaagtctcattgtattcaaa 20021430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 105 - 225
Target Start/End: Original strand, 28370932 - 28371053
Alignment:
Q  105 actctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaa-aatgtctcatggtattcaaaatcatttaaatttctaaaaa 203  Q
    |||||||||| |||||||||||| ||||  ||||||||||| |||||| |||||||||| || ||||||||||||||||||||||| ||||||  ||  |    
T  28370932 actctttgtcgttttaaaaaagtcttgagatattcaatcaaaactttttatcacttaaataaagtctcatggtattcaaaatcattcaaattttaaagga 28371031  T
Q  204 ttatttaataaattggattttg 225  Q
    || |||||||||||| ||||||    
T  28371032 ttgtttaataaattgaattttg 28371053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 102 - 297
Target Start/End: Complemental strand, 41881284 - 41881077
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaat--gtctcatggtattcaaaatcatttaaatttcta 199  Q
    |||| |||||||||||| |||||||| |||  |||||||||||||||| || ||||||||||||   || |  ||||||||||||||||| ||||||| |    
T  41881284 aagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtttagtggtattcaaaatcattcaaatttcga 41881185  T
Q  200 aaaattatttaataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattggga 289  Q
    |  ||| ||||||||||          |||||||||| ||||||||| ||||||||||| || |||||| ||||||||||   |||||||||| || |||    
T  41881184 aggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttagga 41881085  T
Q  290 ttgttttt 297  Q
    ||||||||    
T  41881084 ttgttttt 41881077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 110 - 297
Target Start/End: Complemental strand, 39479550 - 39479350
Alignment:
Q  110 ttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaat---gtctcatggtattcaaaatcatttaaatttctaaaaatta 206  Q
    ||||||||| |||||||| |||  |||||||||||||||| || ||||||||||||    | ||  ||||||||||||||||| ||||||| || ||||     
T  39479550 ttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaaagacttgtggtattcaaaatcattcaaatttcgaagaattg 39479451  T
Q  207 tttaataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggattgtttt 296  Q
    ||||||||||          |||||||||| ||||||||| ||||||||||| || |||||| ||||||||||   |||||||||| || ||||||||||    
T  39479450 tttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcaggaaaaagtctttcatgaaagcatgagatttcttaggattgtttt 39479351  T
Q  297 t 297  Q
    |    
T  39479350 t 39479350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 102 - 297
Target Start/End: Complemental strand, 46635843 - 46635643
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaat-gtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||| |||||||||||| |||||||| |||  |||||||||||||||| || ||||||||||||  || |  | ||||||||||||||| ||||||| ||    
T  46635843 aagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtttagtagtattcaaaatcattcaaatttcgaa 46635744  T
Q  201 aaattatttaataaat----tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggattgtttt 296  Q
      ||| ||||||||||    | |||||||| ||||||| | ||||||||||| || |||||| |||||||| |   |||||||||| || ||||||||||    
T  46635743 ggattgtttaataaataagattgattttgtgggattttttagtgaaattttagcatgaaaaagtctttcataaaaacatgagatttcttaggattgtttt 46635644  T
Q  297 t 297  Q
    |    
T  46635643 t 46635643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 105 - 269
Target Start/End: Original strand, 41725133 - 41725305
Alignment:
Q  105 actctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatca-cttaaaaatgtctcatggtattcaaaatcatttaaatttctaaaaa 203  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||||||||||| || ||||| ||||  || |||||||||||||| ||||||  ||  |    
T  41725133 actctttgtcattttaaaaaagtcttgatgtatgcaatcaagacttttcatcacctaaaaaaagtcttgtgatattcaaaatcattcaaattttgaagga 41725232  T
Q  204 ttatttaa--taaat-----tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatga 269  Q
    || |||||  |  ||     || ||||||| ||||||| | ||| ||||||||||||||||||||||||||||    
T  41725233 ttgtttaaattggattttgatgaattttgtgggattttatagtgtaattttaacaagaaaaaatctttcatga 41725305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 102 - 282
Target Start/End: Original strand, 55302848 - 55303039
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||| |||||||||||||||||||||  ||  |||||||||||||||| || ||||||| ||||| ||||  ||||||||||||||||| ||||||| ||    
T  55302848 aagattctttgtcattttaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaa 55302947  T
Q  201 aaattatttaataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagattt 282  Q
      ||| ||||||||||          ||||| |||| ||||||||| ||||||||||| || |||||| ||||||||||   ||||||||||    
T  55302948 ggattgtttaataaatcagattttgatggatattgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagattt 55303039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 102 - 297
Target Start/End: Complemental strand, 34228784 - 34228578
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaat-gtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||| |||||||||||| ||||||||  ||  |||||||||||| | | || ||||||||||||  ||||  ||||||||||||||||| ||||||| ||    
T  34228784 aagattctttgtcatttaaaaaaagtcatgtggtattcaatcaaaattcttaatcacttaaaaaaagtctagtggtattcaaaatcattgaaatttcgaa 34228685  T
Q  201 aaattatttaataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggat 290  Q
      ||| ||||||||||          |||||||||||||||||||| ||||||||||| || |||||| ||||||||||   |||||||||| ||  |||    
T  34228684 tgattgtttaataaatcagattttgatggattttgtaggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaagat 34228585  T
Q  291 tgttttt 297  Q
    |||||||    
T  34228584 tgttttt 34228578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 218 - 297
Target Start/End: Complemental strand, 36728023 - 36727945
Alignment:
Q  218 ggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggattgttttt 297  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||||| | |||||||||| ||| ||||||||||    
T  36728023 ggattttgtaggattttttagtgaaattttaacaagaaaaaatctttcatga-gacatgagattttttgagattgttttt 36727945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 102 - 234
Target Start/End: Original strand, 9163081 - 9163214
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcac-ttaaaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    ||||||||||||||||| |||||||| |||  |||||||||||||| |||||||||| | ||||| ||||  || |||||||||||||| ||||||| ||    
T  9163081 aagactctttgtcatttaaaaaaagtcttgtggtattcaatcaagatttttcatcacataaaaaaagtcttgtgatattcaaaatcattcaaatttcgaa 9163180  T
Q  201 aaattatttaataaattggattttgtaggatttt 234  Q
      ||| |||||||||||  ||||||  |||||||    
T  9163181 ggattgtttaataaattaaattttgatggatttt 9163214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 107 - 297
Target Start/End: Complemental strand, 30009873 - 30009672
Alignment:
Q  107 tctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactta-aaaatgtctcatggtattcaaaatcatttaaatttctaaaaatt 205  Q
    ||||| |||||| ||||||||  ||  |||||||||||||||| || |||||||| |||| ||||  ||||||||||||||||||||||||  ||  |||    
T  30009873 tctttatcatttaaaaaaagtcctgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcatttaaattttaaatgatt 30009774  T
Q  206 atttaataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggattgttt 295  Q
     ||||||||||          |||||||||| ||||||||| || |||||||| || |||||| ||||||||||   |||||||||| ||  ||||||||    
T  30009773 gtttaataaatcagattttgatggattttgtgggattttctagtaaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaagattgttt 30009674  T
Q  296 tt 297  Q
    ||    
T  30009673 tt 30009672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 109 - 218
Target Start/End: Complemental strand, 39307447 - 39307337
Alignment:
Q  109 tttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaat-gtctcatggtattcaaaatcatttaaatttctaaaaattat 207  Q
    |||| |||||||||||||| |||  |||||||||||||| | ||||||| |||||||  ||||  ||||||||| ||||||| ||||||||||| |||||    
T  39307447 tttgccattttaaaaaagtcttgtggtattcaatcaagattcttcatcatttaaaaaaagtcttgtggtattcataatcattcaaatttctaaagattat 39307348  T
Q  208 ttaataaattg 218  Q
    ||||| |||||    
T  39307347 ttaatgaattg 39307337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 102 - 234
Target Start/End: Original strand, 28541703 - 28541836
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||| |||||||||||| |||||||| | |  |||||||||||||||| || ||||||| ||||| ||||  ||||||||||||||||| ||||||| ||    
T  28541703 aagattctttgtcatttaaaaaaagtctcgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaa 28541802  T
Q  201 aaattatttaataaattggattttgtaggatttt 234  Q
      ||| ||||||||||  |||||||  |||||||    
T  28541803 tgattgtttaataaatcagattttgatggatttt 28541836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 109 - 282
Target Start/End: Complemental strand, 32951030 - 32950846
Alignment:
Q  109 tttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactta-aaaatgtctcatggtattcaaaatcatttaaatttctaaaaattat 207  Q
    |||||||||| ||||||||  ||  |||||||||||||||| || |||||||| |||| ||||  ||||||||||||||||| ||||||| ||  ||| |    
T  32951030 tttgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgt 32950931  T
Q  208 ttaataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagattt 282  Q
    |||||||||          || ||||||| ||||||||| ||||||||||| || |||||| ||||||||||   ||||||||||    
T  32950930 ttaataaatcagattttgatgaattttgtgggattttctagtgaaattttagcatgaaaaattctttcatgaaaacatgagattt 32950846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 102 - 234
Target Start/End: Complemental strand, 37046653 - 37046519
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactta--aaaatgtctcatggtattcaaaatcatttaaatttcta 199  Q
    |||| |||||||||||| ||||||||||||  |||||||||||||||| || ||||||||  |||| ||||  || |||| ||||||||| ||||||| |    
T  37046653 aagattctttgtcatttaaaaaaagttttgtggtattcaatcaagactcttaatcacttaaaaaaaagtctagtgatatttaaaatcattcaaatttcga 37046554  T
Q  200 aaaattatttaataaattggattttgtaggatttt 234  Q
    |  ||| ||||||||||  |||||||  |||||||    
T  37046553 aggattgtttaataaatcagattttgatggatttt 37046519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 109 - 234
Target Start/End: Original strand, 25446062 - 25446188
Alignment:
Q  109 tttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaatttctaaaaattat 207  Q
    |||||||||| |||||| | |||  |||||||||||||||| || ||||||| ||||| ||||  ||||||||||||||||| ||||||| ||  ||| |    
T  25446062 tttgtcatttaaaaaaattcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaatgattgt 25446161  T
Q  208 ttaataaattggattttgtaggatttt 234  Q
    |||||||||  |||||||  |||||||    
T  25446162 ttaataaatcagattttgatggatttt 25446188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 102 - 234
Target Start/End: Complemental strand, 19741109 - 19740976
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactta-aaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||| ||||||||||||  |||||||  ||  ||||||| ||||||||||| |||||||| |||| ||||  ||||||| ||||||||| ||||||| ||    
T  19741109 aagattctttgtcatttataaaaagtcatgtggtattcagtcaagacttttaatcacttaaaaaaagtcttgtggtattaaaaatcattcaaatttcgaa 19741010  T
Q  201 aaattatttaataaattggattttgtaggatttt 234  Q
      ||| ||||||||||| |||||||  |||||||    
T  19741009 ggattgtttaataaattagattttgatggatttt 19740976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 217 - 298
Target Start/End: Original strand, 48261258 - 48261339
Alignment:
Q  217 tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggattgttttta 298  Q
    |||||||||| ||||||| | ||| ||||||||||||||||||||||||||||    ||||||||| ||| |||||||||||    
T  48261258 tggattttgtgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaatatgagatttcttgagattgttttta 48261339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 102 - 225
Target Start/End: Original strand, 7007379 - 7007503
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||| ||| |||||||| ||||||||  ||  |||||||||||||||| || ||||||| ||||| ||||  ||||||||||||||||| ||||||| ||    
T  7007379 aagattctctgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaa 7007478  T
Q  201 aaattatttaataaattggattttg 225  Q
      ||| ||||||||||  |||||||    
T  7007479 ggattgtttaataaatcagattttg 7007503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 217 - 297
Target Start/End: Original strand, 24736466 - 24736546
Alignment:
Q  217 tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggattgttttt 297  Q
    ||||||||||  |||||||| |||||||||||||||||| || ||||||||||   |||||||||| ||| ||||||||||    
T  24736466 tggattttgtgagattttctagtgaaattttaacaagaagaagtctttcatgaaaacatgagatttcttgtgattgttttt 24736546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 110 - 216
Target Start/End: Original strand, 23464968 - 23465075
Alignment:
Q  110 ttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaa-atgtctcatggtattcaaaatcatttaaatttctaaaaattatt 208  Q
    ||||||||| ||||||||||||   ||||||||||||||| || ||||||||||| | ||||  |||||||||||| |||| ||||||| ||  ||| ||    
T  23464968 ttgtcatttaaaaaaagttttgtaatattcaatcaagactcttaatcacttaaaataagtctagtggtattcaaaaccattcaaatttcgaaggattgtt 23465067  T
Q  209 taataaat 216  Q
    ||||||||    
T  23465068 taataaat 23465075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 109 - 259
Target Start/End: Complemental strand, 41581982 - 41581823
Alignment:
Q  109 tttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaatttctaaaaattat 207  Q
    ||||||||||||||||||| |||  ||||||| | |||| ||||| | |||| ||||| ||||| ||||||| | | ||||| ||||||  || |||| |    
T  41581982 tttgtcattttaaaaaagtcttgtggtattcagttaagaattttcttaacttaaaaaaagtctcgtggtatttagagtcattcaaattttgaataattgt 41581883  T
Q  208 ttaataaattgg--------attttgtaggattttcttgtgaaattttaacaagaaaaaa 259  Q
    ||||||||||||        ||||||| ||||||||| |||||||||||||| |||||||    
T  41581882 ttaataaattggattgatatattttgtgggattttctagtgaaattttaacatgaaaaaa 41581823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 121 - 269
Target Start/End: Original strand, 1044831 - 1044990
Alignment:
Q  121 aaaaagttttgatgtattcaatcaagacttttcatcacttaaaaat-gtctcatggtattcaaaatcatttaaatttctaaaaattatttaataaat--- 216  Q
    ||||||| |||  |||||||||||||||| || ||||||||||||  ||||  |||||||||||| |||| || |||| ||  ||| ||||||||||       
T  1044831 aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaaccattcaactttcgaaggattgtttaataaatcag 1044930  T
Q  217 -------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatga 269  Q
           |||||||||| ||||||||| ||||||||||| || |||||| ||||||||||    
T  1044931 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatga 1044990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 217 - 297
Target Start/End: Original strand, 8711997 - 8712077
Alignment:
Q  217 tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggattgttttt 297  Q
    |||||||||| ||||||| | ||||||||||| ||||||||| |||||||| |   |||||||||| ||| ||||||||||    
T  8711997 tggattttgtgggattttatagtgaaattttagcaagaaaaagtctttcatcaaaacatgagatttcttgagattgttttt 8712077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 121 - 297
Target Start/End: Original strand, 42786708 - 42786895
Alignment:
Q  121 aaaaagttttgatgtattcaatcaagacttttcatcacttaaaaat-gtctcatggtattcaaaatcatttaaatttctaaaaattatttaataaat--- 216  Q
    ||||||| |||  |||||||||||||||| || |||| |||||||  ||||  ||||||||||||||||| ||||||| ||  ||| ||||||||||       
T  42786708 aaaaagtcttgtggtattcaatcaagactcttaatcatttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcat 42786807  T
Q  217 -------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggattgttttt 297  Q
           |||||||||| | ||||||| ||||||||||| ||  ||||| ||||||||||   |||||||||| ||  ||||||||||    
T  42786808 attttgatggattttgtggaattttctagtgaaattttatcataaaaaagtctttcatgaaaacatgagatttcttatgattgttttt 42786895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 102 - 165
Target Start/End: Complemental strand, 24131173 - 24131110
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaa 165  Q
    |||| |||||||||||| |||||||| |||  |||||||||||||||| || ||||||||||||    
T  24131173 aagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaa 24131110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 102 - 164
Target Start/End: Original strand, 11090354 - 11090416
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaa 164  Q
    |||| |||||| || || ||||||||||||  ||||||||||||||||||||||| |||||||    
T  11090354 aagaatctttgccacttaaaaaaagttttgtggtattcaatcaagacttttcatcgcttaaaa 11090416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 234
Target Start/End: Original strand, 53275851 - 53275977
Alignment:
Q  109 tttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaatttctaaaaattat 207  Q
    |||||||||| |||||||| |||  |||||||||||||| |||| ||||||| ||||| ||||  || |||| ||||||||| ||||||| ||  ||| |    
T  53275851 tttgtcatttaaaaaaagtcttgtagtattcaatcaagatttttaatcacttaaaaaaagtctagtgatatttaaaatcattcaaatttcgaaggattgt 53275950  T
Q  208 ttaataaattggattttgtaggatttt 234  Q
     ||||||||  |||||||  |||||||    
T  53275951 gtaataaatcagattttgatggatttt 53275977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 217 - 297
Target Start/End: Complemental strand, 24131057 - 24130976
Alignment:
Q  217 tggattttgtaggattttcttgtgaaattttaacaagaaaaaa-tctttcatgatgtcatgagatttattgggattgttttt 297  Q
    |||||||||| ||||||||| |||||||||||  | ||||||| ||||||||||   |||||||||| || |||||||||||    
T  24131057 tggattttgtgggattttctagtgaaattttaggatgaaaaaaatctttcatgaaaacatgagatttcttaggattgttttt 24130976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 135 - 225
Target Start/End: Original strand, 3436631 - 3436722
Alignment:
Q  135 tattcaatcaagacttttcatcacttaaaaatg-tctcatggtattcaaaatcatttaaatttctaaaaattatttaataaattggattttg 225  Q
    ||||||||||||||| || |||| |||||||   ||| |||||||||||||||||| ||||||| ||  ||| ||||||||||  |||||||    
T  3436631 tattcaatcaagactcttaatcatttaaaaaaaatctaatggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 3436722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 210 - 297
Target Start/End: Original strand, 11090428 - 11090515
Alignment:
Q  210 aataaattggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggattgttttt 297  Q
    ||||||||||||||||| ||||||| | ||||||||||| ||  ||||| ||||| || |   |||||||||| || |||||||||||    
T  11090428 aataaattggattttgtgggattttttagtgaaattttagcattaaaaagtctttaataaaaacatgagatttcttaggattgttttt 11090515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 144
Target Start/End: Original strand, 29855686 - 29855728
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatca 144  Q
    |||||| ||||||||||||||||| |||||| |||||||||||    
T  29855686 aagactgtttgtcattttaaaaaaattttgaggtattcaatca 29855728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 234
Target Start/End: Complemental strand, 25504807 - 25504707
Alignment:
Q  135 tattcaatcaagacttttcatcacttaaaaat-gtctcatggtattcaaaatcatttaaatttctaaaaattatttaataaattggattttgtaggattt 233  Q
    ||||||||||||||| || ||||||||||||  |||   || |||||||||||||| ||||||| ||  ||| ||||||||||  |||||||  ||||||    
T  25504807 tattcaatcaagactcttaatcacttaaaaaaagtccagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattt 25504708  T
Q  234 t 234  Q
    |    
T  25504707 t 25504707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 225
Target Start/End: Complemental strand, 27454207 - 27454155
Alignment:
Q  173 tggtattcaaaatcatttaaatttctaaaaattatttaataaattggattttg 225  Q
    ||||||||||||||||| ||||||  ||| ||||||||||||||  |||||||    
T  27454207 tggtattcaaaatcattcaaattttgaaagattatttaataaatcagattttg 27454155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 102; Significance: 1e-50; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 102 - 294
Target Start/End: Complemental strand, 18306161 - 18305968
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaat-gtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||||  ||||  ||||||||||||||||| ||||||| ||    
T  18306161 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaa 18306062  T
Q  201 aaattatttaataaattggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggattgtt 294  Q
    | ||| |||||||||||||||||||| ||||||| | ||| ||||||||||||||||| ||||||||||    ||||||||| ||| |||||||    
T  18306061 agattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtt 18305968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 102 - 297
Target Start/End: Original strand, 7466341 - 7466537
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaat-gtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||||||||| ||||||||  ||||  ||||||||||||||||| ||||||  ||    
T  7466341 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttaaaaaaagtcttgtggtattcaaaatcattcaaattttgaa 7466440  T
Q  201 aaattatttaataaattggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggattgttttt 297  Q
     |||| |||||||||||||||||||| ||||||| | ||| ||||||||||||||||| ||||||||||    ||||||||| ||| ||||||||||    
T  7466441 gaattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 7466537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 105 - 297
Target Start/End: Original strand, 32497534 - 32497727
Alignment:
Q  105 actctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaatttctaaaaa 203  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||| ||||  ||||||||||||||||| ||||||| ||  |    
T  32497534 actctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaatga 32497633  T
Q  204 ttatttaataaattggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggattgttttt 297  Q
    || |||||||||||||||||||| ||||||| | ||| ||||||||||||| ||| ||||||||||    ||||||||| ||| ||||||||||    
T  32497634 ttgtttaataaattggattttgtgggattttgtagtgtaattttaacaagagaaagtctttcatgaaaagatgagatttcttgagattgttttt 32497727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 102 - 297
Target Start/End: Original strand, 16362202 - 16362398
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaat-gtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||||||||| |||||||||  ||||| ||||||||||||||||| ||||||| ||    
T  16362202 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcattacttaaaaaaagtctcgtggtattcaaaatcattcaaatttcgaa 16362301  T
Q  201 aaattatttaataaattggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggattgttttt 297  Q
      ||| |||||||||||||||||||  ||||||| | ||| ||||||||||||||||||||||| || |    ||||||||| ||| ||||||||||    
T  16362302 ggattgtttaataaattggattttgatggattttgtagtgtaattttaacaagaaaaaatcttttataaaaagatgagatttcttgagattgttttt 16362398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 102 - 297
Target Start/End: Original strand, 41479103 - 41479299
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaat-gtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||| |||||||||||| |||||||| |||  |||||||||||||||| || ||||||||||||  |||| |||||||||||||||||| ||||||| ||    
T  41479103 aagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctaatggtattcaaaatcattcaaatttcgaa 41479202  T
Q  201 aaattatttaataaattggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggattgttttt 297  Q
      ||| ||||||||||  |||||||| ||||||||| || |||||||| || |||||||||||||||||   |||||||||| || |||||||||||    
T  41479203 tgattgtttaataaatcagattttgtgggattttctagtaaaattttagcatgaaaaaatctttcatgaaaacatgagatttcttaggattgttttt 41479299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 102 - 228
Target Start/End: Original strand, 31623701 - 31623828
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||| ||||  ||||||||||||||||| ||||||| ||    
T  31623701 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaa 31623800  T
Q  201 aaattatttaataaattggattttgtag 228  Q
      ||| ||||||||||||||||||||||    
T  31623801 ggattgtttaataaattggattttgtag 31623828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 102 - 297
Target Start/End: Complemental strand, 42305985 - 42305789
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaatg-tctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||||   |||  ||||||||||||| ||| ||||||| ||    
T  42305985 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaaatcttgtggtattcaaaataattcaaatttcgaa 42305886  T
Q  201 aaattatttaataaattggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggattgttttt 297  Q
      ||| |||||| |||||||||||   ||||||| | ||| ||||||||||||||||| || |||||||    ||||||||| ||| ||||||||||    
T  42305885 ggattgtttaatcaattggattttaatggattttgtagtgtaattttaacaagaaaaagtcattcatgaaaaaatgagatttcttgagattgttttt 42305789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 102 - 224
Target Start/End: Complemental strand, 19718081 - 19717958
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||||||||||| || ||||| ||||  ||||||||||||||||| ||||||| ||    
T  19718081 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaa 19717982  T
Q  201 aaattatttaataaattggatttt 224  Q
     |||| ||||||||||||||||||    
T  19717981 gaattgtttaataaattggatttt 19717958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 102 - 297
Target Start/End: Complemental strand, 39467668 - 39467462
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||||||||||| || ||||| ||||  ||||||||||||||||| ||||||| ||    
T  39467668 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaa 39467569  T
Q  201 aaattatttaataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggat 290  Q
      ||| ||||||||||          |||||||| | ||||||| | ||| ||||||||||||||||||||||||||||    ||||||||| ||| |||    
T  39467568 ggattgtttaataaattgaattttgatggattttatgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaagatgagattttttgagat 39467469  T
Q  291 tgttttt 297  Q
    |||||||    
T  39467468 tgttttt 39467462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 102 - 234
Target Start/End: Original strand, 26856072 - 26856206
Alignment:
Q  102 aagactctttgtcattttaaaaaagt-tttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaatttcta 199  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| ||||| ||||  ||||||||||||||||| ||||||| |    
T  26856072 aagactctttgtcattttaaaaaagtctttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcga 26856171  T
Q  200 aaaattatttaataaattggattttgtaggatttt 234  Q
    |  ||| |||||||||||||||||||  |||||||    
T  26856172 agtattgtttaataaattggattttgatggatttt 26856206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 102 - 298
Target Start/End: Complemental strand, 14782335 - 14782128
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||||||||||| || ||||| ||||  ||||||||||||||||| ||||||  ||    
T  14782335 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaattttgaa 14782236  T
Q  201 aaattatttaataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggat 290  Q
      ||| ||||||||||          |||||||||| ||||||| | ||| ||||||||||||||||| ||||||||||    ||||||||| ||| |||    
T  14782235 ggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagat 14782136  T
Q  291 tgttttta 298  Q
    ||||||||    
T  14782135 tgttttta 14782128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 102 - 298
Target Start/End: Complemental strand, 44726010 - 44725803
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||||||||||| || ||||| ||||  ||||||||||||||||| ||||||  ||    
T  44726010 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaattttgaa 44725911  T
Q  201 aaattatttaataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggat 290  Q
      ||| ||||||||||          |||||||||| ||||||| | ||| ||||||||||||||||| ||||||||||    ||||||||| ||| |||    
T  44725910 ggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagat 44725811  T
Q  291 tgttttta 298  Q
    ||||||||    
T  44725810 tgttttta 44725803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 102 - 297
Target Start/End: Complemental strand, 9288657 - 9288451
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactta-aaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||||||||||||||||||||||||| |||| |||||||||||| | ||||||||||||| |||| ||||  ||||||||||||||||| ||||||| ||    
T  9288657 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaaaaattttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaa 9288558  T
Q  201 aaattatttaataaattgg----------attttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggat 290  Q
      ||| |||||||||||||          ||||||| ||||||| | ||| ||||||||||||||||| ||||||||||    ||||||||| ||| |||    
T  9288557 ggattgtttaataaattggattttgatgaattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagat 9288458  T
Q  291 tgttttt 297  Q
    |||||||    
T  9288457 tgttttt 9288451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 121 - 297
Target Start/End: Original strand, 37857144 - 37857321
Alignment:
Q  121 aaaaagttttgatgtattcaatcaagacttttcatcacttaaaaat-gtctcatggtattcaaaatcatttaaatttctaaaaattatttaataaattgg 219  Q
    |||||||||||| ||||||||| |||| |||||||||||||||||  ||||  ||||||||||| ||||| ||||||  ||  ||| |||||||||||||    
T  37857144 aaaaagttttgaggtattcaattaagatttttcatcacttaaaaaaagtcttgtggtattcaaattcattcaaattttaaaggattgtttaataaattgg 37857243  T
Q  220 attttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggattgttttt 297  Q
    ||||||  ||||||| | ||| ||||| ||||||||||||||||||||||    ||||||||| ||| ||||||||||    
T  37857244 attttgatggattttgtagtgtaatttgaacaagaaaaaatctttcatgaaaagatgagatttcttgagattgttttt 37857321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 102 - 228
Target Start/End: Complemental strand, 4031458 - 4031331
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||| ||||||||||||||||||||| |||| |||||||||||||||||||||| | || ||||| ||||  ||||||||||||||||| ||||||| ||    
T  4031458 aagaatctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcataaattaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaa 4031359  T
Q  201 aaattatttaataaattggattttgtag 228  Q
      ||| ||||||||||||||||||||||    
T  4031358 ggattgtttaataaattggattttgtag 4031331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 102 - 224
Target Start/End: Complemental strand, 18958927 - 18958804
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||||||||| ||||||||||||||| |||| |||||||||||||||||||||||| || ||||| ||||  ||||||||||||||||| ||||||| ||    
T  18958927 aagactctttatcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaa 18958828  T
Q  201 aaattatttaataaattggatttt 224  Q
      ||| ||||||||||||||||||    
T  18958827 ggattgtttaataaattggatttt 18958804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 102 - 234
Target Start/End: Complemental strand, 10295581 - 10295448
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactta-aaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    ||||||||| |||| || |||||||| |||| |||||||||||||||||||||||||||| |||| ||||  ||||||||||||||||| ||||||| ||    
T  10295581 aagactcttcgtcacttaaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaa 10295482  T
Q  201 aaattatttaataaattggattttgtaggatttt 234  Q
      ||| |||||||||||||||||||  |||||||    
T  10295481 ggattgtttaataaattggattttgatggatttt 10295448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 102 - 297
Target Start/End: Original strand, 4403113 - 4403319
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    ||||||| || ||||||||||||| | |||| ||||||||| |||| |||||||||||| |||||  |||| ||||||||||||||||| ||||||| ||    
T  4403113 aagactcattttcattttaaaaaaatcttgaagtattcaattaagatttttcatcacttaaaaaaaatctcgtggtattcaaaatcattcaaatttcgaa 4403212  T
Q  201 aaattatttaataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggat 290  Q
      ||| ||||||||||          |||||||||| ||||||| | ||| ||||||||||||||||| ||||||||||    ||||||||| |||||||    
T  4403213 ggattgtttaataaattgggttttgatggattttgtgggattttttagtgtaattttaacaagaaaaagtctttcatgaaaatatgagatttcttgggat 4403312  T
Q  291 tgttttt 297  Q
    |||||||    
T  4403313 tgttttt 4403319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 102 - 297
Target Start/End: Complemental strand, 10392437 - 10392231
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaa-aaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||| ||||||||||||||||||| | |||   |||||||||||||||||| ||||||||| ||| ||||  ||||||||| ||||||| ||||||| ||    
T  10392437 aagattctttgtcattttaaaaaattcttgtgatattcaatcaagacttttaatcacttaagaaaagtctagtggtattcagaatcattcaaatttcgaa 10392338  T
Q  201 aaattatttaataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggat 290  Q
      ||| ||||||||||          |||||||||| ||||||||| ||||||||||| || |||||||||||||||||   ||||||||||||| ||||    
T  10392337 ggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaaatctttcatgaaaacatgagatttattaggat 10392238  T
Q  291 tgttttt 297  Q
    | |||||    
T  10392237 ttttttt 10392231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 102 - 297
Target Start/End: Complemental strand, 26374630 - 26374424
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactta-aaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||| |||||||||||| |||||||| |||  |||||||||||||||| || |||||||| |||| ||||  ||||||||||||||||| ||||||| ||    
T  26374630 aagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaa 26374531  T
Q  201 aaattatttaataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggat 290  Q
      ||| ||||||||||          |||||||||| ||||||||| ||||||||||| || |||||| ||||||||||   |||||||||| || ||||    
T  26374530 ggattgtttaataaataagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggat 26374431  T
Q  291 tgttttt 297  Q
    |||||||    
T  26374430 tgttttt 26374424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 102 - 297
Target Start/End: Complemental strand, 2705019 - 2704813
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactta-aaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||| |||||||||||| |||||||| |||  |||||||||||||||| || |||||||| |||| ||||  ||||||||||||||||| ||||||| ||    
T  2705019 aagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaa 2704920  T
Q  201 aaattatttaataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggat 290  Q
      ||| ||||||||||          |||||||||| ||||||||| |||| |||||| || |||||| ||||||||||   |||||||||| || ||||    
T  2704919 tgattgtttaataaatcaaattttgatggattttgtgggattttctagtgatattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggat 2704820  T
Q  291 tgttttt 297  Q
    |||||||    
T  2704819 tgttttt 2704813  T

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Target: chr8; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 102 - 297
Target Start/End: Complemental strand, 24502013 - 24501807
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactta-aaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||| ||||| |||||| |||||||| |||  |||||||||||||||| || |||||||| |||| ||||  ||||||||||||||||| ||||||| ||    
T  24502013 aagattctttatcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaa 24501914  T
Q  201 aaattatttaataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggat 290  Q
      ||| ||||||||||          |||||||||| ||||||||| ||||||||||| || |||||| ||||||||||   |||||||||| || ||||    
T  24501913 ggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggat 24501814  T
Q  291 tgttttt 297  Q
    |||||||    
T  24501813 tgttttt 24501807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 109 - 297
Target Start/End: Complemental strand, 42938310 - 42938111
Alignment:
Q  109 tttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactta-aaaatgtctcatggtattcaaaatcatttaaatttctaaaaattat 207  Q
    |||||||||| |||||||| |||  |||||||||||||||| || |||||||| |||| ||||  ||||||||||||||||| ||||||| ||  ||| |    
T  42938310 tttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgt 42938211  T
Q  208 ttaataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggattgttttt 297  Q
    |||||||||          |||||||||| ||||||||| ||||||||||| |  |||||| ||||||||||   |||||||||| || |||||||||||    
T  42938210 ttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcctgaaaaagtctttcatgaaaacatgagatttcttaggattgttttt 42938111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 102 - 297
Target Start/End: Original strand, 43959664 - 43959859
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||| ||||||||||||||||||||| ||| ||||||||||||||| | || ||||||| ||||| | ||  ||||||||||||||||| ||||||| ||    
T  43959664 aagattctttgtcattttaaaaaagtcttg-tgtattcaatcaagattcttaatcacttcaaaaaagactagtggtattcaaaatcattcaaatttcgaa 43959762  T
Q  201 aaattatttaataaattggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggattgttttt 297  Q
      ||| ||||||||||  |||||||  ||||||| | ||||||||||| || |||||| ||||| || |   |||||||||| ||  ||||||||||    
T  43959763 tgattgtttaataaatcagattttgatggattttgtggtgaaattttagcatgaaaaagtctttaattaaaacatgagatttcttatgattgttttt 43959859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 102 - 297
Target Start/End: Complemental strand, 5576821 - 5576614
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaatgtctca--tggtattcaaaatcatttaaatttcta 199  Q
    |||| |||||||||||| |||||||| |||  |||||||||||||||| || ||||||||||||    |||  ||||||||||||||||| ||||||| |    
T  5576821 aagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtcaagtggtattcaaaatcattcaaatttcga 5576722  T
Q  200 aaaattatttaataaa----------ttggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattggga 289  Q
    | |||| |||||||||           |||||||||| ||||||||| ||||||||||| || |||||| ||||| ||||   |||||||||| || |||    
T  5576721 agaattgtttaataaaccagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttagga 5576622  T
Q  290 ttgttttt 297  Q
    ||||||||    
T  5576621 ttgttttt 5576614  T

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Target: chr8; HSP #26
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 102 - 226
Target Start/End: Complemental strand, 32711482 - 32711357
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactta-aaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||| |||||||||||| |||||||| |||  |||||||||||||||| || |||||||| |||| ||||  ||||||||||||||||||||||||| ||    
T  32711482 aagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcatttaaatttcgaa 32711383  T
Q  201 aaattatttaataaattggattttgt 226  Q
      ||| ||||||||||  ||||||||    
T  32711382 ggattgtttaataaatcagattttgt 32711357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 102 - 297
Target Start/End: Complemental strand, 39190013 - 39189810
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaat-gtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||||||||||  |||| |||||||| |||  ||||||||| || ||| || |||| |||||||  |||||||| ||||||| |||||| ||||||| ||    
T  39190013 aagactctttgcaatttaaaaaaagtcttgtggtattcaataaaaactctttatcatttaaaaaaagtctcatg-tattcaacatcattcaaatttcgaa 39189915  T
Q  201 aaattatttaataaattg---------gattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggatt 291  Q
      ||| ||||||||||||         |||||||  | ||||||| || |||||||||||||||||||||||||||||   |||||||||| ||||||||    
T  39189914 ggattgtttaataaattgaatttgatggattttgatgaattttctagt-aaattttaacaagaaaaaatctttcatgaaaacatgagatttcttgggatt 39189816  T
Q  292 gttttt 297  Q
    ||||||    
T  39189815 gttttt 39189810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 110 - 297
Target Start/End: Complemental strand, 7507091 - 7506893
Alignment:
Q  110 ttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaat-gtctcatggtattcaaaatcatttaaatttctaaaaattatt 208  Q
    ||||||||| | |||||| |||  |||||||||||||||| || ||||||||||||  ||||  |||||||||||| |||| ||||||  ||  ||| ||    
T  7507091 ttgtcatttaagaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaaccattcaaattttgaaggattgtt 7506992  T
Q  209 taataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggattgttttt 297  Q
    ||||||||          |||||||||| ||||||||| ||||||||||| || |||||| |||||||||    |||||||||| || |||||||||||    
T  7506991 taataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgtaaacatgagatttcttaggattgttttt 7506893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 102 - 297
Target Start/End: Complemental strand, 42735477 - 42735271
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaat-gtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||| ||||| |||||| |||||||  |||  ||||||||| |||||| || ||||||||||||  ||||  ||||||||||||||||| ||||||| ||    
T  42735477 aagattctttatcatttaaaaaaagacttgtggtattcaattaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaa 42735378  T
Q  201 aaattatttaataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggat 290  Q
      ||| ||||||||||          |||||||||| ||||||||| ||||||||||| |  |||||| |||||||| |   |||||||||| || ||||    
T  42735377 gtattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcttgaaaaagtctttcataaaaacatgagatttcttaggat 42735278  T
Q  291 tgttttt 297  Q
    |||||||    
T  42735277 tgttttt 42735271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 109 - 297
Target Start/End: Original strand, 42937366 - 42937563
Alignment:
Q  109 tttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaat-gtctcatggtattcaaaatcatttaaatttctaaaaattat 207  Q
    |||||||||| |||||||| |||  ||||||||||  |||| || ||||||||||||  ||||  ||||||||||||||||| ||||||| ||  ||| |    
T  42937366 tttgtcatttaaaaaaagtcttgtggtattcaatc--gactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgt 42937463  T
Q  208 ttaataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggattgttttt 297  Q
    |||||||||          |||||||||| ||||||||| ||||||||||| ||  ||||| ||||||||||   |||||||||| ||  ||||||||||    
T  42937464 ttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcattaaaaagtctttcatgaaaacatgagatttcttatgattgttttt 42937563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 102 - 234
Target Start/End: Complemental strand, 43166890 - 43166757
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||||| ||||  |||| |||||||| |||  |||||||||||||||| ||  ||| || ||||| ||||  ||||||||||||||||| ||||||| ||    
T  43166890 aagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgtggtattcaaaatcattcaaatttcgaa 43166791  T
Q  201 aaattatttaataaattggattttgtaggatttt 234  Q
      ||| |||||||||||||||||||  |||||||    
T  43166790 ggattgtttaataaattggattttgatggatttt 43166757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 134 - 225
Target Start/End: Complemental strand, 4950183 - 4950092
Alignment:
Q  134 gtattcaatcaagacttttcatcacttaaaaatgtctcatggtattcaaaatcatttaaatttctaaaaattatttaataaattggattttg 225  Q
    |||||||||||| | ||||| ||| ||||||| ||||   |||||||||||||||| || |||| ||| ||||||||||||||| |||||||    
T  4950183 gtattcaatcaaaaattttcctcatttaaaaaagtcttggggtattcaaaatcattcaagtttcaaaagattatttaataaattagattttg 4950092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 102 - 297
Target Start/End: Complemental strand, 23115368 - 23115163
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactta-aaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||| |||||||||||| ||||| || |||  |||||||||||||||| || |||||||| |||| ||||  |||||||| |||||||| ||||||  ||    
T  23115368 aagattctttgtcatttaaaaaatgtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattc-aaatcattcaaatttggaa 23115270  T
Q  201 aaattatttaataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggat 290  Q
      ||| ||||||||||          |||||||||| |||||||||  |||||||||  || |||||| ||||||||||   |||||||||  || ||||    
T  23115269 ggattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttggcatgaaaaagtctttcatgaaaacatgagattccttaggat 23115170  T
Q  291 tgttttt 297  Q
    |||||||    
T  23115169 tgttttt 23115163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 224
Target Start/End: Complemental strand, 9770545 - 9770497
Alignment:
Q  176 tattcaaaatcatttaaatttctaaaaattatttaataaattggatttt 224  Q
    |||||||||| ||| ||||||| || |||||||||||||||||||||||    
T  9770545 tattcaaaataattcaaatttcaaagaattatttaataaattggatttt 9770497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 165
Target Start/End: Complemental strand, 9771017 - 9770954
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaa 165  Q
    |||| ||||| |||||| ||||||||   | |||||||||||||||||||| ||||||||||||    
T  9771017 aagaatctttctcatttaaaaaaagtcacgttgtattcaatcaagactttttatcacttaaaaa 9770954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 297
Target Start/End: Complemental strand, 10295443 - 10295374
Alignment:
Q  228 ggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggattgttttt 297  Q
    ||||||| | ||| ||||||||||||||||| ||||||||||    ||||||||| ||| ||||||||||    
T  10295443 ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 10295374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 234
Target Start/End: Complemental strand, 13478397 - 13478317
Alignment:
Q  154 atcacttaaaaatgtctcatggtattcaaaatcatttaaatttctaaaaattatttaataaattggattttgtaggatttt 234  Q
    |||| ||||||| ||||  | |||||||||||| |||||||||| ||  ||| ||||||||||| ||||| || |||||||    
T  13478397 atcatttaaaaaagtcttgtagtattcaaaatcttttaaatttcgaaggattgtttaataaattagatttcgttggatttt 13478317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 102; Significance: 1e-50; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 101 - 297
Target Start/End: Complemental strand, 40460908 - 40460711
Alignment:
Q  101 taagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaat-gtctcatggtattcaaaatcatttaaatttcta 199  Q
    ||||||||||||||||||||||||||| ||||  |||||||||||||||||||||||||||||||  ||||  ||||||||||||||||| ||||||| |    
T  40460908 taagactctttgtcattttaaaaaagtcttgagatattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcga 40460809  T
Q  200 aaaattatttaataaattggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggattgttttt 297  Q
    |  ||| |||||||||||||||||||  ||||||| | ||| ||||||||||||||||||||||||||||    ||||||||| ||| ||||||||||    
T  40460808 atgattgtttaataaattggattttgatggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaatatgagatttcttgagattgttttt 40460711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 102 - 269
Target Start/End: Original strand, 19251539 - 19251707
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaat-gtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||||||||||||||||||||||||| |||| |||||||||||| | |||||||||||||||||  ||||| ||||||||||||||||| ||||||| ||    
T  19251539 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaaaatttttcatcacttaaaaaaagtctcgtggtattcaaaatcattcaaatttcgaa 19251638  T
Q  201 aaattatttaataaattggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatga 269  Q
      ||| |||||||||||||||||||  ||||||||||||||||||||| ||| ||||| ||||||||||    
T  19251639 ggattgtttaataaattggattttgatggattttcttgtgaaattttagcaataaaaagtctttcatga 19251707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 102 - 297
Target Start/End: Complemental strand, 44122100 - 44121904
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaatg-tctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||   |||  ||||||||||||||||| ||||||| ||    
T  44122100 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaaatcttgtggtattcaaaatcattcaaatttcgaa 44122001  T
Q  201 aaattatttaataaattggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggattgttttt 297  Q
      ||| |||||||||||||||||||  ||||||| | ||| ||||||||||||||||| ||||| ||||    ||||||||| ||| ||||||||||    
T  44122000 ggattgtttaataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtctttaatgaaaagatgagattttttgagattgttttt 44121904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 102 - 298
Target Start/End: Original strand, 509656 - 509853
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaat-gtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||||| ||||||||||||||||||| |||| |||||||||||||||||||||||| |||||||  ||||  ||||||||||||||||| ||||||| ||    
T  509656 aagactatttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaa 509755  T
Q  201 aaattatttaataaattggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggattgttttta 298  Q
      ||| |||||||||||||||||||  ||||||| | |||  |||||||||||||||| ||||||||||    ||||||||| ||| |||||||||||    
T  509756 cgattgtttaataaattggattttgatggattttgtagtgggattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttta 509853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 102 - 234
Target Start/End: Original strand, 33382637 - 33382770
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| ||    
T  33382637 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcatggtattcaaaatcatttaaatttcgaa 33382736  T
Q  201 aaattatttaataaattggattttgtaggatttt 234  Q
      ||| |||||||||||||||||||  |||||||    
T  33382737 ggattgtttaataaattggattttgatggatttt 33382770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 102 - 258
Target Start/End: Complemental strand, 46405631 - 46405474
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactta-aaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    ||||||||||||| |||||||||||| |||| |||||||||||||||||||||||||||| |||| ||||  ||||||||||||||||| ||||||| ||    
T  46405631 aagactctttgtcgttttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcaaa 46405532  T
Q  201 aaattatttaataaattggattttgtaggattttcttgtgaaattttaacaagaaaaa 258  Q
      ||| |||||||||||||||||||  ||||||| | ||| |||||||||||||||||    
T  46405531 tgattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaa 46405474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 102 - 297
Target Start/End: Original strand, 9179880 - 9180076
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaat-gtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||| |||||||||||| ||||||||||||  |||||||||||||||| |||||||||||||||  ||||  |||||| |||||||| ||||||| | ||    
T  9179880 aagattctttgtcatttaaaaaaagttttgtcgtattcaatcaagactcttcatcacttaaaaaaagtcttgtggtatacaaaatcacttaaattccgaa 9179979  T
Q  201 aaattatttaataaattggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggattgttttt 297  Q
      ||| |||||||||||||||||||| ||||||||| ||||| ||||| ||  ||||| ||||||||||   |||||||||| || |||||||||||    
T  9179980 ggattgtttaataaattggattttgtgggattttctagtgaatttttagcataaaaaagtctttcatgaaaacatgagatttcttaggattgttttt 9180076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 102 - 269
Target Start/End: Original strand, 37327927 - 37328095
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||||||||| |||| ||||| ||||  ||||||||||||||||| ||||||| ||    
T  37327927 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcattacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcaaa 37328026  T
Q  201 aaattatttaataaattggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatga 269  Q
      ||| |||||||||||| ||||||  ||||||| | ||  ||||||||||| ||||| ||||||||||    
T  37328027 ggattgtttaataaattgaattttgatggattttgtagtataattttaacaaaaaaaagtctttcatga 37328095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 102 - 298
Target Start/End: Original strand, 39784099 - 39784306
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||||||||||| || ||||| ||||  ||||||||||||||||||||||||| ||    
T  39784099 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcatttaaatttcgaa 39784198  T
Q  201 aaattatttaataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggat 290  Q
      ||| ||||||||||          |||||||||| ||||||| | ||| ||||||||||||||||| ||||||||||    ||||||||| ||| |||    
T  39784199 ggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagat 39784298  T
Q  291 tgttttta 298  Q
    ||||||||    
T  39784299 tgttttta 39784306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 105 - 267
Target Start/End: Complemental strand, 33892447 - 33892284
Alignment:
Q  105 actctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaa-aatgtctcatggtattcaaaatcatttaaatttctaaaaa 203  Q
    ||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| || ||||  ||||||||||||||||| ||||||| ||  |    
T  33892447 actctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaacaaagtcttgtggtattcaaaatcattcaaatttcgaatga 33892348  T
Q  204 ttatttaataaattggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcat 267  Q
    || || |||||||||||||||   | ||||| | ||| ||||||||||||||||| ||||||||    
T  33892347 ttgttaaataaattggatttttatgaattttgtagtgtaattttaacaagaaaaagtctttcat 33892284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 102 - 234
Target Start/End: Complemental strand, 9882436 - 9882303
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactta-aaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| |||| ||||  ||||||||||||||||| ||||||| ||    
T  9882436 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaa 9882337  T
Q  201 aaattatttaataaattggattttgtaggatttt 234  Q
      ||| |||||||||||||||||||  |||||||    
T  9882336 tgattgtttaataaattggattttgatggatttt 9882303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 102 - 264
Target Start/End: Complemental strand, 3797257 - 3797093
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactta-aaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| |||| ||||  |||||||||| |||||| ||||||  ||    
T  3797257 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaagatcattaaaattttgaa 3797158  T
Q  201 aaattatttaataaattggattttg-taggattttcttgtgaaattttaacaagaaaaaatcttt 264  Q
      ||| ||||||||||| ||||||| | ||||||||| ||||||||||| || |||||| |||||    
T  3797157 ggattgtttaataaattagattttgatgggattttctagtgaaattttagcatgaaaaagtcttt 3797093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 105 - 297
Target Start/End: Original strand, 8675336 - 8675539
Alignment:
Q  105 actctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaatttctaaaaa 203  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||| ||||  ||||||||||||||||||||| ||| ||  |    
T  8675336 actctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcatttaaacttcgaagga 8675435  T
Q  204 ttatttaataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggattgt 293  Q
    || ||||||||||          |||||||||| ||||||| | ||| ||||||||||||||||||||||| ||||    ||||||||| ||| ||||||    
T  8675436 ttgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatcttttatgaaaagatgagatttcttgagattgt 8675535  T
Q  294 tttt 297  Q
    ||||    
T  8675536 tttt 8675539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 102 - 298
Target Start/End: Original strand, 23101298 - 23101505
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||||||||||| || ||||| ||||  ||||||||||||||||| ||||||| ||    
T  23101298 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaa 23101397  T
Q  201 aaattatttaataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggat 290  Q
      ||| ||||||||||          |||||||||| ||||||| | ||| ||||||||||||||||| ||||||||||    ||||||||| ||| |||    
T  23101398 ggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagat 23101497  T
Q  291 tgttttta 298  Q
    ||||||||    
T  23101498 tgttttta 23101505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 102 - 269
Target Start/End: Original strand, 39028097 - 39028265
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||||||||||||||||||||||||| ||||  |||||||||||||||||||||||||| ||||| ||||  || ||||||||||| || ||||| | ||    
T  39028097 aagactctttgtcattttaaaaaagtcttgagatattcaatcaagacttttcatcacttaaaaaaagtcttgtgttattcaaaatcgttcaaattacgaa 39028196  T
Q  201 aaattatttaataaattggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatga 269  Q
    | ||| |||||||||||||||||||  ||||||| | ||| || |||||||||||||| | ||||||||    
T  39028197 agattgtttaataaattggattttgatggattttgtagtgtaactttaacaagaaaaagtttttcatga 39028265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 102 - 234
Target Start/End: Original strand, 18838389 - 18838522
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||||||||||| ||||||||||||| |||| ||||||||||||||||||||||| ||| ||||| ||||  ||||||||||||||||| ||||||| ||    
T  18838389 aagactctttgtaattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaa 18838488  T
Q  201 aaattatttaataaattggattttgtaggatttt 234  Q
    | ||| |||||||||||||||||||  |||||||    
T  18838489 agattgtttaataaattggattttgatggatttt 18838522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 102 - 298
Target Start/End: Original strand, 28342347 - 28342554
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||||||||||||||||||||||||| |||| |||||||||| ||||||||||||| || ||||| ||||  ||||||||||||||||| ||||||| ||    
T  28342347 aagactctttgtcattttaaaaaagtcttgaggtattcaatcgagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaa 28342446  T
Q  201 aaattatttaataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggat 290  Q
      ||| ||||||||||          |||||||||| ||||||| | ||| ||||||||||||||||| ||||||||||    ||||||||| ||| |||    
T  28342447 ggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagat 28342546  T
Q  291 tgttttta 298  Q
    ||||||||    
T  28342547 tgttttta 28342554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 102 - 267
Target Start/End: Original strand, 29585515 - 29585680
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaat-gtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||| ||||||||||||||||||||| |||| |||||||||||| |||||| ||||||||||||  ||||  ||||||||||||||||| ||||||  ||    
T  29585515 aagattctttgtcattttaaaaaagtcttgaggtattcaatcaaaactttt-atcacttaaaaaaagtcttctggtattcaaaatcattcaaattttgaa 29585613  T
Q  201 aaattatttaataaattggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcat 267  Q
      ||| |||||||| ||||||||||  ||||||| | ||| ||||||||||||||||| ||||||||    
T  29585614 ggattgtttaataatttggattttgatggattttgtagtgtaattttaacaagaaaaagtctttcat 29585680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 102 - 234
Target Start/End: Original strand, 3022926 - 3023059
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||||| ||||||||||||||||||| |||| |||||||||||||| |||||||||||| ||||| ||||  ||||||||||||||||| ||||||| ||    
T  3022926 aagactttttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaa 3023025  T
Q  201 aaattatttaataaattggattttgtaggatttt 234  Q
      ||| |||||||||||||||||||  |||||||    
T  3023026 ggattgtttaataaattggattttgatggatttt 3023059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 102 - 234
Target Start/End: Complemental strand, 29614964 - 29614831
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||||||||||| || ||||| ||||  || |||||||||||||| ||||||| ||    
T  29614964 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtgatattcaaaatcattcaaatttcgaa 29614865  T
Q  201 aaattatttaataaattggattttgtaggatttt 234  Q
      ||| |||||||||||||||||||  |||||||    
T  29614864 ggattgtttaataaattggattttgatggatttt 29614831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 102 - 225
Target Start/End: Original strand, 7993142 - 7993266
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    ||||||||||| |||||||||||||| |||| |||||||||||| |||||||||||||| ||||| |||| |||||||||||||||||| ||||||| ||    
T  7993142 aagactctttgccattttaaaaaagtcttgaggtattcaatcaaaacttttcatcacttaaaaaaagtcttatggtattcaaaatcattcaaatttcgaa 7993241  T
Q  201 aaattatttaataaattggattttg 225  Q
      ||| |||||||||||| ||||||    
T  7993242 ggattgtttaataaattgaattttg 7993266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 102 - 228
Target Start/End: Complemental strand, 17001223 - 17001096
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaatg-tctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||||||||||||||||| ||||||| |||| ||||||||| ||||||||||||||||||||||   | || ||||||||||||||||| ||||||| ||    
T  17001223 aagactctttgtcatttttaaaaagtcttgaggtattcaataaagacttttcatcacttaaaaaaaatatcgtggtattcaaaatcattcaaatttcgaa 17001124  T
Q  201 aaattatttaataaattggattttgtag 228  Q
      ||| ||||||||||||||||||||||    
T  17001123 ggattgtttaataaattggattttgtag 17001096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 102 - 248
Target Start/End: Complemental strand, 44623476 - 44623329
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    ||||||||||||||||| |||||||| |||  ||||| |||||||||| |||||||||| ||||| ||||| || |||||||||||||| | ||||||||    
T  44623476 aagactctttgtcatttaaaaaaagtcttgtggtatttaatcaagactcttcatcactttaaaaaggtctcgtgatattcaaaatcattcatatttctaa 44623377  T
Q  201 aaattatttaataaattggattttgtaggattttcttgtgaaatttta 248  Q
    | | | |||||||||||| ||||||| | ||||||| |||||||||||    
T  44623376 agactgtttaataaattgaattttgtggaattttctagtgaaatttta 44623329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 102 - 234
Target Start/End: Complemental strand, 28035005 - 28034872
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactta-aaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||||| ||||||||||||||||||| ||||  ||||||||||||||||||||||||||| |||| ||||  ||||||||||||| ||| ||||||| ||    
T  28035005 aagactttttgtcattttaaaaaagtcttgagatattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaattattcaaatttcaaa 28034906  T
Q  201 aaattatttaataaattggattttgtaggatttt 234  Q
      ||| |||||||||||||||||||  |||||||    
T  28034905 ggattgtttaataaattggattttgatggatttt 28034872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 102 - 225
Target Start/End: Original strand, 32883782 - 32883906
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||||| ||||||||||||||||||| |||| ||||||||| ||||||||||||||||| ||||| ||||  ||||||||||||||||| ||||||| ||    
T  32883782 aagactttttgtcattttaaaaaagtcttgaagtattcaattaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaa 32883881  T
Q  201 aaattatttaataaattggattttg 225  Q
      ||| |||| ||||||||||||||    
T  32883882 tgattgtttattaaattggattttg 32883906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 102 - 297
Target Start/End: Original strand, 12893415 - 12893621
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaat-gtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||| |||||||||||| |||||||| |||  ||||| |||||||||| || ||||||||||||  |||| |||||||||||||||||| ||||||| ||    
T  12893415 aagattctttgtcatttaaaaaaagtcttgtggtatttaatcaagactcttaatcacttaaaaaaagtctaatggtattcaaaatcattcaaatttcgaa 12893514  T
Q  201 aaattatttaataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggat 290  Q
     |||| ||||||||||          ||||||||||  |||||||| ||||||||||| || |||||| ||||||||||   |||||||||| || ||||    
T  12893515 gaattgtttaataaatcagattttgatggattttgtgagattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggat 12893614  T
Q  291 tgttttt 297  Q
    |||||||    
T  12893615 tgttttt 12893621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 102 - 297
Target Start/End: Complemental strand, 40996849 - 40996643
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||| |||||||||||| |||||||| |||  |||||||||||||||| || ||| ||| ||||| ||||  ||||||||||||||||| ||||||| ||    
T  40996849 aagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcgcttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaa 40996750  T
Q  201 aaattatttaataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggat 290  Q
      ||| ||||||||||          |||||||||||||||||||| ||||||||||| || |||||| ||||||||||   |||||||||| || ||||    
T  40996749 ggattgtttaataaatcagattttgatggattttgtaggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggat 40996650  T
Q  291 tgttttt 297  Q
    |||||||    
T  40996649 tgttttt 40996643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 150 - 297
Target Start/End: Complemental strand, 43187509 - 43187351
Alignment:
Q  150 tttcatcacttaaaaat-gtctcatggtattcaaaatcatttaaatttctaaaaattatttaataaattggattttg----------taggattttcttg 238  Q
    ||||||||||||||||  ||||||||||||||||||||||| ||||||  ||  ||| |||||||||||||||||||          | ||||||||| |    
T  43187509 tttcatcacttaaaaaaagtctcatggtattcaaaatcattcaaattttgaagcattgtttaataaattggattttgatgaattttgtcggattttctag 43187410  T
Q  239 tgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggattgttttt 297  Q
    |||||||||||||||||||| |||||||||| | |||||||||| ||||||||||||||    
T  43187409 tgaaattttaacaagaaaaagtctttcatgaagacatgagattttttgggattgttttt 43187351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 102 - 297
Target Start/End: Complemental strand, 43581290 - 43581084
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactta-aaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||| |||||||||||| |||||||| ||| ||||||||||||||||| || |||||||| |||| ||||  ||||||||||||||||| ||||||| ||    
T  43581290 aagattctttgtcatttaaaaaaagtcttgttgtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaa 43581191  T
Q  201 aaattatttaataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggat 290  Q
      ||| ||||||||||          |||||||||| ||||||||| ||||||||||| || |||||| ||||||||||   |||||||||| || ||||    
T  43581190 ggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggat 43581091  T
Q  291 tgttttt 297  Q
    | |||||    
T  43581090 tattttt 43581084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 102 - 223
Target Start/End: Complemental strand, 44256966 - 44256844
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactta-aaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||||| ||||||||||||||||| | || | |||||||||||||||||||||||||||| |||| || || ||||||||||||||||| ||||||| ||    
T  44256966 aagactttttgtcattttaaaaaaatcttaaggtattcaatcaagacttttcatcacttaaaaaaagtatcgtggtattcaaaatcattcaaatttcgaa 44256867  T
Q  201 aaattatttaataaattggattt 223  Q
      ||| |||||||||||||||||    
T  44256866 tgattgtttaataaattggattt 44256844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 105 - 228
Target Start/End: Original strand, 47066706 - 47066831
Alignment:
Q  105 actctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt--aaaaatgtctcatggtattcaaaatcatttaaatttctaaaa 202  Q
    ||||||||||||||||||||||| |||| |||||||||||| |  |||||||||||  ||||| ||||  ||||||||||||||||| ||||||| ||      
T  47066706 actctttgtcattttaaaaaagtcttgacgtattcaatcaaaaaatttcatcacttaaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaagg 47066805  T
Q  203 attatttaataaattggattttgtag 228  Q
    ||| ||||||||||||||||||||||    
T  47066806 attgtttaataaattggattttgtag 47066831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 102 - 234
Target Start/End: Original strand, 12963701 - 12963834
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||||||||||||||||||||||||| ||||  ||||||||||||| ||||||| |||| ||||| ||||| |||||| |||||||||| ||||||| ||    
T  12963701 aagactctttgtcattttaaaaaagtcttgagatattcaatcaagatttttcattacttaaaaaaagtctcgtggtatccaaaatcattcaaatttcgaa 12963800  T
Q  201 aaattatttaataaattggattttgtaggatttt 234  Q
      ||| ||||||||||| |||||||  |||||||    
T  12963801 ggattgtttaataaattagattttgatggatttt 12963834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 102 - 297
Target Start/End: Original strand, 10068466 - 10068673
Alignment:
Q  102 aagactctttgtcattttaaaaaagt-tttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaatttcta 199  Q
    ||||||||||| |||||||||||||| ||||| |||||||||||||| |||||||||||| ||||| ||||  ||||||||||||||||| ||||||  |    
T  10068466 aagactctttgccattttaaaaaagtctttgaggtattcaatcaagatttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaattttga 10068565  T
Q  200 aaaattatttaataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattggga 289  Q
    |  ||| ||||||||||          |||||||||| ||||||||| ||||||||||| || |||||| | |||||| |   |||||||||| || |||    
T  10068566 aggattgtttaataaattaaattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtatttcataaaaacatgagatttgttagga 10068665  T
Q  290 ttgttttt 297  Q
    ||||||||    
T  10068666 ttgttttt 10068673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 102 - 297
Target Start/End: Original strand, 973191 - 973397
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaatgtctca-tggtattcaaaatcatttaaatttctaa 200  Q
    |||| |||||||||||| |||||||| |||  |||||||||||||||| || ||||||||||||    | | ||||||||||||||||| ||||||| ||    
T  973191 aagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatttagtggtattcaaaatcattcaaatttcgaa 973290  T
Q  201 aaattatttaataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggat 290  Q
      ||| ||||||||||          |||||||||| ||||||||| ||||||||||| ||||||||| ||||||||||   |||||||||| || ||||    
T  973291 ggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggat 973390  T
Q  291 tgttttt 297  Q
    |||||||    
T  973391 tgttttt 973397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 115 - 297
Target Start/End: Complemental strand, 7718549 - 7718356
Alignment:
Q  115 attttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaat-gtctcatggtattcaaaatcatttaaatttctaaaaattatttaata 213  Q
    |||| |||||||| |||  |||||||||||||||| || ||||||||||||  ||||  ||||||||||||||||| ||||||| ||  ||| |||||||    
T  7718549 atttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaata 7718450  T
Q  214 aat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggattgttttt 297  Q
    |||          |||||||||| ||||||||| ||||||||||| || |||||||||||||||||   |||||||||| || |||||||||||    
T  7718449 aatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaaatctttcatgaaaacatgagatttcttaggattgttttt 7718356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 102 - 223
Target Start/End: Complemental strand, 10676620 - 10676498
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactta-aaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||||||||||  |||| ||||| || |||  |||||||||||||||||||||||||||| |||| ||||||| ||||||||||||||| ||||||| ||    
T  10676620 aagactctttgcaatttaaaaaaggtcttgtggtattcaatcaagacttttcatcacttaaaaaaagtctcattgtattcaaaatcattcaaatttcgaa 10676521  T
Q  201 aaattatttaataaattggattt 223  Q
      ||| |||||||||||||||||    
T  10676520 ggattgtttaataaattggattt 10676498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 109 - 297
Target Start/End: Complemental strand, 7719453 - 7719254
Alignment:
Q  109 tttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaatg-tctcatggtattcaaaatcatttaaatttctaaaaattat 207  Q
    |||||||||| |||||||| |||  |||||||||||||||| || ||||||||||||   |||  ||||||||||||||||| ||||||| ||  ||| |    
T  7719453 tttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatctagtggtattcaaaatcattcaaatttcgaatgattgt 7719354  T
Q  208 ttaataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggattgttttt 297  Q
    |||||||||          |||||||||| ||||||||| ||||||||||| || |||||| ||||||||||   |||||||||| || |||||||||||    
T  7719353 ttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgttttt 7719254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 110 - 297
Target Start/End: Original strand, 34695288 - 34695486
Alignment:
Q  110 ttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaat-gtctcatggtattcaaaatcatttaaatttctaaaaattatt 208  Q
    ||||||||| ||||||||||||  |||||||||||||||| || ||||||||||||  |||   |||||||||||| |||| ||||||| ||  ||| ||    
T  34695288 ttgtcatttaaaaaaagttttgtggtattcaatcaagactcttaatcacttaaaaaaagtccagtggtattcaaaaccattcaaatttcgaaggattgtt 34695387  T
Q  209 taataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggattgttttt 297  Q
    ||||||||          |||||||||| ||||||||| ||||||||||| || |||||| ||||||||||   |||||||||| || |||||||||||    
T  34695388 taataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgttttt 34695486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 107 - 297
Target Start/End: Complemental strand, 18914930 - 18914729
Alignment:
Q  107 tctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaat-gtctcatggtattcaaaatcatttaaatttctaaaaatt 205  Q
    |||||||| ||| |||||||| |||  |||||||||||||||| || ||||||||||||  ||||  ||||||||||||||||| ||||||| ||   ||    
T  18914930 tctttgtcctttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcaaaggttt 18914831  T
Q  206 atttaataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggattgttt 295  Q
     ||||||||||          |||||||||| ||||||||| ||||||||||| || |||||| ||||||||||   |||||||||| || |||||||||    
T  18914830 gtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgttt 18914731  T
Q  296 tt 297  Q
    ||    
T  18914730 tt 18914729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 107 - 269
Target Start/End: Original strand, 727524 - 727688
Alignment:
Q  107 tctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaatg--tctcatggtattcaaaatcatttaaatttctaaaaat 204  Q
    |||||||||||| |||||||| |||   ||||||||||| ||| || ||||||||||||    |||  | ||||||||||||||| ||||||| ||  ||    
T  727524 tctttgtcatttaaaaaaagtcttgtgatattcaatcaaaactctttatcacttaaaaaaaaatctagtagtattcaaaatcattcaaatttcaaaggat 727623  T
Q  205 tatttaataaattggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatga 269  Q
    | ||||||||||  |||||||| ||||||||| ||||||||||| || |||||| ||||||||||    
T  727624 tgtttaataaatcagattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatga 727688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 102 - 225
Target Start/End: Original strand, 12740373 - 12740496
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||| ||||||||||||| ||||||| |||| ||||| |||||||| ||||||||| || ||||| ||||| ||||||||||||||||| ||||||| ||    
T  12740373 aagattctttgtcatttttaaaaagtcttgaggtatttaatcaagatttttcatcatttaaaaaaagtctcgtggtattcaaaatcattcaaatttcaaa 12740472  T
Q  201 aaattatttaataaattggattttg 225  Q
      ||| ||||||||| |||||||||    
T  12740473 ggattgtttaataaa-tggattttg 12740496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 102 - 297
Target Start/End: Original strand, 30440803 - 30441009
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||| |||||||||||| |||||| | |||  |||||||||||||||| || ||||||| ||||| ||||  ||||||||||||||||| ||||||| ||    
T  30440803 aagattctttgtcatttaaaaaaaatcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaa 30440902  T
Q  201 aaattatttaataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggat 290  Q
      ||| ||||||||||          |||||||||| ||||||||| |||||||||||  | |||||| |||||| |||   |||||||||| || ||||    
T  30440903 ggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagtatgaaaaagtctttcgtgaaaacatgagatttcttaggat 30441002  T
Q  291 tgttttt 297  Q
    |||||||    
T  30441003 tgttttt 30441009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 102 - 297
Target Start/End: Original strand, 47914273 - 47914479
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||| |||||||||||| ||||||||  ||  |||||||||||||||| || ||||||| ||||| ||||  || |||||||||||||| ||||||| ||    
T  47914273 aagattctttgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaaaatcattcaaatttcgaa 47914372  T
Q  201 aaattatttaataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggat 290  Q
      ||| ||||||||||          |||||||||| ||||||||| ||||||||||| || |||||| ||||||||||   |||||||||| ||  |||    
T  47914373 ggattgtttaataaataagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaagat 47914472  T
Q  291 tgttttt 297  Q
    |||||||    
T  47914473 tgttttt 47914479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 176 - 298
Target Start/End: Original strand, 19810874 - 19810996
Alignment:
Q  176 tattcaaaatcatttaaatttctaaaaattatttaataaattggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcat 275  Q
    |||||||||||||| ||||||| ||  ||| |||||||||||||||||||| | ||||||| ||||||||||| ||  ||||  ||||||||||   |||    
T  19810874 tattcaaaatcattcaaatttcaaatgattgtttaataaattggattttgtggaattttctagtgaaattttagcataaaaatgtctttcatgaaaacat 19810973  T
Q  276 gagatttattgggattgttttta 298  Q
    ||||||| ||| |||||||||||    
T  19810974 gagatttcttgagattgttttta 19810996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 110 - 297
Target Start/End: Complemental strand, 20275455 - 20275257
Alignment:
Q  110 ttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaat-gtctcatggtattcaaaatcatttaaatttctaaaaattatt 208  Q
    ||||||||| |||||||| ||   |||||||||||||||| || ||||||||||||  |||| |||||||||||||||||| ||||||| ||  ||| ||    
T  20275455 ttgtcatttaaaaaaagtcttatggtattcaatcaagactcttaatcacttaaaaaaagtcttatggtattcaaaatcattcaaatttcgaaggattgtt 20275356  T
Q  209 taataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggattgttttt 297  Q
    ||||||||          |||||||||| ||||||| | ||||||||||| || |||||| ||| ||||||   |||||||||| || | |||||||||    
T  20275355 taataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtctgtcatgaaagcatgagatttcttagcattgttttt 20275257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 102 - 165
Target Start/End: Original strand, 29893081 - 29893144
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaa 165  Q
    |||||||||||||||||||||| |||  ||| ||||||||||||||||||||||||||||||||    
T  29893081 aagactctttgtcattttaaaacagtcatgaggtattcaatcaagacttttcatcacttaaaaa 29893144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 102 - 297
Target Start/End: Complemental strand, 44343596 - 44343390
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaat-gtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||| |||||||||||| |||||||| |||   ||||||||||||||| || ||||||||||||  || |  ||||||| ||||||||| ||||||| ||    
T  44343596 aagattctttgtcatttaaaaaaagtcttgtgatattcaatcaagactcttaatcacttaaaaaaagtttagtggtatttaaaatcattcaaatttcgaa 44343497  T
Q  201 aaattatttaataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggat 290  Q
      ||| ||||||||||          |||||||||| ||||||||| ||||||||||| || |||||| ||||||| ||   |||||||||| || ||||    
T  44343496 ggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcacgaaaacatgagatttcttaggat 44343397  T
Q  291 tgttttt 297  Q
    |||||||    
T  44343396 tgttttt 44343390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 107 - 247
Target Start/End: Original strand, 31638887 - 31639028
Alignment:
Q  107 tctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaat-gtctcatggtattcaaaatcatttaaatttctaaaaatt 205  Q
    |||||||||||| |||||| || ||  |||||| ||||||||| || ||||||||||||  ||||  ||||||||||||||||| ||||||| ||  |||    
T  31638887 tctttgtcatttaaaaaaacttgtgtggtattctatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggatt 31638986  T
Q  206 atttaataaattggattttgtaggattttcttgtgaaatttt 247  Q
     ||||||||||  |||||||  ||||||||| || |||||||    
T  31638987 gtttaataaatcagattttgatggattttctagttaaatttt 31639028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 102 - 297
Target Start/End: Original strand, 47879175 - 47879381
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||| |||||||||||| ||||||||  ||  |||||||||||||||| || ||||||| ||||| ||||  || |||||||||||||| ||||||  ||    
T  47879175 aagattctttgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaaaatcattcaaatttaaaa 47879274  T
Q  201 aaattatttaataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggat 290  Q
      ||| ||||||||||          |||||||||| | ||||||| ||||||||||| || |||||| ||||||||||   |||||||||| ||  |||    
T  47879275 ggattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaagat 47879374  T
Q  291 tgttttt 297  Q
    |||||||    
T  47879375 tgttttt 47879381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 102 - 185
Target Start/End: Original strand, 41827314 - 41827398
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaat 185  Q
    |||||| ||||||||||||||||| | |||| || ||||||||||||||||||| |||| ||||| ||||  |||||||||||||    
T  41827314 aagactttttgtcattttaaaaaaatcttgaggtgttcaatcaagacttttcataacttaaaaaaagtcttgtggtattcaaaat 41827398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 135 - 297
Target Start/End: Complemental strand, 39219543 - 39219371
Alignment:
Q  135 tattcaatcaagacttttcatcacttaaaaat-gtctcatggtattcaaaatcatttaaatttctaaaaattatttaataaat----------tggattt 223  Q
    ||||||||||||||| || ||||||||||||  ||||  ||||||||||||||||| |||||| | |  ||| ||||||||||          |||||||    
T  39219543 tattcaatcaagactcttaatcacttaaaaaaagtctattggtattcaaaatcattcaaattt-tgatgattgtttaataaatcagattttgatggattt 39219445  T
Q  224 tgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggattgttttt 297  Q
    ||| ||||||||| ||||||||||| || |||||| |||||||| |   |||||||||| || |||||||||||    
T  39219444 tgtgggattttctagtgaaattttagcatgaaaaagtctttcataaaaacatgagatttcttaggattgttttt 39219371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 109 - 234
Target Start/End: Original strand, 34009026 - 34009153
Alignment:
Q  109 tttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaat-gtctca-tggtattcaaaatcatttaaatttctaaaaatta 206  Q
    |||||||||| |||||||| |||  |||||||||||| ||| || ||||||||||||  |||  | ||||||||||||||||| ||||||| ||  |||     
T  34009026 tttgtcatttaaaaaaagtcttgtggtattcaatcaacactcttaatcacttaaaaaaagtcctagtggtattcaaaatcattcaaatttcgaaggattg 34009125  T
Q  207 tttaataaattggattttgtaggatttt 234  Q
    ||||||||||  |||||||  |||||||    
T  34009126 tttaataaatcagattttgatggatttt 34009153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 101 - 225
Target Start/End: Complemental strand, 1470433 - 1470309
Alignment:
Q  101 taagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    ||||||| |||||||||| |||||||| |||   ||||||||  | ||||||||||| ||||||| || |  |||||||||||||| || ||||||  ||    
T  1470433 taagactatttgtcatttaaaaaaagtcttgtgatattcaatataaacttttcatcatttaaaaaagtattgtggtattcaaaatcgttcaaattttaaa 1470334  T
Q  201 aaattatttaataaattggattttg 225  Q
      ||| |||||| |||| |||||||    
T  1470333 gcattgtttaatgaattagattttg 1470309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 109 - 165
Target Start/End: Original strand, 10616955 - 10617011
Alignment:
Q  109 tttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaa 165  Q
    ||||||||||| ||||||| |||| |||||| ||||||| ||| |||||||||||||    
T  10616955 tttgtcatttttaaaaagtcttgaggtattcgatcaagattttccatcacttaaaaa 10617011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 109 - 297
Target Start/End: Complemental strand, 32143112 - 32142911
Alignment:
Q  109 tttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt---aaaaatgtctcatggtattcaaaatcatttaaatttctaaaaatt 205  Q
    |||||||||| |||||||| ||   ||||| |||||||||| || |||||||   ||||| ||| | ||||||||||||||||| ||||||  ||  |||    
T  32143112 tttgtcatttaaaaaaagtcttatggtattgaatcaagactcttaatcacttcaaaaaaaagtcacgtggtattcaaaatcattcaaattttgaaggatt 32143013  T
Q  206 atttaataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggattgttt 295  Q
     ||||||||||          |||||||||| ||||||||| ||||||||||| || |||||| |||| ||| |   |||||||||| ||  ||||||||    
T  32143012 gtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtcttccataaaaacatgagatttcttaagattgttt 32142913  T
Q  296 tt 297  Q
    ||    
T  32142912 tt 32142911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 149
Target Start/End: Complemental strand, 48117793 - 48117746
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagact 149  Q
    ||||||||||||||||||  |||||| |||| ||||||||||||||||    
T  48117793 aagactctttgtcatttttgaaaagtcttgaggtattcaatcaagact 48117746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 269
Target Start/End: Complemental strand, 37972941 - 37972889
Alignment:
Q  217 tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatga 269  Q
    |||||||||  ||||||| | ||| ||||||||||||||||| ||||||||||    
T  37972941 tggattttgcgggattttatagtgtaattttaacaagaaaaagtctttcatga 37972889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 297
Target Start/End: Original strand, 41827430 - 41827510
Alignment:
Q  217 tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggattgttttt 297  Q
    |||||||||| ||||| | | ||| ||||||||||||||||  ||||||||||    ||||||||| ||| ||||||||||    
T  41827430 tggattttgtgggattgtgtagtgtaattttaacaagaaaatgtctttcatgaaaatatgagatttcttgagattgttttt 41827510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 101; Significance: 5e-50; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 102 - 297
Target Start/End: Complemental strand, 4240652 - 4240456
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactta-aaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| |||| ||||  ||||||||||||||||| ||||||| ||    
T  4240652 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaa 4240553  T
Q  201 aaattatttaataaattggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggattgttttt 297  Q
      ||| |||||||||||||||||||  ||||||| | ||| ||||||||||||||||| ||||||||||    ||||||||| ||| ||||||||||    
T  4240552 ggattgtttaataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtctttcatgaatagatgagatttcttgagattgttttt 4240456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 102 - 297
Target Start/End: Original strand, 5949115 - 5949310
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaatgtctcatggtattcaaaatcatttaaatttctaaa 201  Q
    |||||||||||||||||||||||||| |||| |||||||||||| | |||||||||||||||||  |||  ||||||||||||||||| ||||||| ||     
T  5949115 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaaaatttttcatcacttaaaaaaatcttgtggtattcaaaatcattcaaatttcgaag 5949214  T
Q  202 aattatttaataaattggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggattgttttt 297  Q
     ||| |||||||||||||||||||  ||||||| | ||| ||||||||||||||||| ||||||||||    ||||||||| ||| ||||||||||    
T  5949215 gattgtttaataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 5949310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 102 - 297
Target Start/End: Complemental strand, 1461338 - 1461142
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaat-gtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||||||||||| ||||||||||||| |||| ||||||||||||||||||||||||||||||||  ||||   | |||||||||||||| ||||||| ||    
T  1461338 aagactctttgtaattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgcgctattcaaaatcattcaaatttcgaa 1461239  T
Q  201 aaattatttaataaattggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggattgttttt 297  Q
      ||| |||||||||||||||||||  ||||||| |  || ||||||||||||||||||||||||||||    ||||||||| ||| ||||||||||    
T  1461238 ggattgtttaataaattggattttgatggattttgtactgtaattttaacaagaaaaaatctttcatgaaaagatgagatttcttgagattgttttt 1461142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 102 - 297
Target Start/End: Complemental strand, 40013902 - 40013706
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaatg-tctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||||   |||  || |||||||||||||| ||||||| ||    
T  40013902 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaaatcttgtgttattcaaaatcattcaaatttcgaa 40013803  T
Q  201 aaattatttaataaattggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggattgttttt 297  Q
      ||| |||||| |||||||||||   ||||||| | ||| ||||||||||||||||| ||||||||||    ||||||||| ||| ||||||||||    
T  40013802 ggattgtttaatcaattggattttaatggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 40013706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 105 - 269
Target Start/End: Original strand, 22746306 - 22746473
Alignment:
Q  105 actctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaatttctaaaaa 203  Q
    ||||||||||||||||||||||| |||| |||||||||||| |||||||||||||| ||||| ||||  || |||||||||||||| ||||||| ||  |    
T  22746306 actctttgtcattttaaaaaagtcttgaggtattcaatcaaaacttttcatcacttaaaaaaagtcttgtgatattcaaaatcattcaaatttcgaatga 22746405  T
Q  204 ttatttaataaattggattttgtaggattttcttg--tgaaattttaacaagaaaaaatctttcatga 269  Q
    || |||||||||||| ||||||  ||||||| | |  || ||||||||||||||||| ||||||||||    
T  22746406 ttgtttaataaattgaattttgatggattttgtgggatgtaattttaacaagaaaaactctttcatga 22746473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 102 - 234
Target Start/End: Complemental strand, 1152303 - 1152170
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactta-aaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||||| |||||||| |||| ||||  ||||||||||||||||| ||||||| |     
T  1152303 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactttttatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgag 1152204  T
Q  201 aaattatttaataaattggattttgtaggatttt 234  Q
      ||| |||||||||||||||||||  |||||||    
T  1152203 ggattgtttaataaattggattttgatggatttt 1152170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 102 - 234
Target Start/End: Complemental strand, 4550457 - 4550324
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactta-aaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||||||||||||||||||| ||||  |||| |||||||||||||||||||||||||||| |||| ||||  ||||||||||||||||| ||||||| ||    
T  4550457 aagactctttgtcattttaacaaaggcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaa 4550358  T
Q  201 aaattatttaataaattggattttgtaggatttt 234  Q
      ||| |||||||||||||||||||  |||||||    
T  4550357 ggattgtttaataaattggattttgatggatttt 4550324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 102 - 234
Target Start/End: Complemental strand, 7947773 - 7947640
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaat-gtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||  ||||   | |||||||||||||| ||||||| ||    
T  7947773 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgcgatattcaaaatcattcaaatttcgaa 7947674  T
Q  201 aaattatttaataaattggattttgtaggatttt 234  Q
      ||| |||||||||||||||||||  |||||||    
T  7947673 ggattgtttaataaattggattttgatggatttt 7947640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 102 - 234
Target Start/End: Original strand, 13925937 - 13926070
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||||||||||||||||||||||||| |||| |||||||||||||| ||||||| |||| ||||| ||||  ||||||||||||||||| ||||||| ||    
T  13925937 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaa 13926036  T
Q  201 aaattatttaataaattggattttgtaggatttt 234  Q
      ||| |||||||||||||||||||  |||||||    
T  13926037 ggattgtttaataaattggattttgatggatttt 13926070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 102 - 298
Target Start/End: Complemental strand, 14000305 - 14000098
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||||||||||||||||| ||||||| |||| |||||||||||||||||||||||| || ||||| ||||  ||||||||||||||||| ||||||  ||    
T  14000305 aagactctttgtcatttttaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaattttgaa 14000206  T
Q  201 aaattatttaataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggat 290  Q
      ||| ||||||||||          |||||||||| ||||||| | ||| ||||||||||||||||| ||||||||||    ||||||||| ||| |||    
T  14000205 ggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagat 14000106  T
Q  291 tgttttta 298  Q
    ||||||||    
T  14000105 tgttttta 14000098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 102 - 228
Target Start/End: Original strand, 37013920 - 37014047
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||||||||||||||||| ||||||| |||| ||||||||||||||||||||||||||| ||||| ||||   |||||||||||||||| ||||||| ||    
T  37013920 aagactctttgtcatttttaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgcggtattcaaaatcattcaaatttcgaa 37014019  T
Q  201 aaattatttaataaattggattttgtag 228  Q
       || ||||||||||||||||||||||    
T  37014020 gggttgtttaataaattggattttgtag 37014047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 105 - 297
Target Start/End: Complemental strand, 9220904 - 9220711
Alignment:
Q  105 actctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaat-gtctcatggtattcaaaatcatttaaatttctaaaaa 203  Q
    ||||||||||||||  ||||||| |||   ||||||||||||||| || ||||||||||||  |||| ||| |||||||||||||| ||||||||||  |    
T  9220904 actctttgtcatttagaaaaagtcttgtgatattcaatcaagactctttatcacttaaaaaaagtcttatgatattcaaaatcattcaaatttctaagga 9220805  T
Q  204 ttatttaataaattggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggattgttttt 297  Q
    || |||||| |||| || ||||||||||||| | || ||||||||||| |||||| |||||| |||   ||||| |||| || |||||||||||    
T  9220804 ttgtttaatgaattagaatttgtaggattttatagtaaaattttaacacgaaaaagtctttcgtgaaaacatgatatttcttaggattgttttt 9220711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 102 - 297
Target Start/End: Original strand, 21147073 - 21147279
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||| |||||||||||| |||||||| |||  |||||||||||||||| || ||||||| ||||| ||||  ||||||||||||||||| ||||||| ||    
T  21147073 aagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaa 21147172  T
Q  201 aaattatttaataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggat 290  Q
      ||| ||||||||||          |||||||||| ||||||||| ||||||||||| || |||||| ||||||||||   |||||||||| || ||||    
T  21147173 ggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggat 21147272  T
Q  291 tgttttt 297  Q
    |||||||    
T  21147273 tgttttt 21147279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 102 - 225
Target Start/End: Complemental strand, 14465427 - 14465303
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    ||||||||||||||||| |||||||||||   |||||||||||||||| |||||| ||| ||||| ||||  ||||||||||||||||| ||||||| ||    
T  14465427 aagactctttgtcatttaaaaaaagttttctggtattcaatcaagactcttcatcgcttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaa 14465328  T
Q  201 aaattatttaataaattggattttg 225  Q
    | ||| |||||||||| ||||||||    
T  14465327 agattgtttaataaatcggattttg 14465303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 101 - 297
Target Start/End: Complemental strand, 27459150 - 27458944
Alignment:
Q  101 taagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    ||||| |||||||||||| |||||||| |||  |||||||||||||||| || |||||||||||| ||||  ||||||||||||||||| | ||||  ||    
T  27459150 taagattctttgtcatttaaaaaaagtcttgtagtattcaatcaagactcttaatcacttaaaaaagtctagtggtattcaaaatcattcagattttgaa 27459051  T
Q  201 aaattatttaataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggat 290  Q
      ||| ||||||||||          |||||||||| ||||||||| ||||||||||| || ||||||||| |||||||   ||||| |||| || ||||    
T  27459050 ggattgtttaataaattagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaaatcattcatgaaaacatgatatttcttaggat 27458951  T
Q  291 tgttttt 297  Q
    |||||||    
T  27458950 tgttttt 27458944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 109 - 297
Target Start/End: Complemental strand, 33656234 - 33656035
Alignment:
Q  109 tttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactta-aaaatgtctcatggtattcaaaatcatttaaatttctaaaaattat 207  Q
    |||||||||| |||||||| |||  |||||||||||||||| || |||||||| ||||  ||| |||||||||||||||||| ||||||| ||  ||| |    
T  33656234 tttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatctaatggtattcaaaatcattcaaatttcgaaggattgt 33656135  T
Q  208 ttaataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggattgttttt 297  Q
    |||||||||          |||||||||| ||||||||| ||||||||||| || |||||| ||||||||||    ||||||||| || |||||||||||    
T  33656134 ttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaatatgagatttcttaggattgttttt 33656035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 102 - 297
Target Start/End: Complemental strand, 7016939 - 7016733
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactta-aaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    ||||||||||   |||| |||||||| |||  |||||||||||||||| || |||||||| |||| ||||  ||||||||||||||||| ||||||| ||    
T  7016939 aagactcttttcaatttaaaaaaagtcttgtagtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaa 7016840  T
Q  201 aaattatttaataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggat 290  Q
      ||| ||||||||||          |||||||||| ||||||||| ||||||||||| || |||||| |||||||| |   |||||||||| || | ||    
T  7016839 ggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcataaaaacatgagatttcttagaat 7016740  T
Q  291 tgttttt 297  Q
    |||||||    
T  7016739 tgttttt 7016733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 102 - 215
Target Start/End: Original strand, 139279 - 139393
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||| |||||||||||| ||||||||  ||  ||||||||||||||||||| ||||||| ||||| ||||  ||||||||||||||||| ||||||| ||    
T  139279 aagattctttgtcatttaaaaaaagtcatgtggtattcaatcaagacttttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaa 139378  T
Q  201 aaattatttaataaa 215  Q
      ||| |||||||||    
T  139379 ggattgtttaataaa 139393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 123 - 297
Target Start/End: Original strand, 39852372 - 39852557
Alignment:
Q  123 aaagttttgatgtattcaatcaagacttttcatcacttaaaaat-gtctcatggtattcaaaatcatttaaatttctaaaaattatttaataaattggat 221  Q
    ||||| |||| ||||||||||||||||| |||||| |||||||  ||||  ||||||||||||||||| ||||||| ||  ||| |||| ||||||||||    
T  39852372 aaagtcttgaggtattcaatcaagacttctcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttactaaattggat 39852471  T
Q  222 tttg----------taggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggattgttttt 297  Q
    ||||          | ||||||| | ||| ||||||||||||||||| ||||||||||    ||||||||| ||| ||||||||||    
T  39852472 tttgatggattttatgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 39852557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 102 - 267
Target Start/End: Complemental strand, 5273119 - 5272943
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||| |||||||||||| |||||||| ||   |||||||||||||||| || |||| || ||||| ||||  ||||||||||||||||| ||||||| ||    
T  5273119 aagattctttgtcatttaaaaaaagtcttatggtattcaatcaagactcttaatcatttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaa 5273020  T
Q  201 aaattatttaataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcat 267  Q
      ||| ||||||||||          |||||||||| ||||||||| ||||||||||| || |||||| ||||||||    
T  5273019 tgattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcat 5272943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 121 - 269
Target Start/End: Original strand, 849172 - 849331
Alignment:
Q  121 aaaaagttttgatgtattcaatcaagacttttcatcacttaaaaat-gtctcatggtattcaaaatcatttaaatttctaaaaattatttaataaat--- 216  Q
    ||||||| |||  |||||||||||||||| || ||||||||||||  |||| |||||||||||||||||| ||||||| ||  ||| ||||||||||       
T  849172 aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctaatggtattcaaaatcattcaaatttcgaaggattgtttaataaatcag 849271  T
Q  217 -------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatga 269  Q
           | |||||||| ||||||||| ||||||||||| || |||||| ||||||||||    
T  849272 attttgatagattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatga 849331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 102 - 234
Target Start/End: Complemental strand, 32158098 - 32157964
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaat--gtctcatggtattcaaaatcatttaaatttcta 199  Q
    |||| |||||||||||| |||||||| |||  |||||||||||||||   | ||||||||||||   ||||  ||||||||||||||||| ||||||| |    
T  32158098 aagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacccctaatcacttaaaaaaaagtctagtggtattcaaaatcattcaaatttcga 32157999  T
Q  200 aaaattatttaataaattggattttgtaggatttt 234  Q
    |  ||| ||||||||||| |||||||  |||||||    
T  32157998 aggattgtttaataaattagattttgacggatttt 32157964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 102 - 234
Target Start/End: Original strand, 6460798 - 6460931
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaatg-tctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||| |||||||||||| ||||||||  ||  |||||||||||||||| || |||| |||||||   |||  ||||||||||||||||| ||||||| ||    
T  6460798 aagattctttgtcatttaaaaaaagtcatgtcgtattcaatcaagactcttaatcatttaaaaaaaatctagtggtattcaaaatcattcaaatttcgaa 6460897  T
Q  201 aaattatttaataaattggattttgtaggatttt 234  Q
       || ||||||||||  |||||||  |||||||    
T  6460898 ggtttgtttaataaatcagattttgatggatttt 6460931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 225
Target Start/End: Original strand, 9689696 - 9689787
Alignment:
Q  134 gtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaatttctaaaaattatttaataaattggattttg 225  Q
    |||||||||||||||| |||||||||| ||||| ||||  ||||||| ||||||| ||||||||| ||  ||| ||| ||||||| |||||||    
T  9689696 gtattcaatcaagactcttcatcacttaaaaaaagtcttgtggtatttaaaatca-ttaaatttcgaatgattgtttgataaattagattttg 9689787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 97; Significance: 1e-47; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 102 - 297
Target Start/End: Original strand, 13888 - 14084
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||| ||||  ||||||||||||||||| ||||||| ||    
T  13888 aagactctttgtcattttaaaaaagtattgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcaaa 13987  T
Q  201 aaattatttaataaattggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggattgttttt 297  Q
    | ||| |||||||||||||||||||  ||||||| | |||  ||||||| |||||||| ||||||||||    ||||||||| ||| ||||||||||    
T  13988 agattgtttaataaattggattttgatggattttgtagtgggattttaataagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 14084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 97; Significance: 1e-47; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 102 - 297
Target Start/End: Complemental strand, 21439 - 21243
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactta-aaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| |||| ||||  ||||||||||||||||| ||||||| ||    
T  21439 aagactctttgtcattttaaaaaagtattgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcaaa 21340  T
Q  201 aaattatttaataaattggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggattgttttt 297  Q
    | ||| |||||||||||||||||||  ||||||| | |||  ||||||| |||||||| ||||||||||    ||||||||| ||| ||||||||||    
T  21339 agattgtttaataaattggattttgatggattttgtagtgggattttaataagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 21243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 97; Significance: 1e-47; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 102 - 297
Target Start/End: Complemental strand, 28740486 - 28740290
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactta-aaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| |||| ||||  ||||||||||||||||| ||||||| ||    
T  28740486 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaa 28740387  T
Q  201 aaattatttaataaattggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggattgttttt 297  Q
      ||| |||||||||||||||||||  ||||||| | ||| ||||||||||||||||| |||||||| |    ||||||||| ||| ||||||||||    
T  28740386 ggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcataaaaagatgagatttcttgagattgttttt 28740290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 102 - 267
Target Start/End: Complemental strand, 10125495 - 10125327
Alignment:
Q  102 aagactctttgtcattttaaaaaagt--tttgatgtattcaatcaagacttttcatcacttaaaaat-gtctcatggtattcaaaatcatttaaatttct 198  Q
    ||||||||||||||||||||||||||  |||||  ||||||||||| |||||||||||||||||||  |||||||| |||||||||||||| |||||||     
T  10125495 aagactctttgtcattttaaaaaagtcttttgagatattcaatcaaaacttttcatcacttaaaaaaagtctcatgatattcaaaatcattcaaatttca 10125396  T
Q  199 aaaaattatttaataaattggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcat 267  Q
    ||  ||| |||||||||||| ||||||| ||||||| | ||||||||||||||||||||| ||||||||    
T  10125395 aaggattgtttaataaattgaattttgtgggattttttagtgaaattttaacaagaaaaagtctttcat 10125327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 102 - 265
Target Start/End: Original strand, 7026611 - 7026775
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||||||||||| || ||||| ||||  ||||||||||||||||| ||||||| ||    
T  7026611 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaa 7026710  T
Q  201 aaattatttaataaattggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttc 265  Q
      ||| |||||||||||||||||||  ||||||| | ||| ||||||||||||||||| ||||||    
T  7026711 ggattgtttaataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtctttc 7026775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 102 - 269
Target Start/End: Complemental strand, 13833625 - 13833457
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaat-gtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||||| ||| ||||||||||||||| ||||| |||||||||||||||||||||||||||||||  ||||  ||||||||||||||||| ||||||  ||    
T  13833625 aagactttttatcattttaaaaaagtcttgatatattcaatcaagacttttcatcacttaaaaaaagtcttctggtattcaaaatcattcaaattttgaa 13833526  T
Q  201 aaattatttaataaattggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatga 269  Q
      ||| |||||||||||||||||||| ||||||| | ||| ||||||||||||||||| ||||||||||    
T  13833525 ggattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatga 13833457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 105 - 297
Target Start/End: Original strand, 3463682 - 3463875
Alignment:
Q  105 actctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaatttctaaaaa 203  Q
    ||||||||||||||||||||||| |||| || ||||||||||||||||||||| || ||||| ||||  ||||||| ||||||||| || |||| ||  |    
T  3463682 actctttgtcattttaaaaaagtcttgaggtgttcaatcaagacttttcatcatttaaaaaaagtcttgtggtatttaaaatcattcaattttcaaagga 3463781  T
Q  204 ttatttaataaattggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggattgttttt 297  Q
    || |||||||||||||||||||  ||||||| | ||| ||||||||||||||||| ||||||||||    ||||||||| ||| ||||||||||    
T  3463782 ttgtttaataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaatatgagatttcttgagattgttttt 3463875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 102 - 234
Target Start/End: Original strand, 33135630 - 33135763
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||| ||||||| ||    
T  33135630 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtggtattcaaaatcattcaaatttcgaa 33135729  T
Q  201 aaattatttaataaattggattttgtaggatttt 234  Q
      ||| |||||||||||||||||||  |||||||    
T  33135730 ggattgtttaataaattggattttgatggatttt 33135763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 108 - 234
Target Start/End: Original strand, 10657419 - 10657546
Alignment:
Q  108 ctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaatttctaaaaatta 206  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| ||||  ||||||||||||||||| ||||||| ||  |||     
T  10657419 ctttgtcattttaaaaaagttttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaatgattg 10657518  T
Q  207 tttaataaattggattttgtaggatttt 234  Q
    |||||||||||||||||||  |||||||    
T  10657519 tttaataaattggattttgatggatttt 10657546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 102 - 228
Target Start/End: Complemental strand, 6224751 - 6224623
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt--aaaaatgtctcatggtattcaaaatcatttaaatttcta 199  Q
    |||||||||||||||||||||||||| |||| |||||||||||||| ||||||||||||  ||||| ||||  ||||||||||||| ||| ||||||| |    
T  6224751 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcactttaaaaaaagtcttgtggtattcaaaattattcaaatttcga 6224652  T
Q  200 aaaattatttaataaattggattttgtag 228  Q
    |  ||||||||||||||||||||||||||    
T  6224651 aggattatttaataaattggattttgtag 6224623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 102 - 234
Target Start/End: Original strand, 28844562 - 28844695
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||| ||||  ||||||||||||||||| ||||||| ||    
T  28844562 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaa 28844661  T
Q  201 aaattatttaataaattggattttgtaggatttt 234  Q
      ||| ||||||||||| |||||||  |||||||    
T  28844662 ggattgtttaataaattagattttgatggatttt 28844695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 102 - 225
Target Start/End: Original strand, 25288166 - 25288290
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaatg-tctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||||||||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||   |||  ||||||||||||||||| ||||||| ||    
T  25288166 aagactctttgtcattttaaaaaagtcttgaggtattcattcaagacttttcatcacttaaaaaaaatcttgtggtattcaaaatcattcaaatttcgaa 25288265  T
Q  201 aaattatttaataaattggattttg 225  Q
      ||| |||||||||||||||||||    
T  25288266 ggattgtttaataaattggattttg 25288290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 110 - 228
Target Start/End: Original strand, 3574862 - 3574981
Alignment:
Q  110 ttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaatttctaaaaattatt 208  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||| ||||  || |||||||||||||| ||||||| ||  ||| ||    
T  3574862 ttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtgatattcaaaatcattcaaatttcgaaggattgtt 3574961  T
Q  209 taataaattggattttgtag 228  Q
    ||||||||||||||||||||    
T  3574962 taataaattggattttgtag 3574981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 102 - 234
Target Start/End: Original strand, 18177274 - 18177407
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaat-gtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||||  || |  ||||||||||||||||| ||||||| ||    
T  18177274 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagttttgtggtattcaaaatcattcaaatttcgaa 18177373  T
Q  201 aaattatttaataaattggattttgtaggatttt 234  Q
      ||| |||||| ||||||||||||  |||||||    
T  18177374 ggattgtttaattaattggattttgatggatttt 18177407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 102 - 297
Target Start/End: Original strand, 20605243 - 20605449
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||| |||||||||||| |||||||| |||  |||||||||||||||| || ||||||| ||||| ||||  ||||||||||||||||| ||||||| ||    
T  20605243 aagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattaaaatttcgaa 20605342  T
Q  201 aaattatttaataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggat 290  Q
      ||| ||||||||||          |||||||||| ||||||||| ||||||||||| || |||||| ||||||||||   |||||||||| || ||||    
T  20605343 ggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggat 20605442  T
Q  291 tgttttt 297  Q
    |||||||    
T  20605443 tgttttt 20605449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 102 - 297
Target Start/End: Original strand, 24776362 - 24776568
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||| |||||||||||| |||||||| |||  |||||||||||||||| || ||||||| ||||| ||||  ||||||||||||||||| ||||||| ||    
T  24776362 aagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaa 24776461  T
Q  201 aaattatttaataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggat 290  Q
      ||| ||||||||||          |||||||||| ||||||||| ||||||||||| || |||||| ||||||||||   |||||||||| || ||||    
T  24776462 ggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggat 24776561  T
Q  291 tgttttt 297  Q
    |||||||    
T  24776562 tgttttt 24776568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 102 - 297
Target Start/End: Complemental strand, 31170827 - 31170621
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactta-aaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||| |||||||||||| |||||||| |||  |||||||||||||||| || |||||||| |||| ||||  ||||||||||||||||| ||||||| ||    
T  31170827 aagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttccaa 31170728  T
Q  201 aaattatttaataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggat 290  Q
      ||| ||||||||||          |||||||||| ||||||||| ||||||||||| || |||||| ||||||||||   |||||||||| || ||||    
T  31170727 ggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggat 31170628  T
Q  291 tgttttt 297  Q
    |||||||    
T  31170627 tgttttt 31170621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 120 - 297
Target Start/End: Original strand, 378962 - 379140
Alignment:
Q  120 aaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaat-gtctcatggtattcaaaatcatttaaatttctaaaaattatttaataaattg 218  Q
    |||||||| |||  |||||||||||| ||||||  ||| |||||||  || |||||||||||||||||||| ||||||  ||  ||| ||||||||||||    
T  378962 aaaaaagtcttgtggtattcaatcaaaactttttctcatttaaaaaaagtttcatggtattcaaaatcattcaaattttgaaggattgtttaataaattg 379061  T
Q  219 gattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggattgttttt 297  Q
    |||||||   |||||| | ||| |||||||||||||||||||| |||||||    ||||||||||||| ||||||||||    
T  379062 gattttgatagattttgtagtgtaattttaacaagaaaaaatcgttcatgaaaagatgagatttattgagattgttttt 379140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 102 - 234
Target Start/End: Original strand, 26788791 - 26788926
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcact---taaaaatgtctcatggtattcaaaatcatttaaatttct 198  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |    ||||| ||||  ||||||||||||||||| ||||||      
T  26788791 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcattcaaaaaaaaagtcttgtggtattcaaaatcattcaaattttg 26788890  T
Q  199 aaaaattatttaataaattggattttgtaggatttt 234  Q
    ||  ||| |||||||||||||||||||  |||||||    
T  26788891 aaggattgtttaataaattggattttgatggatttt 26788926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 102 - 297
Target Start/End: Original strand, 16269698 - 16269904
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||| |||||||||||| |||||||| |||  |||||||||||||||| || ||||||| ||||| ||||  ||||||||||||||||| ||||||| ||    
T  16269698 aagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaa 16269797  T
Q  201 aaattatttaataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggat 290  Q
      ||| ||||||||||          |||||||||| ||||||| | ||||||||||| || |||||| ||||||||||   |||||||||| || ||||    
T  16269798 ggattgtttaataaatcagattttgatggattttgtgggattttatagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggat 16269897  T
Q  291 tgttttt 297  Q
    |||||||    
T  16269898 tgttttt 16269904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 107 - 297
Target Start/End: Complemental strand, 14198775 - 14198574
Alignment:
Q  107 tctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaat-gtctcatggtattcaaaatcatttaaatttctaaaaatt 205  Q
    |||||||||||| |||||||| |||  |||||||||||||||| || ||||||||||||  |||   ||||||||||||||||| ||||||| ||  |||    
T  14198775 tctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtccagtggtattcaaaatcattcaaatttcgaaggatt 14198676  T
Q  206 atttaataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggattgttt 295  Q
     ||||||||||          |||||||||| ||||||||| ||||||||||| || |||||| ||||||||||   |||||||||| || |||||||||    
T  14198675 gtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaattctttcatgaaaacatgagatttcttaggattgttt 14198576  T
Q  296 tt 297  Q
    ||    
T  14198575 tt 14198574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 102 - 251
Target Start/End: Complemental strand, 26601403 - 26601253
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactta-aaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    ||||||||||||||||  |||||||| |||  |||||||||||||||| || |||||||| |||| ||| | ||||||||||||||||| ||||||| ||    
T  26601403 aagactctttgtcattaaaaaaaagtcttgtagtattcaatcaagactcttaatcacttaaaaaaagtcacgtggtattcaaaatcattcaaatttcgaa 26601304  T
Q  201 aaattatttaataaattggattttgtaggattttcttgtgaaattttaaca 251  Q
       || ||||||||||  |||||||| ||||||||| |||||| |||||||    
T  26601303 tgtttgtttaataaatcagattttgtgggattttctagtgaaactttaaca 26601253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 102 - 189
Target Start/End: Complemental strand, 215428 - 215340
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactta-aaaatgtctcatggtattcaaaatcatt 189  Q
    |||||||||||||| ||| ||||||| |||| |||||||||||||||||||||||||||| |||| ||||| |||||||||||||||||    
T  215428 aagactctttgtcaattttaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtggtattcaaaatcatt 215340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 102 - 297
Target Start/End: Original strand, 12407387 - 12407593
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||| |||||||||||| |||||||| |||  |||||||||| ||||| || ||||||| ||||| ||||  ||||||||||||||||| ||||||  ||    
T  12407387 aagattctttgtcatttaaaaaaagtcttgtggtattcaatcgagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaattttgaa 12407486  T
Q  201 aaattatttaataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggat 290  Q
      ||| ||||||||||          |||||||||| ||||||||| ||||||||||| || |||||| ||||||||||   |||||||||| ||  |||    
T  12407487 ggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttaccatgaaaaagtctttcatgaaaacatgagatttcttaagat 12407586  T
Q  291 tgttttt 297  Q
    |||||||    
T  12407587 tgttttt 12407593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 102 - 297
Target Start/End: Complemental strand, 22551966 - 22551760
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactta-aaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||| |||||||||||| |||||||| |||  ||||||||||||||||||| |||||||| |||| ||||  ||||||||||||| ||| ||||||| ||    
T  22551966 aagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacttttaatcacttaaaaaaagtctagtggtattcaaaattattcaaatttcgaa 22551867  T
Q  201 aaattatttaataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggat 290  Q
      ||| |||| |||||          |||||||||| ||||||||| ||||||||||| || |||||| | ||||||||   |||||||||| ||  |||    
T  22551866 tgattgtttattaaattaaattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtatttcatgaaaacatgagatttcttatgat 22551767  T
Q  291 tgttttt 297  Q
    |||||||    
T  22551766 tgttttt 22551760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 102 - 297
Target Start/End: Original strand, 43847653 - 43847859
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||| |||||||||||| |||||||| |||  |||||||||||||||| || ||||||| ||||| ||||  | ||||||||||||||| ||||||| ||    
T  43847653 aagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagttgtattcaaaatcattcaaatttcgaa 43847752  T
Q  201 aaattatttaataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggat 290  Q
      ||| ||||||||||          |||||||||| | ||||||| ||||||||||| || |||||| ||| ||||||   |||||||||| || ||||    
T  43847753 ggattgtttaataaatcagaatttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctgtcatgaaaacatgagatttcttaggat 43847852  T
Q  291 tgttttt 297  Q
    |||||||    
T  43847853 tgttttt 43847859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 102 - 234
Target Start/End: Original strand, 44765782 - 44765915
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||| |||||||||||| |||||||| |||  |||||||||| ||||| || ||||||| ||||| ||||  ||||||||||||||||| ||||||| ||    
T  44765782 aagattctttgtcatttaaaaaaagtcttgtggtattcaatcgagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaa 44765881  T
Q  201 aaattatttaataaattggattttgtaggatttt 234  Q
    | ||| ||||||||||  |||||||  |||||||    
T  44765882 agattgtttaataaataagattttgatggatttt 44765915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 102 - 269
Target Start/End: Original strand, 35317069 - 35317247
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||| |||||||||||| |||||||| |||   ||||||||||||||| || ||||||| ||||| ||||  ||||||||||||||||| ||||||| ||    
T  35317069 aagattctttgtcatttaaaaaaagtcttgtaatattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaa 35317168  T
Q  201 aaattatttaataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatga 269  Q
      ||| ||||||||||          |||||||||| | ||||||| ||||||||||| || |||||| ||||||||||    
T  35317169 ggattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatga 35317247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 109 - 295
Target Start/End: Complemental strand, 305661 - 305464
Alignment:
Q  109 tttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactta-aaaatgtctcatggtattcaaaatcatttaaatttctaaaaattat 207  Q
    |||||||||| |||||||| |||  |||||||||||||||| || |||||||| |||| ||||  ||||||||||||||||| ||||||  ||  ||| |    
T  305661 tttgtcatttgaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaattttgaatgattgt 305562  T
Q  208 ttaataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggattgttt 295  Q
    |||||||||          ||||||||||  |||||||| |||||||||||  | |||||| ||||||||||   |||||||||| || |||||||||    
T  305561 ttaataaatcagatttcgatggattttgtgagattttctagtgaaattttagaatgaaaaagtctttcatgaaaacatgagatttcttaggattgttt 305464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 102 - 297
Target Start/End: Complemental strand, 5093250 - 5093044
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactta-aaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||| |||||||||||| |||||||| |||  |||||||||||||||  || |||||||| |||| ||||  | ||||||||||||||| ||||||  ||    
T  5093250 aagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacgcttaatcacttaaaaaaagtctagtagtattcaaaatcattcaaattttgaa 5093151  T
Q  201 aaattatttaataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggat 290  Q
      ||| ||||||||||          |||||||||| |||||||||  |||||||||| || |||||| |||||||| |   |||||||||| || ||||    
T  5093150 ggattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcataaaaacatgagatttcttaggat 5093051  T
Q  291 tgttttt 297  Q
    |||||||    
T  5093050 tgttttt 5093044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 102 - 234
Target Start/End: Original strand, 1789449 - 1789582
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatg-tattcaatcaagacttttcatcacttaaaaat-gtctcatggtattcaaaatcatttaaatttcta 199  Q
    |||| |||||||||||| |||||||| || ||| ||||||||||| ||| || ||||||||||||  ||||  ||||||||||||||||| ||||||| |    
T  1789449 aagattctttgtcatttaaaaaaagtctt-atgatattcaatcaaaactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcga 1789547  T
Q  200 aaaattatttaataaattggattttgtaggatttt 234  Q
    |  ||| ||||||||||  |||||||  |||||||    
T  1789548 aggattgtttaataaatcagattttgatggatttt 1789582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 217 - 297
Target Start/End: Original strand, 9120259 - 9120339
Alignment:
Q  217 tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggattgttttt 297  Q
    |||||||||| ||||||||| |||||||||||  | | |||||||||||||||   |||||||||| || |||||||||||    
T  9120259 tggattttgtgggattttctagtgaaattttagtatggaaaaatctttcatgaaaacatgagatttcttaggattgttttt 9120339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 223
Target Start/End: Complemental strand, 21370752 - 21370631
Alignment:
Q  103 agactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaat-gtctcatggtattcaaaatcatttaaatttctaaa 201  Q
    ||||||||| | |||| |||||||||| |   ||||||||||| |  |||||||||| |||||  ||||  ||||||||||||||||| ||||||  ||     
T  21370752 agactctttcttatttaaaaaaagtttagtgatattcaatcaaaaaatttcatcactcaaaaaaagtcttgtggtattcaaaatcattcaaattttgaag 21370653  T
Q  202 aattatttaataaattggattt 223  Q
     ||| ||| |||||||||||||    
T  21370652 tattgtttgataaattggattt 21370631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 105 - 165
Target Start/End: Original strand, 19145036 - 19145095
Alignment:
Q  105 actctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaa 165  Q
    ||||||| |||||| |||||||  |||  ||||||||||||||| ||||||||||||||||    
T  19145036 actctttatcatttaaaaaaagacttgtggtattcaatcaagac-tttcatcacttaaaaa 19145095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 82; Significance: 1e-38; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 102 - 297
Target Start/End: Complemental strand, 30385257 - 30385063
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactta-aaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||||||||||||||||||||||||| |||| |||||||||||| | ||||||||||||| |||| ||||  ||||||||||||||||| ||||||| ||    
T  30385257 aagactctttgtcattttaaaaaagtattgaggtattcaatcaaaaattttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaa 30385158  T
Q  201 aaattatttaataaattggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggattgttttt 297  Q
      ||| |||||||||||||||||||| ||||||| | ||| ||||||||||  | ||| ||||||||||    ||||||||| ||| ||||||||||    
T  30385157 ggattgtttaataaattggattttgtgggattttgtagtgtaattttaaca--acaaagtctttcatgaaaagatgagatttcttgagattgttttt 30385063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 102 - 298
Target Start/End: Original strand, 31895701 - 31895908
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||||||||||| || ||||| ||||  ||||||||||||||||| ||||||| ||    
T  31895701 aagactctttgtcattttaaaaaagtcttgaagtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaa 31895800  T
Q  201 aaattatttaataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggat 290  Q
      ||| ||||||||||          |||||||||| ||||||||| ||| ||||||||||||||||| ||||||||||    ||||||||| ||| |||    
T  31895801 ggattgtttaataaattggattttgatggattttgtgggattttctagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagat 31895900  T
Q  291 tgttttta 298  Q
    ||||||||    
T  31895901 tgttttta 31895908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 102 - 269
Target Start/End: Complemental strand, 34759251 - 34759072
Alignment:
Q  102 aagactctttgtcattttaaaaaa-gttttgatgtattcaatcaagacttttcatcactta-aaaatgtctcatggtattcaaaatcatttaaatttcta 199  Q
    |||||||||||||||||||||||| || |||| |||||||||||||||||||||||||||| |||| ||||  ||||||||||||||||| ||||||| |    
T  34759251 aagactctttgtcattttaaaaaaagtcttgaagtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcca 34759152  T
Q  200 aaaattatttaataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatga 269  Q
    |  ||| ||||||||||          |||||||||| ||||||| | ||| ||||||||||||||||||||||||||||    
T  34759151 aggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatctttcatga 34759072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 102 - 234
Target Start/End: Complemental strand, 14262633 - 14262500
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||||||||||||||||| ||||||| |||| |||||||||||||| ||||||||| || ||||| ||||  ||||||||||||||||||||||||| ||    
T  14262633 aagactctttgtcatttttaaaaagtcttgaggtattcaatcaagatttttcatcatttaaaaaaagtcttgtggtattcaaaatcatttaaatttcgaa 14262534  T
Q  201 aaattatttaataaattggattttgtaggatttt 234  Q
      ||| |||||||||||||||||||  |||||||    
T  14262533 ggattgtttaataaattggattttgatggatttt 14262500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 102 - 234
Target Start/End: Original strand, 34773414 - 34773547
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaatg-tctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||||   |||  ||||||||||||||||| ||||||| ||    
T  34773414 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaaatcttgtggtattcaaaatcattcaaatttcgaa 34773513  T
Q  201 aaattatttaataaattggattttgtaggatttt 234  Q
      ||| |||||||||||||||||||  |||||||    
T  34773514 ggattgtttaataaattggattttgatggatttt 34773547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 102 - 297
Target Start/End: Complemental strand, 6197678 - 6197472
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactta-aaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||| |||||||||||| |||||||| |||  |||||||||||||||| || |||||||| |||| ||||  ||||||||||||||||| ||||||| ||    
T  6197678 aagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaa 6197579  T
Q  201 aaattatttaataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggat 290  Q
      ||| ||||||||||          |||||||||| ||||||||| ||||||||||| || |||||| ||||||||||   |||||||||| || ||||    
T  6197578 ggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggat 6197479  T
Q  291 tgttttt 297  Q
    |||||||    
T  6197478 tgttttt 6197472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 173 - 298
Target Start/End: Original strand, 31067570 - 31067695
Alignment:
Q  173 tggtattcaaaatcatttaaatttctaaaaattatttaataaattggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgt 272  Q
    ||||||||||||||||| ||||||| ||  ||| |||||||||||||||||||| ||||||| | ||| ||||||||||||||||| |||||||| |       
T  31067570 tggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcataaaaa 31067669  T
Q  273 catgagatttattgggattgttttta 298  Q
     ||||||||| ||| |||||||||||    
T  31067670 gatgagatttcttgagattgttttta 31067695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 102 - 297
Target Start/End: Complemental strand, 2300938 - 2300732
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactta-aaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||| |||||||||||| |||||||| |||  |||||||||||||||| || |||||||| |||| ||||  ||||||| ||||||||| ||||||| ||    
T  2300938 aagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttgatcacttaaaaaaagtctactggtattgaaaatcattcaaatttcgaa 2300839  T
Q  201 aaattatttaataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggat 290  Q
      ||| ||||||||||          |||||||||| ||||||||| ||||||||||| || |||||| ||||||||||   |||||||||| || ||||    
T  2300838 ggattgtttaataaataagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggat 2300739  T
Q  291 tgttttt 297  Q
    | |||||    
T  2300738 ttttttt 2300732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 102 - 234
Target Start/End: Original strand, 7051850 - 7051983
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaat-gtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||| |||||||||||| |||||||| |||  |||| ||||||||||| |||||||||||||||  |||   || |||||||||||||| ||||||| ||    
T  7051850 aagattctttgtcatttaaaaaaagtcttgtggtatacaatcaagactcttcatcacttaaaaaaagtcgtgtgatattcaaaatcattcaaatttcgaa 7051949  T
Q  201 aaattatttaataaattggattttgtaggatttt 234  Q
      ||| |||||||||||||||||||  |||||||    
T  7051950 ggattgtttaataaattggattttgatggatttt 7051983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 102 - 297
Target Start/End: Original strand, 29076603 - 29076810
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaat--gtctcatggtattcaaaatcatttaaatttcta 199  Q
    |||| |||||||||||| |||||||| |||  |||||||||| ||| | || ||||||||||||   ||||  | ||||||||||||||| ||||||| |    
T  29076603 aagattctttgtcatttaaaaaaagtcttgtggtattcaatctagattcttaatcacttaaaaaaaagtctagtagtattcaaaatcattcaaatttcga 29076702  T
Q  200 aaaattatttaataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattggga 289  Q
    |  ||| ||||||||||          |||||||| ||||||||||| ||||||||||| || ||||||||||||||| |   |||||||||| || |||    
T  29076703 aggattgtttaataaatcagattttgatggattttataggattttctagtgaaattttagcatgaaaaaatctttcataaaaacatgagattttttagga 29076802  T
Q  290 ttgttttt 297  Q
    ||||||||    
T  29076803 ttgttttt 29076810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 120 - 234
Target Start/End: Original strand, 7497099 - 7497214
Alignment:
Q  120 aaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaatttctaaaaattatttaataaattg 218  Q
    |||||||| |||  |||||||||||||| |||||||||||| ||||| ||||  ||||||||||||||||| ||||||| ||  | | ||||||||||||    
T  7497099 aaaaaagtcttgtggtattcaatcaagatttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggagtgtttaataaattg 7497198  T
Q  219 gattttgtaggatttt 234  Q
    |||||||  |||||||    
T  7497199 gattttgatggatttt 7497214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 102 - 297
Target Start/End: Original strand, 29111576 - 29111784
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaat---gtctcatggtattcaaaatcatttaaatttct 198  Q
    |||| |||||||||||| |||||||| |||  |||||||||| ||| | || ||||||||||||    ||||  | ||||||||||||||| |||||||     
T  29111576 aagattctttgtcatttaaaaaaagtcttgtggtattcaatctagattcttaatcacttaaaaaaaaagtctagtagtattcaaaatcattcaaatttcg 29111675  T
Q  199 aaaaattatttaataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattggg 288  Q
    ||  ||| ||||||||||          |||||||| ||||||||||| ||||||||||| || ||||||||||||||| |   |||||||||| || ||    
T  29111676 aaggattgtttaataaatcagattttgatggattttataggattttctagtgaaattttagcatgaaaaaatctttcataaaaacatgagattttttagg 29111775  T
Q  289 attgttttt 297  Q
    |||||||||    
T  29111776 attgttttt 29111784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 110 - 297
Target Start/End: Original strand, 1391637 - 1391835
Alignment:
Q  110 ttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaatttctaaaaattatt 208  Q
    ||||||||| || ||||| |||  |||||||||||||||| || ||||||| ||||| ||||  ||||||||||||||||| ||||||  ||  ||| ||    
T  1391637 ttgtcatttaaataaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttggaaggattgtt 1391736  T
Q  209 taataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggattgttttt 297  Q
    ||||||||          |||||||||| ||||||||| ||||||||||  || |||||| ||||||||||   |||||||||  || |||||||||||    
T  1391737 taataaatcagattttgatggattttgtgggattttctagtgaaattttggcatgaaaaagtctttcatgaaaacatgagattccttaggattgttttt 1391835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 207 - 298
Target Start/End: Complemental strand, 4200521 - 4200430
Alignment:
Q  207 tttaataaattggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggattgttttta 298  Q
    |||||||||||||||||||  ||||||| | ||| ||||||||||||||||| ||||||||||    ||||||||| ||| |||||||||||    
T  4200521 tttaataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttta 4200430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 109 - 226
Target Start/End: Original strand, 3848224 - 3848340
Alignment:
Q  109 tttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaat-gtctcatggtattcaaaatcatttaaatttctaaaaattat 207  Q
    |||||||||| ||| |||| |||  ||| |||||||||||||  |||||||||||||  || |  ||||||||||||||||||||||||  ||  ||| |    
T  3848224 tttgtcatttaaaacaagtattgtggtaatcaatcaagactt--catcacttaaaaaaagttttgtggtattcaaaatcatttaaattttgaatgattgt 3848321  T
Q  208 ttaataaattggattttgt 226  Q
    ||||||||||| |||||||    
T  3848322 ttaataaattgaattttgt 3848340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 234
Target Start/End: Original strand, 28002677 - 28002803
Alignment:
Q  109 tttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaatttctaaaaattat 207  Q
    |||||||||| |||||||| ||   |||||||||||||||| || ||||||| ||||| ||||  || |||||||||||||| ||||||  ||  ||| |    
T  28002677 tttgtcatttaaaaaaagtcttctggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaaaatcattcaaatttggaaggattgt 28002776  T
Q  208 ttaataaattggattttgtaggatttt 234  Q
    |||||||||  |||||||  |||||||    
T  28002777 ttaataaatcagattttgatggatttt 28002803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 114 - 196
Target Start/End: Original strand, 656982 - 657065
Alignment:
Q  114 cattttaaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaattt 196  Q
    ||||| |||||||| |||  |||||||||||||||| || ||||||| ||||| ||||  |||||||| |||||||| ||||||    
T  656982 catttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattctaaatcattcaaattt 657065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 104
Target Start/End: Original strand, 22628483 - 22628525
Alignment:
Q  62 tgttgaaagccacattcaacacctccattgcacttggtctaag 104  Q
    ||||||||| | |||||||||| ||||||||||||||||||||    
T  22628483 tgttgaaagtctcattcaacacttccattgcacttggtctaag 22628525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1504 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold1504
Description:

Target: scaffold1504; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 102 - 297
Target Start/End: Original strand, 869 - 1075
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt--aaaaatgtctcatggtattcaaaatcatttaaatttcta 199  Q
    |||||||||||||||||||||||| |  ||| |||||||||||||||||||||||||||  ||||| ||||  ||||||||||||||||| ||||||| |    
T  869 aagactctttgtcattttaaaaaaatcatgaggtattcaatcaagacttttcatcacttaaaaaaaagtcttgtggtattcaaaatcattcaaatttcga 968  T
Q  200 aaaattatttaataaat---------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggat 290  Q
    | |||||||||||||||         |||||||||| ||||||| | ||| ||||||||| ||||||| |||||||| |    ||||||||| ||| |||    
T  969 agaattatttaataaatagattttgatggattttgtgggattttgtagtgtaattttaactagaaaaagtctttcattaaaatatgagatttcttgagat 1068  T
Q  291 tgttttt 297  Q
    |||||||    
T  1069 tgttttt 1075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 102 - 234
Target Start/End: Complemental strand, 39818 - 39685
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactta-aaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||||||||||||||||| ||||||| ||||  ||||||||||||| ||||||||||||| ||||||||   ||||||||||||||||| ||| ||| ||    
T  39818 aagactctttgtcatttttaaaaagtcttgaactattcaatcaagatttttcatcacttaaaaaatgtcatgtggtattcaaaatcattcaaacttcgaa 39719  T
Q  201 aaattatttaataaattggattttgtaggatttt 234  Q
      |||||||||||||||||||||||  |||||||    
T  39718 ggattatttaataaattggattttgatggatttt 39685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0922 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0922
Description:

Target: scaffold0922; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 102 - 225
Target Start/End: Original strand, 4206 - 4330
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||||||||||| ||||||||||||| |||| |||||||||||||||||||||||| || ||||| ||||  ||||||||||||||||| ||||||  ||    
T  4206 aagactctttgtaattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaattttgaa 4305  T
Q  201 aaattatttaataaattggattttg 225  Q
      ||| |||||||||||||||||||    
T  4306 ggattgtttaataaattggattttg 4330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543 (Bit Score: 64; Significance: 6e-28; HSPs: 1)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 102 - 297
Target Start/End: Original strand, 10566 - 10772
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaatg-tctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||| |||||| |||||||   |||  ||||||||||||||||| ||||||| ||    
T  10566 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttctcatcatttaaaaaaaatcttgtggtattcaaaatcattcaaatttcaaa 10665  T
Q  201 aaattatttaataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggat 290  Q
      ||| ||||||||||          |||||||| | ||||||| | ||| ||||||||||||||||| ||||||||||    ||||||||| ||| |||    
T  10666 ggattgtttaataaattgaattttgatggattttatgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagat 10765  T
Q  291 tgttttt 297  Q
    |||||||    
T  10766 tgttttt 10772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 102 - 297
Target Start/End: Complemental strand, 15234 - 15028
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactta-aaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||| |||||||||||| |||||||| |||  |||||||||||||||| || |||||||| |||| ||||  ||||||||||||||||| ||||||| ||    
T  15234 aagattctttgtcatttaaaaaaagtcttgtagtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaa 15135  T
Q  201 aaattatttaataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggat 290  Q
      ||| ||||||||||          |||||||||| ||||||||| ||||||||||| || |||||| ||||||||||   ||||| |||| || ||||    
T  15134 ggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaaatttcttaggat 15035  T
Q  291 tgttttt 297  Q
    |||||||    
T  15034 tgttttt 15028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 102 - 297
Target Start/End: Complemental strand, 15877 - 15671
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactta-aaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||| |||||||||||| |||||||| |||  |||||||||||||||| || |||||||| |||| ||||  ||||||||||||||||| ||||||| ||    
T  15877 aagattctttgtcatttaaaaaaagtcttgtagtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaa 15778  T
Q  201 aaattatttaataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggat 290  Q
      ||| ||||||||||          |||||||||| ||||||||| ||||||||||| || |||||| ||||||||||   ||||| |||| || ||||    
T  15777 ggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaaatttcttaggat 15678  T
Q  291 tgttttt 297  Q
    |||||||    
T  15677 tgttttt 15671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 102 - 297
Target Start/End: Original strand, 100217 - 100423
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcactt-aaaaatgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||| |||||||||||| |||||||| |||  ||| |||||||||||| || ||||||| ||||| ||||  ||||||||||||||||| ||||||| ||    
T  100217 aagattctttgtcatttaaaaaaagtcttgtggtactcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcaaa 100316  T
Q  201 aaattatttaataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggat 290  Q
      ||| ||||||||||          |||||||||| || |||||| ||||||||||||||||||||| ||||||||||   |||||||||| || |||     
T  100317 ggattgtttaataaatcaaattttgatggattttgtgggtttttctagtgaaattttaacaagaaaaagtctttcatgaaaacatgagatttcttaggac 100416  T
Q  291 tgttttt 297  Q
    |||||||    
T  100417 tgttttt 100423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 121 - 297
Target Start/End: Complemental strand, 38786 - 38600
Alignment:
Q  121 aaaaagttttgatgtattcaatcaagacttttcatcacttaaaaat-gtctcatggtattcaaaatcatttaaatttctaaaaattatttaataa----a 215  Q
    ||||||| |||  |||||||||||||||| || ||||||||||||  ||||  ||||||||||||||||| ||||||| ||  ||| ||||||||    |    
T  38786 aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataatcaga 38687  T
Q  216 tt-----ggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggattgttttt 297  Q
    ||     ||||||||| ||||||||| ||||||||||| || |||||| ||||||||||   |||||||||| || |||||||||||    
T  38686 ttttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgttttt 38600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 102 - 267
Target Start/End: Original strand, 102099 - 102277
Alignment:
Q  102 aagactctttgtcattttaaaaaag--ttttgatgtattcaatcaagacttttcatcacttaaaaat-gtctcatggtattcaaaatcatttaaatttct 198  Q
    |||| |||||||||||| |||||||  | |||  |||||||||||||||| || ||||||||||||  ||||  ||||||||||||||||| |||||||     
T  102099 aagattctttgtcatttaaaaaaagagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcg 102198  T
Q  199 aaaaattatttaataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcat 267  Q
    ||| ||| ||||||||||          |||||||||| ||||||||| ||||||||||| || |||||| ||||||||    
T  102199 aaagattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcat 102277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 269
Target Start/End: Original strand, 14876 - 14944
Alignment:
Q  201 aaattatttaataaattggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatga 269  Q
    ||||| |||||||||||||||||||| ||||||| | ||| ||||||||||||||||| ||||||||||    
T  14876 aaattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatga 14944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 102 - 297
Target Start/End: Complemental strand, 39096 - 38890
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaa-atgtctcatggtattcaaaatcatttaaatttctaa 200  Q
    |||| ||||| |||||| |||||||| |||  ||||||||| |||||| || ||||||||||| | ||||  || |||||||||||||| ||||||  ||    
T  39096 aagattctttatcatttaaaaaaagtcttgtggtattcaataaagactcttaatcacttaaaagaagtctagtgatattcaaaatcattcaaatttggaa 38997  T
Q  201 aaattatttaataaat----------tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatgatgtcatgagatttattgggat 290  Q
      ||| ||||||||||          |||||||||| ||||||||| ||||||||||  || |||||| ||||||||||   |||||||||  || ||||    
T  38996 ggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttggcatgaaaaagtctttcatgaaaacatgagattccttaggat 38897  T
Q  291 tgttttt 297  Q
    |||||||    
T  38896 tgttttt 38890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 3)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 102 - 165
Target Start/End: Original strand, 233743 - 233806
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaa 165  Q
    |||||||||||||||||||||||||| || | || ||||||||| |||||||| ||||||||||    
T  233743 aagactctttgtcattttaaaaaagtcttaaggtcttcaatcaaaacttttcaacacttaaaaa 233806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 102 - 165
Target Start/End: Original strand, 234591 - 234654
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaa 165  Q
    |||||||||||||||||||||||||| || | || ||||||||| |||||||| ||||||||||    
T  234591 aagactctttgtcattttaaaaaagtcttaaggtcttcaatcaaaacttttcaacacttaaaaa 234654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 105 - 165
Target Start/End: Original strand, 222578 - 222638
Alignment:
Q  105 actctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaa 165  Q
    ||||||||||||||||||||||| || | || ||||||||| |||||||| ||||||||||    
T  222578 actctttgtcattttaaaaaagtcttaaggtcttcaatcaaaacttttcaacacttaaaaa 222638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 118 - 234
Target Start/End: Complemental strand, 58262 - 58144
Alignment:
Q  118 ttaaaaaagttttgatgtattcaatcaagactttt-catcacttaaaaatgtctca-tggtattcaaaatcatttaaatttctaaaaattatttaataaa 215  Q
    |||||||||| |||  ||||||| ||||||||||| |||||||||||||    ||  ||||||||||||||||| ||||||| ||  ||| |||||||||    
T  58262 ttaaaaaagtcttgtggtattcagtcaagactttttcatcacttaaaaaaagttctgtggtattcaaaatcattcaaatttcgaatgattgtttaataaa 58163  T
Q  216 ttggattttgtaggatttt 234  Q
    ||||||||||  |||||||    
T  58162 ttggattttgatggatttt 58144  T

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Target: scaffold0054 (Bit Score: 33; Significance: 0.000000002; HSPs: 3)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 269
Target Start/End: Complemental strand, 36982 - 36930
Alignment:
Q  217 tggattttgtaggattttcttgtgaaattttaacaagaaaaaatctttcatga 269  Q
    |||||||||| ||||||| | ||| ||||||||||||||||| ||||||||||    
T  36982 tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatga 36930  T

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Target: scaffold0054; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 37035 - 36975
Alignment:
Q  174 ggtattcaaaatcatttaaatttctaaaaattatttaataaattggattttgtaggatttt 234  Q
    |||||||||||||||| ||||||| ||  ||| |||||||||||||||||||  |||||||    
T  37035 ggtattcaaaatcattaaaatttcgaagcattgtttaataaattggattttgatggatttt 36975  T

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Target: scaffold0054; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 141
Target Start/End: Complemental strand, 37066 - 37027
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaa 141  Q
    |||||||||||||||||||||||||| |||| ||||||||    
T  37066 aagactctttgtcattttaaaaaagtcttgaggtattcaa 37027  T

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Target: scaffold0276 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 196
Target Start/End: Complemental strand, 740 - 645
Alignment:
Q  102 aagactctttgtcattttaaaaaagttttgatgtattcaatcaagacttttcatcacttaaaaatgtctca-tggtattcaaaatcatttaaattt 196  Q
    |||| |||||||||||| |||||||| |||  |||||||||||| ||| || ||||||||||  | | | | ||||||||||||||||| ||||||    
T  740 aagattctttgtcatttaaaaaaagtattgtggtattcaatcaaaactcttaatcacttaaattttttttagtggtattcaaaatcattcaaattt 645  T

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