View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4934_low_18 (Length: 314)

Name: NF4934_low_18
Description: NF4934
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4934_low_18
NF4934_low_18
[»] chr2 (29 HSPs)
chr2 (152-288)||(37793742-37793876)
chr2 (19-84)||(3887866-3887931)
chr2 (19-84)||(5574152-5574217)
chr2 (19-84)||(30902315-30902380)
chr2 (19-84)||(34248448-34248513)
chr2 (19-78)||(3714246-3714305)
chr2 (27-84)||(43426669-43426726)
chr2 (19-84)||(22373652-22373717)
chr2 (19-84)||(38594377-38594442)
chr2 (19-84)||(38597973-38598038)
chr2 (34-84)||(38618146-38618196)
chr2 (27-84)||(1981026-1981082)
chr2 (19-84)||(20504276-20504341)
chr2 (19-84)||(26003477-26003542)
chr2 (19-56)||(27331829-27331866)
chr2 (27-84)||(38181802-38181859)
chr2 (19-84)||(43732171-43732236)
chr2 (19-87)||(38465828-38465896)
chr2 (27-84)||(4898207-4898264)
chr2 (27-84)||(4945601-4945658)
chr2 (19-84)||(6566948-6567013)
chr2 (19-52)||(9071238-9071271)
chr2 (19-76)||(11153238-11153295)
chr2 (19-84)||(11726528-11726593)
chr2 (27-84)||(14952806-14952863)
chr2 (27-76)||(32143456-32143505)
chr2 (27-76)||(33555218-33555267)
chr2 (19-55)||(28680910-28680946)
chr2 (19-83)||(37195085-37195149)
[»] chr3 (30 HSPs)
chr3 (19-86)||(21403936-21404003)
chr3 (19-84)||(41349702-41349767)
chr3 (19-84)||(50260966-50261031)
chr3 (19-84)||(52931674-52931739)
chr3 (19-84)||(29512173-29512238)
chr3 (19-84)||(51617373-51617438)
chr3 (19-84)||(52315423-52315488)
chr3 (27-84)||(22099821-22099878)
chr3 (19-84)||(42449138-42449203)
chr3 (27-78)||(29565157-29565208)
chr3 (19-78)||(38455198-38455257)
chr3 (19-84)||(10872714-10872779)
chr3 (27-84)||(17552519-17552576)
chr3 (27-84)||(22173837-22173894)
chr3 (27-84)||(36362645-36362702)
chr3 (19-84)||(51239276-51239341)
chr3 (19-78)||(52168331-52168390)
chr3 (27-76)||(3020664-3020713)
chr3 (19-84)||(12744934-12744999)
chr3 (19-84)||(26121572-26121637)
chr3 (19-84)||(26244413-26244478)
chr3 (27-84)||(29720118-29720175)
chr3 (19-56)||(4980343-4980380)
chr3 (19-84)||(22496993-22497058)
chr3 (19-56)||(29720219-29720256)
chr3 (27-84)||(40065363-40065420)
chr3 (27-84)||(54680531-54680588)
chr3 (19-87)||(14756441-14756509)
chr3 (19-84)||(35237711-35237778)
chr3 (21-61)||(53683848-53683888)
[»] chr7 (23 HSPs)
chr7 (19-84)||(38238817-38238882)
chr7 (19-78)||(4406450-4406509)
chr7 (19-84)||(22106700-22106765)
chr7 (19-84)||(40529586-40529651)
chr7 (19-84)||(1706875-1706940)
chr7 (19-84)||(25079240-25079305)
chr7 (19-84)||(27554530-27554595)
chr7 (19-84)||(34703485-34703550)
chr7 (19-84)||(40416948-40417013)
chr7 (21-76)||(21387611-21387666)
chr7 (19-78)||(29498816-29498875)
chr7 (19-84)||(716276-716341)
chr7 (19-84)||(24936575-24936640)
chr7 (27-84)||(45000643-45000700)
chr7 (28-84)||(9555302-9555358)
chr7 (27-84)||(22281485-22281542)
chr7 (19-84)||(30138830-30138895)
chr7 (19-84)||(4027251-4027316)
chr7 (19-76)||(7295089-7295146)
chr7 (19-84)||(11602810-11602874)
chr7 (19-84)||(23797390-23797455)
chr7 (19-84)||(34275233-34275298)
chr7 (19-51)||(20353152-20353184)
[»] chr5 (32 HSPs)
chr5 (19-84)||(11262361-11262426)
chr5 (19-84)||(19531343-19531408)
chr5 (19-84)||(23914874-23914939)
chr5 (19-84)||(42013855-42013920)
chr5 (19-78)||(3851396-3851455)
chr5 (19-84)||(8961252-8961317)
chr5 (19-84)||(13311207-13311272)
chr5 (27-84)||(15712163-15712220)
chr5 (19-84)||(26300144-26300209)
chr5 (19-84)||(37944635-37944700)
chr5 (19-78)||(35969177-35969236)
chr5 (28-85)||(21945421-21945478)
chr5 (19-84)||(13157366-13157431)
chr5 (19-84)||(37870050-37870115)
chr5 (34-78)||(43446907-43446951)
chr5 (27-78)||(38835573-38835624)
chr5 (27-84)||(35172472-35172529)
chr5 (19-78)||(14416439-14416498)
chr5 (19-84)||(1100099-1100164)
chr5 (19-84)||(5259427-5259492)
chr5 (19-84)||(9004980-9005045)
chr5 (19-84)||(11795769-11795834)
chr5 (27-84)||(15965997-15966054)
chr5 (27-84)||(21152630-21152687)
chr5 (27-84)||(21159765-21159822)
chr5 (27-84)||(21163572-21163629)
chr5 (19-76)||(27895930-27895986)
chr5 (19-76)||(30778033-30778090)
chr5 (19-84)||(36137048-36137113)
chr5 (19-84)||(37685012-37685077)
chr5 (19-51)||(20362010-20362042)
chr5 (28-84)||(37637311-37637367)
[»] chr1 (29 HSPs)
chr1 (19-84)||(639832-639897)
chr1 (19-84)||(2349798-2349863)
chr1 (19-84)||(27206792-27206857)
chr1 (19-84)||(33604033-33604098)
chr1 (19-84)||(48022628-48022693)
chr1 (19-84)||(8257985-8258050)
chr1 (19-84)||(37734815-37734880)
chr1 (19-84)||(3384265-3384330)
chr1 (19-84)||(6065503-6065568)
chr1 (19-84)||(31008292-31008357)
chr1 (27-84)||(40262510-40262567)
chr1 (28-84)||(35367520-35367576)
chr1 (27-78)||(34658434-34658485)
chr1 (19-84)||(4602686-4602751)
chr1 (27-84)||(5856399-5856456)
chr1 (28-77)||(14418099-14418148)
chr1 (27-84)||(15439904-15439961)
chr1 (19-84)||(2352937-2353002)
chr1 (19-84)||(34953938-34954003)
chr1 (19-80)||(8465959-8466020)
chr1 (19-84)||(14967267-14967332)
chr1 (27-84)||(15278607-15278664)
chr1 (27-84)||(31909790-31909847)
chr1 (19-84)||(38824333-38824398)
chr1 (27-84)||(38847343-38847400)
chr1 (27-84)||(39216145-39216202)
chr1 (19-84)||(41007719-41007784)
chr1 (19-84)||(45925277-45925342)
chr1 (27-84)||(52253580-52253637)
[»] chr8 (18 HSPs)
chr8 (19-84)||(7377587-7377652)
chr8 (19-84)||(9056063-9056128)
chr8 (19-84)||(14381271-14381336)
chr8 (19-84)||(40098802-40098867)
chr8 (19-78)||(26014602-26014661)
chr8 (19-84)||(13211272-13211337)
chr8 (19-84)||(13228912-13228977)
chr8 (27-78)||(15285701-15285752)
chr8 (27-78)||(15466070-15466121)
chr8 (27-84)||(29451769-29451826)
chr8 (19-84)||(37716107-37716172)
chr8 (32-84)||(11692093-11692145)
chr8 (19-69)||(33574845-33574894)
chr8 (27-84)||(10934644-10934701)
chr8 (27-84)||(34326287-34326344)
chr8 (27-76)||(35874506-35874555)
chr8 (19-84)||(40640320-40640385)
chr8 (27-87)||(36314897-36314957)
[»] chr6 (11 HSPs)
chr6 (19-84)||(21506505-21506570)
chr6 (19-84)||(17773534-17773599)
chr6 (19-84)||(30397758-30397822)
chr6 (27-84)||(17268054-17268111)
chr6 (19-84)||(21998072-21998137)
chr6 (19-76)||(30460663-30460720)
chr6 (19-87)||(12349854-12349922)
chr6 (19-84)||(6047998-6048063)
chr6 (19-84)||(6560699-6560764)
chr6 (19-84)||(8145991-8146056)
chr6 (27-84)||(10731515-10731572)
[»] chr4 (23 HSPs)
chr4 (19-84)||(5418557-5418622)
chr4 (19-84)||(13689578-13689643)
chr4 (19-84)||(52817609-52817674)
chr4 (19-84)||(24941144-24941209)
chr4 (19-76)||(40881477-40881534)
chr4 (19-69)||(5281192-5281242)
chr4 (28-78)||(10031563-10031613)
chr4 (27-84)||(4406283-4406340)
chr4 (19-76)||(36786183-36786240)
chr4 (19-84)||(56328492-56328557)
chr4 (19-83)||(4484107-4484171)
chr4 (19-85)||(21586959-21587025)
chr4 (19-84)||(8826907-8826972)
chr4 (19-84)||(9011787-9011852)
chr4 (19-84)||(18423925-18423990)
chr4 (27-84)||(20542845-20542902)
chr4 (27-76)||(24448706-24448755)
chr4 (19-84)||(31808364-31808429)
chr4 (27-84)||(34321424-34321481)
chr4 (19-52)||(40952572-40952605)
chr4 (27-84)||(42013187-42013244)
chr4 (27-84)||(51126146-51126203)
chr4 (18-78)||(6243673-6243733)
[»] scaffold0047 (1 HSPs)
scaffold0047 (19-84)||(61205-61269)
[»] scaffold0007 (1 HSPs)
scaffold0007 (19-84)||(246828-246893)
[»] scaffold0039 (1 HSPs)
scaffold0039 (19-84)||(54430-54495)
[»] scaffold0024 (1 HSPs)
scaffold0024 (19-84)||(120178-120243)
[»] scaffold0536 (1 HSPs)
scaffold0536 (34-76)||(3998-4040)
[»] scaffold0121 (1 HSPs)
scaffold0121 (27-84)||(17475-17532)
[»] scaffold0009 (1 HSPs)
scaffold0009 (19-84)||(146010-146075)


Alignment Details
Target: chr2 (Bit Score: 122; Significance: 1e-62; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 152 - 288
Target Start/End: Complemental strand, 37793876 - 37793742
Alignment:
Q  152 gaagaatcgtcgtaaagcattaaatgtaaaataaagcaggaatattcttcttattactattaactattttgagagatagagagagatggtaaacaaaaaa 251  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  37793876 gaagaatcgtcataaagcattaaatgtaaaataaagcaggaatattcttcttatta--attaactattttgagagatagagagagatggtaaacaaaaaa 37793779  T
Q  252 tatagaagcgagaaagaaatgctattttatttcaaat 288  Q
    |||||||||||||||||||||||||||||||||||||    
T  37793778 tatagaagcgagaaagaaatgctattttatttcaaat 37793742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 3887866 - 3887931
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||| ||||||||||||||| |||||||||||||| ||||||||||||||||||||| |||||    
T  3887866 tttagatacattcaattaatgatttatgtagtctttattatatgtcacatacatcattaattgaat 3887931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 5574217 - 5574152
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||| ||||||||||||||||||||| |||||||| |||||||||||| |||||||| |||||    
T  5574217 tttagatacattcaattaatgatgtatgtggtctttattatatgtcacatatatcattaattgaat 5574152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 30902380 - 30902315
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||| ||||||||||||||| ||||| |||||||| ||||||||||||||||||||| |||||    
T  30902380 tttagatacattcaattaatgatatatgtggtctttattatatgtcacatacatcattaattgaat 30902315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 34248448 - 34248513
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||| ||||||||||||||||||||| |||||||| |||||||| |||||||||||| |||||    
T  34248448 tttagatacattcaattaatgatgtatgttgtctttattatatgtcagatacatcattaattgaat 34248513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 3714246 - 3714305
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaa 78  Q
    ||||||| |||||||||||| ||||||||||||||||| |||| ||||||||||||||||    
T  3714246 tttagatacattcaattaattatgtatgtagtctttattatatatcacatacatcattaa 3714305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 27 - 84
Target Start/End: Original strand, 43426669 - 43426726
Alignment:
Q  27 cattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||||||||||||||||| |||||||| |||||||||||| |||||||| |||||    
T  43426669 cattcaattaatgatgtatgtggtctttattatatgtcacatatatcattaattgaat 43426726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 22373717 - 22373652
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||| |||||| |||||||||||||| |||||||| |||||| | |||||||||||| |||||    
T  22373717 tttagatacattcagttaatgatgtatgtggtctttattatatgttatatacatcattaattgaat 22373652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 38594377 - 38594442
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||| ||||||| ||||||| ||||| ||| |||| ||||||||||||||||||||| |||||    
T  38594377 tttagatacattcaactaatgatatatgtggtccttattatatgtcacatacatcattaattgaat 38594442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 38597973 - 38598038
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||| ||||||| ||||||| ||||| ||| |||| ||||||||||||||||||||| |||||    
T  38597973 tttagatacattcaactaatgatatatgtggtccttattatatgtcacatacatcattaattgaat 38598038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 84
Target Start/End: Original strand, 38618146 - 38618196
Alignment:
Q  34 ttaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    |||||||||||||| |||||||| |||| |||||||||||||||| |||||    
T  38618146 ttaatgatgtatgtggtctttattatatatcacatacatcattaattgaat 38618196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 84
Target Start/End: Original strand, 1981026 - 1981082
Alignment:
Q  27 cattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||||||||||| ||||| | |||||| ||||||||||||||||||||| |||||    
T  1981026 cattcaattaatgatttatgtgg-ctttattatatgtcacatacatcattaattgaat 1981082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 20504276 - 20504341
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    |||||||  |||||||||||||||||| || ||||||| |||||| | |||||||||||| |||||    
T  20504276 tttagatatattcaattaatgatgtatataatctttattatatgttatatacatcattaattgaat 20504341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 26003542 - 26003477
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||| ||||||||||||||||||| | |||||||| ||||   |||||||||||| |||||||    
T  26003542 tttagattcattcaattaatgatgtatatggtctttattatatactacatacatcatttaatgaat 26003477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 56
Target Start/End: Complemental strand, 27331866 - 27331829
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttat 56  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  27331866 tttagattcattcaattaatgatgtatgtagtctttat 27331829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 84
Target Start/End: Complemental strand, 38181859 - 38181802
Alignment:
Q  27 cattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||||||||||||||| ||||||||||  ||  |||||||||||||| |||||||    
T  38181859 cattcaattaatgatgtatatagtctttattgtagatcacatacatcatttaatgaat 38181802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 43732171 - 43732236
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||| |||||||||||||||| || | ||| |||||||||  ||||||||||||| |||||||    
T  43732171 tttagattcattcaattaatgatgaatatggtcattatcatataccacatacatcatttaatgaat 43732236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 87
Target Start/End: Complemental strand, 38465896 - 38465828
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaattaa 87  Q
    ||||||| ||||||||||||||||||| | |||||||| ||    ||||||||||||| ||||||||||    
T  38465896 tttagattcattcaattaatgatgtatatggtctttattatggaccacatacatcatttaatgaattaa 38465828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 84
Target Start/End: Complemental strand, 4898264 - 4898207
Alignment:
Q  27 cattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||||||||||||||||| |||  ||| |||  |||||||||||||||| |||||    
T  4898264 cattcaattaatgatgtatgtggtccatattataaatcacatacatcattaattgaat 4898207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 84
Target Start/End: Complemental strand, 4945658 - 4945601
Alignment:
Q  27 cattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||||||||||||||||| |||  ||| |||  |||||||||||||||| |||||    
T  4945658 cattcaattaatgatgtatgtggtccatattataaatcacatacatcattaattgaat 4945601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 6566948 - 6567013
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    |||||||  ||| ||||||| |||||| |||| ||||| ||||||| ||||||||||||| |||||    
T  6566948 tttagatatatttaattaataatgtatatagtttttattatatgtcgcatacatcattaattgaat 6567013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 52
Target Start/End: Original strand, 9071238 - 9071271
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtct 52  Q
    ||||||| ||||||||||||||||||||||||||    
T  9071238 tttagattcattcaattaatgatgtatgtagtct 9071271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 11153238 - 11153295
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcatt 76  Q
    ||||||| ||||||||||||||||||||| | |||||| |||   |||||||||||||    
T  11153238 tttagattcattcaattaatgatgtatgtgggctttattatagaccacatacatcatt 11153295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 11726528 - 11726593
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||| |||||||| |||||||||| || ||||||| ||   |||||||||||||| |||||||    
T  11726528 tttagattcattcaatcaatgatgtatataatctttattatggatcacatacatcatttaatgaat 11726593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 84
Target Start/End: Original strand, 14952806 - 14952863
Alignment:
Q  27 cattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    |||||||| ||||||| ||||||||| ||| |||  |||||||||||||| |||||||    
T  14952806 cattcaataaatgatgcatgtagtctatataatagatcacatacatcatttaatgaat 14952863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 76
Target Start/End: Complemental strand, 32143505 - 32143456
Alignment:
Q  27 cattcaattaatgatgtatgtagtctttatcatatgtcacatacatcatt 76  Q
    |||||||||||||| |||| ||||||||||||||   |||||||||||||    
T  32143505 cattcaattaatgaagtatatagtctttatcataaaccacatacatcatt 32143456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 76
Target Start/End: Original strand, 33555218 - 33555267
Alignment:
Q  27 cattcaattaatgatgtatgtagtctttatcatatgtcacatacatcatt 76  Q
    ||||||||||||||||||| |  |||||||||||  ||||||||||||||    
T  33555218 cattcaattaatgatgtatatgctctttatcatagatcacatacatcatt 33555267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 55
Target Start/End: Complemental strand, 28680946 - 28680910
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtcttta 55  Q
    ||||||| ||||||||||||||||||||| |||||||    
T  28680946 tttagattcattcaattaatgatgtatgtggtcttta 28680910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 83
Target Start/End: Original strand, 37195085 - 37195149
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaa 83  Q
    ||||||| || |||||||||||||||| | |||||||| |||   ||||||||||||| ||||||    
T  37195085 tttagattcactcaattaatgatgtatatggtctttattatagaccacatacatcatttaatgaa 37195149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 52; Significance: 8e-21; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 21404003 - 21403936
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaatta 86  Q
    ||||||| ||||||||||||||||||||| |||||||| ||||||||||||||||||||| |||||||    
T  21404003 tttagatacattcaattaatgatgtatgtggtctttattatatgtcacatacatcattaattgaatta 21403936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 41349767 - 41349702
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||| ||||||||||||||||||||| |||||||| ||||||||||||||||||||| |||||    
T  41349767 tttagatacattcaattaatgatgtatgtggtctttattatatgtcacatacatcattaattgaat 41349702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 50260966 - 50261031
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||| ||||||||||||||||||||| |||||||| |||||||||||||||| ||||||||||    
T  50260966 tttagatacattcaattaatgatgtatgtggtctttattatatgtcacatacatccttaaatgaat 50261031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 52931674 - 52931739
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||| ||||||||||||||||||||| |||||||| ||||||||||||||||||||| |||||    
T  52931674 tttagatacattcaattaatgatgtatgtggtctttattatatgtcacatacatcattaattgaat 52931739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 29512238 - 29512173
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||| |||| |||||||||||||||| |||||||| ||||||||||||||||||||| |||||    
T  29512238 tttagatacatttaattaatgatgtatgtggtctttattatatgtcacatacatcattaattgaat 29512173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 51617438 - 51617373
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||| ||||||||||||| ||||||| |||||||| ||||||||||||||||||||| |||||    
T  51617438 tttagatacattcaattaatgttgtatgtggtctttattatatgtcacatacatcattaattgaat 51617373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 52315423 - 52315488
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    |||||||  |||||||||||||||||||| |||||||| ||||||||||||||||||||| |||||    
T  52315423 tttagatatattcaattaatgatgtatgtggtctttattatatgtcacatacatcattaattgaat 52315488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 27 - 84
Target Start/End: Complemental strand, 22099878 - 22099821
Alignment:
Q  27 cattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||| ||||| |||||    
T  22099878 cattcaattaatgatgtatgtagtttttattatatgtcacatacattattaattgaat 22099821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 42449138 - 42449203
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||| |||||||||||||||||||||  ||||||| ||||||||||| ||||||||| |||||    
T  42449138 tttagatacattcaattaatgatgtatgtgatctttattatatgtcacattcatcattaattgaat 42449203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 78
Target Start/End: Complemental strand, 29565208 - 29565157
Alignment:
Q  27 cattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaa 78  Q
    ||||||||||||||| ||||| |||||||| |||||||||||||||||||||    
T  29565208 cattcaattaatgatatatgtggtctttattatatgtcacatacatcattaa 29565157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 38455198 - 38455257
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaa 78  Q
    ||||||| |||| | |||||||||||||| |||||||| |||||||||||||||||||||    
T  38455198 tttagatacattaatttaatgatgtatgtggtctttattatatgtcacatacatcattaa 38455257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 10872779 - 10872714
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||| ||||||||||||||||||| | |||||||| |||  |||||||||||||| |||||||    
T  10872779 tttagattcattcaattaatgatgtatatggtctttattataaatcacatacatcatttaatgaat 10872714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 84
Target Start/End: Complemental strand, 17552576 - 17552519
Alignment:
Q  27 cattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||||||| ||||||||| |||||||| ||||||||||||||| ||||| |||||    
T  17552576 cattcaattaacgatgtatgtggtctttattatatgtcacatacattattaattgaat 17552519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 84
Target Start/End: Complemental strand, 22173894 - 22173837
Alignment:
Q  27 cattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    |||||||||||| | ||||||||| ||||| ||||||||||||||||||||| |||||    
T  22173894 cattcaattaataaagtatgtagtttttattatatgtcacatacatcattaattgaat 22173837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 84
Target Start/End: Original strand, 36362645 - 36362702
Alignment:
Q  27 cattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    |||| |||||||||||||||| ||| |||| ||||||||||||||||||||| |||||    
T  36362645 catttaattaatgatgtatgtggtccttattatatgtcacatacatcattaattgaat 36362702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 51239276 - 51239341
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||| ||||||| ||||||| ||||| ||| |||| ||||||||||||||||||||| |||||    
T  51239276 tttagatacattcaactaatgatatatgtggtccttattatatgtcacatacatcattaattgaat 51239341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 52168390 - 52168331
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaa 78  Q
    ||||||| |||| | |||||||||||||| |||||||| ||||| |||||||||||||||    
T  52168390 tttagatacattaatttaatgatgtatgtggtctttattatatgccacatacatcattaa 52168331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 76
Target Start/End: Complemental strand, 3020713 - 3020664
Alignment:
Q  27 cattcaattaatgatgtatgtagtctttatcatatgtcacatacatcatt 76  Q
    ||||||||||||||||||| |||||||||| |||| ||| ||||||||||    
T  3020713 cattcaattaatgatgtatatagtctttattatatatcatatacatcatt 3020664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 12744934 - 12744999
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||| ||||||||||||||||||| | |||||||| |||   ||||||||||||| |||||||    
T  12744934 tttagattcattcaattaatgatgtatatggtctttattatagaccacatacatcatttaatgaat 12744999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 26121572 - 26121637
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||| ||||||||||||||||||| | |||||||| |||   ||||||||||||| |||||||    
T  26121572 tttagattcattcaattaatgatgtatatggtctttattatagaccacatacatcatttaatgaat 26121637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 26244413 - 26244478
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||| ||||||||||||||||||| | |||||||| |||   ||||||||||||| |||||||    
T  26244413 tttagattcattcaattaatgatgtatatggtctttattatagaccacatacatcatttaatgaat 26244478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 84
Target Start/End: Complemental strand, 29720175 - 29720118
Alignment:
Q  27 cattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    |||| |||||||||||||||| |||||||| |||||||||||| |||| ||| |||||    
T  29720175 catttaattaatgatgtatgtggtctttattatatgtcacatatatcaataattgaat 29720118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 56
Target Start/End: Complemental strand, 4980380 - 4980343
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttat 56  Q
    ||||||| |||||||| |||||||||||||||||||||    
T  4980380 tttagattcattcaataaatgatgtatgtagtctttat 4980343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 22497058 - 22496993
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||| |||||||||||| | |||| | ||||||||||||   ||||||||||||| |||||||    
T  22497058 tttagattcattcaattaataacgtatattgtctttatcatagaccacatacatcatttaatgaat 22496993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 56
Target Start/End: Complemental strand, 29720256 - 29720219
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttat 56  Q
    ||||||||||||||||||||||| ||||| ||||||||    
T  29720256 tttagatgcattcaattaatgatatatgtggtctttat 29720219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 84
Target Start/End: Complemental strand, 40065420 - 40065363
Alignment:
Q  27 cattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||||||||||||||| | |||||||| ||||   |||||||||||| |||||||    
T  40065420 cattcaattaatgatgtatatggtctttattatatactacatacatcattcaatgaat 40065363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 84
Target Start/End: Complemental strand, 54680588 - 54680531
Alignment:
Q  27 cattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    |||||||||||||||||||||||||  ||| ||   |||||||||||||||| |||||    
T  54680588 cattcaattaatgatgtatgtagtccatattatgaatcacatacatcattaattgaat 54680531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 87
Target Start/End: Original strand, 14756441 - 14756509
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaattaa 87  Q
    |||||||  ||||| |||||||||||| | |||||||| |||   ||||||||||||||||| ||||||    
T  14756441 tttagatttattcatttaatgatgtatatggtctttattatagaccacatacatcattaaataaattaa 14756509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 35237711 - 35237778
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatat--gtcacatacatcattaaatgaat 84  Q
    ||||||| |||| |||||||||||||| | |||||||| ||||   |||||||||||||| |||||||    
T  35237711 tttagatccatttaattaatgatgtatatggtctttattatatagatcacatacatcatttaatgaat 35237778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 61
Target Start/End: Complemental strand, 53683888 - 53683848
Alignment:
Q  21 tagatgcattcaattaatgatgtatgtagtctttatcatat 61  Q
    ||||| ||||||||||||||||||||| |||||||| ||||    
T  53683888 tagattcattcaattaatgatgtatgtggtctttattatat 53683848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 1e-19; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 38238817 - 38238882
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||| ||||||||||||||||||||| |||||||| ||||||||||||||||||||| |||||    
T  38238817 tttagatacattcaattaatgatgtatgtggtctttattatatgtcacatacatcattaattgaat 38238882  T

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Target: chr7; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 4406450 - 4406509
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaa 78  Q
    ||||||| ||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  4406450 tttagatacattcaattaatgatgtatgttgtctttattatatgtcacatacatcattaa 4406509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 22106700 - 22106765
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    |||||||  |||||||||||||||||||| |||||||| ||||||||||||||||||||| |||||    
T  22106700 tttagatatattcaattaatgatgtatgtggtctttattatatgtcacatacatcattaattgaat 22106765  T

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Target: chr7; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 40529651 - 40529586
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    |||||||  |||||||||||||||||||| |||||||| ||||||||||||||||||||| |||||    
T  40529651 tttagatatattcaattaatgatgtatgtggtctttattatatgtcacatacatcattaattgaat 40529586  T

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Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 1706940 - 1706875
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||| |||||| |||||||||||| | |||||||| ||||||||||||||||||||| |||||    
T  1706940 tttagatacattcatttaatgatgtatatggtctttattatatgtcacatacatcattaattgaat 1706875  T

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Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 25079240 - 25079305
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||| |||||||||||||||||||||  || |||| ||||||||||||||||||||| |||||    
T  25079240 tttagatacattcaattaatgatgtatgtgatccttattatatgtcacatacatcattaattgaat 25079305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 27554530 - 27554595
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||| |||||||||||||||||||||  ||||||| |||| |||||||||||||||| |||||    
T  27554530 tttagatacattcaattaatgatgtatgtgatctttattatatatcacatacatcattaattgaat 27554595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 34703550 - 34703485
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||| ||||||||||||||||||| | |||||||| ||||||||||| ||||||||| |||||    
T  34703550 tttagatacattcaattaatgatgtatatggtctttattatatgtcacatgcatcattaattgaat 34703485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 40417013 - 40416948
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||| ||||||||||||||||||| | |||||||| ||||||||||| ||||||||| |||||    
T  40417013 tttagatacattcaattaatgatgtatatggtctttattatatgtcacatgcatcattaattgaat 40416948  T

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Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 21 - 76
Target Start/End: Original strand, 21387611 - 21387666
Alignment:
Q  21 tagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcatt 76  Q
    ||||| |||||||||||||||||||||||||||||| ||||  |||||||||||||    
T  21387611 tagattcattcaattaatgatgtatgtagtctttattatataccacatacatcatt 21387666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 29498816 - 29498875
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaa 78  Q
    |||||||  |||||||||||||||||||| |||||||| ||||||||||||||| |||||    
T  29498816 tttagatatattcaattaatgatgtatgtggtctttattatatgtcacatacataattaa 29498875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 716341 - 716276
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||| |||||||||||||||||||||  |||||||  ||||||| |||||||||||| |||||    
T  716341 tttagatacattcaattaatgatgtatgtgatctttattctatgtcatatacatcattaattgaat 716276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 24936640 - 24936575
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    |||||||  |||||||||||||||||||| |||||||| |||||||||| |||| ||||| |||||    
T  24936640 tttagatatattcaattaatgatgtatgtggtctttattatatgtcacagacataattaattgaat 24936575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 84
Target Start/End: Complemental strand, 45000700 - 45000643
Alignment:
Q  27 cattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||||| ||||||||||| |||||||| |||||||||| |||||||||| |||||    
T  45000700 cattcaattgatgatgtatgtggtctttattatatgtcacacacatcattaattgaat 45000643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 28 - 84
Target Start/End: Original strand, 9555302 - 9555358
Alignment:
Q  28 attcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    |||||||||||||||||| ||||||||||||||   ||||||||||||| |||||||    
T  9555302 attcaattaatgatgtatatagtctttatcataaaccacatacatcatttaatgaat 9555358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 84
Target Start/End: Complemental strand, 22281542 - 22281485
Alignment:
Q  27 cattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    |||| ||||||||||| ||||| ||||||| |||||||| |||||||||||| |||||    
T  22281542 cattgaattaatgatgaatgtactctttattatatgtcatatacatcattaattgaat 22281485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 30138895 - 30138830
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||| ||||||||||||||||||| |||||||||| |||   |||| |||||||| |||||||    
T  30138895 tttagattcattcaattaatgatgtatatagtctttattatagaccacacacatcatttaatgaat 30138830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 4027251 - 4027316
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||| |||||| |||||||||||||| |||| ||| ||   ||| ||||||||||||||||||    
T  4027251 tttagattcattcatttaatgatgtatgttgtctatattatgaatcatatacatcattaaatgaat 4027316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 7295089 - 7295146
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcatt 76  Q
    ||||||| || |||||||||| ||| ||| |||||||| |||| ||||||||||||||    
T  7295089 tttagattcactcaattaatgttgtttgtggtctttattatatatcacatacatcatt 7295146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 11602874 - 11602810
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||| |||||||| ||||||||||||||||| ||| |||  |||||||||| ||| |||||||    
T  11602874 tttagattcattcaataaatgatgtatgtagtctatat-atagttcacatacataatttaatgaat 11602810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 23797455 - 23797390
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||| ||||||||||||||||||| | |||||||| |||    |||||||||||| |||||||    
T  23797455 tttagattcattcaattaatgatgtatctggtctttattatagactacatacatcatttaatgaat 23797390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 34275298 - 34275233
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||| |||||| ||||||||| |  |||||||||| |||   |||||||||||||||||||||    
T  34275298 tttagattcattcatttaatgatgcacatagtctttattatagaccacatacatcattaaatgaat 34275233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 20353184 - 20353152
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtc 51  Q
    ||||||| |||||||||||||||||||||||||    
T  20353184 tttagattcattcaattaatgatgtatgtagtc 20353152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 1e-19; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 11262361 - 11262426
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||| ||||||||||||||||||||| |||||||| ||||||||||||||||||||| |||||    
T  11262361 tttagatacattcaattaatgatgtatgtggtctttattatatgtcacatacatcattaattgaat 11262426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 19531408 - 19531343
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||| ||||||||||||||||||||| |||||||| ||||||||||||||||||||| |||||    
T  19531408 tttagatacattcaattaatgatgtatgtggtctttattatatgtcacatacatcattaattgaat 19531343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 23914874 - 23914939
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||| ||||||||||||||||||||| |||||||| |||||||||||||||| ||||||||||    
T  23914874 tttagatacattcaattaatgatgtatgtggtctttattatatgtcacatacatccttaaatgaat 23914939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 42013855 - 42013920
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||| ||||||||||||||||||||| |||||||| ||||||||||||||||||||| |||||    
T  42013855 tttagatacattcaattaatgatgtatgtggtctttattatatgtcacatacatcattaattgaat 42013920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 3851396 - 3851455
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaa 78  Q
    ||||||| ||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  3851396 tttagatacattcaattaatgatgtatgtggtctttattatatgtcacatacatcattaa 3851455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 8961252 - 8961317
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||| |||||||||||| |||||||| |||||||| ||||||||||||||||||||| |||||    
T  8961252 tttagatacattcaattaataatgtatgtggtctttattatatgtcacatacatcattaattgaat 8961317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 13311207 - 13311272
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||| ||||||||||||||||||||| |||||||| |||||| |||||||||||||| |||||    
T  13311207 tttagatacattcaattaatgatgtatgtggtctttattatatgttacatacatcattaattgaat 13311272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 27 - 84
Target Start/End: Complemental strand, 15712220 - 15712163
Alignment:
Q  27 cattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||||||| |||||    
T  15712220 cattcaattaatgatgtatgtggtctttattatatgtcacatacatcattaattgaat 15712163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 26300144 - 26300209
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||| ||||||||||||||||||||| |||||||| |||||||| |||||||||||| |||||    
T  26300144 tttagatacattcaattaatgatgtatgtggtctttattatatgtcatatacatcattaattgaat 26300209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 37944635 - 37944700
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||| |||||||||||||||||||||  ||||||| ||||||||||||||||||||| |||||    
T  37944635 tttagatacattcaattaatgatgtatgtgatctttattatatgtcacatacatcattaattgaat 37944700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 35969236 - 35969177
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaa 78  Q
    ||||||| ||||||||||||| |||||||||||||||| ||||| |||||||||||||||    
T  35969236 tttagatacattcaattaatggtgtatgtagtctttattatatgccacatacatcattaa 35969177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 28 - 85
Target Start/End: Complemental strand, 21945478 - 21945421
Alignment:
Q  28 attcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaatt 85  Q
    |||||||||||||||||| | |||||||| ||||||||||||||||||||| ||||||    
T  21945478 attcaattaatgatgtatctggtctttattatatgtcacatacatcattaattgaatt 21945421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 13157366 - 13157431
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    |||||||  |||||||||||||||||| | |||||||| |||| |||||||||||||||| |||||    
T  13157366 tttagatatattcaattaatgatgtatatggtctttattatatatcacatacatcattaattgaat 13157431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 37870050 - 37870115
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||| ||||||||||||  ||||| |||||||||| ||||||||||| ||||||||| |||||    
T  37870050 tttagatacattcaattaatattgtatatagtctttattatatgtcacattcatcattaattgaat 37870115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 34 - 78
Target Start/End: Complemental strand, 43446951 - 43446907
Alignment:
Q  34 ttaatgatgtatgtagtctttatcatatgtcacatacatcattaa 78  Q
    |||||||||||||| |||||||| |||||||||||||||||||||    
T  43446951 ttaatgatgtatgtggtctttattatatgtcacatacatcattaa 43446907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 78
Target Start/End: Complemental strand, 38835624 - 38835573
Alignment:
Q  27 cattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaa 78  Q
    |||||||||||||||||||   |||||||| |||||||||||||||||||||    
T  38835624 cattcaattaatgatgtatacggtctttattatatgtcacatacatcattaa 38835573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 84
Target Start/End: Complemental strand, 35172529 - 35172472
Alignment:
Q  27 cattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    |||||||||||| |||||||| |||| ||| ||| ||||||||||||||||| |||||    
T  35172529 cattcaattaataatgtatgtggtctatattataggtcacatacatcattaattgaat 35172472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 14416439 - 14416498
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaa 78  Q
    ||||||| ||||||||||||||||||||| |||  ||| |||  ||||||||||||||||    
T  14416439 tttagattcattcaattaatgatgtatgtggtccatattataaatcacatacatcattaa 14416498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 1100164 - 1100099
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    |||||||  ||||| | ||||||||||||||||||||| |||   ||||||||||||| |||||||    
T  1100164 tttagattaattcattaaatgatgtatgtagtctttattatagaccacatacatcatttaatgaat 1100099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 5259492 - 5259427
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||| |||||| ||||||||| |  |||||||||| |||   |||||||||||||||||||||    
T  5259492 tttagattcattcatttaatgatgcacatagtctttattatagaccacatacatcattaaatgaat 5259427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 9004980 - 9005045
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||| |||| ||||||||||||||||||||| ||  |||  |||||||||| ||||| |||||    
T  9004980 tttagattcatttaattaatgatgtatgtagtctataatataaatcacatacattattaattgaat 9005045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 11795769 - 11795834
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||| ||||||||||||||||||| | |||||||| |||   |||||| |||||| |||||||    
T  11795769 tttagattcattcaattaatgatgtatatggtctttattatagaccacatatatcatttaatgaat 11795834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 84
Target Start/End: Original strand, 15965997 - 15966054
Alignment:
Q  27 cattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||||||||||||||||| |||| ||| |||   ||||||||||||||| |||||    
T  15965997 cattcaattaatgatgtatgtggtctatattataaaccacatacatcattaattgaat 15966054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 84
Target Start/End: Complemental strand, 21152687 - 21152630
Alignment:
Q  27 cattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||||||||||||||||| |||  ||| |||  |||||||||||||||| |||||    
T  21152687 cattcaattaatgatgtatgtggtccatattataaatcacatacatcattaattgaat 21152630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 84
Target Start/End: Complemental strand, 21159822 - 21159765
Alignment:
Q  27 cattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||||||||||||||||| |||  ||| |||  |||||||||||||||| |||||    
T  21159822 cattcaattaatgatgtatgtggtccatattataaatcacatacatcattaattgaat 21159765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 84
Target Start/End: Complemental strand, 21163629 - 21163572
Alignment:
Q  27 cattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||||||||||||||||| |||  ||| |||  |||||||||||||||| |||||    
T  21163629 cattcaattaatgatgtatgtggtccatattataaatcacatacatcattaattgaat 21163572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 27895930 - 27895986
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcatt 76  Q
    ||||||| |||| ||| ||||||||||||||||| ||| ||| |||||||||||||||    
T  27895930 tttagattcatttaataaatgatgtatgtagtctatat-ataggtcacatacatcatt 27895986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 30778033 - 30778090
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcatt 76  Q
    ||||||| |||||||||||| |||||| |||||| ||  |||| ||||||||||||||    
T  30778033 tttagattcattcaattaataatgtatttagtctataatatatatcacatacatcatt 30778090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 36137048 - 36137113
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||| |||||||||||||||||||||||||  ||   ||  |||||||||||||||| |||||    
T  36137048 tttagattcattcaattaatgatgtatgtagtccataatttaaatcacatacatcattaattgaat 36137113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 37685077 - 37685012
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||| |||||||||||| ||||||||||||| ||| ||    ||||||||||||||| |||||    
T  37685077 tttagattcattcaattaataatgtatgtagtctatattatgaaccacatacatcattaattgaat 37685012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 20362010 - 20362042
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtc 51  Q
    ||||||| |||||||||||||||||||||||||    
T  20362010 tttagattcattcaattaatgatgtatgtagtc 20362042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 84
Target Start/End: Complemental strand, 37637367 - 37637311
Alignment:
Q  28 attcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||||||| ||||||||||| | ||| ||  ||||||||||||||||| |||||    
T  37637367 attcaattaataatgtatgtagtttatattatgagtcacatacatcattaattgaat 37637311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 50; Significance: 1e-19; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 639832 - 639897
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||| ||||||||||||||||||||| |||||||| |||||||||||||||| ||||||||||    
T  639832 tttagatacattcaattaatgatgtatgtggtctttattatatgtcacatacatccttaaatgaat 639897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 2349863 - 2349798
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||||| ||||||||| |||||    
T  2349863 tttagatacattcaattaatgatgtatgtagtctttattatatgtcacatgcatcattaattgaat 2349798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 27206792 - 27206857
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||| ||||||||||||| |||||    
T  27206792 tttagatacattcaattaatgatgtatgtagtctttattatatgtcgcatacatcattaattgaat 27206857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 33604098 - 33604033
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||| ||||||||||||||||||||| |||||||| |||||||||||||||| ||||||||||    
T  33604098 tttagatacattcaattaatgatgtatgtggtctttattatatgtcacatacatccttaaatgaat 33604033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 48022628 - 48022693
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||| ||||||||||||||||||||| |||||||| |||||||||||||||| ||||||||||    
T  48022628 tttagatacattcaattaatgatgtatgtggtctttattatatgtcacatacatccttaaatgaat 48022693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 8258050 - 8257985
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||| ||||||||||||||||||||| |||||||| ||||||||||||||| ||||| |||||    
T  8258050 tttagatacattcaattaatgatgtatgtggtctttattatatgtcacatacattattaattgaat 8257985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 37734880 - 37734815
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||| ||||||||||||||||||||  |||||||| ||||||||||||||||||||| |||||    
T  37734880 tttagatacattcaattaatgatgtatgcggtctttattatatgtcacatacatcattaattgaat 37734815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 3384330 - 3384265
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||| ||||||||| |||||||||||  ||||||| ||||||||||||||||||||| |||||    
T  3384330 tttagatacattcaattgatgatgtatgtgatctttattatatgtcacatacatcattaattgaat 3384265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 6065568 - 6065503
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||| ||||||||||||||||||||| ||| |||| ||||||||||| ||||||||| |||||    
T  6065568 tttagatacattcaattaatgatgtatgtggtccttattatatgtcacatccatcattaattgaat 6065503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 31008292 - 31008357
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||| |||| |||||||||||||||| |||||||| |||||| |||||||||||||| |||||    
T  31008292 tttagatacatttaattaatgatgtatgtggtctttattatatgttacatacatcattaattgaat 31008357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 27 - 84
Target Start/End: Complemental strand, 40262567 - 40262510
Alignment:
Q  27 cattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    |||| |||||||||||||||| |||||||| ||||||||||||||||||||| |||||    
T  40262567 catttaattaatgatgtatgtggtctttattatatgtcacatacatcattaattgaat 40262510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 28 - 84
Target Start/End: Original strand, 35367520 - 35367576
Alignment:
Q  28 attcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||||||||||| |||| |||||||| ||||||||||||||||||||| |||||    
T  35367520 attcaattaatgatgcatgtggtctttataatatgtcacatacatcattaattgaat 35367576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 78
Target Start/End: Complemental strand, 34658485 - 34658434
Alignment:
Q  27 cattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaa 78  Q
    |||||||||||| |||||||| |||||||| |||||||||||||||||||||    
T  34658485 cattcaattaataatgtatgtggtctttattatatgtcacatacatcattaa 34658434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 4602751 - 4602686
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||| ||||||||||||||| ||||| || ||||| |||||||||||| |||||||| |||||    
T  4602751 tttagatacattcaattaatgatatatgtggtatttattatatgtcacatatatcattaattgaat 4602686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 84
Target Start/End: Complemental strand, 5856456 - 5856399
Alignment:
Q  27 cattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    |||||||||||| |||||||| |||||||| ||||||||| ||||||||||| |||||    
T  5856456 cattcaattaattatgtatgtggtctttattatatgtcacgtacatcattaattgaat 5856399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 14418099 - 14418148
Alignment:
Q  28 attcaattaatgatgtatgtagtctttatcatatgtcacatacatcatta 77  Q
    |||| ||||||||||||||| |||||||| ||||||||||||||||||||    
T  14418099 attctattaatgatgtatgtggtctttattatatgtcacatacatcatta 14418148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 84
Target Start/End: Complemental strand, 15439961 - 15439904
Alignment:
Q  27 cattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    |||||||||||| |||||||| |||||||| |||||||||||| |||||||| |||||    
T  15439961 cattcaattaataatgtatgtggtctttattatatgtcacatatatcattaattgaat 15439904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 2353002 - 2352937
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||| |||| ||||||||||||||||  ||||||| |||||||| |||| ||||||| |||||    
T  2353002 tttagatacatttaattaatgatgtatgtgctctttattatatgtcaaatacgtcattaattgaat 2352937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 34954003 - 34953938
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||| ||||||||||||||||||| | |||||||| |||   ||||||||||||| |||||||    
T  34954003 tttagattcattcaattaatgatgtatatggtctttattatagaccacatacatcatttaatgaat 34953938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 8465959 - 8466020
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaat 80  Q
    ||||||| |||| | |||||||||||||| |||||||| |||   |||||||||||||||||    
T  8465959 tttagattcatttatttaatgatgtatgtggtctttattatagaccacatacatcattaaat 8466020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 14967332 - 14967267
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||| |||||| | ||||||||||||  ||||||| ||| | ||||||||||||| |||||||    
T  14967332 tttagattcattcattaaatgatgtatgtgatctttattataggccacatacatcatttaatgaat 14967267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 84
Target Start/End: Complemental strand, 15278664 - 15278607
Alignment:
Q  27 cattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||||||||||||||||| || | ||  |||  ||||||||||||||||||||||    
T  15278664 cattcaattaatgatgtatgtggtttataatatagatcacatacatcattaaatgaat 15278607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 84
Target Start/End: Original strand, 31909790 - 31909847
Alignment:
Q  27 cattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||||||||||||||||| |||| ||| |||   ||||||||||||||| |||||    
T  31909790 cattcaattaatgatgtatgtggtctatattataaaccacatacatcattaattgaat 31909847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 38824398 - 38824333
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||| ||||||||||||||||||||| |||| ||| ||    ||||||||||||||| |||||    
T  38824398 tttagattcattcaattaatgatgtatgtggtctatattatgaaccacatacatcattaattgaat 38824333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 84
Target Start/End: Original strand, 38847343 - 38847400
Alignment:
Q  27 cattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    |||||| |||||||||||||| |||| ||| |||   |||||||||||||||||||||    
T  38847343 cattcatttaatgatgtatgtggtctatattataaaccacatacatcattaaatgaat 38847400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 84
Target Start/End: Complemental strand, 39216202 - 39216145
Alignment:
Q  27 cattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||||||||||||||| |||||||||| |||    |||||||||||||| |||||    
T  39216202 cattcaattaatgatgtatatagtctttattatagacaacatacatcattaattgaat 39216145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 41007784 - 41007719
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||| |||||| | |||||||||||| |||||||| |||   ||||||||||||| |||||||    
T  41007784 tttagattcattcattaaatgatgtatgtggtctttattatagaccacatacatcatttaatgaat 41007719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 45925277 - 45925342
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||| |||||| |||||||||||||| |||| ||| ||    |||||||||||||||||||||    
T  45925277 tttagattcattcatttaatgatgtatgtggtctatattatgaaccacatacatcattaaatgaat 45925342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 84
Target Start/End: Complemental strand, 52253637 - 52253580
Alignment:
Q  27 cattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    |||||||||||||||| ||||||||  ||| |||  |||||||||||||||| |||||    
T  52253637 cattcaattaatgatgcatgtagtccatattataaatcacatacatcattaattgaat 52253580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 3e-17; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 7377587 - 7377652
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||| ||||||||||||||||||||| | |||||| ||||||||||||||||||||| |||||    
T  7377587 tttagatacattcaattaatgatgtatgtgggctttattatatgtcacatacatcattaattgaat 7377652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 9056128 - 9056063
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||| |||| |||||||||||||||| |||||||| ||||||||||||||||||||| |||||    
T  9056128 tttagatacatttaattaatgatgtatgtggtctttattatatgtcacatacatcattaattgaat 9056063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 14381271 - 14381336
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||| ||||||||||||||||||||| |||||||| |||| |||||||||||||||| |||||    
T  14381271 tttagatacattcaattaatgatgtatgtggtctttattatatatcacatacatcattaattgaat 14381336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 40098867 - 40098802
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||| ||||||||||||||||||||| |||||||| |||||||||||| |||||||| |||||    
T  40098867 tttagatacattcaattaatgatgtatgtggtctttattatatgtcacatatatcattaattgaat 40098802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 26014602 - 26014661
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaa 78  Q
    ||||||| ||||||||||||||||||||| |||||||| ||||||||||||||| |||||    
T  26014602 tttagatacattcaattaatgatgtatgtggtctttattatatgtcacatacattattaa 26014661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 13211272 - 13211337
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||| |||| |||||||||| ||||| |||||||| ||||||||||||||||||||| |||||    
T  13211272 tttagatacatttaattaatgatatatgtggtctttattatatgtcacatacatcattaattgaat 13211337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 13228977 - 13228912
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||| |||| |||||||||||||||| |||||||| |||||||||||| |||||||| |||||    
T  13228977 tttagatacatttaattaatgatgtatgtggtctttattatatgtcacatatatcattaattgaat 13228912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 78
Target Start/End: Complemental strand, 15285752 - 15285701
Alignment:
Q  27 cattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaa 78  Q
    ||||||||||| ||||||| |||||||||| |||||||||||||||||||||    
T  15285752 cattcaattaaggatgtatatagtctttattatatgtcacatacatcattaa 15285701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 78
Target Start/End: Complemental strand, 15466121 - 15466070
Alignment:
Q  27 cattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaa 78  Q
    ||||||||||| ||||||| |||||||||| |||||||||||||||||||||    
T  15466121 cattcaattaaggatgtatatagtctttattatatgtcacatacatcattaa 15466070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 84
Target Start/End: Complemental strand, 29451826 - 29451769
Alignment:
Q  27 cattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    |||||||||||| |||||||| ||||| || ||||||||||||||||||||| |||||    
T  29451826 cattcaattaataatgtatgtggtcttaattatatgtcacatacatcattaattgaat 29451769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 37716107 - 37716172
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    |||||||  ||| |||||||||| |||||||||||||| |||| |||||||||||||||| |||||    
T  37716107 tttagatatatttaattaatgatatatgtagtctttattatatatcacatacatcattaattgaat 37716172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 32 - 84
Target Start/End: Original strand, 11692093 - 11692145
Alignment:
Q  32 aattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||||||||||||  ||||||| ||||||||||||||||||||| |||||    
T  11692093 aattaatgatgtatgtgatctttattatatgtcacatacatcattaattgaat 11692145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 33574894 - 33574845
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacata 69  Q
    ||||||| ||||||||||||||||||||| | |||||| ||||||||||||    
T  33574894 tttagatacattcaattaatgatgtatgt-ggctttattatatgtcacata 33574845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 84
Target Start/End: Original strand, 10934644 - 10934701
Alignment:
Q  27 cattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    |||| |||||||||||||||||||||||||  ||   ||||||||||||| |||||||    
T  10934644 catttaattaatgatgtatgtagtctttattgtagaccacatacatcatttaatgaat 10934701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 84
Target Start/End: Complemental strand, 34326344 - 34326287
Alignment:
Q  27 cattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||||||||||||||| |||||||||| |||    |||||||||||||| |||||    
T  34326344 cattcaattaatgatgtatatagtctttattataaacaacatacatcattaattgaat 34326287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 76
Target Start/End: Original strand, 35874506 - 35874555
Alignment:
Q  27 cattcaattaatgatgtatgtagtctttatcatatgtcacatacatcatt 76  Q
    |||| |||||||||||||| |||||||||| |||  ||||||||||||||    
T  35874506 catttaattaatgatgtatatagtctttattataaatcacatacatcatt 35874555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 40640385 - 40640320
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||| ||||||||||||||||||  |||||||||| |||   ||| ||||||||| |||||||    
T  40640385 tttagattcattcaattaatgatgtacatagtctttattatagaccacgtacatcatttaatgaat 40640320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 87
Target Start/End: Complemental strand, 36314957 - 36314897
Alignment:
Q  27 cattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaattaa 87  Q
    |||||| |||||||||||||| |||| ||| ||    ||||||||||||||||||||||||    
T  36314957 cattcatttaatgatgtatgtggtctatattatgaaccacatacatcattaaatgaattaa 36314897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 3e-17; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 21506570 - 21506505
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||| |||||||||||||||||||||  ||||||| ||||||||||||||||||||| |||||    
T  21506570 tttagatacattcaattaatgatgtatgtgatctttattatatgtcacatacatcattaattgaat 21506505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 17773534 - 17773599
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||| |||||||| |||||||||||| |||||||| |||| |||||||||||||||| |||||    
T  17773534 tttagatacattcaataaatgatgtatgtggtctttattatatatcacatacatcattaattgaat 17773599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 30397758 - 30397822
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||| ||||||||||||||||||||| | |||||| ||||||||||||||||||||| |||||    
T  30397758 tttagatacattcaattaatgatgtatgtgg-ctttattatatgtcacatacatcattaattgaat 30397822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 84
Target Start/End: Original strand, 17268054 - 17268111
Alignment:
Q  27 cattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    |||| |||||||||||||||| |||||||| ||||||||||||||| ||||| |||||    
T  17268054 catttaattaatgatgtatgtggtctttattatatgtcacatacattattaattgaat 17268111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 21998072 - 21998137
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||| |||||||||||| ||||||||  | ||||| ||||||||||||||||||||| |||||    
T  21998072 tttagatacattcaattaataatgtatgtgatatttattatatgtcacatacatcattaattgaat 21998137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 30460720 - 30460663
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcatt 76  Q
    |||||||  |||||||||||||||||||| |||||||| |||| ||||||||||||||    
T  30460720 tttagatagattcaattaatgatgtatgtggtctttattatatatcacatacatcatt 30460663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 19 - 87
Target Start/End: Complemental strand, 12349922 - 12349854
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaattaa 87  Q
    ||||||| |||||| |||||||||||||| |||  ||| ||  ||||||||||||||||||||||||||    
T  12349922 tttagattcattcatttaatgatgtatgtggtccatattatgagtcacatacatcattaaatgaattaa 12349854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 6048063 - 6047998
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||| ||||||||||||||||||||| ||   ||| ||  ||||||||||||||||| |||||    
T  6048063 tttagattcattcaattaatgatgtatgtggttcatattatgggtcacatacatcattaattgaat 6047998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 6560764 - 6560699
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||| |||||| ||||||||| |  |||||||||| |||   |||||||||||||||||||||    
T  6560764 tttagattcattcatttaatgatgcacatagtctttattatagaccacatacatcattaaatgaat 6560699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 8146056 - 8145991
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||| |||||| |||||||||||  | |||||||| |||   |||||||||||||||||||||    
T  8146056 tttagattcattcatttaatgatgtacatggtctttattatagaccacatacatcattaaatgaat 8145991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 84
Target Start/End: Complemental strand, 10731572 - 10731515
Alignment:
Q  27 cattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||||||||||||||||| || | ||  |||  ||||||||||||||||||||||    
T  10731572 cattcaattaatgatgtatgtggtttataatatagatcacatacatcattaaatgaat 10731515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 3e-17; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 5418622 - 5418557
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||| |||| |||||||||||||||| |||||||| ||||||||||||||||||||| |||||    
T  5418622 tttagatacattgaattaatgatgtatgtggtctttattatatgtcacatacatcattaattgaat 5418557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 13689643 - 13689578
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||| |||||||||||| |||||||| |||||||| ||||||||||||||||||||| |||||    
T  13689643 tttagattcattcaattaataatgtatgttgtctttattatatgtcacatacatcattaattgaat 13689578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 52817674 - 52817609
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||| |||||||||||||||||||||  ||||||| |||||||||||||||| ||||||||||    
T  52817674 tttagatacattcaattaatgatgtatgtgatctttattatatgtcacatacatccttaaatgaat 52817609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 24941144 - 24941209
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||| ||||||||||||||||||||| |||||||| |||| ||| |||||||||||| |||||    
T  24941144 tttagatacattcaattaatgatgtatgtggtctttattatatatcaaatacatcattaattgaat 24941209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 40881534 - 40881477
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcatt 76  Q
    ||||||| ||||||||||||||||||| |  ||||||| |||||||||||||||||||    
T  40881534 tttagattcattcaattaatgatgtatatgatctttattatatgtcacatacatcatt 40881477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 5281242 - 5281192
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacata 69  Q
    ||||||| |||||||||||||||||||||  ||||||| ||||||||||||    
T  5281242 tttagatacattcaattaatgatgtatgtgatctttattatatgtcacata 5281192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 78
Target Start/End: Original strand, 10031563 - 10031613
Alignment:
Q  28 attcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaa 78  Q
    ||||||||||||||||||||  ||||||| ||||||||||||||| |||||    
T  10031563 attcaattaatgatgtatgtgatctttattatatgtcacatacattattaa 10031613  T

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Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 84
Target Start/End: Complemental strand, 4406340 - 4406283
Alignment:
Q  27 cattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||||||||||||||||| |||||||| |||   ||||||||||||| |||||||    
T  4406340 cattcaattaatgatgtatgtggtctttattatagaccacatacatcatttaatgaat 4406283  T

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Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 36786183 - 36786240
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcatt 76  Q
    ||||||| ||||||||||||||||||| |||||||||| |||   |||||||||||||    
T  36786183 tttagattcattcaattaatgatgtatatagtctttattataaaccacatacatcatt 36786240  T

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Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 56328557 - 56328492
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||| |||||| ||||||||| || |||||||||| |||   |||||||||||||||||||||    
T  56328557 tttagattcattcatttaatgatgcatatagtctttattatagaccacatacatcattaaatgaat 56328492  T

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Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 83
Target Start/End: Original strand, 4484107 - 4484171
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaa 83  Q
    ||||||| ||||||||||||||||||| | |||||||| |||   ||||||||||||| ||||||    
T  4484107 tttagattcattcaattaatgatgtatatggtctttattatagaccacatacatcatttaatgaa 4484171  T

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Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 85
Target Start/End: Complemental strand, 21587025 - 21586959
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaatt 85  Q
    ||||||| |||||||| ||||||||||||||||| ||  ||| | ||||||||||||| | ||||||    
T  21587025 tttagattcattcaataaatgatgtatgtagtctataatataggacacatacatcatttattgaatt 21586959  T

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Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 8826972 - 8826907
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||| |||| | |||||||||||| | |||||||| |||  |||||||||||||| |||||||    
T  8826972 tttagattcatttatttaatgatgtatatggtctttattatagatcacatacatcatttaatgaat 8826907  T

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Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 9011852 - 9011787
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||| |||||| |||||||||||||| |||| ||| ||    |||||||||||||||||||||    
T  9011852 tttagattcattcatttaatgatgtatgtggtctatattatgaaccacatacatcattaaatgaat 9011787  T

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Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 18423925 - 18423990
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||| ||||||||||||||||||| |  ||||||| |||  ||| |||||||||| |||||||    
T  18423925 tttagattcattcaattaatgatgtatatgatctttattataaatcatatacatcatttaatgaat 18423990  T

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Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 84
Target Start/End: Complemental strand, 20542902 - 20542845
Alignment:
Q  27 cattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||||||||||||||||| |||| ||| |||   ||||||||||||||| |||||    
T  20542902 cattcaattaatgatgtatgtggtctatattataacccacatacatcattaattgaat 20542845  T

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Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 76
Target Start/End: Original strand, 24448706 - 24448755
Alignment:
Q  27 cattcaattaatgatgtatgtagtctttatcatatgtcacatacatcatt 76  Q
    |||| |||||||||||||| |||||||||| |||  ||||||||||||||    
T  24448706 catttaattaatgatgtatatagtctttattataaatcacatacatcatt 24448755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 31808429 - 31808364
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||| |||||| |||||||||||||| |||| ||| ||    |||||||||||||||||||||    
T  31808429 tttagattcattcatttaatgatgtatgtggtctatattatgaaccacatacatcattaaatgaat 31808364  T

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Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 84
Target Start/End: Complemental strand, 34321481 - 34321424
Alignment:
Q  27 cattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    |||||| ||||||||||||||||||| ||| ||    |||||||||||||||||||||    
T  34321481 cattcatttaatgatgtatgtagtctatattatgaaccacatacatcattaaatgaat 34321424  T

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Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 52
Target Start/End: Original strand, 40952572 - 40952605
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtct 52  Q
    ||||||| ||||||||||||||||||||||||||    
T  40952572 tttagattcattcaattaatgatgtatgtagtct 40952605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 84
Target Start/End: Original strand, 42013187 - 42013244
Alignment:
Q  27 cattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||||||||||||||||| |||| ||| |||   ||||||||||||||| |||||    
T  42013187 cattcaattaatgatgtatgtggtctatattataaaccacatacatcattaattgaat 42013244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 84
Target Start/End: Original strand, 51126146 - 51126203
Alignment:
Q  27 cattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||||||||||||||||| |||| ||| |||   ||||||||||||||| |||||    
T  51126146 cattcaattaatgatgtatgtggtctatattatagaccacatacatcattaattgaat 51126203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 6243733 - 6243673
Alignment:
Q  18 atttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaa 78  Q
    |||||||| ||||||||||||||||||| || ||||| | |||| ||||||| || |||||    
T  6243733 atttagatacattcaattaatgatgtatataatcttttttatatatcacatatattattaa 6243673  T

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Target: scaffold0047 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 61269 - 61205
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||| ||||||||||||||||||||| | |||||| ||||||||||||||||||||| |||||    
T  61269 tttagatacattcaattaatgatgtatgtgg-ctttattatatgtcacatacatcattaattgaat 61205  T

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Target: scaffold0007 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 246828 - 246893
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||| ||||||||||||||||||||| || ||||| |||||||| |||||||||||| |||||    
T  246828 tttagatacattcaattaatgatgtatgtggtttttattatatgtcagatacatcattaattgaat 246893  T

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Target: scaffold0039 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 54495 - 54430
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||| ||||||||||||||||||||| ||| |||| |||| ||| |||||||||||| |||||    
T  54495 tttagatacattcaattaatgatgtatgtggtccttattatatatcatatacatcattaattgaat 54430  T

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Target: scaffold0024 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 120178 - 120243
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||| ||||||||||||||||||||| || |||||  ||| |||||||||||||||| |||||    
T  120178 tttagatacattcaattaatgatgtatgtggtatttattgtatatcacatacatcattaattgaat 120243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0536 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0536
Description:

Target: scaffold0536; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 76
Target Start/End: Original strand, 3998 - 4040
Alignment:
Q  34 ttaatgatgtatgtagtctttatcatatgtcacatacatcatt 76  Q
    |||||||||||||| |||||||| |||||||||||||| ||||    
T  3998 ttaatgatgtatgtggtctttattatatgtcacatacaacatt 4040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 84
Target Start/End: Original strand, 17475 - 17532
Alignment:
Q  27 cattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    |||||| |||||||||||||| |||| ||| |||   |||||||||||||||||||||    
T  17475 cattcatttaatgatgtatgtggtctatattataaaccacatacatcattaaatgaat 17532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 146075 - 146010
Alignment:
Q  19 tttagatgcattcaattaatgatgtatgtagtctttatcatatgtcacatacatcattaaatgaat 84  Q
    ||||||| ||||||||||||||||||| | ||||||||  ||   ||||||||||||| |||||||    
T  146075 tttagattcattcaattaatgatgtatatggtctttattttagaccacatacatcatttaatgaat 146010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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