View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4934_low_29 (Length: 229)
Name: NF4934_low_29
Description: NF4934
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4934_low_29 |
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Alignment Details
Target: chr7 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 47116794 - 47116595
Alignment:
| Q |
1 |
gtatgaggaagcttggagtggtgtccatctattgtggaaggattggggattcgttcattaacataacatcattgaatgagatgtatgacgtggaaatttt |
100 |
Q |
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| T |
47116794 |
gtatgaggaagcttggagtggtgtccatctattgtggaaggattggggattcgttcattaacataacatcattgaatgagatgtatgacgtggaactttt |
47116695 |
T |
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| Q |
101 |
ctttgtaactgtctccccgaactttcagtaattaataccacaattagcacaaataatttctttcattttctctttccttaccagttttccaccaaataat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47116694 |
ctttgtaactgtctccccgaactttcagtaattaataccacaattagcacaaataatttctttcattttctctttccttaccagttttccaccaaataat |
47116595 |
T |
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