View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4934_low_30 (Length: 217)
Name: NF4934_low_30
Description: NF4934
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4934_low_30 |
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Alignment Details
Target: chr8 (Bit Score: 176; Significance: 5e-95; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 176; E-Value: 5e-95
Query Start/End: Original strand, 19 - 198
Target Start/End: Complemental strand, 40626279 - 40626100
Alignment:
| Q |
19 |
tattcaccatctgattcaatccattttcaggatgatcatgtgtttgtggtactggtgatgacagaagagagagagcacaagaagtgttgttgtcacaaaa |
118 |
Q |
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| T |
40626279 |
tattcaccatctgattcaatccattttcaggatgatcatgtgtttgtggtactggtgatgacagaagagagagagcacaagaagtgttgttgtcacaaaa |
40626180 |
T |
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| Q |
119 |
cattttgtatctttctgaaaaaggattggtcctgctaaaggtgcgactcatggatgaagctggaagaggttgattgttca |
198 |
Q |
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||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
40626179 |
cattttgtatctttctgaaaaaggattggtcctgctaaacgtgcgactcatggatgaagctggaagaggttgattgttca |
40626100 |
T |
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