View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4936_high_10 (Length: 313)

Name: NF4936_high_10
Description: NF4936
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4936_high_10
NF4936_high_10
[»] scaffold0372 (2 HSPs)
scaffold0372 (234-305)||(6167-6239)
scaffold0372 (1-48)||(6279-6326)
[»] chr5 (30 HSPs)
chr5 (233-307)||(19473830-19473905)
chr5 (233-305)||(20294786-20294859)
chr5 (233-286)||(18355055-18355108)
chr5 (242-307)||(11226427-11226493)
chr5 (233-286)||(24768237-24768290)
chr5 (1-48)||(19474131-19474178)
chr5 (1-48)||(20294587-20294634)
chr5 (233-307)||(11219849-11219927)
chr5 (233-307)||(11224435-11224513)
chr5 (233-307)||(11230247-11230325)
chr5 (253-307)||(18355179-18355234)
chr5 (1-46)||(18354870-18354915)
chr5 (253-305)||(40727069-40727122)
chr5 (233-301)||(11228257-11228329)
chr5 (1-39)||(24768530-24768568)
chr5 (6-46)||(11219622-11219662)
chr5 (6-46)||(11224208-11224248)
chr5 (6-46)||(11226224-11226264)
chr5 (6-46)||(11228030-11228070)
chr5 (6-46)||(11230020-11230060)
chr5 (1-50)||(15238076-15238123)
chr5 (1-50)||(20912211-20912258)
chr5 (1-50)||(40727358-40727405)
chr5 (1-49)||(22108409-22108455)
chr5 (233-273)||(20912104-20912144)
chr5 (241-281)||(22108196-22108236)
chr5 (233-279)||(5889817-5889863)
chr5 (241-286)||(22120335-22120381)
chr5 (247-279)||(5889886-5889918)
chr5 (234-278)||(20912132-20912176)
[»] chr3 (60 HSPs)
chr3 (233-307)||(11069036-11069111)
chr3 (233-305)||(7108584-7108657)
chr3 (233-305)||(7112519-7112592)
chr3 (233-305)||(14498293-14498366)
chr3 (233-305)||(15616523-15616596)
chr3 (233-305)||(22320552-22320625)
chr3 (233-305)||(22335607-22335680)
chr3 (233-305)||(28948730-28948803)
chr3 (233-305)||(30064735-30064808)
chr3 (233-305)||(55021873-55021946)
chr3 (233-305)||(11166676-11166749)
chr3 (233-307)||(14067672-14067747)
chr3 (233-281)||(11301389-11301437)
chr3 (1-48)||(7108311-7108358)
chr3 (1-48)||(7112246-7112293)
chr3 (1-48)||(11068686-11068733)
chr3 (1-48)||(11167052-11167099)
chr3 (1-48)||(22320202-22320249)
chr3 (1-48)||(22335257-22335304)
chr3 (1-48)||(28948534-28948581)
chr3 (1-48)||(55021449-55021496)
chr3 (233-281)||(14664735-14664783)
chr3 (233-281)||(14667899-14667947)
chr3 (233-307)||(15963791-15963869)
chr3 (233-307)||(15967715-15967793)
chr3 (233-307)||(15971639-15971717)
chr3 (1-48)||(14498020-14498067)
chr3 (1-48)||(15616250-15616297)
chr3 (6-48)||(4112607-4112649)
chr3 (6-47)||(4108759-4108800)
chr3 (1-46)||(5219920-5219965)
chr3 (1-46)||(11853779-11853824)
chr3 (1-46)||(14664498-14664543)
chr3 (1-46)||(14667662-14667707)
chr3 (1-46)||(37440641-37440686)
chr3 (250-305)||(4108387-4108443)
chr3 (250-305)||(4112239-4112295)
chr3 (5-46)||(11301626-11301667)
chr3 (1-49)||(16795576-16795622)
chr3 (233-277)||(4589893-4589936)
chr3 (6-46)||(15963564-15963604)
chr3 (6-46)||(15967488-15967528)
chr3 (6-46)||(15971412-15971452)
chr3 (233-281)||(14067732-14067777)
chr3 (1-50)||(14068021-14068068)
chr3 (233-279)||(18440583-18440629)
chr3 (233-279)||(19485657-19485703)
chr3 (233-279)||(49390328-49390374)
chr3 (241-277)||(16751580-16751616)
chr3 (241-277)||(19774548-19774584)
chr3 (1-47)||(12853325-12853369)
chr3 (1-50)||(4590119-4590166)
chr3 (2-50)||(15463952-15463999)
chr3 (1-50)||(17318468-17318515)
chr3 (233-279)||(18440505-18440551)
chr3 (233-279)||(19485579-19485625)
chr3 (9-49)||(14670104-14670142)
chr3 (9-49)||(14681626-14681664)
chr3 (3-50)||(8490350-8490395)
chr3 (233-261)||(27410959-27410987)
[»] scaffold0349 (2 HSPs)
scaffold0349 (233-305)||(11402-11475)
scaffold0349 (1-48)||(11124-11170)
[»] chr8 (27 HSPs)
chr8 (233-305)||(22110936-22111009)
chr8 (233-305)||(43250696-43250769)
chr8 (233-305)||(21973689-21973762)
chr8 (244-305)||(21977780-21977842)
chr8 (1-48)||(21974142-21974189)
chr8 (1-48)||(21978252-21978299)
chr8 (233-307)||(18863811-18863889)
chr8 (233-307)||(30941271-30941349)
chr8 (1-48)||(43250275-43250322)
chr8 (6-48)||(21829430-21829472)
chr8 (1-46)||(14399053-14399098)
chr8 (1-46)||(21409974-21410019)
chr8 (1-46)||(21804466-21804511)
chr8 (250-305)||(21829139-21829195)
chr8 (240-286)||(15924297-15924344)
chr8 (6-48)||(22110668-22110710)
chr8 (1-49)||(23913338-23913384)
chr8 (6-46)||(18864076-18864116)
chr8 (6-46)||(30941536-30941576)
chr8 (1-50)||(21386232-21386279)
chr8 (1-49)||(23427899-23427945)
chr8 (1-49)||(44385793-44385839)
chr8 (239-279)||(20983485-20983525)
chr8 (233-296)||(38550618-38550681)
chr8 (233-266)||(21977839-21977872)
chr8 (233-274)||(38550705-38550746)
chr8 (239-279)||(20983551-20983591)
[»] chr7 (59 HSPs)
chr7 (233-305)||(31994-32067)
chr7 (233-305)||(12713809-12713882)
chr7 (233-305)||(12717633-12717706)
chr7 (233-305)||(12722544-12722617)
chr7 (233-286)||(2833200-2833253)
chr7 (233-286)||(18278264-18278317)
chr7 (233-286)||(18282227-18282280)
chr7 (1-48)||(31798-31845)
chr7 (1-48)||(12706081-12706128)
chr7 (1-48)||(12713613-12713660)
chr7 (1-48)||(12717360-12717407)
chr7 (1-48)||(12722271-12722318)
chr7 (1-48)||(16908468-16908515)
chr7 (249-305)||(18278344-18278401)
chr7 (233-307)||(45171207-45171285)
chr7 (5-48)||(18278071-18278114)
chr7 (1-48)||(18282031-18282078)
chr7 (6-48)||(72341-72383)
chr7 (6-48)||(76450-76492)
chr7 (233-286)||(2531050-2531104)
chr7 (248-305)||(18282306-18282364)
chr7 (233-286)||(26291374-26291428)
chr7 (1-46)||(2833442-2833487)
chr7 (1-46)||(15083299-15083344)
chr7 (250-305)||(71970-72026)
chr7 (250-305)||(76079-76135)
chr7 (242-305)||(12705815-12705879)
chr7 (1-49)||(25928330-25928377)
chr7 (4-46)||(2531293-2531335)
chr7 (1-46)||(7520176-7520221)
chr7 (248-285)||(18282274-18282311)
chr7 (1-49)||(20486815-20486861)
chr7 (1-46)||(39721269-39721314)
chr7 (6-46)||(45171472-45171512)
chr7 (1-50)||(18301424-18301471)
chr7 (1-49)||(10607280-10607326)
chr7 (1-49)||(16582494-16582540)
chr7 (248-285)||(18278311-18278348)
chr7 (239-279)||(6170760-6170800)
chr7 (233-292)||(15112352-15112412)
chr7 (233-292)||(15115924-15115984)
chr7 (241-277)||(18424601-18424637)
chr7 (241-277)||(18424714-18424750)
chr7 (233-281)||(25928194-25928242)
chr7 (2-50)||(1859979-1860026)
chr7 (233-279)||(6170826-6170872)
chr7 (233-279)||(9390377-9390423)
chr7 (1-50)||(9752466-9752513)
chr7 (2-50)||(13919370-13919417)
chr7 (233-286)||(16582665-16582719)
chr7 (248-281)||(2833173-2833206)
chr7 (233-274)||(8467864-8467905)
chr7 (233-274)||(10502048-10502089)
chr7 (241-278)||(10607142-10607179)
chr7 (233-274)||(14270754-14270795)
chr7 (233-274)||(17231859-17231900)
chr7 (233-274)||(17231924-17231965)
chr7 (233-274)||(17231989-17232030)
chr7 (233-274)||(17232054-17232095)
[»] chr6 (38 HSPs)
chr6 (233-305)||(8242759-8242832)
chr6 (233-305)||(11565747-11565820)
chr6 (233-305)||(12619990-12620063)
chr6 (233-305)||(23988845-23988918)
chr6 (233-304)||(22948002-22948074)
chr6 (233-304)||(22951958-22952030)
chr6 (233-304)||(23870446-23870518)
chr6 (233-304)||(23874402-23874474)
chr6 (1-48)||(8242485-8242532)
chr6 (1-48)||(11565474-11565521)
chr6 (1-48)||(12620292-12620339)
chr6 (1-48)||(22861828-22861875)
chr6 (1-48)||(23988376-23988423)
chr6 (233-307)||(19869481-19869559)
chr6 (233-307)||(23393935-23394013)
chr6 (233-307)||(23413843-23413921)
chr6 (233-286)||(1643552-1643606)
chr6 (242-307)||(14471234-14471300)
chr6 (6-48)||(22947734-22947776)
chr6 (6-48)||(22951690-22951732)
chr6 (6-48)||(23870178-23870220)
chr6 (6-48)||(23874134-23874176)
chr6 (233-281)||(22075110-22075158)
chr6 (1-46)||(22075347-22075392)
chr6 (1-49)||(11716898-11716946)
chr6 (250-305)||(16759139-16759195)
chr6 (6-48)||(16758782-16758824)
chr6 (233-286)||(18918416-18918469)
chr6 (1-49)||(2076359-2076405)
chr6 (1-46)||(27555612-27555657)
chr6 (6-46)||(19869254-19869294)
chr6 (6-46)||(23393708-23393748)
chr6 (6-46)||(23413616-23413656)
chr6 (1-50)||(1643325-1643372)
chr6 (1-50)||(18918539-18918586)
chr6 (239-281)||(22075077-22075119)
chr6 (241-277)||(16623154-16623190)
chr6 (233-261)||(18953242-18953270)
[»] chr4 (36 HSPs)
chr4 (233-305)||(4562433-4562506)
chr4 (233-305)||(9555415-9555488)
chr4 (233-305)||(14758574-14758647)
chr4 (233-305)||(14955339-14955412)
chr4 (233-305)||(33741185-33741258)
chr4 (233-304)||(25688788-25688860)
chr4 (233-305)||(5757958-5758031)
chr4 (1-48)||(9555142-9555189)
chr4 (1-48)||(14758950-14758997)
chr4 (1-48)||(14955718-14955765)
chr4 (1-48)||(17807127-17807174)
chr4 (1-48)||(25688515-25688562)
chr4 (233-307)||(12486537-12486615)
chr4 (1-48)||(4562732-4562779)
chr4 (1-48)||(5758414-5758461)
chr4 (1-48)||(33740909-33740956)
chr4 (1-46)||(10711898-10711943)
chr4 (1-46)||(10925668-10925713)
chr4 (1-46)||(20158408-20158453)
chr4 (9-48)||(12486349-12486388)
chr4 (1-50)||(23996925-23996972)
chr4 (233-286)||(27532942-27532995)
chr4 (1-49)||(12423016-12423062)
chr4 (1-49)||(17052405-17052451)
chr4 (1-46)||(20161084-20161129)
chr4 (1-46)||(20163859-20163904)
chr4 (233-307)||(631561-631636)
chr4 (1-50)||(631706-631753)
chr4 (233-279)||(15189737-15189783)
chr4 (233-279)||(15189770-15189816)
chr4 (1-50)||(22634885-22634932)
chr4 (1-50)||(27532825-27532872)
chr4 (241-277)||(15223912-15223948)
chr4 (234-279)||(12423189-12423234)
chr4 (233-274)||(15481998-15482039)
chr4 (233-274)||(19857007-19857048)
[»] chr2 (22 HSPs)
chr2 (233-305)||(10102956-10103029)
chr2 (233-305)||(24629627-24629700)
chr2 (233-305)||(27600717-27600790)
chr2 (233-305)||(30346163-30346236)
chr2 (233-305)||(27384546-27384619)
chr2 (235-305)||(27380500-27380571)
chr2 (1-48)||(10103255-10103302)
chr2 (1-48)||(12902565-12902612)
chr2 (1-48)||(24630006-24630053)
chr2 (1-48)||(24645224-24645271)
chr2 (1-48)||(24648000-24648047)
chr2 (1-48)||(27600444-27600491)
chr2 (1-48)||(30346616-30346663)
chr2 (233-286)||(31344221-31344274)
chr2 (233-307)||(41532149-41532227)
chr2 (1-48)||(27380952-27380999)
chr2 (1-48)||(27384922-27384969)
chr2 (1-46)||(31343990-31344035)
chr2 (233-307)||(1282318-1282396)
chr2 (242-305)||(24648249-24648313)
chr2 (6-46)||(41532414-41532454)
chr2 (1-49)||(9784067-9784113)
[»] chr1 (30 HSPs)
chr1 (233-305)||(1009608-1009681)
chr1 (233-305)||(1926301-1926374)
chr1 (233-305)||(16376552-16376625)
chr1 (233-305)||(20925315-20925388)
chr1 (233-305)||(52634694-52634767)
chr1 (233-286)||(33796291-33796344)
chr1 (1-48)||(1009335-1009382)
chr1 (1-48)||(1926754-1926801)
chr1 (1-48)||(16376774-16376821)
chr1 (1-48)||(20925768-20925815)
chr1 (233-287)||(21406553-21406608)
chr1 (241-307)||(33796436-33796503)
chr1 (1-48)||(52634341-52634388)
chr1 (233-286)||(20229941-20229995)
chr1 (1-46)||(33796106-33796151)
chr1 (1-49)||(22132058-22132104)
chr1 (1-50)||(21406326-21406373)
chr1 (233-279)||(28195107-28195153)
chr1 (233-279)||(35982340-35982386)
chr1 (233-274)||(21740484-21740525)
chr1 (1-49)||(41801238-41801284)
chr1 (233-292)||(12271028-12271088)
chr1 (241-277)||(39244891-39244927)
chr1 (241-277)||(39248446-39248482)
chr1 (241-277)||(41389339-41389375)
chr1 (233-281)||(41801091-41801139)
chr1 (233-274)||(20315609-20315650)
chr1 (233-274)||(41306242-41306283)
chr1 (239-279)||(21740349-21740389)
chr1 (233-281)||(41801124-41801171)
[»] scaffold0525 (1 HSPs)
scaffold0525 (233-305)||(5006-5079)
[»] scaffold0166 (2 HSPs)
scaffold0166 (233-286)||(10734-10787)
scaffold0166 (1-39)||(11027-11065)
[»] scaffold0029 (4 HSPs)
scaffold0029 (233-286)||(79428-79481)
scaffold0029 (248-307)||(79475-79535)
scaffold0029 (233-286)||(62568-62621)
scaffold0029 (233-286)||(66484-66537)
[»] scaffold0327 (3 HSPs)
scaffold0327 (233-281)||(19128-19176)
scaffold0327 (233-281)||(19232-19280)
scaffold0327 (4-49)||(18899-18942)
[»] scaffold0200 (3 HSPs)
scaffold0200 (233-281)||(11061-11109)
scaffold0200 (6-46)||(10834-10874)
scaffold0200 (233-286)||(11094-11148)
[»] scaffold0061 (2 HSPs)
scaffold0061 (242-305)||(68328-68392)
scaffold0061 (1-48)||(68514-68561)
[»] scaffold0380 (3 HSPs)
scaffold0380 (233-286)||(955-1009)
scaffold0380 (1-50)||(4047-4094)
scaffold0380 (7-50)||(1-42)
[»] scaffold0157 (2 HSPs)
scaffold0157 (233-307)||(33862-33940)
scaffold0157 (9-48)||(34089-34128)
[»] scaffold0141 (2 HSPs)
scaffold0141 (233-307)||(15281-15359)
scaffold0141 (6-46)||(15546-15586)
[»] scaffold0410 (1 HSPs)
scaffold0410 (1-46)||(14917-14962)
[»] scaffold0293 (2 HSPs)
scaffold0293 (1-49)||(21298-21345)
scaffold0293 (233-281)||(21162-21210)
[»] scaffold0028 (1 HSPs)
scaffold0028 (1-48)||(60283-60331)
[»] scaffold1852 (1 HSPs)
scaffold1852 (5-46)||(781-822)
[»] scaffold0575 (2 HSPs)
scaffold0575 (1-49)||(6920-6966)
scaffold0575 (233-281)||(6842-6889)
[»] scaffold0023 (1 HSPs)
scaffold0023 (1-46)||(11850-11895)
[»] scaffold0486 (2 HSPs)
scaffold0486 (233-281)||(8885-8933)
scaffold0486 (1-46)||(8650-8695)
[»] scaffold0484 (1 HSPs)
scaffold0484 (250-307)||(76-134)
[»] scaffold0124 (2 HSPs)
scaffold0124 (1-50)||(25526-25573)
scaffold0124 (234-279)||(25446-25491)
[»] scaffold0142 (2 HSPs)
scaffold0142 (1-49)||(8699-8745)
scaffold0142 (248-302)||(8445-8500)
[»] scaffold0601 (2 HSPs)
scaffold0601 (241-279)||(8555-8593)
scaffold0601 (233-279)||(8621-8667)
[»] scaffold0278 (1 HSPs)
scaffold0278 (233-274)||(6963-7004)
[»] scaffold0116 (2 HSPs)
scaffold0116 (233-274)||(44439-44480)
scaffold0116 (233-274)||(44504-44545)
[»] scaffold0043 (1 HSPs)
scaffold0043 (233-274)||(9072-9113)
[»] scaffold0013 (1 HSPs)
scaffold0013 (247-286)||(74077-74117)
[»] scaffold0004 (1 HSPs)
scaffold0004 (239-279)||(362226-362266)


Alignment Details
Target: scaffold0372 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0372
Description:

Target: scaffold0372; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 234 - 305
Target Start/End: Complemental strand, 6239 - 6167
Alignment:
Q  234 catcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacacca 305  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  6239 catcttcttatattaatataacaacaacgtattcatcatcttatgaaaatataatcaacacatactaacacca 6167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0372; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 6326 - 6279
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatcatc 48  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||    
T  6326 atgtaatcatcatcgctaataactttaaaacaacacaatataatcatc 6279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 64; Significance: 6e-28; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 233 - 307
Target Start/End: Complemental strand, 19473905 - 19473830
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacaccata 307  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  19473905 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaacacatactaacaccata 19473830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 233 - 305
Target Start/End: Original strand, 20294786 - 20294859
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacacca 305  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  20294786 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaacacatactaacacca 20294859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 233 - 286
Target Start/End: Original strand, 18355055 - 18355108
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatcttataaaatataa 286  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18355055 tcatcttcttatattaatataacaacaacgtattcatcatcttataaaatataa 18355108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 242 - 307
Target Start/End: Original strand, 11226427 - 11226493
Alignment:
Q  242 tatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacaccata 307  Q
    |||| ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||    
T  11226427 tataataatataacaacaacatattcatcatcttatcaaaatataatcaacacatactaacaccata 11226493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 233 - 286
Target Start/End: Complemental strand, 24768290 - 24768237
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatcttataaaatataa 286  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  24768290 tcatcttcttatattaatataacaacaacgtattcatcatcttataaagtataa 24768237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 19474178 - 19474131
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatcatc 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  19474178 atgtaatcatcatcactaataactttaaaacaacacaatataatcatc 19474131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 20294587 - 20294634
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatcatc 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  20294587 atgtaatcatcatcactaataactttaaaacaacacaatataatcatc 20294634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 233 - 307
Target Start/End: Original strand, 11219849 - 11219927
Alignment:
Q  233 tcatcttcttatattaatataaca---acaacgtattcatcatcttat-aaaatataatcaacacatactaacaccata 307  Q
    |||||||| |||| ||||||||||   ||||| ||||||||||||||| ||||||||||||||||||||||||||||||    
T  11219849 tcatcttcatataataatataacagcaacaacatattcatcatcttatcaaaatataatcaacacatactaacaccata 11219927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 233 - 307
Target Start/End: Original strand, 11224435 - 11224513
Alignment:
Q  233 tcatcttcttatattaatataaca---acaacgtattcatcatcttat-aaaatataatcaacacatactaacaccata 307  Q
    |||||||| |||| ||||||||||   ||||| ||||||||||||||| ||||||||||||||||||||||||||||||    
T  11224435 tcatcttcatataataatataacagcaacaacatattcatcatcttatcaaaatataatcaacacatactaacaccata 11224513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 233 - 307
Target Start/End: Original strand, 11230247 - 11230325
Alignment:
Q  233 tcatcttcttatattaatataaca---acaacgtattcatcatcttat-aaaatataatcaacacatactaacaccata 307  Q
    |||||||| |||| ||||||||||   ||||| ||||||||||||||| ||||||||||||||||||||||||||||||    
T  11230247 tcatcttcatataataatataacagcaacaacatattcatcatcttatcaaaatataatcaacacatactaacaccata 11230325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 253 - 307
Target Start/End: Original strand, 18355179 - 18355234
Alignment:
Q  253 aacaacaacgtattcatcatcttataaaa-tataatcaacacatactaacaccata 307  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||    
T  18355179 aacaacaacatattcatcatcttataaaaatataatcaacacatactaacaccata 18355234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 18354870 - 18354915
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatca 46  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||    
T  18354870 atgtaatcatcatcactaataactttaaaacaacacaatgtaatca 18354915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 253 - 305
Target Start/End: Complemental strand, 40727122 - 40727069
Alignment:
Q  253 aacaacaacgtattcatcatcttataaaa-tataatcaacacatactaacacca 305  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  40727122 aacaacaacatattcatcatcttataaaaatataatcaacacatactaacacca 40727069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 233 - 301
Target Start/End: Original strand, 11228257 - 11228329
Alignment:
Q  233 tcatcttcttatattaatataaca---acaacgtattcatcatcttat-aaaatataatcaacacatactaac 301  Q
    |||||||| |||| ||||||||||   ||||| ||||||||||||||| ||||||||||||||||||||||||    
T  11228257 tcatcttcatataataatataacagcaacaacatattcatcatcttatcaaaatataatcaacacatactaac 11228329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 24768568 - 24768530
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaat 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  24768568 atgtaatcatcatcactaataactttaaaacaacacaat 24768530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 6 - 46
Target Start/End: Original strand, 11219622 - 11219662
Alignment:
Q  6 atcatcatcactaataactttaaaacaacacaatataatca 46  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  11219622 atcatcatcactaataactttaaaacaacacaatgtaatca 11219662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 6 - 46
Target Start/End: Original strand, 11224208 - 11224248
Alignment:
Q  6 atcatcatcactaataactttaaaacaacacaatataatca 46  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  11224208 atcatcatcactaataactttaaaacaacacaatgtaatca 11224248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 6 - 46
Target Start/End: Original strand, 11226224 - 11226264
Alignment:
Q  6 atcatcatcactaataactttaaaacaacacaatataatca 46  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  11226224 atcatcatcactaataactttaaaacaacacaatgtaatca 11226264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 6 - 46
Target Start/End: Original strand, 11228030 - 11228070
Alignment:
Q  6 atcatcatcactaataactttaaaacaacacaatataatca 46  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  11228030 atcatcatcactaataactttaaaacaacacaatgtaatca 11228070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 6 - 46
Target Start/End: Original strand, 11230020 - 11230060
Alignment:
Q  6 atcatcatcactaataactttaaaacaacacaatataatca 46  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  11230020 atcatcatcactaataactttaaaacaacacaatgtaatca 11230060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 15238123 - 15238076
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatcatcac 50  Q
    |||||||||||||||||||||||||  |||| ||||||||||||||||||    
T  15238123 atgtaatcatcatcactaataactt--aaactacacaatataatcatcac 15238076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 20912258 - 20912211
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatcatcac 50  Q
    |||||||||||||||||||||||||  |||||| ||||||||||||||||    
T  20912258 atgtaatcatcatcactaataactt--aaacaatacaatataatcatcac 20912211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 40727405 - 40727358
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatcatcac 50  Q
    |||||||||||||||||||||||||  |||| ||||||||||||||||||    
T  40727405 atgtaatcatcatcactaataactt--aaactacacaatataatcatcac 40727358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 22108455 - 22108409
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatcatca 49  Q
    |||||||||||||||||||||||||  ||||||||||||| ||||||||    
T  22108455 atgtaatcatcatcactaataactt--aaacaacacaatagaatcatca 22108409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 273
Target Start/End: Complemental strand, 20912144 - 20912104
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatc 273  Q
    ||||||||||||||||||||||||||||  |||||||||||    
T  20912144 tcatcttcttatattaatataacaacaatatattcatcatc 20912104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 281
Target Start/End: Complemental strand, 22108236 - 22108196
Alignment:
Q  241 ttatattaatataacaacaacgtattcatcatcttataaaa 281  Q
    ||||| ||||||||||||||| |||||||||||||||||||    
T  22108236 ttataataatataacaacaacatattcatcatcttataaaa 22108196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 233 - 279
Target Start/End: Complemental strand, 5889863 - 5889817
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatcttataa 279  Q
    ||||| ||||||| ||||||||||||| | |||||||||||||||||    
T  5889863 tcatcatcttataataatataacaacatcatattcatcatcttataa 5889817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 286
Target Start/End: Complemental strand, 22120381 - 22120335
Alignment:
Q  241 ttatattaatataacaacaacgtattcatcatcttata-aaatataa 286  Q
    ||||| ||||||||||||||| |||||||||||||||| ||||||||    
T  22120381 ttataataatataacaacaacatattcatcatcttatagaaatataa 22120335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 247 - 279
Target Start/End: Complemental strand, 5889918 - 5889886
Alignment:
Q  247 taatataacaacaacgtattcatcatcttataa 279  Q
    ||||||||||||||| |||||||||||||||||    
T  5889918 taatataacaacaacatattcatcatcttataa 5889886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 278
Target Start/End: Complemental strand, 20912176 - 20912132
Alignment:
Q  234 catcttcttatattaatataacaacaacgtattcatcatcttata 278  Q
    |||| ||||||| ||||||||||||||| |||||||| |||||||    
T  20912176 catcatcttataataatataacaacaacatattcatcttcttata 20912132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 64; Significance: 6e-28; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 233 - 307
Target Start/End: Original strand, 11069036 - 11069111
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacaccata 307  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  11069036 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaacacatactaacaccata 11069111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 233 - 305
Target Start/End: Original strand, 7108584 - 7108657
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacacca 305  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  7108584 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaacacatactaacacca 7108657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 233 - 305
Target Start/End: Original strand, 7112519 - 7112592
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacacca 305  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  7112519 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaacacatactaacacca 7112592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 233 - 305
Target Start/End: Original strand, 14498293 - 14498366
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacacca 305  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  14498293 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaacacatactaacacca 14498366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 233 - 305
Target Start/End: Original strand, 15616523 - 15616596
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacacca 305  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  15616523 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaacacatactaacacca 15616596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 233 - 305
Target Start/End: Original strand, 22320552 - 22320625
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacacca 305  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  22320552 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaacacatactaacacca 22320625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 233 - 305
Target Start/End: Original strand, 22335607 - 22335680
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacacca 305  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  22335607 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaacacatactaacacca 22335680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 233 - 305
Target Start/End: Original strand, 28948730 - 28948803
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacacca 305  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  28948730 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaacacatactaacacca 28948803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 233 - 305
Target Start/End: Original strand, 30064735 - 30064808
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacacca 305  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  30064735 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaacacatactaacacca 30064808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 233 - 305
Target Start/End: Original strand, 55021873 - 55021946
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacacca 305  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  55021873 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaacacatactaacacca 55021946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 233 - 305
Target Start/End: Complemental strand, 11166749 - 11166676
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacacca 305  Q
    ||||| |||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  11166749 tcatcctcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaacacatactaacacca 11166676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 233 - 307
Target Start/End: Complemental strand, 14067747 - 14067672
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatcttata-aaatataatcaacacatactaacaccata 307  Q
    ||||| |||||||  ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  14067747 tcatcatcttataaaaatataacaacaacgtattcatcatcttatataaatataatcaacacatactgacaccata 14067672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 233 - 281
Target Start/End: Complemental strand, 11301437 - 11301389
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatcttataaaa 281  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  11301437 tcatcttcttatattaatataacaacaacgtattcatcatcttataaaa 11301389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 7108311 - 7108358
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatcatc 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  7108311 atgtaatcatcatcactaataactttaaaacaacacaatataatcatc 7108358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 7112246 - 7112293
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatcatc 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  7112246 atgtaatcatcatcactaataactttaaaacaacacaatataatcatc 7112293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 11068686 - 11068733
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatcatc 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  11068686 atgtaatcatcatcactaataactttaaaacaacacaatataatcatc 11068733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 11167099 - 11167052
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatcatc 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  11167099 atgtaatcatcatcactaataactttaaaacaacacaatataatcatc 11167052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 22320202 - 22320249
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatcatc 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  22320202 atgtaatcatcatcactaataactttaaaacaacacaatataatcatc 22320249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 22335257 - 22335304
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatcatc 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  22335257 atgtaatcatcatcactaataactttaaaacaacacaatataatcatc 22335304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 28948534 - 28948581
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatcatc 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  28948534 atgtaatcatcatcactaataactttaaaacaacacaatataatcatc 28948581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 55021449 - 55021496
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatcatc 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  55021449 atgtaatcatcatcactaataactttaaaacaacacaatataatcatc 55021496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 233 - 281
Target Start/End: Original strand, 14664735 - 14664783
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatcttataaaa 281  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  14664735 tcatcttcttatattaatataacaaaaacgtattcatcatcttataaaa 14664783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 233 - 281
Target Start/End: Original strand, 14667899 - 14667947
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatcttataaaa 281  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||    
T  14667899 tcatcttcttatattaatataacaacaacatattcatcatcttataaaa 14667947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 233 - 307
Target Start/End: Original strand, 15963791 - 15963869
Alignment:
Q  233 tcatcttcttatattaatataacaacaacg---tattcatcatcttat-aaaatataatcaacacatactaacaccata 307  Q
    |||||||| |||| |||||||||||||||    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  15963791 tcatcttcatataataatataacaacaacaacatattcatcatcttatcaaaatataatcaacacatactaacaccata 15963869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 233 - 307
Target Start/End: Original strand, 15967715 - 15967793
Alignment:
Q  233 tcatcttcttatattaatataacaacaacg---tattcatcatcttat-aaaatataatcaacacatactaacaccata 307  Q
    |||||||| |||| |||||||||||||||    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  15967715 tcatcttcatataataatataacaacaacaacatattcatcatcttatcaaaatataatcaacacatactaacaccata 15967793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 233 - 307
Target Start/End: Original strand, 15971639 - 15971717
Alignment:
Q  233 tcatcttcttatattaatataacaacaacg---tattcatcatcttat-aaaatataatcaacacatactaacaccata 307  Q
    |||||||| |||| |||||||||||||||    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  15971639 tcatcttcatataataatataacaacaacaacatattcatcatcttatcaaaatataatcaacacatactaacaccata 15971717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 14498020 - 14498067
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatcatc 48  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||    
T  14498020 atgtaatcatcatcgctaataactttaaaacaacacaatataatcatc 14498067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 15616250 - 15616297
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatcatc 48  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||    
T  15616250 atgtaatcatcatcactaataactttaaaacaacacattataatcatc 15616297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 48
Target Start/End: Complemental strand, 4112649 - 4112607
Alignment:
Q  6 atcatcatcactaataactttaaaacaacacaatataatcatc 48  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  4112649 atcatcatcactaataactttaaaacaacacaatataatcatc 4112607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 6 - 47
Target Start/End: Complemental strand, 4108800 - 4108759
Alignment:
Q  6 atcatcatcactaataactttaaaacaacacaatataatcat 47  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  4108800 atcatcatcactaataactttaaaacaacacaatataatcat 4108759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 5219920 - 5219965
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatca 46  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||    
T  5219920 atgtaatcatcatcactaataactttaaaacaacacaatgtaatca 5219965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 11853779 - 11853824
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatca 46  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||    
T  11853779 atgtaatcatcatcactaataactttaaaacaacacaatgtaatca 11853824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 14664498 - 14664543
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatca 46  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||    
T  14664498 atgtaatcatcatcactaataactttaaaacaacacaatgtaatca 14664543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 14667662 - 14667707
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatca 46  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||    
T  14667662 atgtaatcatcatcactaataactttaaaacaacacaatgtaatca 14667707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 37440686 - 37440641
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatca 46  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||    
T  37440686 atgtaatcatcatcactaataactttaaaacaacacaatgtaatca 37440641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 250 - 305
Target Start/End: Complemental strand, 4108443 - 4108387
Alignment:
Q  250 tataacaacaacgtattcatcatcttataaaa-tataatcaacacatactaacacca 305  Q
    ||||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  4108443 tataataacaacatattcatcatcttataaaaatataatcaacacatactaacacca 4108387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 250 - 305
Target Start/End: Complemental strand, 4112295 - 4112239
Alignment:
Q  250 tataacaacaacgtattcatcatcttataaaa-tataatcaacacatactaacacca 305  Q
    ||||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  4112295 tataataacaacatattcatcatcttataaaaatataatcaacacatactaacacca 4112239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 46
Target Start/End: Complemental strand, 11301667 - 11301626
Alignment:
Q  5 aatcatcatcactaataactttaaaacaacacaatataatca 46  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  11301667 aatcatcatcactaataactttaaaacaacacaatgtaatca 11301626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 16795576 - 16795622
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatcatca 49  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||    
T  16795576 atgtaatcatcatcactaataactt--aaacaacacaatataatcatca 16795622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 233 - 277
Target Start/End: Complemental strand, 4589936 - 4589893
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatcttat 277  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  4589936 tcatcttcttatatta-tataacaacaacgtattcatcatcttat 4589893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 6 - 46
Target Start/End: Original strand, 15963564 - 15963604
Alignment:
Q  6 atcatcatcactaataactttaaaacaacacaatataatca 46  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  15963564 atcatcatcactaataactttaaaacaacacaatgtaatca 15963604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 6 - 46
Target Start/End: Original strand, 15967488 - 15967528
Alignment:
Q  6 atcatcatcactaataactttaaaacaacacaatataatca 46  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  15967488 atcatcatcactaataactttaaaacaacacaatgtaatca 15967528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 6 - 46
Target Start/End: Original strand, 15971412 - 15971452
Alignment:
Q  6 atcatcatcactaataactttaaaacaacacaatataatca 46  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  15971412 atcatcatcactaataactttaaaacaacacaatgtaatca 15971452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 233 - 281
Target Start/End: Complemental strand, 14067777 - 14067732
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatcttataaaa 281  Q
    |||||||||||||||||||   |||||||||||||||||||||||||||    
T  14067777 tcatcttcttatattaata---caacaacgtattcatcatcttataaaa 14067732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 14068068 - 14068021
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatcatcac 50  Q
    |||||||||||||||||||||||||  |||| ||||||||||||||||||    
T  14068068 atgtaatcatcatcactaataactt--aaactacacaatataatcatcac 14068021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 233 - 279
Target Start/End: Complemental strand, 18440629 - 18440583
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatcttataa 279  Q
    ||||| ||||||| ||||||||||||||| |||||||||||||||||    
T  18440629 tcatcatcttataataatataacaacaacatattcatcatcttataa 18440583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 233 - 279
Target Start/End: Complemental strand, 19485703 - 19485657
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatcttataa 279  Q
    ||||| ||||||| ||||||||||||||| |||||||||||||||||    
T  19485703 tcatcatcttataataatataacaacaacatattcatcatcttataa 19485657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 233 - 279
Target Start/End: Complemental strand, 49390374 - 49390328
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatcttataa 279  Q
    ||||| ||||||| ||||||||||||||| |||||||||||||||||    
T  49390374 tcatcatcttataataatataacaacaacatattcatcatcttataa 49390328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 277
Target Start/End: Complemental strand, 16751616 - 16751580
Alignment:
Q  241 ttatattaatataacaacaacgtattcatcatcttat 277  Q
    ||||| |||||||||||||||||||||||||||||||    
T  16751616 ttataataatataacaacaacgtattcatcatcttat 16751580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 277
Target Start/End: Original strand, 19774548 - 19774584
Alignment:
Q  241 ttatattaatataacaacaacgtattcatcatcttat 277  Q
    ||||| |||||||||||||||||||||||||||||||    
T  19774548 ttataataatataacaacaacgtattcatcatcttat 19774584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 12853369 - 12853325
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatcat 47  Q
    |||||||||||||||||||||| ||  ||||||||||||||||||||    
T  12853369 atgtaatcatcatcactaataaatt--aaacaacacaatataatcat 12853325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 4590166 - 4590119
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatcatcac 50  Q
    |||||||||||||||||||||||||  |||| ||||||||||||| ||||    
T  4590166 atgtaatcatcatcactaataactt--aaactacacaatataatcgtcac 4590119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 15463952 - 15463999
Alignment:
Q  2 tgtaatcatca-tcactaataactttaaaacaacacaatataatcatcac 50  Q
    ||||||||||| |||||||||||||  |||||||||||||||||||||||    
T  15463952 tgtaatcatcaatcactaataactt--aaacaacacaatataatcatcac 15463999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 17318515 - 17318468
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatcatcac 50  Q
    ||||| |||||||||||||||||||  |||| ||||||||||||||||||    
T  17318515 atgtattcatcatcactaataactt--aaactacacaatataatcatcac 17318468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 233 - 279
Target Start/End: Complemental strand, 18440551 - 18440505
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatcttataa 279  Q
    ||||| ||||||| ||||||| ||||||| |||||||||||||||||    
T  18440551 tcatcatcttataataatatagcaacaacatattcatcatcttataa 18440505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 233 - 279
Target Start/End: Complemental strand, 19485625 - 19485579
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatcttataa 279  Q
    ||||| ||||||| ||||||| ||||||| |||||||||||||||||    
T  19485625 tcatcatcttataataatatagcaacaacatattcatcatcttataa 19485579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 14670104 - 14670142
Alignment:
Q  9 atcatcactaataactttaaaacaacacaatataatcatca 49  Q
    |||||||||||||||||  ||||||||||||||||||||||    
T  14670104 atcatcactaataactt--aaacaacacaatataatcatca 14670142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 14681626 - 14681664
Alignment:
Q  9 atcatcactaataactttaaaacaacacaatataatcatca 49  Q
    |||||||||||||||||  ||||||||||||||||||||||    
T  14681626 atcatcactaataactt--aaacaacacaatataatcatca 14681664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 8490395 - 8490350
Alignment:
Q  3 gtaatcatcatcactaataactttaaaacaacacaatataatcatcac 50  Q
    ||||||| |||||||||||||||  |||| ||||||||||||||||||    
T  8490395 gtaatcaccatcactaataactt--aaactacacaatataatcatcac 8490350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 233 - 261
Target Start/End: Complemental strand, 27410987 - 27410959
Alignment:
Q  233 tcatcttcttatattaatataacaacaac 261  Q
    |||||||||||||||||||||||||||||    
T  27410987 tcatcttcttatattaatataacaacaac 27410959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 62; Significance: 9e-27; HSPs: 2)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 233 - 305
Target Start/End: Original strand, 11402 - 11475
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacacca 305  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  11402 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaacacatactaacacca 11475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 11124 - 11170
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatcatc 48  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||    
T  11124 atgtaatcatcatcactaataactttaaaacaacacaa-ataatcatc 11170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 62; Significance: 9e-27; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 233 - 305
Target Start/End: Original strand, 22110936 - 22111009
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacacca 305  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  22110936 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaacacatactaacacca 22111009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 233 - 305
Target Start/End: Original strand, 43250696 - 43250769
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacacca 305  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  43250696 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaacacatactaacacca 43250769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 233 - 305
Target Start/End: Complemental strand, 21973762 - 21973689
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacacca 305  Q
    |||||||||| ||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||    
T  21973762 tcatcttcttgtattaatataacaacaaggtattcatcatcttatgaaaatataatcaacacatactaacacca 21973689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 244 - 305
Target Start/End: Complemental strand, 21977842 - 21977780
Alignment:
Q  244 tattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacacca 305  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  21977842 tattaatataacaacaacgtattcatcatcttatgaaaatataatcaacacatactaacacca 21977780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 21974189 - 21974142
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatcatc 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  21974189 atgtaatcatcatcactaataactttaaaacaacacaatataatcatc 21974142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 21978299 - 21978252
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatcatc 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  21978299 atgtaatcatcatcactaataactttaaaacaacacaatataatcatc 21978252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 233 - 307
Target Start/End: Complemental strand, 18863889 - 18863811
Alignment:
Q  233 tcatcttcttatattaatataacaacaacg---tattcatcatcttat-aaaatataatcaacacatactaacaccata 307  Q
    |||||||| |||| |||||||||||||||    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  18863889 tcatcttcatataataatataacaacaacaacatattcatcatcttatcaaaatataatcaacacatactaacaccata 18863811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 233 - 307
Target Start/End: Complemental strand, 30941349 - 30941271
Alignment:
Q  233 tcatcttcttatattaatataacaacaacg---tattcatcatcttat-aaaatataatcaacacatactaacaccata 307  Q
    |||||||| |||| |||||||||||||||    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  30941349 tcatcttcatataataatataacaacaacaacatattcatcatcttatcaaaatataatcaacacatactaacaccata 30941271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 43250275 - 43250322
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatcatc 48  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  43250275 atgtaatcatcatcattaataactttaaaacaacacaatataatcatc 43250322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 48
Target Start/End: Complemental strand, 21829472 - 21829430
Alignment:
Q  6 atcatcatcactaataactttaaaacaacacaatataatcatc 48  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  21829472 atcatcatcactaataactttaaaacaacacaatataatcatc 21829430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 14399098 - 14399053
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatca 46  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||    
T  14399098 atgtaatcatcatcactaataactttaaaacaacacaatgtaatca 14399053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 21409974 - 21410019
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatca 46  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||    
T  21409974 atgtaatcatcatcactaataactttaaaacaacacaatgtaatca 21410019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 21804466 - 21804511
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatca 46  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||    
T  21804466 atgtaatcatcatcactaataactttaaaacaacacaatgtaatca 21804511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 250 - 305
Target Start/End: Complemental strand, 21829195 - 21829139
Alignment:
Q  250 tataacaacaacgtattcatcatcttataaaa-tataatcaacacatactaacacca 305  Q
    ||||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  21829195 tataataacaacatattcatcatcttataaaaatataatcaacacatactaacacca 21829139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 240 - 286
Target Start/End: Complemental strand, 15924344 - 15924297
Alignment:
Q  240 cttatattaatataacaacaacgtattcatcatcttat-aaaatataa 286  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||    
T  15924344 cttatattaatataacaacaacgtattcatcatcttatgaaaatataa 15924297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 6 - 48
Target Start/End: Original strand, 22110668 - 22110710
Alignment:
Q  6 atcatcatcactaataactttaaaacaacacaatataatcatc 48  Q
    |||||||||||||||||||||||||||||| ||||||||||||    
T  22110668 atcatcatcactaataactttaaaacaacataatataatcatc 22110710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 23913338 - 23913384
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatcatca 49  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||    
T  23913338 atgtaatcatcatcactaataactt--aaacaacacaatataatcatca 23913384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 6 - 46
Target Start/End: Complemental strand, 18864116 - 18864076
Alignment:
Q  6 atcatcatcactaataactttaaaacaacacaatataatca 46  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  18864116 atcatcatcactaataactttaaaacaacacaatgtaatca 18864076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 6 - 46
Target Start/End: Complemental strand, 30941576 - 30941536
Alignment:
Q  6 atcatcatcactaataactttaaaacaacacaatataatca 46  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  30941576 atcatcatcactaataactttaaaacaacacaatgtaatca 30941536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 21386232 - 21386279
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatcatcac 50  Q
    |||||||||||||||||||||||||  |||| ||||||||||||||||||    
T  21386232 atgtaatcatcatcactaataactt--aaactacacaatataatcatcac 21386279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 23427899 - 23427945
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatcatca 49  Q
    |||||||||||||||||||||||||  | ||||||||||||||||||||    
T  23427899 atgtaatcatcatcactaataactt--agacaacacaatataatcatca 23427945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 44385839 - 44385793
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatcatca 49  Q
    ||||||||||||||||||| |||||  ||||||||||||||||||||||    
T  44385839 atgtaatcatcatcactaacaactt--aaacaacacaatataatcatca 44385793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 279
Target Start/End: Complemental strand, 20983525 - 20983485
Alignment:
Q  239 tcttatattaatataacaacaacgtattcatcatcttataa 279  Q
    ||||||| ||||||||||||||| |||||||||||||||||    
T  20983525 tcttataataatataacaacaacatattcatcatcttataa 20983485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 296
Target Start/End: Complemental strand, 38550681 - 38550618
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacata 296  Q
    ||||| ||||||| ||||||||||||||| |||||||||||| || ||||||||| |||||||||    
T  38550681 tcatcatcttataataatataacaacaacatattcatcatctcatcaaaatataa-caacacata 38550618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 266
Target Start/End: Complemental strand, 21977872 - 21977839
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtatt 266  Q
    |||||||||| |||||||||||||||||||||||    
T  21977872 tcatcttcttgtattaatataacaacaacgtatt 21977839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 274
Target Start/End: Complemental strand, 38550746 - 38550705
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatct 274  Q
    ||||| ||||||| ||||||||||||||| ||||||||||||    
T  38550746 tcatcatcttataataatataacaacaacatattcatcatct 38550705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 279
Target Start/End: Complemental strand, 20983591 - 20983551
Alignment:
Q  239 tcttatattaatataacaacaacgtattcatcatcttataa 279  Q
    ||||||| ||||||||| ||||| |||||||||||||||||    
T  20983591 tcttataataatataaccacaacatattcatcatcttataa 20983551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 62; Significance: 9e-27; HSPs: 59)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 233 - 305
Target Start/End: Original strand, 31994 - 32067
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacacca 305  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  31994 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaacacatactaacacca 32067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 233 - 305
Target Start/End: Original strand, 12713809 - 12713882
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacacca 305  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  12713809 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaacacatactaacacca 12713882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 233 - 305
Target Start/End: Original strand, 12717633 - 12717706
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacacca 305  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  12717633 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaacacatactaacacca 12717706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 233 - 305
Target Start/End: Original strand, 12722544 - 12722617
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacacca 305  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  12722544 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaacacatactaacacca 12722617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 233 - 286
Target Start/End: Complemental strand, 2833253 - 2833200
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatcttataaaatataa 286  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  2833253 tcatcttcttataataatataacaacaacgtattcatcatcttataaaatataa 2833200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 233 - 286
Target Start/End: Original strand, 18278264 - 18278317
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatcttataaaatataa 286  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  18278264 tcatcttcttatattaatataacaacaatgtattcatcatcttataaaatataa 18278317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 233 - 286
Target Start/End: Original strand, 18282227 - 18282280
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatcttataaaatataa 286  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  18282227 tcatcttcttatattaatataacaacaatgtattcatcatcttataaaatataa 18282280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 31798 - 31845
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatcatc 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  31798 atgtaatcatcatcactaataactttaaaacaacacaatataatcatc 31845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 12706128 - 12706081
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatcatc 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  12706128 atgtaatcatcatcactaataactttaaaacaacacaatataatcatc 12706081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 12713613 - 12713660
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatcatc 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  12713613 atgtaatcatcatcactaataactttaaaacaacacaatataatcatc 12713660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 12717360 - 12717407
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatcatc 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  12717360 atgtaatcatcatcactaataactttaaaacaacacaatataatcatc 12717407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 12722271 - 12722318
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatcatc 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  12722271 atgtaatcatcatcactaataactttaaaacaacacaatataatcatc 12722318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 16908515 - 16908468
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatcatc 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  16908515 atgtaatcatcatcactaataactttaaaacaacacaatataatcatc 16908468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 249 - 305
Target Start/End: Original strand, 18278344 - 18278401
Alignment:
Q  249 atataacaacaacgtattcatcatcttata-aaatataatcaacacatactaacacca 305  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  18278344 atatagcaacaacgtattcatcatcttatataaatataatcaacacatactaacacca 18278401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 233 - 307
Target Start/End: Complemental strand, 45171285 - 45171207
Alignment:
Q  233 tcatcttcttatattaatataacaacaacg---tattcatcatcttat-aaaatataatcaacacatactaacaccata 307  Q
    |||||||| |||| |||||||||||||||    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  45171285 tcatcttcatataataatataacaacaacaacatattcatcatcttatcaaaatataatcaacacatactaacaccata 45171207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 48
Target Start/End: Original strand, 18278071 - 18278114
Alignment:
Q  5 aatcatcatcactaataactttaaaacaacacaatataatcatc 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  18278071 aatcatcatcactaataactttaaaacaacacaatataatcatc 18278114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 18282031 - 18282078
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatcatc 48  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  18282031 atgtaatcatcatcactaaaaactttaaaacaacacaatataatcatc 18282078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 48
Target Start/End: Complemental strand, 72383 - 72341
Alignment:
Q  6 atcatcatcactaataactttaaaacaacacaatataatcatc 48  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  72383 atcatcatcactaataactttaaaacaacacaatataatcatc 72341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 48
Target Start/End: Complemental strand, 76492 - 76450
Alignment:
Q  6 atcatcatcactaataactttaaaacaacacaatataatcatc 48  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  76492 atcatcatcactaataactttaaaacaacacaatataatcatc 76450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 233 - 286
Target Start/End: Complemental strand, 2531104 - 2531050
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataa 286  Q
    |||||||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  2531104 tcatcttcttatattaatataacaacaacgtaatcatcatcttatgaaaatataa 2531050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 248 - 305
Target Start/End: Original strand, 18282306 - 18282364
Alignment:
Q  248 aatataacaacaacgtattcatcatcttata-aaatataatcaacacatactaacacca 305  Q
    |||||| |||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  18282306 aatatagcaacgacgtattcatcatcttatataaatataatcaacacatactaacacca 18282364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 233 - 286
Target Start/End: Original strand, 26291374 - 26291428
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataa 286  Q
    |||| |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  26291374 tcattttcttatattaatataacaacaacgtattcatcatcttatgaaaatataa 26291428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 2833487 - 2833442
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatca 46  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||    
T  2833487 atgtaatcatcatcactaataactttaaaacaacacaatgtaatca 2833442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 15083299 - 15083344
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatca 46  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||    
T  15083299 atgtaatcatcatcactaataactttaaaacaacacaatgtaatca 15083344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 250 - 305
Target Start/End: Complemental strand, 72026 - 71970
Alignment:
Q  250 tataacaacaacgtattcatcatcttataaaa-tataatcaacacatactaacacca 305  Q
    ||||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  72026 tataataacaacatattcatcatcttataaaaatataatcaacacatactaacacca 71970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 250 - 305
Target Start/End: Complemental strand, 76135 - 76079
Alignment:
Q  250 tataacaacaacgtattcatcatcttataaaa-tataatcaacacatactaacacca 305  Q
    ||||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  76135 tataataacaacatattcatcatcttataaaaatataatcaacacatactaacacca 76079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 242 - 305
Target Start/End: Complemental strand, 12705879 - 12705815
Alignment:
Q  242 tatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacacca 305  Q
    |||| ||||||||||||||| |||||||| | |||| ||||||||||||||||||||||||||||    
T  12705879 tataataatataacaacaacatattcatctttttatgaaaatataatcaacacatactaacacca 12705815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 25928377 - 25928330
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatcatca 49  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  25928377 atgtaatcatcatcactaataacttt-aaacaacacaatataatcatca 25928330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 4 - 46
Target Start/End: Complemental strand, 2531335 - 2531293
Alignment:
Q  4 taatcatcatcactaataactttaaaacaacacaatataatca 46  Q
    |||||||||||||||||||||||||||||||||||| ||||||    
T  2531335 taatcatcatcactaataactttaaaacaacacaatgtaatca 2531293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 7520221 - 7520176
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatca 46  Q
    ||||||||||||||||| ||||||||||||||||||||| ||||||    
T  7520221 atgtaatcatcatcactgataactttaaaacaacacaatgtaatca 7520176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 248 - 285
Target Start/End: Original strand, 18282274 - 18282311
Alignment:
Q  248 aatataacaacaacgtattcatcatcttataaaatata 285  Q
    ||||||||||||||||||||||||||||||||||||||    
T  18282274 aatataacaacaacgtattcatcatcttataaaatata 18282311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 20486815 - 20486861
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatcatca 49  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||    
T  20486815 atgtaatcatcatcactaataactt--aaacaacacaatataatcatca 20486861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 39721269 - 39721314
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatca 46  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||||    
T  39721269 atgtaatcatcattactaataactttaaaacaacacaatgtaatca 39721314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 6 - 46
Target Start/End: Complemental strand, 45171512 - 45171472
Alignment:
Q  6 atcatcatcactaataactttaaaacaacacaatataatca 46  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  45171512 atcatcatcactaataactttaaaacaacacaatgtaatca 45171472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 18301424 - 18301471
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatcatcac 50  Q
    |||||||||||||||||||||||||  |||||||||||||||||| ||||    
T  18301424 atgtaatcatcatcactaataactt--aaacaacacaatataatcgtcac 18301471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 10607326 - 10607280
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatcatca 49  Q
    |||||||||||||||||||||| ||  ||||||||||||||||||||||    
T  10607326 atgtaatcatcatcactaataaatt--aaacaacacaatataatcatca 10607280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 16582494 - 16582540
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatcatca 49  Q
    |||||||||||||||||||||| ||  ||||||||||||||||||||||    
T  16582494 atgtaatcatcatcactaataaatt--aaacaacacaatataatcatca 16582540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 248 - 285
Target Start/End: Original strand, 18278311 - 18278348
Alignment:
Q  248 aatataacaacaacgtattcatcatcttataaaatata 285  Q
    |||||||||||||||||||||||||||||||| |||||    
T  18278311 aatataacaacaacgtattcatcatcttataagatata 18278348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 279
Target Start/End: Complemental strand, 6170800 - 6170760
Alignment:
Q  239 tcttatattaatataacaacaacgtattcatcatcttataa 279  Q
    ||||||| ||||||||||||||| |||||||||||||||||    
T  6170800 tcttataataatataacaacaacatattcatcatcttataa 6170760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 292
Target Start/End: Original strand, 15112352 - 15112412
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatcttataa-aatataatcaaca 292  Q
    ||||| ||| ||| ||||||||||||||| ||||||||||||||||| ||||||| |||||    
T  15112352 tcatcatctcataataatataacaacaacatattcatcatcttataataatataagcaaca 15112412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 292
Target Start/End: Original strand, 15115924 - 15115984
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatcttataa-aatataatcaaca 292  Q
    ||||| ||| ||| ||||||||||||||| ||||||||||||||||| ||||||| |||||    
T  15115924 tcatcatctcataataatataacaacaacatattcatcatcttataataatataagcaaca 15115984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 277
Target Start/End: Original strand, 18424601 - 18424637
Alignment:
Q  241 ttatattaatataacaacaacgtattcatcatcttat 277  Q
    ||||| |||||||||||||||||||||||||||||||    
T  18424601 ttataataatataacaacaacgtattcatcatcttat 18424637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 277
Target Start/End: Original strand, 18424714 - 18424750
Alignment:
Q  241 ttatattaatataacaacaacgtattcatcatcttat 277  Q
    ||||| |||||||||||||||||||||||||||||||    
T  18424714 ttataataatataacaacaacgtattcatcatcttat 18424750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 281
Target Start/End: Complemental strand, 25928242 - 25928194
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatcttataaaa 281  Q
    ||||| |||||||  |||||||||||||| |||||||||||||||||||    
T  25928242 tcatcatcttataaaaatataacaacaacatattcatcatcttataaaa 25928194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 1860026 - 1859979
Alignment:
Q  2 tgtaatcatca-tcactaataactttaaaacaacacaatataatcatcac 50  Q
    ||||||||||| |||||||||||||  |||||||||||||||||||||||    
T  1860026 tgtaatcatcaatcactaataactt--aaacaacacaatataatcatcac 1859979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 233 - 279
Target Start/End: Complemental strand, 6170872 - 6170826
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatcttataa 279  Q
    ||||| ||||||| |||||| |||||||| |||||||||||||||||    
T  6170872 tcatcatcttataataatatgacaacaacatattcatcatcttataa 6170826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 233 - 279
Target Start/End: Complemental strand, 9390423 - 9390377
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatcttataa 279  Q
    ||||| ||||||| ||||||||||||| | |||||||||||||||||    
T  9390423 tcatcatcttataataatataacaacatcatattcatcatcttataa 9390377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 9752513 - 9752466
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatcatcac 50  Q
    ||||||| |||||||||||||||||  |||||||||||||| ||||||||    
T  9752513 atgtaattatcatcactaataactt--aaacaacacaatatgatcatcac 9752466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 13919417 - 13919370
Alignment:
Q  2 tgtaatcatca-tcactaataactttaaaacaacacaatataatcatcac 50  Q
    ||||||||||| |||||||||||||  |||||||||||||||||||||||    
T  13919417 tgtaatcatcaatcactaataactt--aaacaacacaatataatcatcac 13919370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 233 - 286
Target Start/End: Original strand, 16582665 - 16582719
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatcttata-aaatataa 286  Q
    ||||| ||||||| ||||||||||||||| |||||| ||||||||| ||||||||    
T  16582665 tcatcatcttataataatataacaacaacatattcaccatcttatagaaatataa 16582719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 281
Target Start/End: Complemental strand, 2833206 - 2833173
Alignment:
Q  248 aatataacaacaacgtattcatcatcttataaaa 281  Q
    |||||||||||||| |||||||||||||||||||    
T  2833206 aatataacaacaacatattcatcatcttataaaa 2833173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 274
Target Start/End: Original strand, 8467864 - 8467905
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatct 274  Q
    ||||| ||||||| ||||||||||||||| ||||||||||||    
T  8467864 tcatcatcttataataatataacaacaacatattcatcatct 8467905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 274
Target Start/End: Complemental strand, 10502089 - 10502048
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatct 274  Q
    ||||| ||||||||||||||||||||||| ||||| ||||||    
T  10502089 tcatcatcttatattaatataacaacaacatattcctcatct 10502048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 278
Target Start/End: Complemental strand, 10607179 - 10607142
Alignment:
Q  241 ttatattaatataacaacaacgtattcatcatcttata 278  Q
    ||||| ||||||||||||||| ||||||||||||||||    
T  10607179 ttataataatataacaacaacatattcatcatcttata 10607142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 274
Target Start/End: Complemental strand, 14270795 - 14270754
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatct 274  Q
    ||||| ||||||| ||||||||||||||| ||||||||||||    
T  14270795 tcatcatcttataataatataacaacaacatattcatcatct 14270754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 274
Target Start/End: Original strand, 17231859 - 17231900
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatct 274  Q
    ||||| ||||||| ||||||||||||||| ||||||||||||    
T  17231859 tcatcatcttataataatataacaacaacatattcatcatct 17231900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 274
Target Start/End: Original strand, 17231924 - 17231965
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatct 274  Q
    ||||| ||||||| ||||||||||||||| ||||||||||||    
T  17231924 tcatcatcttataataatataacaacaacatattcatcatct 17231965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 274
Target Start/End: Original strand, 17231989 - 17232030
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatct 274  Q
    ||||| ||||||| ||||||||||||||| ||||||||||||    
T  17231989 tcatcatcttataataatataacaacaacatattcatcatct 17232030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 274
Target Start/End: Original strand, 17232054 - 17232095
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatct 274  Q
    ||||| ||||||| ||||||||||||||| ||||||||||||    
T  17232054 tcatcatcttataataatataacaacaacatattcatcatct 17232095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 62; Significance: 9e-27; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 233 - 305
Target Start/End: Original strand, 8242759 - 8242832
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacacca 305  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  8242759 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaacacatactaacacca 8242832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 233 - 305
Target Start/End: Original strand, 11565747 - 11565820
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacacca 305  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  11565747 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaacacatactaacacca 11565820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 233 - 305
Target Start/End: Complemental strand, 12620063 - 12619990
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacacca 305  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  12620063 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaacacatactaacacca 12619990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 233 - 305
Target Start/End: Original strand, 23988845 - 23988918
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacacca 305  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  23988845 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaacacatactaacacca 23988918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 233 - 304
Target Start/End: Original strand, 22948002 - 22948074
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacacc 304  Q
    |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  22948002 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaacacatactaacacc 22948074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 233 - 304
Target Start/End: Original strand, 22951958 - 22952030
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacacc 304  Q
    |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  22951958 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaacacatactaacacc 22952030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 233 - 304
Target Start/End: Original strand, 23870446 - 23870518
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacacc 304  Q
    |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  23870446 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaacacatactaacacc 23870518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 233 - 304
Target Start/End: Original strand, 23874402 - 23874474
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacacc 304  Q
    |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  23874402 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaacacatactaacacc 23874474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 8242485 - 8242532
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatcatc 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  8242485 atgtaatcatcatcactaataactttaaaacaacacaatataatcatc 8242532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 11565474 - 11565521
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatcatc 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  11565474 atgtaatcatcatcactaataactttaaaacaacacaatataatcatc 11565521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 12620339 - 12620292
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatcatc 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  12620339 atgtaatcatcatcactaataactttaaaacaacacaatataatcatc 12620292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 22861828 - 22861875
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatcatc 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  22861828 atgtaatcatcatcactaataactttaaaacaacacaatataatcatc 22861875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 23988376 - 23988423
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatcatc 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  23988376 atgtaatcatcatcactaataactttaaaacaacacaatataatcatc 23988423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 233 - 307
Target Start/End: Original strand, 19869481 - 19869559
Alignment:
Q  233 tcatcttcttatattaatataacaacaacg---tattcatcatcttat-aaaatataatcaacacatactaacaccata 307  Q
    |||||||| |||| |||||||||||||||    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  19869481 tcatcttcatataataatataacaacaacaacatattcatcatcttatcaaaatataatcaacacatactaacaccata 19869559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 233 - 307
Target Start/End: Original strand, 23393935 - 23394013
Alignment:
Q  233 tcatcttcttatattaatataacaacaacg---tattcatcatcttat-aaaatataatcaacacatactaacaccata 307  Q
    |||||||| |||| |||||||||||||||    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  23393935 tcatcttcatataataatataacaacaacaacatattcatcatcttatcaaaatataatcaacacatactaacaccata 23394013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 233 - 307
Target Start/End: Original strand, 23413843 - 23413921
Alignment:
Q  233 tcatcttcttatattaatataacaacaacg---tattcatcatcttat-aaaatataatcaacacatactaacaccata 307  Q
    |||||||| |||| |||||||||||||||    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  23413843 tcatcttcatataataatataacaacaacaacatattcatcatcttatcaaaatataatcaacacatactaacaccata 23413921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 233 - 286
Target Start/End: Original strand, 1643552 - 1643606
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataa 286  Q
    |||||| |||||||||||||||||||||||||||||||||||||| |||||||||    
T  1643552 tcatctccttatattaatataacaacaacgtattcatcatcttatgaaaatataa 1643606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 242 - 307
Target Start/End: Original strand, 14471234 - 14471300
Alignment:
Q  242 tatattaatataacaacaacgtattcatcatcttataa-aatataatcaacacatactaacaccata 307  Q
    |||| ||||||||||||||| |||||||| |||||||  ||||||||||||||||||||||||||||    
T  14471234 tataataatataacaacaacatattcatcttcttatattaatataatcaacacatactaacaccata 14471300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 48
Target Start/End: Original strand, 22947734 - 22947776
Alignment:
Q  6 atcatcatcactaataactttaaaacaacacaatataatcatc 48  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  22947734 atcatcatcactaataactttaaaacaacacaatataatcatc 22947776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 48
Target Start/End: Original strand, 22951690 - 22951732
Alignment:
Q  6 atcatcatcactaataactttaaaacaacacaatataatcatc 48  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  22951690 atcatcatcactaataactttaaaacaacacaatataatcatc 22951732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 48
Target Start/End: Original strand, 23870178 - 23870220
Alignment:
Q  6 atcatcatcactaataactttaaaacaacacaatataatcatc 48  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  23870178 atcatcatcactaataactttaaaacaacacaatataatcatc 23870220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 48
Target Start/End: Original strand, 23874134 - 23874176
Alignment:
Q  6 atcatcatcactaataactttaaaacaacacaatataatcatc 48  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  23874134 atcatcatcactaataactttaaaacaacacaatataatcatc 23874176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 233 - 281
Target Start/End: Complemental strand, 22075158 - 22075110
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatcttataaaa 281  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  22075158 tcatcttcttatattaatataacaacaacntattaatcatcttataaaa 22075110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 22075392 - 22075347
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatca 46  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||    
T  22075392 atgtaatcatcatcactaataactttaaaacaacacaatgtaatca 22075347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 11716946 - 11716898
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatcatca 49  Q
    ||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  11716946 atgtaatcatcatcattaataactttaaaacaacacaatataaacatca 11716898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 250 - 305
Target Start/End: Original strand, 16759139 - 16759195
Alignment:
Q  250 tataacaacaacgtattcatcatcttataaaa-tataatcaacacatactaacacca 305  Q
    ||||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  16759139 tataataacaacatattcatcatcttataaaaatataatcaacacatactaacacca 16759195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 6 - 48
Target Start/End: Original strand, 16758782 - 16758824
Alignment:
Q  6 atcatcatcactaataactttaaaacaacacaatataatcatc 48  Q
    ||||||||||||||||| |||||||||||||||||||||||||    
T  16758782 atcatcatcactaataaatttaaaacaacacaatataatcatc 16758824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 233 - 286
Target Start/End: Complemental strand, 18918469 - 18918416
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataa 286  Q
    |||||||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  18918469 tcatcttcttatatta-tataacaacaacgtattcatcatcttatgaaaatataa 18918416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 2076359 - 2076405
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatcatca 49  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||    
T  2076359 atgtaatcatcatcactaataactt--aaacaacacaatataatcatca 2076405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 27555612 - 27555657
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatca 46  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||    
T  27555612 atgtaatcatcatcactaataactttaaaacaactcaatgtaatca 27555657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 6 - 46
Target Start/End: Original strand, 19869254 - 19869294
Alignment:
Q  6 atcatcatcactaataactttaaaacaacacaatataatca 46  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  19869254 atcatcatcactaataactttaaaacaacacaatgtaatca 19869294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 6 - 46
Target Start/End: Original strand, 23393708 - 23393748
Alignment:
Q  6 atcatcatcactaataactttaaaacaacacaatataatca 46  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  23393708 atcatcatcactaataactttaaaacaacacaatgtaatca 23393748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 6 - 46
Target Start/End: Original strand, 23413616 - 23413656
Alignment:
Q  6 atcatcatcactaataactttaaaacaacacaatataatca 46  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  23413616 atcatcatcactaataactttaaaacaacacaatgtaatca 23413656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 1643325 - 1643372
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatcatcac 50  Q
    |||||||||||||||||||||||||  |||| ||||||||||||||||||    
T  1643325 atgtaatcatcatcactaataactt--aaactacacaatataatcatcac 1643372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 18918586 - 18918539
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatcatcac 50  Q
    |||||||||||||||||||||||||  |||| | ||||||||||||||||    
T  18918586 atgtaatcatcatcactaataactt--aaactatacaatataatcatcac 18918539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 281
Target Start/End: Complemental strand, 22075119 - 22075077
Alignment:
Q  239 tcttatattaatataacaacaacgtattcatcatcttataaaa 281  Q
    |||||||  |||||||||||||| |||||||||||||||||||    
T  22075119 tcttataaaaatataacaacaacatattcatcatcttataaaa 22075077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 241 - 277
Target Start/End: Original strand, 16623154 - 16623190
Alignment:
Q  241 ttatattaatataacaacaacgtattcatcatcttat 277  Q
    ||||| ||||||||||||||| |||||||||||||||    
T  16623154 ttataataatataacaacaacatattcatcatcttat 16623190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 233 - 261
Target Start/End: Complemental strand, 18953270 - 18953242
Alignment:
Q  233 tcatcttcttatattaatataacaacaac 261  Q
    |||||||||||||||||||||||||||||    
T  18953270 tcatcttcttatattaatataacaacaac 18953242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 62; Significance: 9e-27; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 233 - 305
Target Start/End: Complemental strand, 4562506 - 4562433
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacacca 305  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  4562506 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaacacatactaacacca 4562433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 233 - 305
Target Start/End: Original strand, 9555415 - 9555488
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacacca 305  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  9555415 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaacacatactaacacca 9555488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 233 - 305
Target Start/End: Complemental strand, 14758647 - 14758574
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacacca 305  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  14758647 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaacacatactaacacca 14758574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 233 - 305
Target Start/End: Complemental strand, 14955412 - 14955339
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacacca 305  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  14955412 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaacacatactaacacca 14955339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 233 - 305
Target Start/End: Original strand, 33741185 - 33741258
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacacca 305  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  33741185 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaacacatactaacacca 33741258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 233 - 304
Target Start/End: Original strand, 25688788 - 25688860
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacacc 304  Q
    |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  25688788 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaacacatactaacacc 25688860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 233 - 305
Target Start/End: Complemental strand, 5758031 - 5757958
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacacca 305  Q
    |||||||||| |||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  5758031 tcatcttcttgtattaatataacaacaacatattcatcatcttatgaaaatataatcaacacatactaacacca 5757958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 9555142 - 9555189
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatcatc 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  9555142 atgtaatcatcatcactaataactttaaaacaacacaatataatcatc 9555189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 14758997 - 14758950
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatcatc 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  14758997 atgtaatcatcatcactaataactttaaaacaacacaatataatcatc 14758950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 14955765 - 14955718
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatcatc 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  14955765 atgtaatcatcatcactaataactttaaaacaacacaatataatcatc 14955718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 17807127 - 17807174
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatcatc 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  17807127 atgtaatcatcatcactaataactttaaaacaacacaatataatcatc 17807174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 25688515 - 25688562
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatcatc 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  25688515 atgtaatcatcatcactaataactttaaaacaacacaatataatcatc 25688562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 233 - 307
Target Start/End: Original strand, 12486537 - 12486615
Alignment:
Q  233 tcatcttcttatattaatataacaacaacg---tattcatcatcttat-aaaatataatcaacacatactaacaccata 307  Q
    |||||||| |||| |||||||||||||||    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  12486537 tcatcttcatataataatataacaacaacaacatattcatcatcttatcaaaatataatcaacacatactaacaccata 12486615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 4562779 - 4562732
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatcatc 48  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||    
T  4562779 atgtaatcatcatcactaataactttaaaacaacccaatataatcatc 4562732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 5758461 - 5758414
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatcatc 48  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||    
T  5758461 atgtaatcatcatcactaataactttaaaacaacacaatagaatcatc 5758414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 33740909 - 33740956
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatcatc 48  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||    
T  33740909 atgtaatcatcatcactaataattttaaaacaacacaatataatcatc 33740956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 10711898 - 10711943
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatca 46  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||    
T  10711898 atgtaatcatcatcactaataactttaaaacaacacaatgtaatca 10711943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 10925668 - 10925713
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatca 46  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||    
T  10925668 atgtaatcatcatcactaataactttaaaacaacacaatgtaatca 10925713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 20158453 - 20158408
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatca 46  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||    
T  20158453 atgtaatcatcatcactaataactttaaaacaacacaatgtaatca 20158408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 48
Target Start/End: Original strand, 12486349 - 12486388
Alignment:
Q  9 atcatcactaataactttaaaacaacacaatataatcatc 48  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  12486349 atcatcactaataactttaaaacaacacaatataatcatc 12486388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 23996972 - 23996925
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatcatcac 50  Q
    |||||||||||||||||||||||||  |||||||||||||||||||||||    
T  23996972 atgtaatcatcatcactaataactt--aaacaacacaatataatcatcac 23996925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 233 - 286
Target Start/End: Original strand, 27532942 - 27532995
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataa 286  Q
    |||||||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  27532942 tcatcttcttatatta-tataacaacaacgtattcatcatcttatgaaaatataa 27532995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 12423016 - 12423062
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatcatca 49  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||    
T  12423016 atgtaatcatcatcactaataactt--aaacaacacaatataatcatca 12423062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 17052451 - 17052405
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatcatca 49  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||    
T  17052451 atgtaatcatcatcactaataactt--aaacaacacaatataatcatca 17052405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 20161129 - 20161084
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatca 46  Q
    |||||||| |||||||||||||||||||||||||||||| ||||||    
T  20161129 atgtaatcgtcatcactaataactttaaaacaacacaatgtaatca 20161084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 20163904 - 20163859
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatca 46  Q
    |||||||| |||||||||||||||||||||||||||||| ||||||    
T  20163904 atgtaatcgtcatcactaataactttaaaacaacacaatgtaatca 20163859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 233 - 307
Target Start/End: Complemental strand, 631636 - 631561
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatcttataa-aatataatcaacacatactaacaccata 307  Q
    ||||||| ||||| ||||||||||||||| |||||||||| |||||| ||||||| || |||||| ||||| ||||    
T  631636 tcatctttttataataatataacaacaacatattcatcattttataataatataaacagcacataataacatcata 631561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 631753 - 631706
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatcatcac 50  Q
    |||||||||||||||||||||||||  |||||||||||||||||| ||||    
T  631753 atgtaatcatcatcactaataactt--aaacaacacaatataatcgtcac 631706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 233 - 279
Target Start/End: Original strand, 15189737 - 15189783
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatcttataa 279  Q
    ||||| ||||||| ||||||||||||||| |||||||||||||||||    
T  15189737 tcatcatcttataataatataacaacaacatattcatcatcttataa 15189783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 233 - 279
Target Start/End: Original strand, 15189770 - 15189816
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatcttataa 279  Q
    ||||| ||||||| ||||||||||||||| |||||||||||||||||    
T  15189770 tcatcatcttataataatataacaacaacatattcatcatcttataa 15189816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 22634932 - 22634885
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatcatcac 50  Q
    |||||||||||||||||||||||||  |||||||||||||| ||||||||    
T  22634932 atgtaatcatcatcactaataactt--aaacaacacaatatgatcatcac 22634885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 27532825 - 27532872
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatcatcac 50  Q
    |||||||||||||||||||||||||  |||| ||||||||||||||||||    
T  27532825 atgtaatcatcatcactaataactt--aaactacacaatataatcatcac 27532872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 277
Target Start/End: Original strand, 15223912 - 15223948
Alignment:
Q  241 ttatattaatataacaacaacgtattcatcatcttat 277  Q
    ||||| |||||||||||||||||||||||||||||||    
T  15223912 ttataataatataacaacaacgtattcatcatcttat 15223948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 279
Target Start/End: Original strand, 12423189 - 12423234
Alignment:
Q  234 catcttcttatattaatataacaacaacgtattcatcatcttataa 279  Q
    |||| ||||||| ||||||||||||||| |||||||||| ||||||    
T  12423189 catcgtcttataataatataacaacaacatattcatcattttataa 12423234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 274
Target Start/End: Complemental strand, 15482039 - 15481998
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatct 274  Q
    ||||| ||||||| ||||||||||||||| ||||||||||||    
T  15482039 tcatcatcttataataatataacaacaacatattcatcatct 15481998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 274
Target Start/End: Original strand, 19857007 - 19857048
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatct 274  Q
    ||||| ||||||| ||||||||||||||| ||||||||||||    
T  19857007 tcatcatcttataataatataacaacaacatattcatcatct 19857048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 62; Significance: 9e-27; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 233 - 305
Target Start/End: Complemental strand, 10103029 - 10102956
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacacca 305  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  10103029 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaacacatactaacacca 10102956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 233 - 305
Target Start/End: Complemental strand, 24629700 - 24629627
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacacca 305  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  24629700 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaacacatactaacacca 24629627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 233 - 305
Target Start/End: Original strand, 27600717 - 27600790
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacacca 305  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  27600717 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaacacatactaacacca 27600790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 233 - 305
Target Start/End: Complemental strand, 30346236 - 30346163
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacacca 305  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  30346236 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaacacatactaacacca 30346163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 233 - 305
Target Start/End: Complemental strand, 27384619 - 27384546
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacacca 305  Q
    |||||||||| |||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  27384619 tcatcttcttgtattaatataacgacaacgtattcatcatcttatgaaaatataatcaacacatactaacacca 27384546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 235 - 305
Target Start/End: Complemental strand, 27380571 - 27380500
Alignment:
Q  235 atcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacacca 305  Q
    |||||||| |||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  27380571 atcttcttgtattaatataacgacaacgtattcatcatcttatgaaaatataatcaacacatactaacacca 27380500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 10103302 - 10103255
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatcatc 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  10103302 atgtaatcatcatcactaataactttaaaacaacacaatataatcatc 10103255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 12902612 - 12902565
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatcatc 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  12902612 atgtaatcatcatcactaataactttaaaacaacacaatataatcatc 12902565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 24630053 - 24630006
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatcatc 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  24630053 atgtaatcatcatcactaataactttaaaacaacacaatataatcatc 24630006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 24645224 - 24645271
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatcatc 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  24645224 atgtaatcatcatcactaataactttaaaacaacacaatataatcatc 24645271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 24648000 - 24648047
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatcatc 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  24648000 atgtaatcatcatcactaataactttaaaacaacacaatataatcatc 24648047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 27600444 - 27600491
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatcatc 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  27600444 atgtaatcatcatcactaataactttaaaacaacacaatataatcatc 27600491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 30346663 - 30346616
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatcatc 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  30346663 atgtaatcatcatcactaataactttaaaacaacacaatataatcatc 30346616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 233 - 286
Target Start/End: Original strand, 31344221 - 31344274
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatcttataaaatataa 286  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  31344221 tcatcttcttgtattaatataacaataacgtattcatcatcttataaaatataa 31344274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 233 - 307
Target Start/End: Complemental strand, 41532227 - 41532149
Alignment:
Q  233 tcatcttcttatattaatataacaacaacg---tattcatcatcttat-aaaatataatcaacacatactaacaccata 307  Q
    |||||||| |||| |||||||||||||||    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  41532227 tcatcttcatataataatataacaacaacaacatattcatcatcttatcaaaatataatcaacacatactaacaccata 41532149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 27380999 - 27380952
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatcatc 48  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||    
T  27380999 atgtaatcatcatcactaataactttaaaacaacaccatataatcatc 27380952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 27384969 - 27384922
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatcatc 48  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||    
T  27384969 atgtaatcatcatcactaataactttaaaacaacaccatataatcatc 27384922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 31343990 - 31344035
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatca 46  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||    
T  31343990 atgtaatcatcatcactaataactttaaaacaacacaatgtaatca 31344035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 233 - 307
Target Start/End: Original strand, 1282318 - 1282396
Alignment:
Q  233 tcatcttcttatattaatataacaacaacg---tattcatcatcttat-aaaatataatcaacacatactaacaccata 307  Q
    |||||||| |||| |||||||||||||||    ||||||||||||||| ||||| ||||||||||||||||||||||||    
T  1282318 tcatcttcatataataatataacaacaacaacatattcatcatcttatcaaaatgtaatcaacacatactaacaccata 1282396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 242 - 305
Target Start/End: Original strand, 24648249 - 24648313
Alignment:
Q  242 tatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacacca 305  Q
    |||| ||||||||||||||| |||||||| | |||| ||||||||||||||||||||||||||||    
T  24648249 tataataatataacaacaacatattcatctttttatgaaaatataatcaacacatactaacacca 24648313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 6 - 46
Target Start/End: Complemental strand, 41532454 - 41532414
Alignment:
Q  6 atcatcatcactaataactttaaaacaacacaatataatca 46  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  41532454 atcatcatcactaataactttaaaacaacacaatgtaatca 41532414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 9784067 - 9784113
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatcatca 49  Q
    |||||||||||||||||||||||||  ||||||||||||||||| ||||    
T  9784067 atgtaatcatcatcactaataactt--aaacaacacaatataattatca 9784113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 62; Significance: 9e-27; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 233 - 305
Target Start/End: Original strand, 1009608 - 1009681
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacacca 305  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  1009608 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaacacatactaacacca 1009681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 233 - 305
Target Start/End: Complemental strand, 1926374 - 1926301
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacacca 305  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  1926374 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaacacatactaacacca 1926301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 233 - 305
Target Start/End: Complemental strand, 16376625 - 16376552
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacacca 305  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  16376625 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaacacatactaacacca 16376552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 233 - 305
Target Start/End: Complemental strand, 20925388 - 20925315
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacacca 305  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  20925388 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaacacatactaacacca 20925315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 233 - 305
Target Start/End: Original strand, 52634694 - 52634767
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacacca 305  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  52634694 tcatcttcttgtattaatataacaacaacgtattcatcatcttatgaaaatataatcaacacatactaacacca 52634767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 233 - 286
Target Start/End: Original strand, 33796291 - 33796344
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatcttataaaatataa 286  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33796291 tcatcttcttatattaatataacaacaacgtattcatcatcttataaaatataa 33796344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 1009335 - 1009382
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatcatc 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  1009335 atgtaatcatcatcactaataactttaaaacaacacaatataatcatc 1009382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 1926801 - 1926754
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatcatc 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  1926801 atgtaatcatcatcactaataactttaaaacaacacaatataatcatc 1926754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 16376821 - 16376774
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatcatc 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  16376821 atgtaatcatcatcactaataactttaaaacaacacaatataatcatc 16376774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 20925815 - 20925768
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatcatc 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  20925815 atgtaatcatcatcactaataactttaaaacaacacaatataatcatc 20925768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 233 - 287
Target Start/End: Original strand, 21406553 - 21406608
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataat 287  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  21406553 tcatcttcttatattaatataacaacaacgtattcatcatcttatgaaaatataat 21406608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 241 - 307
Target Start/End: Original strand, 33796436 - 33796503
Alignment:
Q  241 ttatattaatataacaacaacgtattcatcatcttataaaa-tataatcaacacatactaacaccata 307  Q
    ||||| ||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||    
T  33796436 ttataataatataacaacaacatatacatcatcttataaaaatataatcaacacatactaacaccata 33796503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 52634341 - 52634388
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatcatc 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  52634341 atgtaatcatcatcactaataactttaaaacaacacaatataatcatc 52634388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 233 - 286
Target Start/End: Complemental strand, 20229995 - 20229941
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataa 286  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  20229995 tcatcttcttatattaatataacaacaacgtattcatcatcttatgaaaatataa 20229941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 33796106 - 33796151
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatca 46  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||    
T  33796106 atgtaatcatcatcactaataactttaaaacaacacaatgtaatca 33796151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 22132104 - 22132058
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatcatca 49  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||    
T  22132104 atgtaatcatcatcactaataactt--aaacaacacaatataatcatca 22132058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 21406326 - 21406373
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatcatcac 50  Q
    |||||||||||||||||||||||||  |||| ||||||||||||||||||    
T  21406326 atgtaatcatcatcactaataactt--aaactacacaatataatcatcac 21406373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 233 - 279
Target Start/End: Complemental strand, 28195153 - 28195107
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatcttataa 279  Q
    ||||| ||||||| ||||||||||||||| |||||||||||||||||    
T  28195153 tcatcatcttataataatataacaacaacatattcatcatcttataa 28195107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 233 - 279
Target Start/End: Complemental strand, 35982386 - 35982340
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatcttataa 279  Q
    ||||| ||||||| ||||||||||||||| |||||||||||||||||    
T  35982386 tcatcatcttataataatataacaacaacatattcatcatcttataa 35982340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 233 - 274
Target Start/End: Complemental strand, 21740525 - 21740484
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatct 274  Q
    ||||| ||||||| ||||||||||||||||||||||||||||    
T  21740525 tcatcatcttataataatataacaacaacgtattcatcatct 21740484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 41801284 - 41801238
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatcatca 49  Q
    |||||||||||||||||||||| ||  ||||||||||||||||||||||    
T  41801284 atgtaatcatcatcactaataaatt--aaacaacacaatataatcatca 41801238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 292
Target Start/End: Original strand, 12271028 - 12271088
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatcttataa-aatataatcaaca 292  Q
    ||||| ||| ||| ||||||||||||||| ||||||||||||||||| ||||||| |||||    
T  12271028 tcatcatctcataataatataacaacaacatattcatcatcttataataatataagcaaca 12271088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 277
Target Start/End: Complemental strand, 39244927 - 39244891
Alignment:
Q  241 ttatattaatataacaacaacgtattcatcatcttat 277  Q
    ||||| |||||||||||||||||||||||||||||||    
T  39244927 ttataataatataacaacaacgtattcatcatcttat 39244891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 277
Target Start/End: Complemental strand, 39248482 - 39248446
Alignment:
Q  241 ttatattaatataacaacaacgtattcatcatcttat 277  Q
    ||||| |||||||||||||||||||||||||||||||    
T  39248482 ttataataatataacaacaacgtattcatcatcttat 39248446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 277
Target Start/End: Complemental strand, 41389375 - 41389339
Alignment:
Q  241 ttatattaatataacaacaacgtattcatcatcttat 277  Q
    ||||| |||||||||||||||||||||||||||||||    
T  41389375 ttataataatataacaacaacgtattcatcatcttat 41389339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 281
Target Start/End: Complemental strand, 41801139 - 41801091
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatcttataaaa 281  Q
    ||||| |||||||  |||||||||||||| |||||||||||||||||||    
T  41801139 tcatcatcttataaaaatataacaacaacatattcatcatcttataaaa 41801091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 274
Target Start/End: Original strand, 20315609 - 20315650
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatct 274  Q
    ||||| ||||||| ||||||||||||||| ||||||||||||    
T  20315609 tcatcatcttataataatataacaacaacatattcatcatct 20315650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 274
Target Start/End: Complemental strand, 41306283 - 41306242
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatct 274  Q
    ||||| ||||||| ||||||||||||||| ||||||||||||    
T  41306283 tcatcatcttataataatataacaacaacatattcatcatct 41306242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 279
Target Start/End: Complemental strand, 21740389 - 21740349
Alignment:
Q  239 tcttatattaatataacaacaacgtattcatcatcttataa 279  Q
    ||||||| ||||||||||||||| |||||||||||| ||||    
T  21740389 tcttataataatataacaacaacatattcatcatctcataa 21740349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 233 - 281
Target Start/End: Complemental strand, 41801171 - 41801124
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatcttataaaa 281  Q
    ||||| ||||||| ||||||| ||||||| |||||||||||||||||||    
T  41801171 tcatcatcttataataatatatcaacaac-tattcatcatcttataaaa 41801124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0525
Description:

Target: scaffold0525; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 233 - 305
Target Start/End: Complemental strand, 5079 - 5006
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacacca 305  Q
    ||||||| || |||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||    
T  5079 tcatctttttgtattaatataacaacaacatattcatcatcttatgaaaacataatcaacacatactaacacca 5006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 233 - 286
Target Start/End: Complemental strand, 10787 - 10734
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatcttataaaatataa 286  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  10787 tcatcttcttatattaatataacaacaacgtattcatcatcttataaagtataa 10734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 11065 - 11027
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaat 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  11065 atgtaatcatcatcactaataactttaaaacaacacaat 11027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 50; Significance: 1e-19; HSPs: 4)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 233 - 286
Target Start/End: Original strand, 79428 - 79481
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatcttataaaatataa 286  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  79428 tcatcttcttatattaatataacaacaatgtattcatcatcttataaaatataa 79481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 248 - 307
Target Start/End: Original strand, 79475 - 79535
Alignment:
Q  248 aatataacaacaacgtattcatcatcttata-aaatataatcaacacatactaacaccata 307  Q
    ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||    
T  79475 aatataacaacaacgtattcatcatcttacataaatataatcaacacatactaacaccata 79535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 233 - 286
Target Start/End: Complemental strand, 62621 - 62568
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataa 286  Q
    |||||||||||||||| ||||||||||||||||||| |||||||| |||||||||    
T  62621 tcatcttcttatatta-tataacaacaacgtattcaacatcttatgaaaatataa 62568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 233 - 286
Target Start/End: Complemental strand, 66537 - 66484
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataa 286  Q
    |||||||||||||||| ||||||||||||||||||| |||||||| |||||||||    
T  66537 tcatcttcttatatta-tataacaacaacgtattcaacatcttatgaaaatataa 66484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 49; Significance: 5e-19; HSPs: 3)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 233 - 281
Target Start/End: Original strand, 19128 - 19176
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatcttataaaa 281  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  19128 tcatcttcttatattaatataacaacaacgtattcatcatcttataaaa 19176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 233 - 281
Target Start/End: Original strand, 19232 - 19280
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatcttataaaa 281  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  19232 tcatcttcttatattaatctaacaacaacgtattcatcatcttataaaa 19280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 18899 - 18942
Alignment:
Q  4 taatcatcatcactaataactttaaaacaacacaatataatcatca 49  Q
    |||||||||||||||||||||   ||||||||||||||||||||||    
T  18899 taatcatcatcactaataactg--aaacaacacaatataatcatca 18942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 49; Significance: 5e-19; HSPs: 3)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 233 - 281
Target Start/End: Original strand, 11061 - 11109
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatcttataaaa 281  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  11061 tcatcttcttatattaatataacaacaacgtattcatcatcttataaaa 11109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 6 - 46
Target Start/End: Original strand, 10834 - 10874
Alignment:
Q  6 atcatcatcactaataactttaaaacaacacaatataatca 46  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  10834 atcatcatcactaataactttaaaacaacacaatgtaatca 10874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 233 - 286
Target Start/End: Original strand, 11094 - 11148
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataa 286  Q
    ||||| |||||||  ||||||||||||| |||||||||||||||| |||||||||    
T  11094 tcatcatcttataaaaatataacaacaatgtattcatcatcttatgaaaatataa 11148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 49; Significance: 5e-19; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 242 - 305
Target Start/End: Complemental strand, 68392 - 68328
Alignment:
Q  242 tatattaatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacacca 305  Q
    |||| ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  68392 tataataatataacaacaacatattcatcatcttatgaaaatataatcaacacatactaacacca 68328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 68561 - 68514
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatcatc 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  68561 atgtaatcatcatcactaataactttaaaacaacacaatataatcatc 68514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0380 (Bit Score: 47; Significance: 8e-18; HSPs: 3)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 233 - 286
Target Start/End: Original strand, 955 - 1009
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatcttat-aaaatataa 286  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  955 tcatcttcttatattaatataacaacaacgtattcatcatcttatgaaaatataa 1009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0380; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 4047 - 4094
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatcatcac 50  Q
    |||||||||| ||||||||||||||  |||| ||||||||||||||||||    
T  4047 atgtaatcataatcactaataactt--aaactacacaatataatcatcac 4094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0380; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 50
Target Start/End: Original strand, 1 - 42
Alignment:
Q  7 tcatcatcactaataactttaaaacaacacaatataatcatcac 50  Q
    |||||||||||||||||||  |||| ||||||||||||||||||    
T  1 tcatcatcactaataactt--aaactacacaatataatcatcac 42  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 233 - 307
Target Start/End: Complemental strand, 33940 - 33862
Alignment:
Q  233 tcatcttcttatattaatataacaacaacg---tattcatcatcttat-aaaatataatcaacacatactaacaccata 307  Q
    |||||||| |||| |||||||||||||||    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  33940 tcatcttcatataataatataacaacaacaacatattcatcatcttatcaaaatataatcaacacatactaacaccata 33862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 48
Target Start/End: Complemental strand, 34128 - 34089
Alignment:
Q  9 atcatcactaataactttaaaacaacacaatataatcatc 48  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  34128 atcatcactaataactttaaaacaacacaatataatcatc 34089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 233 - 307
Target Start/End: Complemental strand, 15359 - 15281
Alignment:
Q  233 tcatcttcttatattaatataacaacaacg---tattcatcatcttat-aaaatataatcaacacatactaacaccata 307  Q
    |||||||| |||| |||||||||||||||    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  15359 tcatcttcatataataatataacaacaacaacatattcatcatcttatcaaaatataatcaacacatactaacaccata 15281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 6 - 46
Target Start/End: Complemental strand, 15586 - 15546
Alignment:
Q  6 atcatcatcactaataactttaaaacaacacaatataatca 46  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  15586 atcatcatcactaataactttaaaacaacacaatgtaatca 15546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0410 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0410
Description:

Target: scaffold0410; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 14917 - 14962
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatca 46  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||    
T  14917 atgtaatcatcatcactaataactttaaaacaacacaatgtaatca 14962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 21345 - 21298
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatcatca 49  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  21345 atgtaatcatcatcactaataacttt-aaacaacacaatataatcatca 21298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 281
Target Start/End: Complemental strand, 21210 - 21162
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatcttataaaa 281  Q
    ||||| |||||||  |||||||||||||| |||||||||||||||||||    
T  21210 tcatcatcttataaaaatataacaacaacatattcatcatcttataaaa 21162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 60331 - 60283
Alignment:
Q  1 atgtaatcatcatcactaataac-tttaaaacaacacaatataatcatc 48  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  60331 atgtaatcatcatcactaataacttttaaaacaacacaatataatcatc 60283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1852 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold1852
Description:

Target: scaffold1852; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 46
Target Start/End: Complemental strand, 822 - 781
Alignment:
Q  5 aatcatcatcactaataactttaaaacaacacaatataatca 46  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  822 aatcatcatcactaataactttaaaacaacacaatgtaatca 781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 6966 - 6920
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatcatca 49  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||    
T  6966 atgtaatcatcatcactaataactt--aaacaacacaatataatcatca 6920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 233 - 281
Target Start/End: Complemental strand, 6889 - 6842
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatcttataaaa 281  Q
    ||||| ||||||| ||||||| ||||||| |||||||||||||||||||    
T  6889 tcatcatcttataataatatatcaacaac-tattcatcatcttataaaa 6842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 11850 - 11895
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatca 46  Q
    |||||||||||||||||||||| |||||||||||||||| ||||||    
T  11850 atgtaatcatcatcactaataattttaaaacaacacaatgtaatca 11895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0486 (Bit Score: 37; Significance: 0.000000000007; HSPs: 2)
Name: scaffold0486
Description:

Target: scaffold0486; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 233 - 281
Target Start/End: Original strand, 8885 - 8933
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatcttataaaa 281  Q
    ||||||| ||||||||||||||||| |||||||||||||| ||||||||    
T  8885 tcatctttttatattaatataacaaaaacgtattcatcattttataaaa 8933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0486; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 8650 - 8695
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatca 46  Q
    |||||||||||||||||||||||||||||| ||||| || ||||||    
T  8650 atgtaatcatcatcactaataactttaaaaaaacactatgtaatca 8695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0484 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0484
Description:

Target: scaffold0484; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 250 - 307
Target Start/End: Original strand, 76 - 134
Alignment:
Q  250 tataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaacaccata 307  Q
    |||||||||||| ||||||||||||||| ||||||||| ||||||||| ||||| ||||    
T  76 tataacaacaacatattcatcatcttataaaaatataaacaacacataataacatcata 134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 25573 - 25526
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatcatcac 50  Q
    ||||| |||||||||||||||||||  |||||||||||||||||||||||    
T  25573 atgtattcatcatcactaataactt--aaacaacacaatataatcatcac 25526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 279
Target Start/End: Complemental strand, 25491 - 25446
Alignment:
Q  234 catcttcttatattaatataacaacaacgtattcatcatcttataa 279  Q
    |||| ||||||| ||||||||||||||| ||||||||||| |||||    
T  25491 catcatcttatagtaatataacaacaacatattcatcatcatataa 25446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 8745 - 8699
Alignment:
Q  1 atgtaatcatcatcactaataactttaaaacaacacaatataatcatca 49  Q
    |||||||||||||||||||||| ||  ||||||||||||||||||||||    
T  8745 atgtaatcatcatcactaataaatt--aaacaacacaatataatcatca 8699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 302
Target Start/End: Complemental strand, 8500 - 8445
Alignment:
Q  248 aatataacaacaacgtattcatcatcttat-aaaatataatcaacacatactaaca 302  Q
    |||||||||||||| ||||||||||||||| ||||||||| || |||||| |||||    
T  8500 aatataacaacaacatattcatcatcttataaaaatataaacatcacataataaca 8445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 279
Target Start/End: Complemental strand, 8593 - 8555
Alignment:
Q  241 ttatattaatataacaacaacgtattcatcatcttataa 279  Q
    ||||| ||||||||||||||| |||||||||||||||||    
T  8593 ttataataatataacaacaacatattcatcatcttataa 8555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 233 - 279
Target Start/End: Complemental strand, 8667 - 8621
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatcttataa 279  Q
    ||||| |||| || ||||||||||||||| |||||||||||||||||    
T  8667 tcatcatcttctaataatataacaacaacatattcatcatcttataa 8621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 274
Target Start/End: Original strand, 6963 - 7004
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatct 274  Q
    ||||| ||||||| ||||||||||||||| ||||||||||||    
T  6963 tcatcatcttataataatataacaacaacatattcatcatct 7004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 274
Target Start/End: Complemental strand, 44480 - 44439
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatct 274  Q
    ||||| ||||||| ||||||||||||||| ||||||||||||    
T  44480 tcatcatcttataataatataacaacaacatattcatcatct 44439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 274
Target Start/End: Complemental strand, 44545 - 44504
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatct 274  Q
    ||||| ||||||| ||||||||||||||| ||||||||||||    
T  44545 tcatcatcttataataatataacaacaacatattcatcatct 44504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 274
Target Start/End: Original strand, 9072 - 9113
Alignment:
Q  233 tcatcttcttatattaatataacaacaacgtattcatcatct 274  Q
    ||||| ||||||| ||||||||||||||| ||||||||||||    
T  9072 tcatcatcttataataatataacaacaacatattcatcatct 9113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 247 - 286
Target Start/End: Complemental strand, 74117 - 74077
Alignment:
Q  247 taatataacaacaacgtattcatcatcttata-aaatataa 286  Q
    ||||||||||||||| |||||||||||||||| ||||||||    
T  74117 taatataacaacaacatattcatcatcttatagaaatataa 74077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 279
Target Start/End: Original strand, 362226 - 362266
Alignment:
Q  239 tcttatattaatataacaacaacgtattcatcatcttataa 279  Q
    ||||||| ||||||||||||||| |||||||||||| ||||    
T  362226 tcttataataatataacaacaacatattcatcatctcataa 362266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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