View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4937-Insertion-10 (Length: 221)
Name: NF4937-Insertion-10
Description: NF4937
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4937-Insertion-10 |
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| [»] scaffold0321 (1 HSPs) |
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Alignment Details
Target: scaffold0321 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: scaffold0321
Description:
Target: scaffold0321; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 8 - 221
Target Start/End: Original strand, 16374 - 16586
Alignment:
| Q |
8 |
attataccataggcatatgcatttttcatacacatgtatttttaactagacattatcatgtgatcttccacgtcctatatctgtactgctcttcaacaat |
107 |
Q |
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| T |
16374 |
attataccataggcatatgcatttttcatacacatgtatttttaactagacattatcatgtgatctttcacgtcctatatttgtactgctcttcaacaat |
16473 |
T |
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| Q |
108 |
catttattatcttgatggtttttcgaaccatctctttatatatttatagatattaatcatggttgcggtcacaaaaatttatataagcatttttgtatta |
207 |
Q |
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| T |
16474 |
catttatctacttgatggtttttcgaaccatctctttatatatttatagatattaatcatggttgcggtcacaaaaatttatataagca-ttttgtatta |
16572 |
T |
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| Q |
208 |
aatacatttattga |
221 |
Q |
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|||||||||||||| |
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| T |
16573 |
aatacatttattga |
16586 |
T |
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