View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4937-Insertion-7 (Length: 350)
Name: NF4937-Insertion-7
Description: NF4937
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4937-Insertion-7 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 322; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 322; E-Value: 0
Query Start/End: Original strand, 6 - 350
Target Start/End: Complemental strand, 6638334 - 6637989
Alignment:
| Q |
6 |
cacctttaaccaaggagtccttaatctttgaaacaactaactatgcttgaactttaataaggcccataaataagaacatgagttaatcctacaactcact |
105 |
Q |
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| T |
6638334 |
cacctttaacaaacgagtccttaatctttgaaacaactaactatgcttgaactttaataaggcccataaataagaacatgagttaatcctacaactcact |
6638235 |
T |
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| Q |
106 |
ttctataaagtaaggatcccatctctaacctttaaatttaagatcttaatatgctcaatcaattgcgaacattccttcattttcatctcaactttgagtc |
205 |
Q |
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| T |
6638234 |
ttctataaagtaaggatcccatctctaacctttaaatttaagatcttaatatgctcaatcaattgtgaacattccttcattttcatctcaactttgagtc |
6638135 |
T |
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| Q |
206 |
acttaagtttttctctcaaactaacaaccatccaccatactagcccttcctattcccaattattagcaacaatctcaaagaagcccatatgttttaacc- |
304 |
Q |
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| T |
6638134 |
acttaagtttttctctcaaactaacaaccatccaccatactagcccttcctattcccaattattagcaacaatctcaaagaagcccatatgttttaacca |
6638035 |
T |
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| Q |
305 |
aaaattgatgagcctaaaagctctgagaccacaaggctgactatct |
350 |
Q |
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| T |
6638034 |
aaaattgatgagcctaaaaggtctgagaccacaaggctgactatct |
6637989 |
T |
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