View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4938-Insertion-5 (Length: 128)

Name: NF4938-Insertion-5
Description: NF4938
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4938-Insertion-5
NF4938-Insertion-5
[»] chr5 (30 HSPs)
chr5 (7-128)||(8198188-8198309)
chr5 (7-128)||(16512800-16512921)
chr5 (15-128)||(22192639-22192752)
chr5 (7-128)||(8735501-8735622)
chr5 (7-127)||(12785969-12786089)
chr5 (7-128)||(1708916-1709037)
chr5 (7-127)||(12724486-12724606)
chr5 (7-128)||(3557429-3557550)
chr5 (7-128)||(6430784-6430905)
chr5 (7-128)||(18809777-18809898)
chr5 (7-128)||(25976346-25976467)
chr5 (7-128)||(27115110-27115231)
chr5 (7-128)||(5336400-5336520)
chr5 (7-128)||(38678673-38678794)
chr5 (7-127)||(26279862-26279981)
chr5 (15-128)||(20336702-20336815)
chr5 (7-128)||(37029507-37029628)
chr5 (7-120)||(17504434-17504547)
chr5 (7-127)||(24853518-24853638)
chr5 (7-128)||(37884226-37884350)
chr5 (15-111)||(11719167-11719263)
chr5 (7-127)||(13821306-13821417)
chr5 (7-86)||(8298502-8298581)
chr5 (65-128)||(9714522-9714585)
chr5 (27-125)||(31469843-31469941)
chr5 (7-108)||(27950878-27950978)
chr5 (68-128)||(2605800-2605860)
chr5 (78-127)||(37013620-37013669)
chr5 (26-127)||(27346817-27346918)
chr5 (7-45)||(37013580-37013618)
[»] chr2 (26 HSPs)
chr2 (7-128)||(45235032-45235153)
chr2 (7-128)||(6404921-6405042)
chr2 (7-128)||(17136912-17137033)
chr2 (7-128)||(44760840-44760961)
chr2 (7-128)||(5462004-5462125)
chr2 (7-128)||(45117815-45117936)
chr2 (7-128)||(31993288-31993409)
chr2 (7-128)||(38209138-38209259)
chr2 (8-128)||(15110944-15111064)
chr2 (7-127)||(38702818-38702938)
chr2 (14-128)||(7940753-7940867)
chr2 (7-128)||(13279482-13279603)
chr2 (7-128)||(1115910-1116032)
chr2 (7-128)||(15912517-15912641)
chr2 (7-128)||(30489979-30490099)
chr2 (7-128)||(43334477-43334598)
chr2 (23-127)||(16415294-16415398)
chr2 (7-125)||(31715108-31715226)
chr2 (15-128)||(1209134-1209238)
chr2 (64-128)||(16737432-16737496)
chr2 (36-125)||(17230351-17230440)
chr2 (16-92)||(34950842-34950918)
chr2 (23-90)||(18965772-18965839)
chr2 (16-68)||(5935528-5935580)
chr2 (53-100)||(45537101-45537148)
chr2 (82-127)||(16251422-16251467)
[»] chr8 (28 HSPs)
chr8 (7-127)||(39317829-39317949)
chr8 (7-128)||(39259512-39259633)
chr8 (7-127)||(42191564-42191684)
chr8 (14-128)||(8239197-8239311)
chr8 (7-127)||(28249550-28249671)
chr8 (7-128)||(35683226-35683347)
chr8 (7-127)||(11076992-11077112)
chr8 (7-128)||(6348121-6348242)
chr8 (7-128)||(23143337-23143458)
chr8 (7-128)||(31700238-31700359)
chr8 (7-128)||(32338637-32338758)
chr8 (7-127)||(13545465-13545585)
chr8 (7-127)||(13678888-13679008)
chr8 (7-128)||(20092683-20092804)
chr8 (7-128)||(37099129-37099250)
chr8 (7-128)||(24834980-24835099)
chr8 (7-128)||(40104459-40104580)
chr8 (7-128)||(43097737-43097857)
chr8 (7-121)||(225475-225589)
chr8 (7-128)||(585613-585726)
chr8 (7-128)||(628197-628310)
chr8 (7-121)||(701888-702002)
chr8 (7-121)||(739098-739212)
chr8 (7-121)||(862993-863107)
chr8 (15-81)||(42131181-42131247)
chr8 (76-128)||(42130943-42130995)
chr8 (23-128)||(4257886-4257991)
chr8 (82-125)||(38222506-38222549)
[»] chr7 (25 HSPs)
chr7 (7-128)||(44866845-44866966)
chr7 (15-127)||(29329946-29330058)
chr7 (7-128)||(35795263-35795384)
chr7 (9-128)||(7252919-7253038)
chr7 (9-128)||(14815865-14815984)
chr7 (9-128)||(15262860-15262979)
chr7 (7-128)||(25528318-25528439)
chr7 (7-128)||(26794130-26794251)
chr7 (15-128)||(34847033-34847146)
chr7 (7-128)||(46255663-46255784)
chr7 (7-127)||(36311309-36311429)
chr7 (7-128)||(33951741-33951863)
chr7 (7-128)||(35582673-35582794)
chr7 (7-128)||(38247346-38247467)
chr7 (7-120)||(43458951-43459064)
chr7 (7-127)||(43744911-43745031)
chr7 (7-128)||(15030249-15030370)
chr7 (7-128)||(114093-114215)
chr7 (7-128)||(41793497-41793619)
chr7 (7-118)||(32523864-32523976)
chr7 (47-127)||(37971147-37971227)
chr7 (7-98)||(8166532-8166623)
chr7 (7-92)||(38001034-38001117)
chr7 (7-125)||(24686415-24686533)
chr7 (42-97)||(35965298-35965353)
[»] chr4 (48 HSPs)
chr4 (7-128)||(4189097-4189218)
chr4 (7-128)||(9035309-9035430)
chr4 (7-128)||(13753078-13753199)
chr4 (7-128)||(28779996-28780117)
chr4 (7-128)||(38217494-38217615)
chr4 (7-127)||(1603589-1603709)
chr4 (15-128)||(5419642-5419755)
chr4 (7-128)||(31093905-31094026)
chr4 (7-128)||(45229875-45229996)
chr4 (7-128)||(47605203-47605324)
chr4 (7-128)||(47984141-47984262)
chr4 (7-128)||(53513097-53513218)
chr4 (7-128)||(55609735-55609856)
chr4 (7-127)||(6964258-6964378)
chr4 (8-128)||(51889976-51890096)
chr4 (7-126)||(35159526-35159645)
chr4 (7-126)||(35319090-35319209)
chr4 (14-128)||(16024679-16024793)
chr4 (7-128)||(167739-167860)
chr4 (7-128)||(52416143-52416263)
chr4 (7-120)||(52502214-52502327)
chr4 (7-127)||(40728835-40728955)
chr4 (7-127)||(51539420-51539539)
chr4 (14-128)||(56318593-56318707)
chr4 (7-120)||(4353396-4353509)
chr4 (7-127)||(15542032-15542152)
chr4 (7-127)||(38550484-38550604)
chr4 (9-128)||(40690628-40690747)
chr4 (7-118)||(49375122-49375233)
chr4 (7-128)||(38988308-38988429)
chr4 (7-111)||(45657151-45657255)
chr4 (15-128)||(4048950-4049063)
chr4 (7-128)||(52917119-52917239)
chr4 (7-127)||(16452756-16452867)
chr4 (28-128)||(28310095-28310195)
chr4 (7-128)||(53271657-53271780)
chr4 (7-128)||(2012948-2013060)
chr4 (7-127)||(56462880-56463000)
chr4 (9-100)||(30004365-30004456)
chr4 (47-128)||(18559610-18559691)
chr4 (7-128)||(33281870-33281982)
chr4 (47-128)||(55137484-55137565)
chr4 (47-128)||(45925428-45925509)
chr4 (7-128)||(44109385-44109496)
chr4 (7-85)||(45462994-45463072)
chr4 (42-106)||(40760326-40760390)
chr4 (77-128)||(45463500-45463551)
chr4 (57-125)||(17647572-17647641)
[»] chr3 (32 HSPs)
chr3 (7-128)||(47647723-47647844)
chr3 (7-128)||(49324925-49325046)
chr3 (7-128)||(39353914-39354035)
chr3 (7-128)||(47012972-47013093)
chr3 (7-128)||(36402032-36402153)
chr3 (7-128)||(47372383-47372504)
chr3 (7-128)||(48065727-48065848)
chr3 (9-128)||(44205065-44205184)
chr3 (9-128)||(53816743-53816862)
chr3 (7-128)||(16479012-16479134)
chr3 (9-127)||(30390511-30390629)
chr3 (7-128)||(228184-228305)
chr3 (7-128)||(8484047-8484167)
chr3 (7-128)||(21448262-21448383)
chr3 (7-128)||(49165314-49165434)
chr3 (7-128)||(6937232-6937351)
chr3 (14-128)||(32530598-32530712)
chr3 (7-128)||(41192970-41193091)
chr3 (7-128)||(3939082-3939203)
chr3 (7-116)||(26501421-26501529)
chr3 (15-121)||(31764413-31764519)
chr3 (7-125)||(22154895-22155013)
chr3 (53-125)||(26981167-26981239)
chr3 (15-83)||(41972421-41972489)
chr3 (7-62)||(9128444-9128499)
chr3 (7-62)||(9136551-9136606)
chr3 (7-56)||(39587377-39587426)
chr3 (77-125)||(9128501-9128549)
chr3 (77-125)||(9136608-9136656)
chr3 (23-89)||(9332779-9332844)
chr3 (7-89)||(21972218-21972300)
chr3 (7-89)||(21994649-21994731)
[»] chr1 (36 HSPs)
chr1 (7-128)||(29962203-29962324)
chr1 (7-126)||(7197656-7197775)
chr1 (7-128)||(12699762-12699883)
chr1 (7-128)||(22859477-22859597)
chr1 (7-128)||(33802137-33802258)
chr1 (7-128)||(39600529-39600650)
chr1 (7-128)||(48963544-48963665)
chr1 (7-126)||(41087223-41087342)
chr1 (7-126)||(41091991-41092110)
chr1 (7-128)||(38861498-38861618)
chr1 (7-127)||(22333485-22333605)
chr1 (7-127)||(41724285-41724405)
chr1 (7-127)||(50261207-50261327)
chr1 (7-127)||(12529181-12529301)
chr1 (7-128)||(29945970-29946092)
chr1 (7-127)||(3516803-3516924)
chr1 (7-128)||(12523353-12523474)
chr1 (7-128)||(49852533-49852654)
chr1 (7-127)||(10310182-10310302)
chr1 (7-120)||(14586554-14586667)
chr1 (7-97)||(41899527-41899617)
chr1 (47-128)||(23983240-23983321)
chr1 (7-127)||(42881829-42881941)
chr1 (43-128)||(52631563-52631648)
chr1 (9-98)||(27217608-27217697)
chr1 (7-84)||(44754661-44754738)
chr1 (7-128)||(30233563-30233673)
chr1 (7-100)||(43253462-43253555)
chr1 (7-106)||(44497290-44497383)
chr1 (65-128)||(37953009-37953072)
chr1 (82-127)||(3470368-3470413)
chr1 (76-127)||(44753247-44753298)
chr1 (60-125)||(30516144-30516210)
chr1 (24-125)||(21737241-21737342)
chr1 (53-125)||(7562298-7562370)
chr1 (57-125)||(6603337-6603406)
[»] chr6 (14 HSPs)
chr6 (7-127)||(31722114-31722234)
chr6 (9-128)||(304565-304684)
chr6 (7-127)||(11975778-11975898)
chr6 (7-127)||(34540642-34540762)
chr6 (14-128)||(34951225-34951339)
chr6 (7-128)||(439859-439980)
chr6 (7-128)||(16396149-16396270)
chr6 (7-128)||(31272062-31272183)
chr6 (7-118)||(18574737-18574848)
chr6 (7-118)||(18584618-18584729)
chr6 (9-126)||(29437315-29437432)
chr6 (7-127)||(9304211-9304331)
chr6 (9-127)||(481508-481626)
chr6 (15-128)||(31319334-31319444)
[»] scaffold0168 (1 HSPs)
scaffold0168 (15-128)||(17799-17912)
[»] scaffold0209 (1 HSPs)
scaffold0209 (7-128)||(14374-14487)
[»] scaffold0121 (1 HSPs)
scaffold0121 (7-111)||(46657-46761)
[»] scaffold0064 (1 HSPs)
scaffold0064 (25-128)||(61020-61123)


Alignment Details
Target: chr5 (Bit Score: 106; Significance: 2e-53; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 106; E-Value: 2e-53
Query Start/End: Original strand, 7 - 128
Target Start/End: Original strand, 8198188 - 8198309
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8198188 agaaatagatttaggatcttatgtaataagcttaaaaagcttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 8198287  T
Q  107 gtcttcttatttctgtttttta 128  Q
    ||||| ||||||||||||||||    
T  8198288 gtctttttatttctgtttttta 8198309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 106; E-Value: 2e-53
Query Start/End: Original strand, 7 - 128
Target Start/End: Complemental strand, 16512921 - 16512800
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16512921 agaaatagatttaggatcttatgtaataagcttaaaaagcttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 16512822  T
Q  107 gtcttcttatttctgtttttta 128  Q
    ||||| ||||||||||||||||    
T  16512821 gtctttttatttctgtttttta 16512800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 106; E-Value: 2e-53
Query Start/End: Original strand, 15 - 128
Target Start/End: Original strand, 22192639 - 22192752
Alignment:
Q  15 atttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgtgtcttctt 114  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22192639 atttaggatcttatgtaataagcttagatagcttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgtgtcttctt 22192738  T
Q  115 atttctgtttttta 128  Q
    ||||||||||||||    
T  22192739 atttctgtttttta 22192752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 102; E-Value: 4e-51
Query Start/End: Original strand, 7 - 128
Target Start/End: Original strand, 8735501 - 8735622
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  8735501 agaaatagatttaggatcttatgtaataagcttaaaaagcttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttaggtttgt 8735600  T
Q  107 gtcttcttatttctgtttttta 128  Q
    ||||| ||||||||||||||||    
T  8735601 gtctttttatttctgtttttta 8735622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 101; E-Value: 2e-50
Query Start/End: Original strand, 7 - 127
Target Start/End: Original strand, 12785969 - 12786089
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  12785969 agaaatagatttaggatcttatgtaataagcttaaaaagcttgaaaattattgtaatgtattgtacatatattaataaaatgagttgtttttatgtttgt 12786068  T
Q  107 gtcttcttatttctgtttttt 127  Q
    ||||| |||||||||||||||    
T  12786069 gtctttttatttctgtttttt 12786089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 98; E-Value: 1e-48
Query Start/End: Original strand, 7 - 128
Target Start/End: Complemental strand, 1709037 - 1708916
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||| ||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1709037 agaaatagatttagcatcttatgtaataagcttaaaaagcttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 1708938  T
Q  107 gtcttcttatttctgtttttta 128  Q
     |||| ||||||||||||||||    
T  1708937 atctttttatttctgtttttta 1708916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 97; E-Value: 4e-48
Query Start/End: Original strand, 7 - 127
Target Start/End: Original strand, 12724486 - 12724606
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||||||||||||||||||||||| |||  |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  12724486 agaaatagatttaggatcttatgtaataagcttaaaaaacttgaaaattattgtaatgtattgtacatatattaataaaatgagttgtttttatgtttgt 12724585  T
Q  107 gtcttcttatttctgtttttt 127  Q
    ||||| |||||||||||||||    
T  12724586 gtctttttatttctgtttttt 12724606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 94; E-Value: 3e-46
Query Start/End: Original strand, 7 - 128
Target Start/End: Original strand, 3557429 - 3557550
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||||||||||||||||||||||| |||| |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  3557429 agaaatagatttaggatcttatgtaataagcttaaaaagcttgaaaattattataatgtattgttcatataataataaaatgagttgtttttatgtttgt 3557528  T
Q  107 gtcttcttatttctgtttttta 128  Q
    ||||| |||||| |||||||||    
T  3557529 gtctttttatttatgtttttta 3557550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 94; E-Value: 3e-46
Query Start/End: Original strand, 7 - 128
Target Start/End: Complemental strand, 6430905 - 6430784
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||  ||||||||||||||||||| |||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6430905 agaaatagatttaacatcttatgtaataagcttaaaaaacttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 6430806  T
Q  107 gtcttcttatttctgtttttta 128  Q
    ||||| ||||||||||||||||    
T  6430805 gtctttttatttctgtttttta 6430784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 94; E-Value: 3e-46
Query Start/End: Original strand, 7 - 128
Target Start/End: Original strand, 18809777 - 18809898
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||||||||||||||||||||||| |||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18809777 agaaatagatttaggatcttatgtaataagcttaaaaaacttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 18809876  T
Q  107 gtcttcttatttctgtttttta 128  Q
    ||||| |||||| || ||||||    
T  18809877 gtctttttatttatgattttta 18809898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 94; E-Value: 3e-46
Query Start/End: Original strand, 7 - 128
Target Start/End: Complemental strand, 25976467 - 25976346
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  25976467 agaaatagatttaggatcttatgtaataagcttaaaaagcttgaaaattattgtaatgtattgttcgtatattaataaaatgagttgtttttatatttgt 25976368  T
Q  107 gtcttcttatttctgtttttta 128  Q
    ||||| |||||| |||||||||    
T  25976367 gtctttttatttatgtttttta 25976346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 94; E-Value: 3e-46
Query Start/End: Original strand, 7 - 128
Target Start/End: Original strand, 27115110 - 27115231
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| |||||| |||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  27115110 agaaatagatttatgatcttatgtaataagtttaaaaagcttgaaaattattgtaatgtattgttcatatattaataaaattagttgtttttatgtttgt 27115209  T
Q  107 gtcttcttatttctgtttttta 128  Q
    ||||| ||||||||||||||||    
T  27115210 gtctttttatttctgtttttta 27115231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 90; E-Value: 6e-44
Query Start/End: Original strand, 7 - 128
Target Start/End: Complemental strand, 5336520 - 5336400
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||| ||||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  5336520 agaaatagatttagcatcttatgtaataagcttaaaaagcttgaaaattattgtaatctattgttcatatattaataaaatgagttg-ttttatgtttgt 5336422  T
Q  107 gtcttcttatttctgtttttta 128  Q
    ||||| ||||||||||||||||    
T  5336421 gtctttttatttctgtttttta 5336400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 90; E-Value: 6e-44
Query Start/End: Original strand, 7 - 128
Target Start/End: Complemental strand, 38678794 - 38678673
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||| |||| |||||||||||||||||||||| |||||||||||| |    
T  38678794 agaaatagatttaggatcttatgtaataagcttaaaaagcttgaaaattattgtaatctattattcatatattaataaaatgagtggtttttatgtttat 38678695  T
Q  107 gtcttcttatttctgtttttta 128  Q
    ||||| ||||||||||||||||    
T  38678694 gtctttttatttctgtttttta 38678673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 89; E-Value: 2e-43
Query Start/End: Original strand, 7 - 127
Target Start/End: Original strand, 26279862 - 26279981
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||||||||||||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  26279862 agaaatagatttaggatcttatgtaatacgcttaaaaagcttgaaaattattgtaatgtattgttcatatattaat-caatgagttgtttttatgtttgt 26279960  T
Q  107 gtcttcttatttctgtttttt 127  Q
    ||||| |||||||||||||||    
T  26279961 gtctttttatttctgtttttt 26279981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 86; E-Value: 2e-41
Query Start/End: Original strand, 15 - 128
Target Start/End: Complemental strand, 20336815 - 20336702
Alignment:
Q  15 atttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgtgtcttctt 114  Q
    |||||| ||||||||||||| ||||| |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| ||    
T  20336815 atttagtatcttatgtaataggcttaaaaagcttgaaaattattgtaatgtattattcatatattaataaaatgagttgtttttatatttgtgtcttttt 20336716  T
Q  115 atttctgtttttta 128  Q
    ||||||||||||||    
T  20336715 atttctgtttttta 20336702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 86; E-Value: 2e-41
Query Start/End: Original strand, 7 - 128
Target Start/End: Complemental strand, 37029628 - 37029507
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| |||| |||||||||||||||||||||| |||| ||||||||||||||||| |||||||||| |||||||||| |||||| |||||||||||||    
T  37029628 agaaatagattaaggatcttatgtaataagcttaaaaagcttgaaaattattgtaatatattgttcatgtattaataaactgagttatttttatgtttgt 37029529  T
Q  107 gtcttcttatttctgtttttta 128  Q
    ||||| ||||||||||||||||    
T  37029528 gtctttttatttctgtttttta 37029507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 82; E-Value: 4e-39
Query Start/End: Original strand, 7 - 120
Target Start/End: Original strand, 17504434 - 17504547
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| |||||| |||||||| ||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17504434 agaaatagatttatgatcttatataataagtttaaaaagcttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 17504533  T
Q  107 gtcttcttatttct 120  Q
    ||||| ||| ||||    
T  17504534 gtctttttaattct 17504547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 77; E-Value: 4e-36
Query Start/End: Original strand, 7 - 127
Target Start/End: Complemental strand, 24853638 - 24853518
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| |||||||||||| |||||||||||||| |||| |||||||||| |||||| | ||||||||||||||||||||||| |||||||||||||| |    
T  24853638 agaaatagatttaggatctcatgtaataagcttaaaaagcttgaaaattaatgtaatctgttgttcatatattaataaaatgatttgtttttatgtttat 24853539  T
Q  107 gtcttcttatttctgtttttt 127  Q
    ||||| |||||| ||||||||    
T  24853538 gtctttttatttatgtttttt 24853518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 75; E-Value: 6e-35
Query Start/End: Original strand, 7 - 128
Target Start/End: Original strand, 37884226 - 37884350
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgttttt---atgtt 103  Q
    |||||| |||||||||||||| |||||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||| |||||   || ||    
T  37884226 agaaatagatttaggatcttacgtaataagcttaaaaagcttgaaaattattgtaatgtattgttcaaatattaataaaatgagttttttttttaatatt 37884325  T
Q  104 tgtgtcttcttatttctgtttttta 128  Q
    |||||| | ||||||||||||||||    
T  37884326 tgtgtcgttttatttctgtttttta 37884350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 65; E-Value: 5e-29
Query Start/End: Original strand, 15 - 111
Target Start/End: Complemental strand, 11719263 - 11719167
Alignment:
Q  15 atttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgtgtctt 111  Q
    ||||| |||||||||||||||| ||| |||| |||||||||||||||| |||||||||||||| |||||||||||||||||||||||| ||| ||||    
T  11719263 atttaagatcttatgtaataagtttaaaaagcttgaaaattattgtaacgtattgttcatataataataaaatgagttgtttttatgtctgtctctt 11719167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 65; E-Value: 5e-29
Query Start/End: Original strand, 7 - 127
Target Start/End: Complemental strand, 13821417 - 13821306
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| |||||| ||||||||||||||||||||         |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  13821417 agaaatagatttaagatcttatgtaataagctta---------aaaattattgtaatgtattgttcacatattaataaaatgagttggttttatgtttgt 13821327  T
Q  107 gtcttcttatttctgtttttt 127  Q
    ||||| |||||| ||||||||    
T  13821326 gtctttttatttatgtttttt 13821306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 64; E-Value: 2e-28
Query Start/End: Original strand, 7 - 86
Target Start/End: Complemental strand, 8298581 - 8298502
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaa 86  Q
    |||||| ||||||||||||||||||||||||||| |||| |||||||||||||||| |||||||||||||||||||||||    
T  8298581 agaaatagatttaggatcttatgtaataagcttaaaaagcttgaaaattattgtaacgtattgttcatatattaataaaa 8298502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 56; E-Value: 1e-23
Query Start/End: Original strand, 65 - 128
Target Start/End: Complemental strand, 9714585 - 9714522
Alignment:
Q  65 tattgttcatatattaataaaatgagttgtttttatgtttgtgtcttcttatttctgtttttta 128  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||    
T  9714585 tattgttcatatattaataaaatgagttgtttttatgtttgtgtctttttatttctatttttta 9714522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 55; E-Value: 5e-23
Query Start/End: Original strand, 27 - 125
Target Start/End: Complemental strand, 31469941 - 31469843
Alignment:
Q  27 atgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgtgtcttcttatttctgtttt 125  Q
    |||||||||||||| |||| || || |||||||||||||||| |||| |||| |||||||||| |||||||||| ||| |||||| |||||||||||||    
T  31469941 atgtaataagcttaaaaagcttcaacattattgtaatgtattattcaaatatcaataaaatgacttgtttttatctttttgtctttttatttctgtttt 31469843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 54; E-Value: 2e-22
Query Start/End: Original strand, 7 - 108
Target Start/End: Original strand, 27950878 - 27950978
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| | |||||| |||||||||||||||||| |||| || || ||||||||||| |||| ||||||||||||||||||||||| ||||||| |||||    
T  27950878 agaaatagttttaggttcttatgtaataagcttaaaaagcttcaacattattgtaat-tattattcatatattaataaaatgagttctttttatctttgt 27950976  T
Q  107 gt 108  Q
    ||    
T  27950977 gt 27950978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 68 - 128
Target Start/End: Complemental strand, 2605860 - 2605800
Alignment:
Q  68 tgttcatatattaataaaatgagttgtttttatgtttgtgtcttcttatttctgtttttta 128  Q
    |||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||    
T  2605860 tgttcatatattaataaaatgagttaattttatgtttgtgtctttttatttctgtttttta 2605800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 78 - 127
Target Start/End: Original strand, 37013620 - 37013669
Alignment:
Q  78 ttaataaaatgagttgtttttatgtttgtgtcttcttatttctgtttttt 127  Q
    |||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  37013620 ttaataaaatgagttgtttttatgtttgtgtctttttaattctgtttttt 37013669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 26 - 127
Target Start/End: Complemental strand, 27346918 - 27346817
Alignment:
Q  26 tatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgtg-tcttcttatttctgttt 124  Q
    ||||||||||||||| |||| || |  ||||||| ||| |||| ||||||||||||||||| |||||  |||||| |||||| |||| ||| ||||||||    
T  27346918 tatgtaataagcttaaaaagcttcaccattattgaaat-tattattcatatattaataaaacgagttccttttatctttgtgttctttttaattctgttt 27346820  T
Q  125 ttt 127  Q
    |||    
T  27346819 ttt 27346817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 45
Target Start/End: Original strand, 37013580 - 37013618
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaag 45  Q
    |||||| ||||||||||||||||||||||||||| ||||    
T  37013580 agaaatagatttaggatcttatgtaataagcttataaag 37013618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 106; Significance: 2e-53; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 106; E-Value: 2e-53
Query Start/End: Original strand, 7 - 128
Target Start/End: Original strand, 45235032 - 45235153
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45235032 agaaatagatttaggatcttatgtaataagcttaaaaagcttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 45235131  T
Q  107 gtcttcttatttctgtttttta 128  Q
    ||||| ||||||||||||||||    
T  45235132 gtctttttatttctgtttttta 45235153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 102; E-Value: 4e-51
Query Start/End: Original strand, 7 - 128
Target Start/End: Original strand, 6404921 - 6405042
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  6404921 agaaatagatttaggatcttatgtaataagcttaaaaagcttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttct 6405020  T
Q  107 gtcttcttatttctgtttttta 128  Q
    ||||| ||||||||||||||||    
T  6405021 gtctttttatttctgtttttta 6405042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 102; E-Value: 4e-51
Query Start/End: Original strand, 7 - 128
Target Start/End: Complemental strand, 17137033 - 17136912
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17137033 agaaatagatttaggaacttatgtaataagcttaaaaagcttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 17136934  T
Q  107 gtcttcttatttctgtttttta 128  Q
    ||||| ||||||||||||||||    
T  17136933 gtctttttatttctgtttttta 17136912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 102; E-Value: 4e-51
Query Start/End: Original strand, 7 - 128
Target Start/End: Original strand, 44760840 - 44760961
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44760840 agaaatagatttaggatcttatgtaataagcttgaaaaggttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 44760939  T
Q  107 gtcttcttatttctgtttttta 128  Q
    ||||| ||||||||||||||||    
T  44760940 gtctttttatttctgtttttta 44760961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 98; E-Value: 1e-48
Query Start/End: Original strand, 7 - 128
Target Start/End: Complemental strand, 5462125 - 5462004
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||    
T  5462125 agaaatagatttaggatcttatgtaataagcttaaaaagcttgaaaattattgtaatgtattgttcatatattaataaaatgaattttttttatgtttgt 5462026  T
Q  107 gtcttcttatttctgtttttta 128  Q
    ||||| ||||||||||||||||    
T  5462025 gtctttttatttctgtttttta 5462004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 98; E-Value: 1e-48
Query Start/End: Original strand, 7 - 128
Target Start/End: Original strand, 45117815 - 45117936
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| |||||| |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45117815 agaaatagatttaagatcttatgtaataagcttaaaaagcttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 45117914  T
Q  107 gtcttcttatttctgtttttta 128  Q
    || || ||||||||||||||||    
T  45117915 gtttttttatttctgtttttta 45117936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 94; E-Value: 3e-46
Query Start/End: Original strand, 7 - 128
Target Start/End: Complemental strand, 31993409 - 31993288
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||||||||||||||||||||||| |||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31993409 agaaatagatttaggatcttatgtaataagcttaaaaatcttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 31993310  T
Q  107 gtcttcttatttctgtttttta 128  Q
    ||||| |||||| | |||||||    
T  31993309 gtctttttatttttatttttta 31993288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 94; E-Value: 3e-46
Query Start/End: Original strand, 7 - 128
Target Start/End: Original strand, 38209138 - 38209259
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||||||||||||||||||||||| ||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38209138 agaaatagatttaggatcttatgtaataagcttaaaagacttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 38209237  T
Q  107 gtcttcttatttctgtttttta 128  Q
    ||||| |||||||| |||||||    
T  38209238 gtctttttatttctatttttta 38209259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 93; E-Value: 1e-45
Query Start/End: Original strand, 8 - 128
Target Start/End: Complemental strand, 15111064 - 15110944
Alignment:
Q  8 gaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgtg 107  Q
    ||||| ||||||| ||||||||||||||||||| |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  15111064 gaaatagatttagaatcttatgtaataagcttaaaaagcttgaaaattattgtaatgttttgttcatatattaataaaatgagttgtttttatatttgtg 15110965  T
Q  108 tcttcttatttctgtttttta 128  Q
    |||| ||||||||||||||||    
T  15110964 tctttttatttctgtttttta 15110944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 93; E-Value: 1e-45
Query Start/End: Original strand, 7 - 127
Target Start/End: Complemental strand, 38702938 - 38702818
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||||||||||| |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  38702938 agaaatagatttaggatcttatataataagcctaaaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgatttgtttttatgtttgt 38702839  T
Q  107 gtcttcttatttctgtttttt 127  Q
    ||| | |||||||||||||||    
T  38702838 gtccttttatttctgtttttt 38702818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 91; E-Value: 2e-44
Query Start/End: Original strand, 14 - 128
Target Start/End: Complemental strand, 7940867 - 7940753
Alignment:
Q  14 gatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgtgtcttct 113  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |    
T  7940867 gatttaggatcttatataataagcttaaaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgtatctttt 7940768  T
Q  114 tatttctgtttttta 128  Q
    ||||| | |||||||    
T  7940767 tatttatatttttta 7940753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 90; E-Value: 6e-44
Query Start/End: Original strand, 7 - 128
Target Start/End: Original strand, 13279482 - 13279603
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||||||||||||||||||||||| |||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  13279482 agaaatagatttaggatcttatgtaataagcttaaaaagcttgaaaattaatgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 13279581  T
Q  107 gtcttcttatttctgtttttta 128  Q
     |||| ||| |||||| |||||    
T  13279582 atctttttacttctgtctttta 13279603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 87; E-Value: 4e-42
Query Start/End: Original strand, 7 - 128
Target Start/End: Original strand, 1115910 - 1116032
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaat-aaaatgagttgtttttatgtttg 105  Q
    |||||| |||||||||||||||||||||||| || |||| |||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  1115910 agaaatagatttaggatcttatgtaataagcctaaaaagcttgaaagttattataatgtattgttcatatattaataaaaatgagttgtttttatgtttg 1116009  T
Q  106 tgtcttcttatttctgtttttta 128  Q
    |||||| ||||||||||||||||    
T  1116010 tgtctttttatttctgtttttta 1116032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 83; E-Value: 9e-40
Query Start/End: Original strand, 7 - 128
Target Start/End: Original strand, 15912517 - 15912641
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttt---tatgtt 103  Q
    |||||| |||||||||||||||| ||||| |||| |||| |||||||||||||||||||||||||||||||||||||||| ||||||||||   ||||||    
T  15912517 agaaatagatttaggatcttatggaataaacttaaaaagcttgaaaattattgtaatgtattgttcatatattaataaaacgagttgttttttatatgtt 15912616  T
Q  104 tgtgtcttcttatttctgtttttta 128  Q
    |||||||| ||||||||||||||||    
T  15912617 tgtgtctttttatttctgtttttta 15912641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 82; E-Value: 4e-39
Query Start/End: Original strand, 7 - 128
Target Start/End: Complemental strand, 30490099 - 30489979
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| |||||||||||||||||||||| |||| |||| ||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||| |    
T  30490099 agaaatagatttaggatcttatgtaataa-cttaaaaagcttgaaaattatagtaatgtattgttcatatattaataaaatgaattgtttttatgttttt 30490001  T
Q  107 gtcttcttatttctgtttttta 128  Q
    ||||| |||||| |||||||||    
T  30490000 gtctttttatttatgtttttta 30489979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 78; E-Value: 9e-37
Query Start/End: Original strand, 7 - 128
Target Start/End: Original strand, 43334477 - 43334598
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||| ||||||||||||||| ||| |||| |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  43334477 agaaatagatttagcatcttatgtaataagtttaaaaagcttgaaaattattgtaatgtattgttcatatgttaacaaaatgagttgtttttatgtttgt 43334576  T
Q  107 gtcttcttatttctgtttttta 128  Q
    ||| | |||||  |||||||||    
T  43334577 gtccttttattaatgtttttta 43334598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 73; E-Value: 9e-34
Query Start/End: Original strand, 23 - 127
Target Start/End: Original strand, 16415294 - 16415398
Alignment:
Q  23 tcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgtgtcttcttatttctgt 122  Q
    |||||||||||||||||| |||| || || |||||||||||||||| ||||||| ||||||||||||||||||||||| ||| |||||||||||||||||    
T  16415294 tcttatgtaataagcttaaaaagcttcaacattattgtaatgtattattcatattttaataaaatgagttgtttttatctttttgtcttcttatttctgt 16415393  T
Q  123 ttttt 127  Q
    |||||    
T  16415394 ttttt 16415398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 67; E-Value: 3e-30
Query Start/End: Original strand, 7 - 125
Target Start/End: Complemental strand, 31715226 - 31715108
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| | |||||| |||||||||||||||||| ||||||| |  |||||||||||||||| ||||||||| ||||||||||||| ||||||| ||| |    
T  31715226 agaaatagttttaggttcttatgtaataagcttaaaaagtttcatcattattgtaatgtattattcatatatcaataaaatgagttatttttatcttttt 31715127  T
Q  107 gtcttcttatttctgtttt 125  Q
    ||||| |||||||||||||    
T  31715126 gtctttttatttctgtttt 31715108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 66; E-Value: 1e-29
Query Start/End: Original strand, 15 - 128
Target Start/End: Complemental strand, 1209238 - 1209134
Alignment:
Q  15 atttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgtgtcttctt 114  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||         |||||||||||||| ||    
T  1209238 atttaggatcttatgtaataagcttaaaaagcttgaaaattattgtaatgtattgtttatatattaataaaatg---------tatgtttgtgtcttttt 1209148  T
Q  115 atttctgtttttta 128  Q
    ||||||||||||||    
T  1209147 atttctgtttttta 1209134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 53; E-Value: 8e-22
Query Start/End: Original strand, 64 - 128
Target Start/End: Complemental strand, 16737496 - 16737432
Alignment:
Q  64 gtattgttcatatattaataaaatgagttgtttttatgtttgtgtcttcttatttctgtttttta 128  Q
    |||||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||    
T  16737496 gtattgttcatatattaataaaatgagttggttttacgtttgtgtctttttatttctgtttttta 16737432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 36 - 125
Target Start/End: Original strand, 17230351 - 17230440
Alignment:
Q  36 gcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgtgtcttcttatttctgtttt 125  Q
    ||||| |||| || || |||||| |||||||||  |||||||| ||||||||||||||||||||| ||| ||| || |||||||||||||    
T  17230351 gcttaaaaagcttcaacattattataatgtattagtcatatatcaataaaatgagttgtttttatctttttgtttttttatttctgtttt 17230440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 92
Target Start/End: Original strand, 34950842 - 34950918
Alignment:
Q  16 tttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagtt 92  Q
    |||||| |||||||||||||||||| |||| || || |||||||||||||||| ||  | ||| |||||||||||||    
T  34950842 tttaggttcttatgtaataagcttaaaaagctttaacattattgtaatgtattatttttttatcaataaaatgagtt 34950918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 23 - 90
Target Start/End: Original strand, 18965772 - 18965839
Alignment:
Q  23 tcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgag 90  Q
    |||||||||||||||||  || | || || |||||||||||||| | |||||||||||||||||||||    
T  18965772 tcttatgtaataagcttcaaatgcttcaacattattgtaatgtaatattcatatattaataaaatgag 18965839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 5935580 - 5935528
Alignment:
Q  16 tttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtatt 68  Q
    |||||| |||||||||||||||||| |||| || || ||||||||||||||||    
T  5935580 tttaggttcttatgtaataagcttaaaaagcttcaacattattgtaatgtatt 5935528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 53 - 100
Target Start/End: Original strand, 45537101 - 45537148
Alignment:
Q  53 attattgtaatgtattgttcatatattaataaaatgagttgtttttat 100  Q
    |||||||||||| ||| |||| |||| |||||||||||||||||||||    
T  45537101 attattgtaatgaattattcaaatatcaataaaatgagttgtttttat 45537148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 82 - 127
Target Start/End: Complemental strand, 16251467 - 16251422
Alignment:
Q  82 taaaatgagttgtttttatgtttgtgtcttcttatttctgtttttt 127  Q
    |||||||| |||||||||| |||  |||||||||||||||||||||    
T  16251467 taaaatgatttgtttttatcttttggtcttcttatttctgtttttt 16251422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 105; Significance: 7e-53; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 105; E-Value: 7e-53
Query Start/End: Original strand, 7 - 127
Target Start/End: Complemental strand, 39317949 - 39317829
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39317949 agaaatagatttaggatcttatgtaataagcttaaaaagcttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 39317850  T
Q  107 gtcttcttatttctgtttttt 127  Q
    ||||| |||||||||||||||    
T  39317849 gtctttttatttctgtttttt 39317829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 102; E-Value: 4e-51
Query Start/End: Original strand, 7 - 128
Target Start/End: Complemental strand, 39259633 - 39259512
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  39259633 agaaatagatttaggatcttatgtaataagcttaaaaagcttgaaaattattgtaatgtattgttcctatattaataaaatgagttgtttttatgtttgt 39259534  T
Q  107 gtcttcttatttctgtttttta 128  Q
    ||||| ||||||||||||||||    
T  39259533 gtctttttatttctgtttttta 39259512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 101; E-Value: 2e-50
Query Start/End: Original strand, 7 - 127
Target Start/End: Original strand, 42191564 - 42191684
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  42191564 agaaatagatttaggatcttatgtaataagcttaaaaagcttgaaaattattgtaatgtatcgttcatatattaataaaatgagttgtttttatgtttgt 42191663  T
Q  107 gtcttcttatttctgtttttt 127  Q
    ||||| |||||||||||||||    
T  42191664 gtctttttatttctgtttttt 42191684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 99; E-Value: 3e-49
Query Start/End: Original strand, 14 - 128
Target Start/End: Complemental strand, 8239311 - 8239197
Alignment:
Q  14 gatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgtgtcttct 113  Q
    |||||||||| |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  8239311 gatttaggatattatgtaataagcttaaaaagcttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgtgtctttt 8239212  T
Q  114 tatttctgtttttta 128  Q
    |||||||||||||||    
T  8239211 tatttctgtttttta 8239197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 98; E-Value: 1e-48
Query Start/End: Original strand, 7 - 127
Target Start/End: Original strand, 28249550 - 28249671
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaat-aaaatgagttgtttttatgtttg 105  Q
    |||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  28249550 agaaatagatttaggatcttatgtaataagcttaaaaagcttgaaaattattgtaatgtattgttcatatattaataaaaatgagttgtttttatgtttg 28249649  T
Q  106 tgtcttcttatttctgtttttt 127  Q
    |||||| |||||||||||||||    
T  28249650 tgtctttttatttctgtttttt 28249671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 94; E-Value: 3e-46
Query Start/End: Original strand, 7 - 128
Target Start/End: Complemental strand, 35683347 - 35683226
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||||||||||||||||||||||| |||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  35683347 agaaatagatttaggatcttatgtaataagcttaaaaagctttaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatatttgt 35683248  T
Q  107 gtcttcttatttctgtttttta 128  Q
    ||||| ||||||||| ||||||    
T  35683247 gtctttttatttctgcttttta 35683226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 93; E-Value: 1e-45
Query Start/End: Original strand, 7 - 127
Target Start/End: Original strand, 11076992 - 11077112
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||||||||||||||||||||||| |||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |    
T  11076992 agaaatagatttaggatcttatgtaataagcttaaaaagcttgaaaattattgtattgtattgttcatatattaataaaatgagttgtttttatgttttt 11077091  T
Q  107 gtcttcttatttctgtttttt 127  Q
    ||| | |||||||||||||||    
T  11077092 gtcattttatttctgtttttt 11077112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 90; E-Value: 6e-44
Query Start/End: Original strand, 7 - 128
Target Start/End: Original strand, 6348121 - 6348242
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||||||||||| ||||||||||| |||| ||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||    
T  6348121 agaaatagatttaggatcttatataataagcttaaaaagcttgaaaattattgtaatgtatagttcatatattaataaaatgagttatttttatgtttgt 6348220  T
Q  107 gtcttcttatttctgtttttta 128  Q
    ||| | ||||||||||||||||    
T  6348221 gtccttttatttctgtttttta 6348242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 90; E-Value: 6e-44
Query Start/End: Original strand, 7 - 128
Target Start/End: Complemental strand, 23143458 - 23143337
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||| ||||||||||||||||||| |||  |||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||    
T  23143458 agaaatagatttagaatcttatgtaataagcttaaaaaacttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatatctgt 23143359  T
Q  107 gtcttcttatttctgtttttta 128  Q
    ||||| ||||||||||||||||    
T  23143358 gtctttttatttctgtttttta 23143337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 90; E-Value: 6e-44
Query Start/End: Original strand, 7 - 128
Target Start/End: Complemental strand, 31700359 - 31700238
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||||||||||||||||||||||| ||||  ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  31700359 agaaatagatttaggatcttatgtaataagcttaaaaagcctgaaaattattataatgtattgttcatatattaataaaatgagttgtttttatgtttgt 31700260  T
Q  107 gtcttcttatttctgtttttta 128  Q
    ||||| |||| ||||| |||||    
T  31700259 gtctttttatatctgtctttta 31700238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 90; E-Value: 6e-44
Query Start/End: Original strand, 7 - 128
Target Start/End: Original strand, 32338637 - 32338758
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| |||||| ||||||||||||||| |||  |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  32338637 agaaatagatttaagatcttatgtaataaactttaaaagcttgaaaattattgtaatgtattgttgatatattaataaaatgagttgtttttatgtttgt 32338736  T
Q  107 gtcttcttatttctgtttttta 128  Q
    ||||| ||||||||||||||||    
T  32338737 gtctttttatttctgtttttta 32338758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 89; E-Value: 2e-43
Query Start/End: Original strand, 7 - 127
Target Start/End: Complemental strand, 13545585 - 13545465
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||||||||||||||||||||||| |||| |||||||||||| |||||||||||||||||||||| |||||||||||||||||| |||||    
T  13545585 agaaatagatttaggatcttatgtaataagcttaaaaagcttgaaaattattttaatgtattgttcatatattaaaaaaatgagttgtttttatatttgt 13545486  T
Q  107 gtcttcttatttctgtttttt 127  Q
    ||||| |||||| ||||||||    
T  13545485 gtctttttatttatgtttttt 13545465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 89; E-Value: 2e-43
Query Start/End: Original strand, 7 - 127
Target Start/End: Original strand, 13678888 - 13679008
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||||||||||||||||||||||| |||| |||||||||||| |||||||||||||||||||||| |||||||||||||||||| |||||    
T  13678888 agaaatagatttaggatcttatgtaataagcttaaaaagcttgaaaattattttaatgtattgttcatatattaaaaaaatgagttgtttttatatttgt 13678987  T
Q  107 gtcttcttatttctgtttttt 127  Q
    ||||| |||||| ||||||||    
T  13678988 gtctttttatttatgtttttt 13679008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 86; E-Value: 2e-41
Query Start/End: Original strand, 7 - 128
Target Start/End: Original strand, 20092683 - 20092804
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| |||||| ||||||||| |||||||||| |||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||    
T  20092683 agaaatagatttaagatcttatgcaataagcttaaaaagcttgaaaattattgtattgtattgttcatatattaataaaatgagttgtttttatatttgt 20092782  T
Q  107 gtcttcttatttctgtttttta 128  Q
    ||||| |||||||||| |||||    
T  20092783 gtctttttatttctgtatttta 20092804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 86; E-Value: 2e-41
Query Start/End: Original strand, 7 - 128
Target Start/End: Original strand, 37099129 - 37099250
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| |||||||||||| |||||||||| ||| |||  |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  37099129 agaaatagatttaggatctgatgtaataaggttaaaaaacttgaaaattattgtaatgtattgttcatatattaataaaatgagttatttttatgtttgt 37099228  T
Q  107 gtcttcttatttctgtttttta 128  Q
    ||||| |||||||| |||||||    
T  37099229 gtctttttatttctatttttta 37099250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 83; E-Value: 9e-40
Query Start/End: Original strand, 7 - 128
Target Start/End: Original strand, 24834980 - 24835099
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| |||||| |||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||  |    
T  24834980 agaaatagatttaagatcttatgtaataagcttaaaaagcttgaaaattattgtaatgtattgttcatatattaataaaatgggttgtttttatgtt--t 24835077  T
Q  107 gtcttcttatttctgtttttta 128  Q
    ||||| |||||||| |||||||    
T  24835078 gtctttttatttctatttttta 24835099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 83; E-Value: 9e-40
Query Start/End: Original strand, 7 - 128
Target Start/End: Complemental strand, 40104580 - 40104459
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaa-gtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttg 105  Q
    |||||| ||||||||||||||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  40104580 agaaatagatttaggatcttatgtaataagcttaaaaaagcttgaaaattattgtaatgtattgttcatatattaataaaattagttg-ttttatgtttg 40104482  T
Q  106 tgtcttcttatttctgtttttta 128  Q
    |||||| ||||||||||| ||||    
T  40104481 tgtctttttatttctgttattta 40104459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 78; E-Value: 9e-37
Query Start/End: Original strand, 7 - 128
Target Start/End: Complemental strand, 43097857 - 43097737
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| |||||||||| |||||||||||||||| |||| ||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||    
T  43097857 agaaatagatttaggatattatgtaataagcttaaaaagcttgaaaattattgcaatgtattgttcatatattaataaaatgagttg-ttttatgtttgt 43097759  T
Q  107 gtcttcttatttctgtttttta 128  Q
     |||| ||| || |||||||||    
T  43097758 ctctttttaattttgtttttta 43097737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 71; E-Value: 1e-32
Query Start/End: Original strand, 7 - 121
Target Start/End: Original strand, 225475 - 225589
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| |||||||| |||||||||||||||||| |||| || || ||||||||||||||||| |||||||||||||||||||||||||||||| ||| |    
T  225475 agaaatagatttaggttcttatgtaataagcttaaaaagcttcaacattattgtaatgtattgctcatatattaataaaatgagttgtttttatcttttt 225574  T
Q  107 gtcttcttatttctg 121  Q
    || || |||||||||    
T  225575 gtatttttatttctg 225589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 71; E-Value: 1e-32
Query Start/End: Original strand, 7 - 128
Target Start/End: Complemental strand, 585726 - 585613
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||||||||||||||||||||||         ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  585726 agaaatagatttaggatcttatgtaataagctt---------gaaaattattgtaatttattgttcatatattaataaaatgagttgtttttatgtttgt 585636  T
Q  107 gtc-ttcttatttctgtttttta 128  Q
    ||| || ||||||||||||||||    
T  585635 gtcttttttatttctgtttttta 585613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 71; E-Value: 1e-32
Query Start/End: Original strand, 7 - 128
Target Start/End: Original strand, 628197 - 628310
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||||||||||||||||||||||         ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  628197 agaaatagatttaggatcttatgtaataagctt---------gaaaattattgtaatttattgttcatatattaataaaatgagttgtttttatgtttgt 628287  T
Q  107 gtc-ttcttatttctgtttttta 128  Q
    ||| || ||||||||||||||||    
T  628288 gtcttttttatttctgtttttta 628310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 71; E-Value: 1e-32
Query Start/End: Original strand, 7 - 121
Target Start/End: Original strand, 701888 - 702002
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| |||||||| |||||||||||||||||| |||| || || ||||||||||||||||| |||||||||||||||||||||||||||||| ||| |    
T  701888 agaaatagatttaggttcttatgtaataagcttaaaaagcttcaacattattgtaatgtattgctcatatattaataaaatgagttgtttttatcttttt 701987  T
Q  107 gtcttcttatttctg 121  Q
    || || |||||||||    
T  701988 gtatttttatttctg 702002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 71; E-Value: 1e-32
Query Start/End: Original strand, 7 - 121
Target Start/End: Original strand, 739098 - 739212
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| |||||||| |||||||||||||||||| |||| || || ||||||||||||||||| |||||||||||||||||||||||||||||| ||| |    
T  739098 agaaatagatttaggttcttatgtaataagcttaaaaagcttcaacattattgtaatgtattgctcatatattaataaaatgagttgtttttatcttttt 739197  T
Q  107 gtcttcttatttctg 121  Q
    || || |||||||||    
T  739198 gtatttttatttctg 739212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 71; E-Value: 1e-32
Query Start/End: Original strand, 7 - 121
Target Start/End: Original strand, 862993 - 863107
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| |||||||| |||||||||||||||||| |||| || || ||||||||||||||||| |||||||||||||||||||||||||||||| ||| |    
T  862993 agaaatagatttaggttcttatgtaataagcttaaaaagcttcaacattattgtaatgtattgctcatatattaataaaatgagttgtttttatcttttt 863092  T
Q  107 gtcttcttatttctg 121  Q
    || || |||||||||    
T  863093 gtatttttatttctg 863107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 55; E-Value: 5e-23
Query Start/End: Original strand, 15 - 81
Target Start/End: Complemental strand, 42131247 - 42131181
Alignment:
Q  15 atttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaa 81  Q
    ||||| |||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  42131247 atttaagatcttatgtaataagcttaaaaagcttgaaaattattgtaatgtattgttcatatattaa 42131181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 76 - 128
Target Start/End: Complemental strand, 42130995 - 42130943
Alignment:
Q  76 tattaataaaatgagttgtttttatgtttgtgtcttcttatttctgtttttta 128  Q
    |||||| |||||||||||||||||||||| |||||| ||||||||||||||||    
T  42130995 tattaaaaaaatgagttgtttttatgtttatgtctttttatttctgtttttta 42130943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 23 - 128
Target Start/End: Complemental strand, 4257991 - 4257886
Alignment:
Q  23 tcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgtg-tcttcttatttctg 121  Q
    |||||||||||||||||| |||  || || ||||||||||  |||| ||||||||||||||| |||| || ||||||| |||||| |||| ||| |||||    
T  4257991 tcttatgtaataagcttaaaaaacttcaacattattgtaac-tattattcatatattaataatatgatttctttttatctttgtgttctttttaattctg 4257893  T
Q  122 tttttta 128  Q
    |||||||    
T  4257892 tttttta 4257886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 82 - 125
Target Start/End: Complemental strand, 38222549 - 38222506
Alignment:
Q  82 taaaatgagttgtttttatgtttgtgtcttcttatttctgtttt 125  Q
    ||||||||||||||||||| ||| |||||| |||||||| ||||    
T  38222549 taaaatgagttgtttttatctttttgtctttttatttctatttt 38222506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 102; Significance: 4e-51; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 102; E-Value: 4e-51
Query Start/End: Original strand, 7 - 128
Target Start/End: Original strand, 44866845 - 44866966
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44866845 agaaatagatttaggatcttatgtaataagcttaaaaagcttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 44866944  T
Q  107 gtcttcttatttctgtttttta 128  Q
    ||||| ||||||||||| ||||    
T  44866945 gtctttttatttctgttattta 44866966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 101; E-Value: 2e-50
Query Start/End: Original strand, 15 - 127
Target Start/End: Complemental strand, 29330058 - 29329946
Alignment:
Q  15 atttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgtgtcttctt 114  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  29330058 atttaggatcttatgtaataagcttaaaaagcttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgtgtcttttt 29329959  T
Q  115 atttctgtttttt 127  Q
    |||||||||||||    
T  29329958 atttctgtttttt 29329946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 98; E-Value: 1e-48
Query Start/End: Original strand, 7 - 128
Target Start/End: Original strand, 35795263 - 35795384
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||||||||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  35795263 agaaatagatttaggatcttatgtaataagcttaaaaagcttgaaaatttttgtaatgtattgttcatatattaataaaatgagttgtttttatgttagt 35795362  T
Q  107 gtcttcttatttctgtttttta 128  Q
    ||||| ||||||||||||||||    
T  35795363 gtctttttatttctgtttttta 35795384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 96; E-Value: 2e-47
Query Start/End: Original strand, 9 - 128
Target Start/End: Complemental strand, 7253038 - 7252919
Alignment:
Q  9 aaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgtgt 108  Q
    |||| ||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  7253038 aaatagatttaggatcttatgtaataagcttaaaaagcttgaaaattattgtaatgtattgtgcatatattaataaaatgagttgtttttatgtttgtgt 7252939  T
Q  109 cttcttatttctgtttttta 128  Q
    ||| | ||||||||||||||    
T  7252938 cttttcatttctgtttttta 7252919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 96; E-Value: 2e-47
Query Start/End: Original strand, 9 - 128
Target Start/End: Complemental strand, 14815984 - 14815865
Alignment:
Q  9 aaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgtgt 108  Q
    |||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14815984 aaatgggtttaggatcttatgtaataagcttaaaaagcttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgtgt 14815885  T
Q  109 cttcttatttctgtttttta 128  Q
    ||| ||| |||||| |||||    
T  14815884 ctttttaattctgtctttta 14815865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 96; E-Value: 2e-47
Query Start/End: Original strand, 9 - 128
Target Start/End: Complemental strand, 15262979 - 15262860
Alignment:
Q  9 aaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgtgt 108  Q
    |||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15262979 aaatgggtttaggatcttatgtaataagcttaaaaagcttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgtgt 15262880  T
Q  109 cttcttatttctgtttttta 128  Q
    ||| ||| |||||| |||||    
T  15262879 ctttttaattctgtctttta 15262860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 94; E-Value: 3e-46
Query Start/End: Original strand, 7 - 128
Target Start/End: Complemental strand, 25528439 - 25528318
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| |||| |||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||    
T  25528439 agaaatagattgaggatcttatgtaataagtttaaaaagtttgaaaattattgtaatgtattattcatatattaataaaatgagttatttttatgtttgt 25528340  T
Q  107 gtcttcttatttctgtttttta 128  Q
    ||||| ||||||||||||||||    
T  25528339 gtctttttatttctgtttttta 25528318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 94; E-Value: 3e-46
Query Start/End: Original strand, 7 - 128
Target Start/End: Original strand, 26794130 - 26794251
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||| ||||||||||||||| ||  |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26794130 agaaatagatttagcatcttatgtaataagattcaaaagcttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 26794229  T
Q  107 gtcttcttatttctgtttttta 128  Q
    ||||| ||||||||||||||||    
T  26794230 gtctttttatttctgtttttta 26794251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 94; E-Value: 3e-46
Query Start/End: Original strand, 15 - 128
Target Start/End: Complemental strand, 34847146 - 34847033
Alignment:
Q  15 atttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgtgtcttctt 114  Q
    ||||||||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  34847146 atttaggatcttatgtaataaccttaaaaagcttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgtgtcttttt 34847047  T
Q  115 atttctgtttttta 128  Q
    ||||| ||||||||    
T  34847046 atttcagtttttta 34847033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 94; E-Value: 3e-46
Query Start/End: Original strand, 7 - 128
Target Start/End: Original strand, 46255663 - 46255784
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||||||||||||||||||||||| |||  ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  46255663 agaaatagatttaggatcttatgtaataagcttaaaaaacttgaaaattattgtaatgtattgttcatatattaataaaatgagttgattttatgtttgt 46255762  T
Q  107 gtcttcttatttctgtttttta 128  Q
    ||| | ||||||||||||||||    
T  46255763 gtcattttatttctgtttttta 46255784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 93; E-Value: 1e-45
Query Start/End: Original strand, 7 - 127
Target Start/End: Complemental strand, 36311429 - 36311309
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||    
T  36311429 agaaatagatttaggatcttatgtaataagcttaaaaagcttgaaaattattgtaatgtattgttcatatattattaaaatggattgtttttatgtttgt 36311330  T
Q  107 gtcttcttatttctgtttttt 127  Q
    ||||| |||||||||||||||    
T  36311329 gtctttttatttctgtttttt 36311309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 91; E-Value: 2e-44
Query Start/End: Original strand, 7 - 128
Target Start/End: Original strand, 33951741 - 33951863
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaa-gtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttg 105  Q
    |||||| ||||||||||||||||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33951741 agaaatagatttaggatcttatgtaataagcttaaaaaagcttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttg 33951840  T
Q  106 tgtcttcttatttctgtttttta 128  Q
    |||||| |||||| ||| |||||    
T  33951841 tgtctttttatttatgtctttta 33951863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 90; E-Value: 6e-44
Query Start/End: Original strand, 7 - 128
Target Start/End: Complemental strand, 35582794 - 35582673
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||| |||||||||||||| |||| |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  35582794 agaaatagatttagtatcttatgtaataaacttaaaaagcttgaaaattattgtaatgtattgtttatatattaataaaatgagttgtttttatgtttgt 35582695  T
Q  107 gtcttcttatttctgtttttta 128  Q
    ||| | ||||||||||||||||    
T  35582694 gtcattttatttctgtttttta 35582673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 90; E-Value: 6e-44
Query Start/End: Original strand, 7 - 128
Target Start/End: Complemental strand, 38247467 - 38247346
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| |||||| ||| |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||    
T  38247467 agaaatagatttatgatattatgtaataagcttaaaaagcttgaaaattattgtaatgtattgttcatatattaataaaatcagttatttttatgtttgt 38247368  T
Q  107 gtcttcttatttctgtttttta 128  Q
    ||||| ||||||||||||||||    
T  38247367 gtctttttatttctgtttttta 38247346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 90; E-Value: 6e-44
Query Start/End: Original strand, 7 - 120
Target Start/End: Original strand, 43458951 - 43459064
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| |||||||||||||||||| |||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43458951 agaaatagatttaggatcttatgtagtaagtttaaaaagcttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 43459050  T
Q  107 gtcttcttatttct 120  Q
    ||||| ||||||||    
T  43459051 gtctttttatttct 43459064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 89; E-Value: 2e-43
Query Start/End: Original strand, 7 - 127
Target Start/End: Complemental strand, 43745031 - 43744911
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| |||||||||||||||||||||| |||| |||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  43745031 agaaatagatttaggatcttatgtaataatcttaaaaagcttaaaaattattgtaatgtattgttcatatattaataaaatcagttgtttttatgtttgt 43744932  T
Q  107 gtcttcttatttctgtttttt 127  Q
     |||| |||||||||||||||    
T  43744931 atctttttatttctgtttttt 43744911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 86; E-Value: 2e-41
Query Start/End: Original strand, 7 - 128
Target Start/End: Complemental strand, 15030370 - 15030249
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||| ||||||||||||||||||| |||| |||||||||||||| | |||||||||||||||||||||||| ||||| ||||||||||||    
T  15030370 agaaatagatttagcatcttatgtaataagcttaaaaaggttgaaaattattgtcacgtattgttcatatattaataaaataagttgcttttatgtttgt 15030271  T
Q  107 gtcttcttatttctgtttttta 128  Q
    ||||| ||||||||||||||||    
T  15030270 gtctttttatttctgtttttta 15030249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 83; E-Value: 9e-40
Query Start/End: Original strand, 7 - 128
Target Start/End: Original strand, 114093 - 114215
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttg-tttttatgtttg 105  Q
    |||||| ||||||||||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  114093 agaaattgatttaggatcttatataataagcttaaaaagcttgaaaattattgtaatgtattgttcatatattaataaaatcagttgttttttatgtttg 114192  T
Q  106 tgtcttcttatttctgtttttta 128  Q
    |||| | |||||| |||||||||    
T  114193 tgtcattttatttttgtttttta 114215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 83; E-Value: 9e-40
Query Start/End: Original strand, 7 - 128
Target Start/End: Original strand, 41793497 - 41793619
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgttttt-atgtttg 105  Q
    |||||| |||||| ||||||||||||||| |||| |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||    
T  41793497 agaaatagatttatgatcttatgtaataaacttaaaaagcttgaaaattattgtaatgtattgttcctatattaataaaatgagttgtttttaatgtttg 41793596  T
Q  106 tgtcttcttatttctgtttttta 128  Q
    |||| | ||||||||||||||||    
T  41793597 tgtcgttttatttctgtttttta 41793619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 73; E-Value: 9e-34
Query Start/End: Original strand, 7 - 118
Target Start/End: Complemental strand, 32523976 - 32523864
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgag-ttgtttttatgtttg 105  Q
    |||||| ||||| ||||||||| ||||||||||| |||  |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||    
T  32523976 agaaatagatttgggatcttatataataagcttaaaaaacttgaaaattattgtaatgtattgttcatatattaataaaatgagtttttttttatgtttg 32523877  T
Q  106 tgtcttcttattt 118  Q
    |||||| ||||||    
T  32523876 tgtctttttattt 32523864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 61; E-Value: 1e-26
Query Start/End: Original strand, 47 - 127
Target Start/End: Original strand, 37971147 - 37971227
Alignment:
Q  47 ttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgtgtcttcttatttctgtttttt 127  Q
    |||||| || ||||||||||||||||||||||||||||||| |||||||||||||||||||||||  ||||||||||||||    
T  37971147 ttgaaattttttgtaatgtattgttcatatattaataaaatcagttgtttttatgtttgtgtctttctatttctgtttttt 37971227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 60; E-Value: 5e-26
Query Start/End: Original strand, 7 - 98
Target Start/End: Original strand, 8166532 - 8166623
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgttttt 98  Q
    |||||| |||||||| |||||||||||||||||| |||  || || |||||||||||||||||||||||||||||||||||||||| |||||    
T  8166532 agaaatagatttaggttcttatgtaataagcttaaaaaacttcaacattattgtaatgtattgttcatatattaataaaatgagtttttttt 8166623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 59; E-Value: 2e-25
Query Start/End: Original strand, 7 - 92
Target Start/End: Original strand, 38001034 - 38001117
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagtt 92  Q
    |||||| ||||||||||||||||||||||||||| |||| ||  ||||||||||||||||||||||||||||||||||||| ||||    
T  38001034 agaaatagatttaggatcttatgtaataagcttaaaaagctt--aaattattgtaatgtattgttcatatattaataaaatcagtt 38001117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 55; E-Value: 5e-23
Query Start/End: Original strand, 7 - 125
Target Start/End: Complemental strand, 24686533 - 24686415
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| | |||||| |||||||||| ||||||| |||| || || |||||||||||||||| |||| |||| |||||||||| |||||||||| ||| |    
T  24686533 agaaatagttttaggttcttatgtaaaaagcttaaaaagcttcaacattattgtaatgtattattcaaatatcaataaaatgatttgtttttatcttttt 24686434  T
Q  107 gtcttcttatttctgtttt 125  Q
    | ||| |||||||||||||    
T  24686433 gactttttatttctgtttt 24686415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 52; E-Value: 3e-21
Query Start/End: Original strand, 42 - 97
Target Start/End: Original strand, 35965298 - 35965353
Alignment:
Q  42 aaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttt 97  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35965298 aaagcttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttt 35965353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 102; Significance: 4e-51; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 102; E-Value: 4e-51
Query Start/End: Original strand, 7 - 128
Target Start/End: Complemental strand, 4189218 - 4189097
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  4189218 agaaatagatttaggatcttatgtaataagcttaaaaagcttgaaaattattgtaatgtattgttcatatattaataaaatgagttatttttatgtttgt 4189119  T
Q  107 gtcttcttatttctgtttttta 128  Q
    ||||| ||||||||||||||||    
T  4189118 gtctttttatttctgtttttta 4189097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 102; E-Value: 4e-51
Query Start/End: Original strand, 7 - 128
Target Start/End: Complemental strand, 9035430 - 9035309
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  9035430 agaaatagatttaggatcttatgtaataagcttaaaaagcttgaaaattattgtaatgtatttttcatatattaataaaatgagttgtttttatgtttgt 9035331  T
Q  107 gtcttcttatttctgtttttta 128  Q
    ||||| ||||||||||||||||    
T  9035330 gtctttttatttctgtttttta 9035309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 102; E-Value: 4e-51
Query Start/End: Original strand, 7 - 128
Target Start/End: Original strand, 13753078 - 13753199
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||| ||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13753078 agaaatagatttagcatcttatgtaataagcttaaaaagcttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 13753177  T
Q  107 gtcttcttatttctgtttttta 128  Q
    ||||| ||||||||||||||||    
T  13753178 gtctttttatttctgtttttta 13753199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 102; E-Value: 4e-51
Query Start/End: Original strand, 7 - 128
Target Start/End: Complemental strand, 28780117 - 28779996
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28780117 agaaatagatttaggatcttatgtgataagcttaaaaagcttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 28780018  T
Q  107 gtcttcttatttctgtttttta 128  Q
    ||||| ||||||||||||||||    
T  28780017 gtctttttatttctgtttttta 28779996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 102; E-Value: 4e-51
Query Start/End: Original strand, 7 - 128
Target Start/End: Complemental strand, 38217615 - 38217494
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38217615 agaaatagatttaggatcttatgtaataagcttaaaaagcttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 38217516  T
Q  107 gtcttcttatttctgtttttta 128  Q
    ||||| |||||||| |||||||    
T  38217515 gtctttttatttctatttttta 38217494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 101; E-Value: 2e-50
Query Start/End: Original strand, 7 - 127
Target Start/End: Original strand, 1603589 - 1603709
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1603589 agaaatagatttaggatcttatgtaataagcttaaaaagcttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 1603688  T
Q  107 gtcttcttatttctgtttttt 127  Q
    ||||| |||||| ||||||||    
T  1603689 gtctttttatttttgtttttt 1603709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 98; E-Value: 1e-48
Query Start/End: Original strand, 15 - 128
Target Start/End: Original strand, 5419642 - 5419755
Alignment:
Q  15 atttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgtgtcttctt 114  Q
    |||||||||||||||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  5419642 atttaggatcttatgtaataggcttaaaaagcttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgtgtcttttt 5419741  T
Q  115 atttctgtttttta 128  Q
    ||||||||||||||    
T  5419742 atttctgtttttta 5419755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 98; E-Value: 1e-48
Query Start/End: Original strand, 7 - 128
Target Start/End: Original strand, 31093905 - 31094026
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  31093905 agaaatagatttaggatcttatgtaataagcttaaaaagcttgaaaattattgtaatgtattgtttatatattaataaaatgagttgtttttatgtttgt 31094004  T
Q  107 gtcttcttatttctgtttttta 128  Q
    ||||| |||||| |||||||||    
T  31094005 gtctttttatttttgtttttta 31094026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 98; E-Value: 1e-48
Query Start/End: Original strand, 7 - 128
Target Start/End: Original strand, 45229875 - 45229996
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  45229875 agaaatagatttaggatcttatgtaataagcttaaaaagcttgaaaattattgtaatgtattgtttatatattaataaaatgagttgtttttatgtttgt 45229974  T
Q  107 gtcttcttatttctgtttttta 128  Q
    || || ||||||||||||||||    
T  45229975 gtttttttatttctgtttttta 45229996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 98; E-Value: 1e-48
Query Start/End: Original strand, 7 - 128
Target Start/End: Original strand, 47605203 - 47605324
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| | ||||| ||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47605203 agaaatagttttagcatcttatgtaataagcttaaaaagcttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 47605302  T
Q  107 gtcttcttatttctgtttttta 128  Q
    ||||| ||||||||||||||||    
T  47605303 gtctttttatttctgtttttta 47605324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 98; E-Value: 1e-48
Query Start/End: Original strand, 7 - 128
Target Start/End: Complemental strand, 47984262 - 47984141
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  47984262 agaaatagatttaggatcttatgtaataagcttaaaaagcttgaaaattattgtaatgtattgttcatatattaataaaataagttgtttttatgtttgt 47984163  T
Q  107 gtcttcttatttctgtttttta 128  Q
    ||||| |||| |||||||||||    
T  47984162 gtctttttatctctgtttttta 47984141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 98; E-Value: 1e-48
Query Start/End: Original strand, 7 - 128
Target Start/End: Original strand, 53513097 - 53513218
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||| ||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53513097 agaaatagatttagcatcttatgtaataagcttaaaaagcttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 53513196  T
Q  107 gtcttcttatttctgtttttta 128  Q
    || || ||||||||||||||||    
T  53513197 gtttttttatttctgtttttta 53513218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 98; E-Value: 1e-48
Query Start/End: Original strand, 7 - 128
Target Start/End: Complemental strand, 55609856 - 55609735
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||| ||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55609856 agaaatagatttagcatcttatgtaataagcttaaaaagcttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 55609757  T
Q  107 gtcttcttatttctgtttttta 128  Q
    | ||| ||||||||||||||||    
T  55609756 ggctttttatttctgtttttta 55609735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 97; E-Value: 4e-48
Query Start/End: Original strand, 7 - 127
Target Start/End: Original strand, 6964258 - 6964378
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  6964258 agaaatagatttaggatcttatgtaataagcttaaaaagcttgaaaattattgtaatgtattgtttatatattaataaaatgagttgtttttatgtttgt 6964357  T
Q  107 gtcttcttatttctgtttttt 127  Q
    ||||| |||||| ||||||||    
T  6964358 gtctttttatttatgtttttt 6964378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 97; E-Value: 4e-48
Query Start/End: Original strand, 8 - 128
Target Start/End: Original strand, 51889976 - 51890096
Alignment:
Q  8 gaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgtg 107  Q
    ||||| ||||||| ||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51889976 gaaatagatttagcatcttatgtaataagcttaaaaagcttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgtg 51890075  T
Q  108 tcttcttatttctgtttttta 128  Q
    |||| |||||| |||||||||    
T  51890076 tctttttatttttgtttttta 51890096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 96; E-Value: 2e-47
Query Start/End: Original strand, 7 - 126
Target Start/End: Original strand, 35159526 - 35159645
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||  ||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35159526 agaaatagatttaacatcttatgtaataagcttaaaaagcttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 35159625  T
Q  107 gtcttcttatttctgttttt 126  Q
    ||||| ||||||||||||||    
T  35159626 gtctttttatttctgttttt 35159645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 96; E-Value: 2e-47
Query Start/End: Original strand, 7 - 126
Target Start/End: Complemental strand, 35319209 - 35319090
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||||||||||||||||||||||| |||  ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  35319209 agaaatagatttaggatcttatgtaataagcttaaaaaacttgaaaattattgtaatgtattgttcaaatattaataaaatgagttgtttttatgtttgt 35319110  T
Q  107 gtcttcttatttctgttttt 126  Q
    ||||| ||||||||||||||    
T  35319109 gtctttttatttctgttttt 35319090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 95; E-Value: 7e-47
Query Start/End: Original strand, 14 - 128
Target Start/End: Original strand, 16024679 - 16024793
Alignment:
Q  14 gatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgtgtcttct 113  Q
    |||||||||||||||||||||||| || |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  16024679 gatttaggatcttatgtaataagcataaaaagcttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgtgtctttt 16024778  T
Q  114 tatttctgtttttta 128  Q
    ||||| |||||||||    
T  16024779 tatttatgtttttta 16024793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 94; E-Value: 3e-46
Query Start/End: Original strand, 7 - 128
Target Start/End: Complemental strand, 167860 - 167739
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||||||||||||||||||||||| |||| ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  167860 agaaatagatttaggatcttatgtaataagcttaaaaagcttgaaaattattgtactgtattgttcatatattaataaaatgaattgtttttatgtttgt 167761  T
Q  107 gtcttcttatttctgtttttta 128  Q
    ||||| |||||||||| |||||    
T  167760 gtctttttatttctgtctttta 167739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 94; E-Value: 3e-46
Query Start/End: Original strand, 7 - 128
Target Start/End: Complemental strand, 52416263 - 52416143
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||| ||||||||||||||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52416263 agaaatagatttagaatcttatgtaataagcttacaaactt-gaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 52416165  T
Q  107 gtcttcttatttctgtttttta 128  Q
    ||||| ||||||||||||||||    
T  52416164 gtctttttatttctgtttttta 52416143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 94; E-Value: 3e-46
Query Start/End: Original strand, 7 - 120
Target Start/End: Original strand, 52502214 - 52502327
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  52502214 agaaatagatttaggatcttatgtaataagcttaaaaagcttgaaaattattgtaatgtattgttcatatattaataaaatgagtcgtttttatgtttgt 52502313  T
Q  107 gtcttcttatttct 120  Q
    ||||| ||||||||    
T  52502314 gtctttttatttct 52502327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 93; E-Value: 1e-45
Query Start/End: Original strand, 7 - 127
Target Start/End: Original strand, 40728835 - 40728955
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| |||||||||||||||||||||| |||| |||  ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  40728835 agaaatagatttaggatcttatgtaataaacttaaaaaacttgaaaattattgtaatgtattgttcatatattaataaaatgagttgttattatgtttgt 40728934  T
Q  107 gtcttcttatttctgtttttt 127  Q
    ||||| |||||||||||||||    
T  40728935 gtctttttatttctgtttttt 40728955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 93; E-Value: 1e-45
Query Start/End: Original strand, 7 - 127
Target Start/End: Original strand, 51539420 - 51539539
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  51539420 agaaatagatttaggatcttatgtaataagctta-aaagcttgaaaattattgtaatttattgttcatatattaataaaatgagttgtttttatgtttgt 51539518  T
Q  107 gtcttcttatttctgtttttt 127  Q
    ||||| |||||||| ||||||    
T  51539519 gtctttttatttctatttttt 51539539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 91; E-Value: 2e-44
Query Start/End: Original strand, 14 - 128
Target Start/End: Original strand, 56318593 - 56318707
Alignment:
Q  14 gatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgtgtcttct 113  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| || |||||||| |||||||||||||||||||| |||||||||||||||||| |    
T  56318593 gatttaggatcttatgtaataagcttaaaaagtttgaaaattattgaaaagtattgtttatatattaataaaatgagttatttttatgtttgtgtctttt 56318692  T
Q  114 tatttctgtttttta 128  Q
    |||||||||||||||    
T  56318693 tatttctgtttttta 56318707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 90; E-Value: 6e-44
Query Start/End: Original strand, 7 - 120
Target Start/End: Original strand, 4353396 - 4353509
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||    
T  4353396 agaaatagatttaggatcttatgtaataagcttaaaaagcttgaaaattattgtaatgtattgttcatatattaataaaatcagttttttttatgtttgt 4353495  T
Q  107 gtcttcttatttct 120  Q
    ||||| ||||||||    
T  4353496 gtctttttatttct 4353509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 89; E-Value: 2e-43
Query Start/End: Original strand, 7 - 127
Target Start/End: Complemental strand, 15542152 - 15542032
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||||||||||||||||||||||| |||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15542152 agaaatagatttaggatcttatgtaataagcttaaaaaacttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 15542053  T
Q  107 gtcttcttatttctgtttttt 127  Q
      ||| |||||| ||||||||    
T  15542052 cgctttttatttatgtttttt 15542032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 89; E-Value: 2e-43
Query Start/End: Original strand, 7 - 127
Target Start/End: Complemental strand, 38550604 - 38550484
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| |||||| ||||||||||| |||||||| |||| |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||    
T  38550604 agaaatagatttaagatcttatgtattaagcttaaaaagcttgaaaattattataatgtattgttcatatattaataaaatgatttgtttttatgtttgt 38550505  T
Q  107 gtcttcttatttctgtttttt 127  Q
    ||||| |||||||||||||||    
T  38550504 gtctttttatttctgtttttt 38550484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 88; E-Value: 1e-42
Query Start/End: Original strand, 9 - 128
Target Start/End: Complemental strand, 40690747 - 40690628
Alignment:
Q  9 aaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgtgt 108  Q
    |||| ||||||| ||||||||||||||||||| |||  |||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  40690747 aaatagatttagcatcttatgtaataagcttaaaaaacttgaaaattattgtaatgtattgttcgtatattaataaaatgagttgtttttatgattgtgt 40690648  T
Q  109 cttcttatttctgtttttta 128  Q
    ||| ||||||||||||||||    
T  40690647 ctttttatttctgtttttta 40690628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 88; E-Value: 1e-42
Query Start/End: Original strand, 7 - 118
Target Start/End: Original strand, 49375122 - 49375233
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  49375122 agaaatagatttaggatcttatgtaataagcttaaaaagcttgaaaattattgtaatgtattgttcatatattaataaaatgagttgcttttatgtttgt 49375221  T
Q  107 gtcttcttattt 118  Q
    || || ||||||    
T  49375222 gtatttttattt 49375233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 86; E-Value: 2e-41
Query Start/End: Original strand, 7 - 128
Target Start/End: Complemental strand, 38988429 - 38988308
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||||||||||||||||||||||| |||  ||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  38988429 agaaatagatttaggatcttatgtaataagcttaaaaaacttgaaaattattgtaatgtattgttcatatattaataaaatcagctgtttttatgtttgt 38988330  T
Q  107 gtcttcttatttctgtttttta 128  Q
     |||| ||||||||| ||||||    
T  38988329 ctctttttatttctgcttttta 38988308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 85; E-Value: 6e-41
Query Start/End: Original strand, 7 - 111
Target Start/End: Complemental strand, 45657255 - 45657151
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  45657255 agaaatagatttaggatcttatgtaataagcttaaaaagcttgaaaattattgtaatgtattgttcatatattaataatatgaattgtttttatgtttgt 45657156  T
Q  107 gtctt 111  Q
    |||||    
T  45657155 gtctt 45657151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 82; E-Value: 4e-39
Query Start/End: Original strand, 15 - 128
Target Start/End: Original strand, 4048950 - 4049063
Alignment:
Q  15 atttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgtgtcttctt 114  Q
    ||||||||||||||||||||| |||| |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| |     
T  4048950 atttaggatcttatgtaataaacttaaaaagcttgaaaattattgtaatgtattgttcatacattaataaaatgagttgttttcatgtttgtgtcttttc 4049049  T
Q  115 atttctgtttttta 128  Q
    |||| |||||||||    
T  4049050 atttatgtttttta 4049063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 82; E-Value: 4e-39
Query Start/End: Original strand, 7 - 128
Target Start/End: Complemental strand, 52917239 - 52917119
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| |||||||||||||||| |||||||||| |||| |||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  52917239 agaaatagatttaggatcttatgcaataagctta-aaagcttgaaagttattgtaatgtattgttcatatattaataaaatcagttgtttttatgtttgt 52917141  T
Q  107 gtcttcttatttctgtttttta 128  Q
    ||| | |||||||| |||||||    
T  52917140 gtccttttatttctatttttta 52917119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 81; E-Value: 1e-38
Query Start/End: Original strand, 7 - 127
Target Start/End: Original strand, 16452756 - 16452867
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16452756 agaaatagatttaggatcttatgtaataagctt---------gaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 16452846  T
Q  107 gtcttcttatttctgtttttt 127  Q
    ||||| |||||||||||||||    
T  16452847 gtctttttatttctgtttttt 16452867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 81; E-Value: 1e-38
Query Start/End: Original strand, 28 - 128
Target Start/End: Complemental strand, 28310195 - 28310095
Alignment:
Q  28 tgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgtgtcttcttatttctgtttttt 127  Q
    ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||||    
T  28310195 tgtaataagcttaaaaagcttgaaaattattgtaatgtattgttcatatattaataaaatgagttatttttatgtttgtgtctttttatttatgtttttt 28310096  T
Q  128 a 128  Q
    |    
T  28310095 a 28310095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 80; E-Value: 6e-38
Query Start/End: Original strand, 7 - 128
Target Start/End: Original strand, 53271657 - 53271780
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaata-aaatgagttgtttttatg-ttt 104  Q
    |||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| || || ||| |||||||||||||||||| |||    
T  53271657 agaaatagatttaggatcttatgtaataagcttaaaaagcttgaaaattattgtaatgtattgttcacatttttatataaatgagttgtttttatgtttt 53271756  T
Q  105 gtgtcttcttatttctgtttttta 128  Q
    ||||||| ||||||||||||||||    
T  53271757 gtgtctttttatttctgtttttta 53271780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 78; E-Value: 9e-37
Query Start/End: Original strand, 7 - 128
Target Start/End: Complemental strand, 2013060 - 2012948
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| |||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2013060 agaaatagatttaggatcttatgtaataagctta---------aaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 2012970  T
Q  107 gtcttcttatttctgtttttta 128  Q
    ||||| |||||||||| |||||    
T  2012969 gtctttttatttctgtctttta 2012948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 77; E-Value: 4e-36
Query Start/End: Original strand, 7 - 127
Target Start/End: Complemental strand, 56463000 - 56462880
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||||||||| | | ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  56463000 agaaatagatttaggatcttgtatcataagcttaaaaagcttgaaaattattgtaatgtattgttcatatattaataaaattagttgtttttctgtttgt 56462901  T
Q  107 gtcttcttatttctgtttttt 127  Q
    || || ||||||||| |||||    
T  56462900 gtttttttatttctgattttt 56462880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 76; E-Value: 1e-35
Query Start/End: Original strand, 9 - 100
Target Start/End: Original strand, 30004365 - 30004456
Alignment:
Q  9 aaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttat 100  Q
    |||| ||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  30004365 aaatagatttaggatcttatgtaataagcttaaaaagcttgaaaattattgtaatgtattgttcatatattaataaaatgagttctttttat 30004456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 74; E-Value: 2e-34
Query Start/End: Original strand, 47 - 128
Target Start/End: Complemental strand, 18559691 - 18559610
Alignment:
Q  47 ttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgtgtcttcttatttctgtttttta 128  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  18559691 ttgaaaattattgtaatgtattgttcatatattaataaaatgagttttttttatgtttgtgtctttttatttctgtttttta 18559610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 74; E-Value: 2e-34
Query Start/End: Original strand, 7 - 128
Target Start/End: Original strand, 33281870 - 33281982
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33281870 agaaatagatttaggatcttatgtaataagctt---------gaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 33281960  T
Q  107 gtcttcttatttctgtttttta 128  Q
    ||||| |||||  |||||||||    
T  33281961 gtctttttattcatgtttttta 33281982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 74; E-Value: 2e-34
Query Start/End: Original strand, 47 - 128
Target Start/End: Original strand, 55137484 - 55137565
Alignment:
Q  47 ttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgtgtcttcttatttctgtttttta 128  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  55137484 ttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgtgtctttttattgctgtttttta 55137565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 66; E-Value: 1e-29
Query Start/End: Original strand, 47 - 128
Target Start/End: Original strand, 45925428 - 45925509
Alignment:
Q  47 ttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgtgtcttcttatttctgtttttta 128  Q
    |||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| ||||||||||||||||    
T  45925428 ttgaaagttattgtaatgtattgttcatatattaataaaatgtgttatttttatgtttgtgtctttttatttctgtttttta 45925509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 63; E-Value: 8e-28
Query Start/End: Original strand, 7 - 128
Target Start/End: Original strand, 44109385 - 44109496
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||||||||||||||||||||||| |||  ||||||||||||          ||||||||||||||||||||||||||||||||||||||    
T  44109385 agaaatagatttaggatcttatgtaataagcttaaaaaacttgaaaattatt----------gttcatatattaataaaatgagttgtttttatgtttgt 44109474  T
Q  107 gtcttcttatttctgtttttta 128  Q
    ||||| |||||||| |||||||    
T  44109475 gtctttttatttctatttttta 44109496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 59; E-Value: 2e-25
Query Start/End: Original strand, 7 - 85
Target Start/End: Original strand, 45462994 - 45463072
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaa 85  Q
    |||||| ||||||||||||||||||||||| ||| |||| |||||||| ||||||||||||||||||||||||||||||    
T  45462994 agaaatagatttaggatcttatgtaataagtttaaaaagcttgaaaatgattgtaatgtattgttcatatattaataaa 45463072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 42 - 106
Target Start/End: Complemental strand, 40760390 - 40760326
Alignment:
Q  42 aaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||| |||||||||||| |||||    
T  40760390 aaagcttgaaaattattgtagtgtattgttcatatattaataaaatcagttgtttttatatttgt 40760326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 77 - 128
Target Start/End: Original strand, 45463500 - 45463551
Alignment:
Q  77 attaataaaatgagttgtttttatgtttgtgtcttcttatttctgtttttta 128  Q
    ||||||||||||||||||||||||||||||||||| |||||||| |||||||    
T  45463500 attaataaaatgagttgtttttatgtttgtgtctttttatttctatttttta 45463551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 57 - 125
Target Start/End: Original strand, 17647572 - 17647641
Alignment:
Q  57 ttgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgtg-tcttcttatttctgtttt 125  Q
    |||||||||||| |||||| ||||||||||||| ||  |||||| |||||| |||| |||||||||||||    
T  17647572 ttgtaatgtattattcatacattaataaaatgacttcattttatctttgtgttctttttatttctgtttt 17647641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 102; Significance: 4e-51; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 102; E-Value: 4e-51
Query Start/End: Original strand, 7 - 128
Target Start/End: Original strand, 47647723 - 47647844
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  47647723 agaaatagatttaggatcttatgtaataagcttaaaaagcttgaaaattattgtaatgtattgttcatatattaataaaatgggttgtttttatgtttgt 47647822  T
Q  107 gtcttcttatttctgtttttta 128  Q
    ||||| ||||||||||||||||    
T  47647823 gtctttttatttctgtttttta 47647844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 102; E-Value: 4e-51
Query Start/End: Original strand, 7 - 128
Target Start/End: Complemental strand, 49325046 - 49324925
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||| ||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49325046 agaaatagatttagcatcttatgtaataagcttaaaaagcttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 49324947  T
Q  107 gtcttcttatttctgtttttta 128  Q
    ||||| ||||||||||||||||    
T  49324946 gtctttttatttctgtttttta 49324925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 98; E-Value: 1e-48
Query Start/End: Original strand, 7 - 128
Target Start/End: Original strand, 39353914 - 39354035
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  39353914 agaaatagatttaggatcttatgtaataagcttaaaaagcttgaaaattattgtaatgtattattcatatattaataaaatgagttgtttttatgtttgt 39354013  T
Q  107 gtcttcttatttctgtttttta 128  Q
    ||||| |||||||||| |||||    
T  39354014 gtctttttatttctgtctttta 39354035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 98; E-Value: 1e-48
Query Start/End: Original strand, 7 - 128
Target Start/End: Complemental strand, 47013093 - 47012972
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  47013093 agaaatagatttaggatcttatgtaataagcttaaaaagcttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgc 47012994  T
Q  107 gtcttcttatttctgtttttta 128  Q
    ||||| |||||||| |||||||    
T  47012993 gtctttttatttctatttttta 47012972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 94; E-Value: 3e-46
Query Start/End: Original strand, 7 - 128
Target Start/End: Complemental strand, 36402153 - 36402032
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| |||||| |||||||| ||||||||||| |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  36402153 agaaatagatttaagatcttatttaataagcttaaaaagcttgaaaattattgtaatgcattgttcatatattaataaaatgagttgtttttatgtttgt 36402054  T
Q  107 gtcttcttatttctgtttttta 128  Q
    ||||| ||||||||||||||||    
T  36402053 gtctttttatttctgtttttta 36402032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 94; E-Value: 3e-46
Query Start/End: Original strand, 7 - 128
Target Start/End: Complemental strand, 47372504 - 47372383
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||| |||| |||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47372504 agaaatagatttagcatctcatgtaataagcttaaaaagcttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 47372405  T
Q  107 gtcttcttatttctgtttttta 128  Q
    ||||| |||||| |||||||||    
T  47372404 gtctttttatttatgtttttta 47372383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 94; E-Value: 3e-46
Query Start/End: Original strand, 7 - 128
Target Start/End: Original strand, 48065727 - 48065848
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||| ||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48065727 agaaatagatttagcatcttatgtaataagcttaaaaagcttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 48065826  T
Q  107 gtcttcttatttctgtttttta 128  Q
    ||||| |||| |||| ||||||    
T  48065827 gtctttttatctctgcttttta 48065848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 92; E-Value: 4e-45
Query Start/End: Original strand, 9 - 128
Target Start/End: Complemental strand, 44205184 - 44205065
Alignment:
Q  9 aaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgtgt 108  Q
    |||| ||||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  44205184 aaatagatttaggatcttatgtaataagtttaaaaagcttgaaaattattgtaatgtattgttcatatattaataaaatcagttgtttttatgtttgtgt 44205085  T
Q  109 cttcttatttctgtttttta 128  Q
    | | ||||||||||||||||    
T  44205084 ccttttatttctgtttttta 44205065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 92; E-Value: 4e-45
Query Start/End: Original strand, 9 - 128
Target Start/End: Original strand, 53816743 - 53816862
Alignment:
Q  9 aaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgtgt 108  Q
    |||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| |||    
T  53816743 aaatagatttaggatcttatgtaataagcttaaaaagcttgaaaattattgtaatgtattgttcatatattaataaaacaagttgtttttatgtttatgt 53816842  T
Q  109 cttcttatttctgtttttta 128  Q
    ||| ||||||||||||||||    
T  53816843 ctttttatttctgtttttta 53816862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 91; E-Value: 2e-44
Query Start/End: Original strand, 7 - 128
Target Start/End: Original strand, 16479012 - 16479134
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||| ||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16479012 agaaatagatttagcatcttatgtaataagcttaaaaagcttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 16479111  T
Q  107 gtcttcttatttc-tgtttttta 128  Q
    | ||| ||||||| |||||||||    
T  16479112 ggctttttatttcttgtttttta 16479134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 91; E-Value: 2e-44
Query Start/End: Original strand, 9 - 127
Target Start/End: Original strand, 30390511 - 30390629
Alignment:
Q  9 aaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgtgt 108  Q
    |||| ||||||||||||||||||||||||||| |||  ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  30390511 aaatagatttaggatcttatgtaataagcttaaaaaacttgaaaattattgtaatgtattgttcatatattaataaaatcagttgtttttatgtttgtgt 30390610  T
Q  109 cttcttatttctgtttttt 127  Q
    ||| |||||| ||||||||    
T  30390611 ctttttatttatgtttttt 30390629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 90; E-Value: 6e-44
Query Start/End: Original strand, 7 - 128
Target Start/End: Original strand, 228184 - 228305
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  228184 agaaatagatttaggatcttatgtaataagtttaaaaagcttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 228283  T
Q  107 gtcttcttatttctgtttttta 128  Q
    ||||  |||||| |||| ||||    
T  228284 gtctatttatttatgttattta 228305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 90; E-Value: 6e-44
Query Start/End: Original strand, 7 - 128
Target Start/End: Complemental strand, 8484167 - 8484047
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||||||||||||||||||||||| |||| |||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  8484167 agaaatagatttaggatcttatgtaataagcttaaaaagcttgaaa-ttattgtaatgtattgttcatatattaagaaaatgagttgtttttatgtttgt 8484069  T
Q  107 gtcttcttatttctgtttttta 128  Q
    ||||| |||||||||| |||||    
T  8484068 gtctttttatttctgtctttta 8484047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 90; E-Value: 6e-44
Query Start/End: Original strand, 7 - 128
Target Start/End: Complemental strand, 21448383 - 21448262
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||||||||||||||||||||||| |||  ||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||    
T  21448383 agaaatagatttaggatcttatgtaataagcttaaaaaacttgaaaattattgtaatatattgttcatatattaataaaatgaggtgtttttatgtttgt 21448284  T
Q  107 gtcttcttatttctgtttttta 128  Q
    ||||| |||||||| |||||||    
T  21448283 gtctttttatttctatttttta 21448262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 90; E-Value: 6e-44
Query Start/End: Original strand, 7 - 128
Target Start/End: Complemental strand, 49165434 - 49165314
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||    
T  49165434 agaaatagatttaggatcttatgtaataagcttaaaaagcttgaaaattattgtaatgtattgttcatgtattagtaaaatgagttgttttt-tgtttgt 49165336  T
Q  107 gtcttcttatttctgtttttta 128  Q
    ||||| ||||||||||||||||    
T  49165335 gtctttttatttctgtttttta 49165314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 87; E-Value: 4e-42
Query Start/End: Original strand, 7 - 128
Target Start/End: Original strand, 6937232 - 6937351
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| |||||||||||||||||||  |||||| |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  6937232 agaaatagatttaggatcttatgtaa--agcttaaaaagcttgaaaattattgtaatttattgttcatatattaataaaatgagttgttttaatgtttgt 6937329  T
Q  107 gtcttcttatttctgtttttta 128  Q
    ||||| ||||||||||||||||    
T  6937330 gtctttttatttctgtttttta 6937351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 87; E-Value: 4e-42
Query Start/End: Original strand, 14 - 128
Target Start/End: Original strand, 32530598 - 32530712
Alignment:
Q  14 gatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgtgtcttct 113  Q
    |||||| ||||||||  |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  32530598 gatttaagatcttataaaataagcttaaaaagcttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgtgtctttt 32530697  T
Q  114 tatttctgtttttta 128  Q
    ||||||||| |||||    
T  32530698 tatttctgtctttta 32530712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 86; E-Value: 2e-41
Query Start/End: Original strand, 7 - 128
Target Start/End: Complemental strand, 41193091 - 41192970
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| |||||||||||||| ||||||||||||  ||| |||||||||||||||||||||||||||||| ||||||||||||||||| | |||||||||    
T  41193091 agaaatagatttaggatcttacgtaataagcttaagaagcttgaaaattattgtaatgtattgttcatatgttaataaaatgagttgtctctatgtttgt 41192992  T
Q  107 gtcttcttatttctgtttttta 128  Q
    ||||| ||||||||||||||||    
T  41192991 gtctttttatttctgtttttta 41192970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 82; E-Value: 4e-39
Query Start/End: Original strand, 7 - 128
Target Start/End: Complemental strand, 3939203 - 3939082
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||| ||||||||||||| ||||| |||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3939203 agaaatagatttagcatcttatgtaataggcttaaaaagcttaaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 3939104  T
Q  107 gtcttcttatttctgtttttta 128  Q
    |  ||  |||||||||||||||    
T  3939103 gcttttctatttctgtttttta 3939082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 82; E-Value: 4e-39
Query Start/End: Original strand, 7 - 116
Target Start/End: Complemental strand, 26501529 - 26501421
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||||||||||| ||||||||||| |||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  26501529 agaaatagatttaggatcttatataataagcttaaaaagtt-gaaaattattgtaatgtattattcatatattaataaaatgagttgtttttatgtttgt 26501431  T
Q  107 gtcttcttat 116  Q
    ||||| ||||    
T  26501430 gtctttttat 26501421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 67; E-Value: 3e-30
Query Start/End: Original strand, 15 - 121
Target Start/End: Complemental strand, 31764519 - 31764413
Alignment:
Q  15 atttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgtgtcttctt 114  Q
    ||||||| |||||| ||||||||||| |||| || || |||||||||||||||||||||||||| ||||||||||||||||||||| ||| |||||| ||    
T  31764519 atttaggttcttatataataagcttaaaaagcttcaacattattgtaatgtattgttcatatatcaataaaatgagttgtttttatctttctgtcttttt 31764420  T
Q  115 atttctg 121  Q
    |||||||    
T  31764419 atttctg 31764413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 59; E-Value: 2e-25
Query Start/End: Original strand, 7 - 125
Target Start/End: Complemental strand, 22155013 - 22154895
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| | |||||| |||||||||| || || | ||||||| || |||||||||||||||| |||| |||| ||||||||||||||||||||| ||| |    
T  22155013 agaaatagttttaggttcttatgtaaaaaactgaaaaagtttcaacattattgtaatgtattattcaaatatcaataaaatgagttgtttttatcttttt 22154914  T
Q  107 gtcttcttatttctgtttt 125  Q
    ||||| |||||||||||||    
T  22154913 gtctttttatttctgtttt 22154895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 53; E-Value: 8e-22
Query Start/End: Original strand, 53 - 125
Target Start/End: Complemental strand, 26981239 - 26981167
Alignment:
Q  53 attattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgtgtcttcttatttctgtttt 125  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||||| ||| |||||| |||||||||||||    
T  26981239 attattgtaatgtattattcatatatcaataaaatgagttgtttttatctttttgtctttttatttctgtttt 26981167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 53; E-Value: 8e-22
Query Start/End: Original strand, 15 - 83
Target Start/End: Complemental strand, 41972489 - 41972421
Alignment:
Q  15 atttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaata 83  Q
    ||||||||| |||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||    
T  41972489 atttaggattttatgtaataagcttaaaaaatttgaaaattattgtaacgtattgttcatatattaata 41972421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 9128444 - 9128499
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaa 62  Q
    |||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  9128444 agaaatagatttaggatcttatgtaataagcttaaaaagcttgaaaattattgtaa 9128499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 9136551 - 9136606
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaa 62  Q
    |||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  9136551 agaaatagatttaggatcttatgtaataagcttaaaaagcttgaaaattattgtaa 9136606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.0000000000007
Query Start/End: Original strand, 7 - 56
Target Start/End: Original strand, 39587377 - 39587426
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaatta 56  Q
    |||||| ||||||||||||||||||||||||||| |||| ||||||||||    
T  39587377 agaaatagatttaggatcttatgtaataagcttaaaaagcttgaaaatta 39587426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 77 - 125
Target Start/End: Original strand, 9128501 - 9128549
Alignment:
Q  77 attaataaaatgagttgtttttatgtttgtgtcttcttatttctgtttt 125  Q
    ||||||||||||||||||| |||| ||| |||||| |||||||||||||    
T  9128501 attaataaaatgagttgttattatctttttgtctttttatttctgtttt 9128549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 77 - 125
Target Start/End: Original strand, 9136608 - 9136656
Alignment:
Q  77 attaataaaatgagttgtttttatgtttgtgtcttcttatttctgtttt 125  Q
    ||||||||||||||||||| |||| ||| |||||| |||||||||||||    
T  9136608 attaataaaatgagttgttattatctttttgtctttttatttctgtttt 9136656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 23 - 89
Target Start/End: Original strand, 9332779 - 9332844
Alignment:
Q  23 tcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatga 89  Q
    |||||||||||||||||| |||  || || ||||||||||| |||| |||||||||| |||||||||    
T  9332779 tcttatgtaataagcttaaaaaacttcaacattattgtaat-tattattcatatattgataaaatga 9332844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 21972300 - 21972218
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatga 89  Q
    |||||| | |||||| |||||||||| || || | |||| || || |||||||||||||||| |||| |||| ||||||||||    
T  21972300 agaaatagttttaggttcttatgtaaaaaactgaaaaagcttcaacattattgtaatgtattattcaaatatcaataaaatga 21972218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 21994731 - 21994649
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatga 89  Q
    |||||| | |||||| |||||||||| || || | |||| || || |||||||||||||||| |||| |||| ||||||||||    
T  21994731 agaaatagttttaggttcttatgtaaaaaactgaaaaagcttcaacattattgtaatgtattattcaaatatcaataaaatga 21994649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 102; Significance: 4e-51; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 102; E-Value: 4e-51
Query Start/End: Original strand, 7 - 128
Target Start/End: Original strand, 29962203 - 29962324
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| | ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29962203 agaaataggtttaggatcttatgtaataagcttaaaaagcttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 29962302  T
Q  107 gtcttcttatttctgtttttta 128  Q
    ||||| ||||||||||||||||    
T  29962303 gtctttttatttctgtttttta 29962324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 100; E-Value: 7e-50
Query Start/End: Original strand, 7 - 126
Target Start/End: Complemental strand, 7197775 - 7197656
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7197775 agaaatagatttagcatcttatgtaataagcttaaaaagtttaaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 7197676  T
Q  107 gtcttcttatttctgttttt 126  Q
    ||||| ||||||||||||||    
T  7197675 gtctttttatttctgttttt 7197656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 98; E-Value: 1e-48
Query Start/End: Original strand, 7 - 128
Target Start/End: Complemental strand, 12699883 - 12699762
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  12699883 agaaatagatttaggatcttatgtaataagcttaaaaagcttgaaaattattgtaatttatagttcatatattaataaaatgagttgtttttatgtttgt 12699784  T
Q  107 gtcttcttatttctgtttttta 128  Q
    ||||| ||||||||||||||||    
T  12699783 gtctttttatttctgtttttta 12699762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 98; E-Value: 1e-48
Query Start/End: Original strand, 7 - 128
Target Start/End: Original strand, 22859477 - 22859597
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  22859477 agaaatagatttaggatcttatgtaataagcttaaaaagcttgaaaattattgtaatgtattgttcatatattaataaaatgaattgtttttatgtttgt 22859576  T
Q  107 gtcttcttatttctgtttttta 128  Q
    ||||| ||||||||||||||||    
T  22859577 gtctt-ttatttctgtttttta 22859597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 98; E-Value: 1e-48
Query Start/End: Original strand, 7 - 128
Target Start/End: Original strand, 33802137 - 33802258
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  33802137 agaaatagatttaggatcttatgtaataagcttaaaaagcttgaaaattatagtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 33802236  T
Q  107 gtcttcttatttctgtttttta 128  Q
    ||||| |||||| |||||||||    
T  33802237 gtctttttatttttgtttttta 33802258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 98; E-Value: 1e-48
Query Start/End: Original strand, 7 - 128
Target Start/End: Original strand, 39600529 - 39600650
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39600529 agaaatagatttaggatcttatgtaataagcttaaaaagcttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 39600628  T
Q  107 gtcttcttatttctgtttttta 128  Q
    ||| | |||||| |||||||||    
T  39600629 gtccttttatttttgtttttta 39600650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 98; E-Value: 1e-48
Query Start/End: Original strand, 7 - 128
Target Start/End: Complemental strand, 48963665 - 48963544
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  48963665 agaaatagatttaggatcttatgtaataagcttaaaaagcttgaaaattattgtaatgtgttgttcatatattaataaaatgagttgtttttatatttgt 48963566  T
Q  107 gtcttcttatttctgtttttta 128  Q
    ||||| ||||||||||||||||    
T  48963565 gtctttttatttctgtttttta 48963544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 96; E-Value: 2e-47
Query Start/End: Original strand, 7 - 126
Target Start/End: Original strand, 41087223 - 41087342
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||| ||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  41087223 agaaatagatttagaatcttatgtaataagcttaaaaagcttgaaaattattgtaatgtattgttcatatattaataaaatgagttatttttatgtttgt 41087322  T
Q  107 gtcttcttatttctgttttt 126  Q
    ||||| ||||||||||||||    
T  41087323 gtctttttatttctgttttt 41087342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 96; E-Value: 2e-47
Query Start/End: Original strand, 7 - 126
Target Start/End: Original strand, 41091991 - 41092110
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||| ||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  41091991 agaaatagatttagaatcttatgtaataagcttaaaaagcttgaaaattattgtaatgtattgttcatatattaataaaatgagttatttttatgtttgt 41092090  T
Q  107 gtcttcttatttctgttttt 126  Q
    ||||| ||||||||||||||    
T  41092091 gtctttttatttctgttttt 41092110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 94; E-Value: 3e-46
Query Start/End: Original strand, 7 - 128
Target Start/End: Original strand, 38861498 - 38861618
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  38861498 agaaatagatttaggatcttatgtaataagcttaaaaagcttgaaaattattgtaatgtatttttcatatattaataaaatgagttg-ttttatgtttgt 38861596  T
Q  107 gtcttcttatttctgtttttta 128  Q
    ||||| ||||||||||||||||    
T  38861597 gtctttttatttctgtttttta 38861618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 93; E-Value: 1e-45
Query Start/End: Original strand, 7 - 127
Target Start/End: Complemental strand, 22333605 - 22333485
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||| ||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22333605 agaaatagatttagcatcttatgtaataagcttaaaaagcttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 22333506  T
Q  107 gtcttcttatttctgtttttt 127  Q
    ||| | |||||| ||||||||    
T  22333505 gtcattttatttatgtttttt 22333485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 93; E-Value: 1e-45
Query Start/End: Original strand, 7 - 127
Target Start/End: Original strand, 41724285 - 41724405
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||||||||||||||||||| ||| |||  |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  41724285 agaaatagatttaggatcttatgtaataagtttaaaaatcttgaaaattattgtaatgtactgttcatatattaataaaatgagttgtttttatgtttgt 41724384  T
Q  107 gtcttcttatttctgtttttt 127  Q
    ||||| |||||||||||||||    
T  41724385 gtctttttatttctgtttttt 41724405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 93; E-Value: 1e-45
Query Start/End: Original strand, 7 - 127
Target Start/End: Complemental strand, 50261327 - 50261207
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| |||||| |||||||||||||||||||| |||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50261327 agaaatagatttatgatcttatgtaataagcttaaaaaacttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 50261228  T
Q  107 gtcttcttatttctgtttttt 127  Q
    || || |||||||||||||||    
T  50261227 gtttttttatttctgtttttt 50261207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 89; E-Value: 2e-43
Query Start/End: Original strand, 7 - 127
Target Start/End: Original strand, 12529181 - 12529301
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| |||||| |||||||| ||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  12529181 agaaatagatttaagatcttatataataagcttacaaagcttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttat 12529280  T
Q  107 gtcttcttatttctgtttttt 127  Q
    ||||| ||| |||||||||||    
T  12529281 gtctttttacttctgtttttt 12529301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 87; E-Value: 4e-42
Query Start/End: Original strand, 7 - 128
Target Start/End: Complemental strand, 29946092 - 29945970
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaat-aaaatgagttgtttttatgtttg 105  Q
    |||||| ||||||| ||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  29946092 agaaatagatttagcatcttatgtaataagtttataaagcttgaaaattattgtaatgtattgttcatatattaataaaaatgagttgtttttatgtttg 29945993  T
Q  106 tgtcttcttatttctgtttttta 128  Q
    | |||| ||||||||||||||||    
T  29945992 tatctttttatttctgtttttta 29945970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 86; E-Value: 2e-41
Query Start/End: Original strand, 7 - 127
Target Start/End: Complemental strand, 3516924 - 3516803
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatg-tttg 105  Q
    |||||| ||||||| ||||||||||||||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  3516924 agaaatagatttagaatcttatgtaataagcttaaaaagcttgaaaattattgtaatgtattgttgatatattaataaaatgagttgtttttatgttttg 3516825  T
Q  106 tgtcttcttatttctgtttttt 127  Q
    |||||| |||||| ||||||||    
T  3516824 tgtctttttatttatgtttttt 3516803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 86; E-Value: 2e-41
Query Start/End: Original strand, 7 - 128
Target Start/End: Complemental strand, 12523474 - 12523353
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||  ||||||||||||||||||| |||| |||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  12523474 agaaatagatttaacatcttatgtaataagcttaaaaagcttgaaaattattgtaatgtattatttatatattaataaaatgagttgtttttatgtttgt 12523375  T
Q  107 gtcttcttatttctgtttttta 128  Q
    ||||| |||||||||| |||||    
T  12523374 gtctttttatttctgtgtttta 12523353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 86; E-Value: 2e-41
Query Start/End: Original strand, 7 - 128
Target Start/End: Original strand, 49852533 - 49852654
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||||||||||||||||||||||| |  | ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||     
T  49852533 agaaatagatttaggatcttatgtaataagcttaaagtgcttgaaaattattgtaatgtattgttcatatattaatacaatgagttgtttttatgtttgc 49852632  T
Q  107 gtcttcttatttctgtttttta 128  Q
    ||||| ||||||| ||||||||    
T  49852633 gtctttttatttcagtttttta 49852654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 85; E-Value: 6e-41
Query Start/End: Original strand, 7 - 127
Target Start/End: Complemental strand, 10310302 - 10310182
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||| |||||||||||| |||||| |||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10310302 agaaatagatttagcatcttatgtaatgagcttaaaaatcatgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 10310203  T
Q  107 gtcttcttatttctgtttttt 127  Q
     |||| |||||||||||||||    
T  10310202 ttctttttatttctgtttttt 10310182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 82; E-Value: 4e-39
Query Start/End: Original strand, 7 - 120
Target Start/End: Complemental strand, 14586667 - 14586554
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| |||||||||||||||| |||||| ||| |||  |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  14586667 agaaatagatttaggatcttatgcaataagtttaaaaaacttgaaaattattgtaatgcattgttcatatattaataaaatgagttgtttttatgtttgt 14586568  T
Q  107 gtcttcttatttct 120  Q
    ||||| ||||||||    
T  14586567 gtctttttatttct 14586554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 71; E-Value: 1e-32
Query Start/End: Original strand, 7 - 97
Target Start/End: Complemental strand, 41899617 - 41899527
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttt 97  Q
    |||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  41899617 agaaatagatttaggatcttatgtaataagcttaaaaagcttgaaaattattgtaatgtattgttcatatattaataacctgagttgtttt 41899527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 70; E-Value: 5e-32
Query Start/End: Original strand, 47 - 128
Target Start/End: Complemental strand, 23983321 - 23983240
Alignment:
Q  47 ttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgtgtcttcttatttctgtttttta 128  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||||    
T  23983321 ttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgtgtctttttatttttgtctttta 23983240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 70; E-Value: 5e-32
Query Start/End: Original strand, 7 - 127
Target Start/End: Complemental strand, 42881941 - 42881829
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgt-ttttatgtttg 105  Q
    |||||| ||||||||||||||||||||||||||         ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||    
T  42881941 agaaatagatttaggatcttatgtaataagctt---------gaaaattattgcaatgtattgttcatatattaataaaatgagttgttttttatgtttg 42881851  T
Q  106 tgtcttcttatttctgtttttt 127  Q
    |||||| |||||||||||||||    
T  42881850 tgtctttttatttctgtttttt 42881829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 70; E-Value: 5e-32
Query Start/End: Original strand, 43 - 128
Target Start/End: Complemental strand, 52631648 - 52631563
Alignment:
Q  43 aagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgtgtcttcttatttctgtttttta 128  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| |||||| |||||||||    
T  52631648 aagtttgaaaattattgtaatgtattgttcatatattaataaaattagttatttttatgtttgtgtctttttatttatgtttttta 52631563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 58; E-Value: 8e-25
Query Start/End: Original strand, 9 - 98
Target Start/End: Original strand, 27217608 - 27217697
Alignment:
Q  9 aaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgttttt 98  Q
    |||| |||||||| |||||||||||||||||| |||| || ||  ||||||||||||||||||||||||||||||||||||||| |||||    
T  27217608 aaattgatttaggttcttatgtaataagcttaaaaagcttcaacgttattgtaatgtattgttcatatattaataaaatgagtttttttt 27217697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 58; E-Value: 8e-25
Query Start/End: Original strand, 7 - 84
Target Start/End: Complemental strand, 44754738 - 44754661
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataa 84  Q
    |||||| |||||| |||||||||||||||||||| |||| |||||||||||||||||||||| |||||||||||||||    
T  44754738 agaaatagatttatgatcttatgtaataagcttaaaaagcttgaaaattattgtaatgtattattcatatattaataa 44754661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 52; E-Value: 3e-21
Query Start/End: Original strand, 7 - 128
Target Start/End: Original strand, 30233563 - 30233673
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||||||||||||||||||| ||| |||  ||||||||||||||||||           ||||||||||||||||||||||||||||| |    
T  30233563 agaaatagatttaggatcttatgtaataagattaaaaaacttgaaaattattgtaatg-----------tattaataaaatgagttgtttttatgtttat 30233651  T
Q  107 gtcttcttatttctgtttttta 128  Q
    ||||| |||||| |||||||||    
T  30233652 gtctttttatttttgtttttta 30233673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 50; E-Value: 5e-20
Query Start/End: Original strand, 7 - 100
Target Start/End: Original strand, 43253462 - 43253555
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttat 100  Q
    |||||| | |||||| | ||||||||||| |||| |||| || || |||||||||||||||| ||||||||| |||||||||||||||||||||    
T  43253462 agaaatagttttaggtttttatgtaataaacttaaaaagcttcaacattattgtaatgtattattcatatatcaataaaatgagttgtttttat 43253555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 45; E-Value: 5e-17
Query Start/End: Original strand, 7 - 106
Target Start/End: Original strand, 44497290 - 44497383
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgag---ttgtttttatgtt 103  Q
    |||||| ||||||||||||||||||||||||||         ||||||||||| |||||||||| |||||||||||||||||||   |||||||||||||    
T  44497290 agaaatagatttaggatcttatgtaataagctt---------gaaaattattgaaatgtattgtacatatattaataaaatgagctcttgtttttatgtt 44497380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 65 - 128
Target Start/End: Original strand, 37953009 - 37953072
Alignment:
Q  65 tattgttcatatattaataaaatgagttgtttttatgtttgtgtcttcttatttctgtttttta 128  Q
    ||||||||||||||||||||||| |||||||||||||||| ||| || ||| ||||||||||||    
T  37953009 tattgttcatatattaataaaataagttgtttttatgtttttgtttttttacttctgtttttta 37953072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 82 - 127
Target Start/End: Complemental strand, 3470413 - 3470368
Alignment:
Q  82 taaaatgagttgtttttatgtttgtgtcttcttatttctgtttttt 127  Q
    |||||||||||||||||||||||||||||| |||||||||||||||    
T  3470413 taaaatgagttgtttttatgtttgtgtcttgttatttctgtttttt 3470368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.00000000000004
Query Start/End: Original strand, 76 - 127
Target Start/End: Complemental strand, 44753298 - 44753247
Alignment:
Q  76 tattaataaaatgagttgtttttatgtttgtgtcttcttatttctgtttttt 127  Q
    |||||||||||||| ||||||||||||||||||||| ||||||| |||||||    
T  44753298 tattaataaaatgaattgtttttatgtttgtgtctttttatttccgtttttt 44753247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 60 - 125
Target Start/End: Complemental strand, 30516210 - 30516144
Alignment:
Q  60 taatgtattgttcatatattaataaaatgagttgtttttatgtttgtg-tcttcttatttctgtttt 125  Q
    ||||||||| |||||||||||||||||||| || ||||||| |||||| |||| |||||||||||||    
T  30516210 taatgtattattcatatattaataaaatgacttctttttatctttgtgttctttttatttctgtttt 30516144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.0000000000007
Query Start/End: Original strand, 24 - 125
Target Start/End: Original strand, 21737241 - 21737342
Alignment:
Q  24 cttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgtgtcttcttatttctgtt 123  Q
    ||||| ||||||| ||| |||| || || |||||||||||||||| ||||||||| |||||||| | || |||| || ||| |||||| |||||| ||||    
T  21737241 cttatataataagattaaaaagcttcaacattattgtaatgtattattcatatatcaataaaataatttattttaatctttttgtctttttatttatgtt 21737340  T
Q  124 tt 125  Q
    ||    
T  21737341 tt 21737342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 53 - 125
Target Start/End: Complemental strand, 7562370 - 7562298
Alignment:
Q  53 attattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgtgtcttcttatttctgtttt 125  Q
    |||||| ||||||||| |||| |||| ||||||||| ||||||||||| ||| |||||| ||||||| |||||    
T  7562370 attattttaatgtattattcaaatatcaataaaatgtgttgtttttatctttttgtctttttatttcagtttt 7562298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 57 - 125
Target Start/End: Complemental strand, 6603406 - 6603337
Alignment:
Q  57 ttgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgtg-tcttcttatttctgtttt 125  Q
    |||||||||||| |||||||||||||||||||| ||  || ||| |||||| |||| |||||| ||||||    
T  6603406 ttgtaatgtattattcatatattaataaaatgatttccttctatctttgtgttctttttatttatgtttt 6603337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 101; Significance: 2e-50; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 101; E-Value: 2e-50
Query Start/End: Original strand, 7 - 127
Target Start/End: Complemental strand, 31722234 - 31722114
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31722234 agaaatagatttaggatcttatgtaataagcttaaaaagcttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 31722135  T
Q  107 gtcttcttatttctgtttttt 127  Q
    ||||| |||||| ||||||||    
T  31722134 gtctttttatttatgtttttt 31722114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 100; E-Value: 7e-50
Query Start/End: Original strand, 9 - 128
Target Start/End: Original strand, 304565 - 304684
Alignment:
Q  9 aaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgtgt 108  Q
    |||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  304565 aaatagatttaggatcttatgtaataagcttaaaaagcttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgtgt 304664  T
Q  109 cttcttatttctgtttttta 128  Q
    ||| |||||| |||||||||    
T  304665 ctttttatttatgtttttta 304684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 97; E-Value: 4e-48
Query Start/End: Original strand, 7 - 127
Target Start/End: Original strand, 11975778 - 11975898
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||    
T  11975778 agaaatagatttaggatcttatgtaataagcttaaaaagcttgaaaattattgtaatgtattgttcatatattaataaaatgaattgtttttatgttggt 11975877  T
Q  107 gtcttcttatttctgtttttt 127  Q
    ||||| |||||||||||||||    
T  11975878 gtctttttatttctgtttttt 11975898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 97; E-Value: 4e-48
Query Start/End: Original strand, 7 - 127
Target Start/End: Complemental strand, 34540762 - 34540642
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  34540762 agaaatagatttaggatcttatgtaataagcttaaaaagcttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttat 34540663  T
Q  107 gtcttcttatttctgtttttt 127  Q
    ||||| ||||||| |||||||    
T  34540662 gtctttttatttccgtttttt 34540642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 95; E-Value: 7e-47
Query Start/End: Original strand, 14 - 128
Target Start/End: Original strand, 34951225 - 34951339
Alignment:
Q  14 gatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgtgtcttct 113  Q
    ||||||| ||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |    
T  34951225 gatttagcatcttatgtaataagcttaaaaagcttgaaaattattgtaatgtattgttcatatattaataaaataagttgtttttatgtttgtgtctttt 34951324  T
Q  114 tatttctgtttttta 128  Q
    |||||||||||||||    
T  34951325 tatttctgtttttta 34951339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 90; E-Value: 6e-44
Query Start/End: Original strand, 7 - 128
Target Start/End: Original strand, 439859 - 439980
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||||||||||||||||| ||||| |||| || |||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  439859 agaaatagatttaggatcttatgtaataggcttaaaaagcttaaaaattattgcaatgtattgttcatatattaataaaatgacttgtttttatgtttgt 439958  T
Q  107 gtcttcttatttctgtttttta 128  Q
    ||||| ||||||||||||||||    
T  439959 gtctttttatttctgtttttta 439980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 90; E-Value: 6e-44
Query Start/End: Original strand, 7 - 128
Target Start/End: Original strand, 16396149 - 16396270
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||||||||||||||||||||||| |||  |||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||    
T  16396149 agaaatagatttaggatcttatgtaataagcttaaaaaacttgaaaattattgtaatgtattgttcatatgttaattaaatgagttctttttatgtttgt 16396248  T
Q  107 gtcttcttatttctgtttttta 128  Q
    ||||| ||||||||||||||||    
T  16396249 gtctttttatttctgtttttta 16396270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 90; E-Value: 6e-44
Query Start/End: Original strand, 7 - 128
Target Start/End: Original strand, 31272062 - 31272183
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||||||||||| |||||| |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31272062 agaaatagatttaggatcttatataataaacttaaaaagcttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 31272161  T
Q  107 gtcttcttatttctgtttttta 128  Q
    ||||| ||| |||||| |||||    
T  31272162 gtctttttaattctgtctttta 31272183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 88; E-Value: 1e-42
Query Start/End: Original strand, 7 - 118
Target Start/End: Original strand, 18574737 - 18574848
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||||||||||||||||||||||| |||  ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  18574737 agaaatagatttaggatcttatgtaataagcttaaaaaacttgaaaattattgtaatgtattgttcatatattaataaaataagttgtttttatgtttgt 18574836  T
Q  107 gtcttcttattt 118  Q
    ||||| ||||||    
T  18574837 gtctttttattt 18574848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 88; E-Value: 1e-42
Query Start/End: Original strand, 7 - 118
Target Start/End: Original strand, 18584618 - 18584729
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||||||||||||||||||||||| |||  ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  18584618 agaaatagatttaggatcttatgtaataagcttaaaaaacttgaaaattattgtaatgtattgttcatatattaataaaataagttgtttttatgtttgt 18584717  T
Q  107 gtcttcttattt 118  Q
    ||||| ||||||    
T  18584718 gtctttttattt 18584729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 86; E-Value: 2e-41
Query Start/End: Original strand, 9 - 126
Target Start/End: Original strand, 29437315 - 29437432
Alignment:
Q  9 aaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgtgt 108  Q
    |||| ||||||  ||||||||||||||||||| |||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29437315 aaatagatttaacatcttatgtaataagcttaaaaagcttgaaagttattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgtgt 29437414  T
Q  109 cttcttatttctgttttt 126  Q
    ||| ||||||| ||||||    
T  29437415 ctttttatttcggttttt 29437432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 85; E-Value: 6e-41
Query Start/End: Original strand, 7 - 127
Target Start/End: Complemental strand, 9304331 - 9304211
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||||||| ||||||||||||||| |||  ||||||||||||||||||||||||||| ||||||||||||||||||| |||| |||||||    
T  9304331 agaaatagatttaggatcatatgtaataagcttaaaaaacttgaaaattattgtaatgtattgttcaaatattaataaaatgagttgcttttttgtttgt 9304232  T
Q  107 gtcttcttatttctgtttttt 127  Q
    ||||| |||||||||||||||    
T  9304231 gtctttttatttctgtttttt 9304211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 79; E-Value: 2e-37
Query Start/End: Original strand, 9 - 127
Target Start/End: Original strand, 481508 - 481626
Alignment:
Q  9 aaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgtgt 108  Q
    |||| ||||||||||||| ||||||||| ||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |    
T  481508 aaatagatttaggatcttgtgtaataagattaaaaagcttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgcat 481607  T
Q  109 cttcttatttctgtttttt 127  Q
    ||| ||||||  |||||||    
T  481608 ctttttattttcgtttttt 481626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 72; E-Value: 3e-33
Query Start/End: Original strand, 15 - 128
Target Start/End: Original strand, 31319334 - 31319444
Alignment:
Q  15 atttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgtgtcttctt 114  Q
    ||||||||||||||||||||| |||| |||| ||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||| ||    
T  31319334 atttaggatcttatgtaataaccttaaaaagcttgaaaattattgtaatgtatt---catatattaataaaatgagttgtttttatgtttgtgtcttttt 31319430  T
Q  115 atttctgtttttta 128  Q
    | || ||| |||||    
T  31319431 acttatgtctttta 31319444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 90; Significance: 6e-44; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 90; E-Value: 6e-44
Query Start/End: Original strand, 15 - 128
Target Start/End: Original strand, 17799 - 17912
Alignment:
Q  15 atttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgtgtcttctt 114  Q
    |||||||||||||||||||||||||| |||  ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| ||    
T  17799 atttaggatcttatgtaataagcttaaaaaacttgaaaattattgtaatgtattgttcatatattaataaaatcagttgtttttatgtttgtctcttttt 17898  T
Q  115 atttctgtttttta 128  Q
    ||||||||||||||    
T  17899 atttctgtttttta 17912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0209 (Bit Score: 71; Significance: 1e-32; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 71; E-Value: 1e-32
Query Start/End: Original strand, 7 - 128
Target Start/End: Complemental strand, 14487 - 14374
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| ||||||||||||||||||||||||||         ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  14487 agaaatagatttaggatcttatgtaataagctt---------gaaaattattgtaatttattgttcatatattaataaaatgagttgtttttatgtttgt 14397  T
Q  107 gtc-ttcttatttctgtttttta 128  Q
    ||| || ||||||||||||||||    
T  14396 gtcttttttatttctgtttttta 14374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 65; Significance: 5e-29; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 65; E-Value: 5e-29
Query Start/End: Original strand, 7 - 111
Target Start/End: Complemental strand, 46761 - 46657
Alignment:
Q  7 agaaatggatttaggatcttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgt 106  Q
    |||||| || ||||| |||||||||||||||||| |||| || || |||||||||||||||||||||||||||||||||||| ||||||||||| ||| |    
T  46761 agaaatagaattaggttcttatgtaataagcttaaaaagcttcaacattattgtaatgtattgttcatatattaataaaatgtgttgtttttatcttttt 46662  T
Q  107 gtctt 111  Q
    |||||    
T  46661 gtctt 46657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 45; Significance: 5e-17; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 45; E-Value: 5e-17
Query Start/End: Original strand, 25 - 128
Target Start/End: Complemental strand, 61123 - 61020
Alignment:
Q  25 ttatgtaataagcttagaaagtttgaaaattattgtaatgtattgttcatatattaataaaatgagttgtttttatgtttgtg-tcttcttatttctgtt 123  Q
    |||||||||||||||| |||| || || ||||||||||| |||| |||||||||||||||||||| || ||||||| |||||| |||| ||| || ||||    
T  61123 ttatgtaataagcttaaaaagcttcaacattattgtaat-tattattcatatattaataaaatgatttctttttatctttgtgttctttttaattatgtt 61025  T
Q  124 tttta 128  Q
    |||||    
T  61024 tttta 61020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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