View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4939-Insertion-12 (Length: 323)
Name: NF4939-Insertion-12
Description: NF4939
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4939-Insertion-12 |
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Alignment Details
Target: chr7 (Bit Score: 292; Significance: 1e-164; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 292; E-Value: 1e-164
Query Start/End: Original strand, 11 - 318
Target Start/End: Complemental strand, 42591692 - 42591386
Alignment:
| Q |
11 |
ccaagcttgaaaatgagaaagtaacttccacatctgcctgcaattttaattcaatattttttgaatttggttaaattttatattgtgtataaaattattg |
110 |
Q |
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| T |
42591692 |
ccaagcttgaaaatgagaaagtaacttccacatctgcctgcaattttaattcaatattttttgaatttggttaaattt-atattgtgtataaaattattg |
42591594 |
T |
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| Q |
111 |
aaggtgcaactaaatattataaaaaagaataatgtttaagtttgacacttattacttatattaaagtgtttaacccacctgggcagcagttattccagct |
210 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42591593 |
aaggtgtaactaaatattataaaaaagaataatgtttaagtttgacacttattacttatattaaagtgtttaacccacctgggcagcagttattccagct |
42591494 |
T |
|
| Q |
211 |
acttcaacatgattacccttttcaaacttttgattgttcatactaacttctttctctcttagtacattcaattcttcaacaggccattgtactaattgtc |
310 |
Q |
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||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42591493 |
acttcaacatgattacccttttcaagcttttgattgttcatactaacttctttctctcttagtacattcaattcttcaacaggccattgtactaattgtc |
42591394 |
T |
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| Q |
311 |
tttcagta |
318 |
Q |
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|||||||| |
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| T |
42591393 |
tttcagta |
42591386 |
T |
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