View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4939-Insertion-4 (Length: 769)

Name: NF4939-Insertion-4
Description: NF4939
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4939-Insertion-4
NF4939-Insertion-4
[»] chr1 (53 HSPs)
chr1 (7-769)||(2971043-2971817)
chr1 (643-732)||(14071238-14071327)
chr1 (645-732)||(25785962-25786049)
chr1 (651-732)||(13930710-13930791)
chr1 (643-732)||(25787199-25787288)
chr1 (649-762)||(50679826-50679939)
chr1 (644-727)||(44979428-44979511)
chr1 (645-734)||(3978038-3978127)
chr1 (653-726)||(48467263-48467336)
chr1 (644-732)||(13641250-13641338)
chr1 (648-728)||(13929292-13929372)
chr1 (646-732)||(47411483-47411569)
chr1 (645-723)||(47560133-47560211)
chr1 (644-750)||(49139794-49139900)
chr1 (646-728)||(52743015-52743097)
chr1 (645-734)||(3979346-3979435)
chr1 (648-732)||(26056182-26056266)
chr1 (646-714)||(44977216-44977284)
chr1 (644-732)||(52181340-52181428)
chr1 (645-732)||(14390252-14390339)
chr1 (645-732)||(16218513-16218600)
chr1 (645-732)||(20953282-20953369)
chr1 (646-729)||(34653430-34653513)
chr1 (646-732)||(21276989-21277075)
chr1 (634-732)||(26054881-26054978)
chr1 (641-707)||(52439345-52439411)
chr1 (646-719)||(33793774-33793847)
chr1 (640-725)||(47136729-47136814)
chr1 (639-728)||(48935149-48935238)
chr1 (644-728)||(2236806-2236890)
chr1 (646-738)||(49141525-49141617)
chr1 (648-728)||(52741485-52741565)
chr1 (665-732)||(2973043-2973110)
chr1 (701-768)||(40110651-40110718)
chr1 (646-728)||(35683050-35683132)
chr1 (646-728)||(48934236-48934318)
chr1 (646-707)||(38451547-38451608)
chr1 (647-732)||(47410980-47411065)
chr1 (649-725)||(9633773-9633849)
chr1 (645-732)||(13642592-13642679)
chr1 (709-760)||(24517621-24517672)
chr1 (664-727)||(38283779-38283842)
chr1 (649-732)||(40135372-40135455)
chr1 (644-726)||(1061493-1061575)
chr1 (686-732)||(9592273-9592319)
chr1 (646-732)||(16217435-16217521)
chr1 (646-728)||(48973193-48973275)
chr1 (664-749)||(8092611-8092696)
chr1 (663-732)||(14169631-14169700)
chr1 (695-732)||(19466240-19466277)
chr1 (649-726)||(34531661-34531738)
chr1 (646-727)||(37624610-37624691)
chr1 (644-681)||(50678359-50678396)
[»] chr7 (59 HSPs)
chr7 (642-751)||(33459559-33459668)
chr7 (646-738)||(40926548-40926640)
chr7 (646-732)||(22744741-22744827)
chr7 (648-737)||(19279642-19279731)
chr7 (644-732)||(22746355-22746443)
chr7 (648-738)||(18802418-18802508)
chr7 (642-732)||(22061830-22061920)
chr7 (647-732)||(4858379-4858464)
chr7 (645-769)||(18801209-18801333)
chr7 (645-732)||(40930412-40930499)
chr7 (645-728)||(43006379-43006462)
chr7 (646-768)||(19278348-19278470)
chr7 (646-732)||(25153653-25153739)
chr7 (644-762)||(33458303-33458420)
chr7 (645-751)||(45721782-45721887)
chr7 (640-741)||(17288246-17288346)
chr7 (644-732)||(13446693-13446781)
chr7 (645-732)||(36702985-36703073)
chr7 (645-732)||(43007684-43007771)
chr7 (645-732)||(43931901-43931988)
chr7 (642-768)||(28325064-28325189)
chr7 (664-728)||(7148097-7148161)
chr7 (644-732)||(25532139-25532226)
chr7 (648-728)||(38408313-38408393)
chr7 (644-732)||(46457063-46457151)
chr7 (644-732)||(46674969-46675057)
chr7 (645-732)||(1970807-1970894)
chr7 (650-729)||(4857200-4857279)
chr7 (646-725)||(22060458-22060537)
chr7 (649-732)||(41516379-41516462)
chr7 (664-751)||(45089485-45089571)
chr7 (642-759)||(6772719-6772836)
chr7 (645-727)||(7146775-7146856)
chr7 (644-750)||(41514991-41515095)
chr7 (644-728)||(41126232-41126316)
chr7 (664-732)||(43935198-43935266)
chr7 (649-728)||(38001502-38001581)
chr7 (649-747)||(25154956-25155054)
chr7 (646-728)||(41616619-41616701)
chr7 (646-732)||(46458748-46458834)
chr7 (635-680)||(4973497-4973542)
chr7 (646-707)||(29658673-29658734)
chr7 (645-734)||(43936173-43936262)
chr7 (429-477)||(9447403-9447451)
chr7 (664-732)||(19848869-19848937)
chr7 (644-732)||(38406011-38406099)
chr7 (648-732)||(43930316-43930400)
chr7 (645-681)||(44114741-44114777)
chr7 (665-732)||(14206687-14206754)
chr7 (665-732)||(14215377-14215444)
chr7 (669-732)||(24873632-24873695)
chr7 (673-732)||(46673512-46673571)
chr7 (640-682)||(10417058-10417100)
chr7 (646-728)||(14107827-14107909)
chr7 (646-728)||(14417784-14417866)
chr7 (646-732)||(36702772-36702858)
chr7 (640-681)||(10338399-10338440)
chr7 (644-681)||(18670589-18670626)
chr7 (648-681)||(35128248-35128281)
[»] chr8 (52 HSPs)
chr8 (645-732)||(31623900-31623987)
chr8 (644-762)||(24068323-24068441)
chr8 (645-750)||(37979-38084)
chr8 (646-737)||(41867946-41868037)
chr8 (644-728)||(10053783-10053867)
chr8 (644-732)||(37472396-37472484)
chr8 (644-732)||(38589814-38589901)
chr8 (647-725)||(36940075-36940153)
chr8 (646-732)||(38591042-38591128)
chr8 (640-748)||(29739662-29739770)
chr8 (645-737)||(41866888-41866980)
chr8 (645-732)||(16363847-16363934)
chr8 (649-732)||(19913490-19913573)
chr8 (640-731)||(35945473-35945564)
chr8 (645-732)||(43275744-43275831)
chr8 (645-732)||(43386737-43386824)
chr8 (645-732)||(36070172-36070259)
chr8 (645-732)||(36071413-36071500)
chr8 (645-732)||(36756058-36756145)
chr8 (649-727)||(21267162-21267240)
chr8 (646-732)||(39546712-39546798)
chr8 (647-732)||(37276278-37276363)
chr8 (645-732)||(31625419-31625505)
chr8 (660-751)||(39516513-39516604)
chr8 (672-747)||(44606160-44606235)
chr8 (646-732)||(37323343-37323429)
chr8 (646-727)||(37474076-37474157)
chr8 (646-719)||(39544925-39544998)
chr8 (648-732)||(117045-117129)
chr8 (644-728)||(43277960-43278044)
chr8 (645-728)||(39242-39325)
chr8 (644-707)||(11081092-11081155)
chr8 (645-732)||(13367085-13367172)
chr8 (640-710)||(3237697-3237767)
chr8 (646-728)||(10052099-10052181)
chr8 (650-732)||(14820192-14820274)
chr8 (646-732)||(29738286-29738372)
chr8 (667-732)||(7770932-7770997)
chr8 (645-762)||(7815037-7815154)
chr8 (645-738)||(36734573-36734666)
chr8 (649-726)||(37324729-37324806)
chr8 (644-732)||(24069481-24069569)
chr8 (641-732)||(37274876-37274968)
chr8 (649-732)||(4807364-4807447)
chr8 (701-768)||(22621133-22621200)
chr8 (646-732)||(35943902-35943989)
chr8 (645-732)||(39515193-39515280)
chr8 (645-732)||(45385829-45385916)
chr8 (709-751)||(22619953-22619995)
chr8 (642-728)||(41178471-41178557)
chr8 (644-681)||(3271891-3271928)
chr8 (644-681)||(30864541-30864578)
[»] chr4 (58 HSPs)
chr4 (641-732)||(37560334-37560425)
chr4 (643-750)||(46796043-46796150)
chr4 (645-732)||(33377399-33377486)
chr4 (640-738)||(15786941-15787039)
chr4 (645-727)||(39592329-39592411)
chr4 (646-768)||(56001267-56001389)
chr4 (647-732)||(27408759-27408844)
chr4 (631-728)||(39590921-39591018)
chr4 (642-738)||(15446699-15446795)
chr4 (645-728)||(6616250-6616333)
chr4 (645-732)||(31711086-31711173)
chr4 (645-732)||(33376212-33376299)
chr4 (645-732)||(37558992-37559079)
chr4 (641-728)||(47668636-47668723)
chr4 (646-732)||(11115015-11115101)
chr4 (646-728)||(29686251-29686333)
chr4 (649-751)||(38553927-38554029)
chr4 (646-732)||(43894100-43894186)
chr4 (644-737)||(15787532-15787625)
chr4 (646-719)||(35789638-35789711)
chr4 (644-732)||(86796-86884)
chr4 (644-732)||(10403452-10403539)
chr4 (652-732)||(35787797-35787877)
chr4 (645-732)||(11113736-11113823)
chr4 (645-760)||(40143648-40143763)
chr4 (643-750)||(44304996-44305103)
chr4 (646-725)||(52658906-52658985)
chr4 (701-751)||(3528240-3528290)
chr4 (645-731)||(21104346-21104432)
chr4 (646-732)||(28103521-28103607)
chr4 (650-732)||(40146658-40146740)
chr4 (649-762)||(47667177-47667289)
chr4 (649-732)||(1273468-1273550)
chr4 (649-732)||(26393162-26393245)
chr4 (641-732)||(38370272-38370363)
chr4 (646-728)||(96720-96802)
chr4 (648-726)||(10403277-10403354)
chr4 (646-727)||(27410722-27410802)
chr4 (641-726)||(30682710-30682795)
chr4 (644-728)||(12396913-12396997)
chr4 (645-732)||(29663637-29663723)
chr4 (644-707)||(37642601-37642664)
chr4 (664-751)||(38555292-38555379)
chr4 (645-727)||(44128374-44128456)
chr4 (646-707)||(54372741-54372802)
chr4 (646-726)||(15445431-15445511)
chr4 (640-728)||(29833361-29833449)
chr4 (649-728)||(28370680-28370759)
chr4 (649-732)||(30683062-30683145)
chr4 (645-732)||(53400179-53400266)
chr4 (645-728)||(53401490-53401573)
chr4 (693-732)||(55952867-55952906)
chr4 (642-732)||(3217644-3217734)
chr4 (645-691)||(29688050-29688096)
chr4 (650-728)||(46794839-46794917)
chr4 (645-738)||(11094520-11094613)
chr4 (643-748)||(15317847-15317951)
chr4 (644-681)||(30441602-30441639)
[»] chr6 (21 HSPs)
chr6 (646-732)||(8412351-8412437)
chr6 (643-732)||(5311271-5311360)
chr6 (643-732)||(31738355-31738444)
chr6 (648-726)||(8411083-8411161)
chr6 (647-732)||(33802052-33802137)
chr6 (645-732)||(9927600-9927687)
chr6 (647-728)||(18139526-18139607)
chr6 (644-732)||(22299938-22300026)
chr6 (649-732)||(27438788-27438871)
chr6 (645-732)||(31740307-31740394)
chr6 (646-748)||(12203290-12203392)
chr6 (645-738)||(33807683-33807776)
chr6 (646-732)||(34084169-34084253)
chr6 (640-748)||(12202311-12202419)
chr6 (646-726)||(19368559-19368639)
chr6 (645-728)||(8447215-8447298)
chr6 (645-728)||(8456019-8456102)
chr6 (702-768)||(16269616-16269682)
chr6 (645-682)||(15435686-15435723)
chr6 (645-732)||(22298598-22298685)
chr6 (647-750)||(27440192-27440295)
[»] chr5 (40 HSPs)
chr5 (644-732)||(12936137-12936225)
chr5 (648-739)||(27894051-27894142)
chr5 (646-732)||(18677971-18678057)
chr5 (644-732)||(12950295-12950383)
chr5 (644-732)||(19525323-19525411)
chr5 (644-751)||(224606-224713)
chr5 (644-750)||(5975749-5975855)
chr5 (646-732)||(19827175-19827261)
chr5 (643-732)||(1663179-1663268)
chr5 (641-750)||(5384363-5384472)
chr5 (649-760)||(223223-223335)
chr5 (648-732)||(1273086-1273170)
chr5 (645-732)||(5382936-5383023)
chr5 (644-762)||(21389148-21389264)
chr5 (645-719)||(6629725-6629799)
chr5 (644-734)||(42979441-42979531)
chr5 (632-709)||(328212-328289)
chr5 (649-758)||(18695656-18695765)
chr5 (644-732)||(10085880-10085968)
chr5 (648-732)||(12933748-12933832)
chr5 (646-726)||(19523978-19524058)
chr5 (649-732)||(22812422-22812505)
chr5 (644-707)||(30912307-30912370)
chr5 (646-732)||(7345425-7345511)
chr5 (648-750)||(15613502-15613604)
chr5 (643-737)||(26403299-26403393)
chr5 (645-707)||(30916178-30916240)
chr5 (644-710)||(41905168-41905234)
chr5 (644-728)||(4568013-4568097)
chr5 (648-732)||(12947909-12947993)
chr5 (648-760)||(5977080-5977194)
chr5 (643-768)||(15614959-15615084)
chr5 (644-724)||(1273383-1273463)
chr5 (643-762)||(8188205-8188322)
chr5 (645-681)||(19825868-19825904)
chr5 (645-728)||(5061022-5061105)
chr5 (645-732)||(21387631-21387718)
chr5 (644-707)||(33362627-33362690)
chr5 (646-728)||(19050744-19050826)
chr5 (647-732)||(40059363-40059448)
[»] chr2 (35 HSPs)
chr2 (644-732)||(7036959-7037047)
chr2 (648-748)||(35799509-35799609)
chr2 (648-737)||(41795982-41796071)
chr2 (645-750)||(42027187-42027292)
chr2 (646-738)||(37867751-37867843)
chr2 (646-734)||(42028991-42029079)
chr2 (645-732)||(7038367-7038454)
chr2 (647-732)||(23178917-23179002)
chr2 (647-732)||(23590174-23590259)
chr2 (643-728)||(29424651-29424736)
chr2 (646-732)||(23177668-23177755)
chr2 (646-732)||(23588925-23589012)
chr2 (645-750)||(6706920-6707025)
chr2 (644-768)||(2583545-2583669)
chr2 (645-728)||(3665218-3665301)
chr2 (645-732)||(4829459-4829546)
chr2 (646-732)||(2581798-2581884)
chr2 (649-747)||(10368405-10368503)
chr2 (644-722)||(11575500-11575578)
chr2 (646-732)||(12852881-12852967)
chr2 (646-732)||(12854139-12854225)
chr2 (644-748)||(43015532-43015636)
chr2 (643-738)||(12958409-12958503)
chr2 (636-719)||(21010542-21010625)
chr2 (645-732)||(42246585-42246672)
chr2 (646-748)||(15808075-15808177)
chr2 (646-732)||(42368343-42368428)
chr2 (645-750)||(25570887-25570992)
chr2 (647-726)||(3255919-3255997)
chr2 (673-728)||(21012119-21012174)
chr2 (645-732)||(32614379-32614466)
chr2 (648-738)||(28109898-28109988)
chr2 (646-680)||(42596555-42596589)
chr2 (647-728)||(2305536-2305617)
chr2 (669-734)||(6209097-6209162)
[»] scaffold1974 (1 HSPs)
scaffold1974 (645-732)||(663-750)
[»] scaffold1878 (1 HSPs)
scaffold1878 (645-732)||(524-611)
[»] scaffold0290 (2 HSPs)
scaffold0290 (645-732)||(9513-9600)
scaffold0290 (644-732)||(8372-8460)
[»] chr3 (57 HSPs)
chr3 (645-751)||(53809509-53809615)
chr3 (642-727)||(54752607-54752692)
chr3 (644-732)||(41387468-41387556)
chr3 (644-732)||(51825656-51825744)
chr3 (646-737)||(10987683-10987774)
chr3 (646-748)||(26798925-26799027)
chr3 (643-732)||(8372651-8372740)
chr3 (653-734)||(43101896-43101977)
chr3 (644-732)||(41386123-41386211)
chr3 (644-732)||(42633921-42634009)
chr3 (646-734)||(54653999-54654087)
chr3 (645-732)||(8371214-8371301)
chr3 (646-769)||(25583109-25583232)
chr3 (640-751)||(48252922-48253033)
chr3 (646-728)||(17350141-17350223)
chr3 (646-732)||(42632701-42632787)
chr3 (646-732)||(51401386-51401472)
chr3 (646-737)||(7820385-7820476)
chr3 (646-732)||(47808141-47808227)
chr3 (645-738)||(51400209-51400302)
chr3 (644-732)||(19621998-19622086)
chr3 (645-728)||(19622958-19623041)
chr3 (644-723)||(33563942-33564021)
chr3 (649-728)||(39133015-39133094)
chr3 (645-732)||(49334372-49334459)
chr3 (646-732)||(29536709-29536795)
chr3 (669-751)||(47766967-47767048)
chr3 (634-732)||(47855373-47855471)
chr3 (645-706)||(26797313-26797374)
chr3 (647-732)||(53808314-53808399)
chr3 (644-732)||(11220693-11220781)
chr3 (644-732)||(25585868-25585956)
chr3 (644-728)||(32973132-32973216)
chr3 (640-728)||(48035363-48035451)
chr3 (646-738)||(49122031-49122123)
chr3 (644-728)||(53047890-53047974)
chr3 (649-732)||(49898488-49898571)
chr3 (646-728)||(32974262-32974344)
chr3 (646-732)||(32980487-32980573)
chr3 (645-738)||(32979082-32979175)
chr3 (643-728)||(39288478-39288563)
chr3 (674-750)||(10986675-10986751)
chr3 (664-728)||(39287483-39287547)
chr3 (648-732)||(47806815-47806899)
chr3 (645-748)||(2225043-2225146)
chr3 (646-725)||(17345306-17345385)
chr3 (644-727)||(19579213-19579296)
chr3 (645-680)||(48338204-48338239)
chr3 (645-728)||(52292588-52292671)
chr3 (644-727)||(53342709-53342792)
chr3 (315-357)||(11816388-11816430)
chr3 (649-727)||(52293563-52293641)
chr3 (642-683)||(10817823-10817864)
chr3 (647-732)||(13077986-13078071)
chr3 (645-682)||(34903078-34903115)
chr3 (646-707)||(48336342-48336403)
chr3 (644-681)||(51213663-51213700)
[»] scaffold0045 (1 HSPs)
scaffold0045 (651-732)||(77216-77297)
[»] scaffold0046 (2 HSPs)
scaffold0046 (640-732)||(23395-23487)
scaffold0046 (643-728)||(24854-24939)
[»] scaffold0178 (1 HSPs)
scaffold0178 (644-750)||(2282-2388)
[»] scaffold0084 (2 HSPs)
scaffold0084 (645-728)||(11700-11783)
scaffold0084 (651-732)||(13239-13320)
[»] scaffold0024 (1 HSPs)
scaffold0024 (645-714)||(73039-73108)
[»] scaffold0025 (2 HSPs)
scaffold0025 (648-732)||(56735-56819)
scaffold0025 (654-762)||(54594-54702)
[»] scaffold0003 (2 HSPs)
scaffold0003 (649-732)||(48491-48574)
scaffold0003 (647-750)||(47066-47169)
[»] scaffold0051 (1 HSPs)
scaffold0051 (648-732)||(39936-40020)
[»] scaffold2127 (1 HSPs)
scaffold2127 (640-725)||(557-642)
[»] scaffold0013 (2 HSPs)
scaffold0013 (645-732)||(96154-96241)
scaffold0013 (645-727)||(96855-96937)
[»] scaffold0687 (1 HSPs)
scaffold0687 (645-762)||(6569-6686)
[»] scaffold0177 (1 HSPs)
scaffold0177 (643-728)||(1747-1832)
[»] scaffold0107 (1 HSPs)
scaffold0107 (315-357)||(21242-21284)
[»] scaffold0034 (1 HSPs)
scaffold0034 (642-680)||(98040-98078)
[»] scaffold1827 (1 HSPs)
scaffold1827 (695-728)||(1098-1131)
[»] scaffold0839 (1 HSPs)
scaffold0839 (644-681)||(18-55)


Alignment Details
Target: chr1 (Bit Score: 631; Significance: 0; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 631; E-Value: 0
Query Start/End: Original strand, 7 - 769
Target Start/End: Original strand, 2971043 - 2971817
Alignment:
Q  7 acataaagccaaaacattcctccggtgtttgctaatgtttcaaggaactatagattttgatttgaaggcaagaacaactaactggaatcagattatatcc 106  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  2971043 acataaagccaaaacattcctccagtgtttgctaatgtttcaaggaactatagattttgatttgaaggcaagaacaactaactggaatcatattatatcc 2971142  T
Q  107 aaaggtt------------ggaatttgctacctttatggccttcatgctccttcaagttatgtagtaaaagtttatccaacagataacttcttagcaaag 194  Q
    |||||||            ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  2971143 aaaggtttgagaaacctttggaatttgctacctttatggccttcatgctccttcaagttatgtagtaaaattttatccaacagataacttcttagcaaag 2971242  T
Q  195 caacccagacagtctacattattgtctctaaaaatgaccccacgagcaaaaaatttaggattcccaaggcaagcatcatcggtgttacgtttcacccatc 294  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  2971243 caacccagacagtctacattattgtctctacaaatgaccccacgagctaaaattttaggattcccaaggcaagcatcatcggtgttacgtttcacccatc 2971342  T
Q  295 cagggattggaggacgccaaatgacttctttgatagaaggggctctaggggggtggatgttgactctaaaggctctgataattgagaagtcatgcgttga 394  Q
    || ||||||||||| |||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  2971343 caaggattggaggatgccaaatgacttctttaatagaaggggctctagggg-gtggatgttgactctaaaggctctgataattgagaagtcatgcgttga 2971441  T
Q  395 agaagatgcagtctttaaagaattgttgtgagtgttttggttgctgctaattttgctccacatatcaatgaattgttgtgagtattttgatctgaatcta 494  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2971442 agaagatgtagtctttaaagaattgttgtgagtgttttggttgctgctaattttgctccacatatcaatgaattgttgtgagtattttgatctgaatcta 2971541  T
Q  495 caacaaacttcatagataattgaatataaattaataatataaggaatatcttaccttcttgaatatcaattccccatagttgtcttcatatatagagatt 594  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2971542 caacaaacttcatagataattgaatataaattaataatataaggaatatcttaccttcttgaatatcaattccccatagttgtcttcatatatagagatt 2971641  T
Q  595 ttgatgctagaaaccaaatgacagtgttgaaaaagaaaatatttgatttaaggcttaatacatcatttagtcccttaactta-ttttttgtattcactat 693  Q
    |||| | ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| |||||| | |||||| |    
T  2971642 ttgacggtagaaaccaaatggcagtgttgaaaaggaaaatatttgatttaaggcttaatacatcatttagttccttaacttatttttttattttcacttt 2971741  T
Q  694 agtcctctaactataaagtgtttcaatttggtcccataatttttcctctgtttactaaaatggtcctctttgttaa 769  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  | ||||||||||||||    
T  2971742 agtcctctaactataaagtgtctcaatttggtcccataatttttcctctgtttactaatgtagtcctctttgttaa 2971817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 643 - 732
Target Start/End: Complemental strand, 14071327 - 14071238
Alignment:
Q  643 taaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    |||||||||||||||||||| ||||||||| |||||||| || |||| | | |||||||||||||||||||| |||||||||||||||||    
T  14071327 taaggcttaatacatcatttggtcccttaatttatttttggttttcaatttggtcctctaactataaagtgtctcaatttggtcccataa 14071238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 645 - 732
Target Start/End: Original strand, 25785962 - 25786049
Alignment:
Q  645 aggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    |||||||||||||||||| |||||||||||||||||| || |||| | | |||| ||||||||||||||| |||||||||||||||||    
T  25785962 aggcttaatacatcatttggtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtctcaatttggtcccataa 25786049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 651 - 732
Target Start/End: Complemental strand, 13930791 - 13930710
Alignment:
Q  651 aatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    |||||||||||| |||||||||||||||||| || |||| | | |||||||||||||||||||| |||||||||||||||||    
T  13930791 aatacatcatttggtcccttaacttatttttggttttcaatttggtcctctaactataaagtgtctcaatttggtcccataa 13930710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 643 - 732
Target Start/End: Complemental strand, 25787288 - 25787199
Alignment:
Q  643 taaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    |||||||||||||||||||| |||||||||||||||||| || |||| | | |||| ||||||||||||||| ||||||||||| |||||    
T  25787288 taaggcttaatacatcatttggtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtctcaatttggtctcataa 25787199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 649 - 762
Target Start/End: Complemental strand, 50679939 - 50679826
Alignment:
Q  649 ttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataatttttcctctgtttac 748  Q
    |||||||||  ||| |||||||||||||||||| || || | | | ||||  |||||||||||||| ||||||||||||||||| | |||||| ||||||    
T  50679939 ttaatacatgctttggtcccttaacttatttttagtttttattttggtcccttaactataaagtgtctcaatttggtcccataagtcttcctccgtttac 50679840  T
Q  749 taaaatggtcctct 762  Q
    ||| ||||||||||    
T  50679839 taatatggtcctct 50679826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 644 - 727
Target Start/End: Original strand, 44979428 - 44979511
Alignment:
Q  644 aaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcc 727  Q
    |||||||||||||||||||| |||||||||||||||||||| |||||| | |||   |||||||||||||| |||| |||||||    
T  44979428 aaggcttaatacatcatttaatcccttaacttattttttgttttcactttggtctcttaactataaagtgtctcaaattggtcc 44979511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 645 - 734
Target Start/End: Original strand, 3978038 - 3978127
Alignment:
Q  645 aggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataatt 734  Q
    |||||||||||||||||| ||||||||||||||||||    |||| | | ||||| |||||||||||||| |||||||| ||||||||||    
T  3978038 aggcttaatacatcatttggtcccttaacttatttttgaatttcattttggtcctttaactataaagtgtctcaatttgatcccataatt 3978127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 653 - 726
Target Start/End: Original strand, 48467263 - 48467336
Alignment:
Q  653 tacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtc 726  Q
    |||||||||| ||||||||||||||||||||| |||| | | || | |||||||||||||||||||||||||||    
T  48467263 tacatcatttggtcccttaacttattttttgttttcaatttggttccctaactataaagtgtttcaatttggtc 48467336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 644 - 732
Target Start/End: Original strand, 13641250 - 13641338
Alignment:
Q  644 aaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    |||| |||||||||  |||  ||||||||||||||||| || |||||| | |||| ||||||||||||||| |||||||||||||||||    
T  13641250 aaggtttaatacatgctttgatcccttaacttatttttggttttcactttggtcccctaactataaagtgtctcaatttggtcccataa 13641338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 648 - 728
Target Start/End: Original strand, 13929292 - 13929372
Alignment:
Q  648 cttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtccc 728  Q
    ||||||||||||||| |||||||||||||||||| || |||| | | ||||  |||||||||||||| |||||||||||||    
T  13929292 cttaatacatcatttggtcccttaacttatttttggttttcaatttggtcccttaactataaagtgtctcaatttggtccc 13929372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 646 - 732
Target Start/End: Complemental strand, 47411569 - 47411483
Alignment:
Q  646 ggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    ||||||||||||||||| |||||||||||||||||  || |||  | | || | ||||||||||||||| |||||||||||||||||    
T  47411569 ggcttaatacatcatttggtcccttaacttattttcggttttccatttggttccctaactataaagtgtctcaatttggtcccataa 47411483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 645 - 723
Target Start/End: Original strand, 47560133 - 47560211
Alignment:
Q  645 aggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttg 723  Q
    |||||||||||||||||| |||||||| ||||||||   | |||||| | |||| ||||||||||||||||||||||||    
T  47560133 aggcttaatacatcatttggtcccttaccttattttcgattttcactttggtcccctaactataaagtgtttcaatttg 47560211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 644 - 750
Target Start/End: Original strand, 49139794 - 49139900
Alignment:
Q  644 aaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataatttttcctctg 743  Q
    |||| |||||||||||||| |||||||||||||||||| || |||  | | ||||  |||||||||||||| ||||||||||| ||||| | |||| | |    
T  49139794 aaggtttaatacatcatttggtcccttaacttatttttggttttcgttttggtcccataactataaagtgtctcaatttggtctcataaatcttccgcag 49139893  T
Q  744 tttacta 750  Q
    |||||||    
T  49139894 tttacta 49139900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 646 - 728
Target Start/End: Complemental strand, 52743097 - 52743015
Alignment:
Q  646 ggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtccc 728  Q
    ||||||||||||||||| |||||||| |||||||||  | |||||| | |||| ||||||||||||||| |||| ||||||||    
T  52743097 ggcttaatacatcatttggtcccttagcttatttttcattttcactttggtcccctaactataaagtgtctcaaattggtccc 52743015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 645 - 734
Target Start/End: Complemental strand, 3979435 - 3979346
Alignment:
Q  645 aggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataatt 734  Q
    |||||| |||||| |||| |||||||||||||||||| |  |||| | | ||||  |||||||||||||| |||||||||||||||||||    
T  3979435 aggcttgatacattatttggtcccttaacttatttttggatttcattttggtcccttaactataaagtgtctcaatttggtcccataatt 3979346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 648 - 732
Target Start/End: Complemental strand, 26056266 - 26056182
Alignment:
Q  648 cttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    ||||||||||  ||| |||||||||||||||||| |  |||| | | |||| ||||||||||||||| |||||||||||||||||    
T  26056266 cttaatacatactttggtcccttaacttatttttggatttcattttggtcccctaactataaagtgtctcaatttggtcccataa 26056182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 646 - 714
Target Start/End: Original strand, 44977216 - 44977284
Alignment:
Q  646 ggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgt 714  Q
    |||||||||||| |||| |||||||||||||||||| || |||||| | |||| |||||||||||||||    
T  44977216 ggcttaatacattatttggtcccttaacttatttttggttttcactttggtcccctaactataaagtgt 44977284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 644 - 732
Target Start/End: Complemental strand, 52181428 - 52181340
Alignment:
Q  644 aaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    ||||||||||| || |||| |||| |||||||||||||| | |||| | | |||||||||||||||||||| ||||||| ||| |||||    
T  52181428 aaggcttaatagataatttggtcctttaacttattttttattttcaatttggtcctctaactataaagtgtctcaatttagtctcataa 52181340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 645 - 732
Target Start/End: Original strand, 14390252 - 14390339
Alignment:
Q  645 aggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    |||||||||||||  ||| |||||||||||||||||||   |||| | | |||||||||||||||| ||| |||||||||| ||||||    
T  14390252 aggcttaatacatgctttggtcccttaacttattttttaatttcattttggtcctctaactataaaatgtctcaatttggttccataa 14390339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 645 - 732
Target Start/End: Complemental strand, 16218600 - 16218513
Alignment:
Q  645 aggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    |||||||||| ||||||||||||||||| |||||||| || |||  | |  ||| ||||||||||||| | |||||||||||||||||    
T  16218600 aggcttaatagatcatttagtcccttaatttatttttagttttctatctgatcccctaactataaagtatctcaatttggtcccataa 16218513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 645 - 732
Target Start/End: Original strand, 20953282 - 20953369
Alignment:
Q  645 aggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    |||||||||||||  ||| |||||||||||||||||| |  |||| | |||| || |||||||||||||| |||||||||||| ||||    
T  20953282 aggcttaatacatgctttggtcccttaacttatttttggatttcattttagttctataactataaagtgtctcaatttggtcctataa 20953369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 646 - 729
Target Start/End: Original strand, 34653430 - 34653513
Alignment:
Q  646 ggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtccca 729  Q
    |||| |||||||||||| |||||||||||||||||  || |||||| | ||||  |||||||||||||| |||||||| |||||    
T  34653430 ggctcaatacatcatttggtcccttaacttattttcggttttcactttggtcccttaactataaagtgtctcaatttgatccca 34653513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 646 - 732
Target Start/End: Original strand, 21276989 - 21277075
Alignment:
Q  646 ggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    |||||||||||| |||| |||||||||||||||||| || |||| | | ||   ||||||||||||| | |||||||||||||||||    
T  21276989 ggcttaatacattatttggtcccttaacttatttttggttttcaatttggttgcctaactataaagtatctcaatttggtcccataa 21277075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 634 - 732
Target Start/End: Original strand, 26054881 - 26054978
Alignment:
Q  634 tatttgatttaaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    |||| ||||| |||||||||||||  ||| |||||| ||||||||||| |  |||| | | |||| |||||||||||||||||||||||||| ||||||    
T  26054881 tattagattttaggcttaatacatgctttggtccct-aacttatttttggatttcattttggtcccctaactataaagtgtttcaatttggttccataa 26054978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 641 - 707
Target Start/End: Complemental strand, 52439411 - 52439345
Alignment:
Q  641 tttaaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactat 707  Q
    |||| ||||||||||||||||| ||||||||||||||||| ||| |||| | | |||||||||||||    
T  52439411 tttatggcttaatacatcatttggtcccttaacttattttctgttttcaatttggtcctctaactat 52439345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 646 - 719
Target Start/End: Original strand, 33793774 - 33793847
Alignment:
Q  646 ggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaa 719  Q
    |||||||||||||||||  ||||||||||||||||| || |||||| | |||| |||| |||||||||| ||||    
T  33793774 ggcttaatacatcatttgatcccttaacttatttttggttttcactttggtcccctaattataaagtgtctcaa 33793847  T

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Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 640 - 725
Target Start/End: Complemental strand, 47136814 - 47136729
Alignment:
Q  640 atttaaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggt 725  Q
    |||| ||||||||||||||||||  ||| ||||||||||||| || |||| |   |||| ||||||||||||||| ||||||||||    
T  47136814 attttaggcttaatacatcatttgatccattaacttatttttggttttcaattaggtcccctaactataaagtgtctcaatttggt 47136729  T

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Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 639 - 728
Target Start/End: Complemental strand, 48935238 - 48935149
Alignment:
Q  639 gatttaaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtccc 728  Q
    |||||||||||||||| ||  ||| |||||||||||||||||  |  |||| | | |||| ||||||||||||||| |||||||||||||    
T  48935238 gatttaaggcttaatatatgctttcgtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtccc 48935149  T

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Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 644 - 728
Target Start/End: Original strand, 2236806 - 2236890
Alignment:
Q  644 aaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtccc 728  Q
    ||||||||||||||  ||| |||||||||||||||||  |  |||| | | |||| ||||||||||||||| |||||||||||||    
T  2236806 aaggcttaatacatgctttggtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtccc 2236890  T

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Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 646 - 738
Target Start/End: Complemental strand, 49141617 - 49141525
Alignment:
Q  646 ggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataatttttc 738  Q
    ||||||||||||| ||| |||| |||| |||||||| || ||||||    |||  ||||||| ||||||||||| ||||||||||||||||||    
T  49141617 ggcttaatacatcgtttggtcctttaatttatttttggttttcacttcgatcccttaactattaagtgtttcaaattggtcccataatttttc 49141525  T

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Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 648 - 728
Target Start/End: Original strand, 52741485 - 52741565
Alignment:
Q  648 cttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtccc 728  Q
    ||||||| ||||||| |||||||||||||||||| || || | | | |||||||||||||||||||| |||| ||| ||||    
T  52741485 cttaatatatcatttggtcccttaacttatttttcgtttttattttggtcctctaactataaagtgtctcaaattgatccc 52741565  T

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Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 665 - 732
Target Start/End: Complemental strand, 2973110 - 2973043
Alignment:
Q  665 tcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    |||||||||||||||||||| |||| | ||||||  ||| |||||||||| |||||||||||| ||||    
T  2973110 tcccttaacttattttttgttttcattttagtcccttaattataaagtgtctcaatttggtcctataa 2973043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 701 - 768
Target Start/End: Complemental strand, 40110718 - 40110651
Alignment:
Q  701 taactataaagtgtttcaatttggtcccataatttttcctctgtttactaaaatggtcctctttgtta 768  Q
    ||||||| |||||| ||||||||||||||||| | |||||||||||| |||  ||||||||| |||||    
T  40110718 taactattaagtgtgtcaatttggtcccataagtcttcctctgtttattaatgtggtcctctctgtta 40110651  T

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Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 646 - 728
Target Start/End: Original strand, 35683050 - 35683132
Alignment:
Q  646 ggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtccc 728  Q
    ||||||||||||  ||| |||||||||||||||||  |  |||| | | |||| ||||||||||||||| |||||||||||||    
T  35683050 ggcttaatacatgctttggtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtccc 35683132  T

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Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 646 - 728
Target Start/End: Original strand, 48934236 - 48934318
Alignment:
Q  646 ggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtccc 728  Q
    ||||||||||||  |||| ||||||||||||||||  |  |||| | | |||| ||||||||||||||| |||||||||||||    
T  48934236 ggcttaatacatgttttaatcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtccc 48934318  T

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Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 646 - 707
Target Start/End: Original strand, 38451547 - 38451608
Alignment:
Q  646 ggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactat 707  Q
    ||||||||||||||||| ||||||||||||||||| ||| |||| | | |||| ||||||||    
T  38451547 ggcttaatacatcatttggtcccttaacttattttatgttttcaatttggtcccctaactat 38451608  T

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Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 647 - 732
Target Start/End: Original strand, 47410980 - 47411065
Alignment:
Q  647 gcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    ||||||||||| |||| ||||||||| ||||||||  | |||| | |  ||| ||||||||||||||| ||||||||||| |||||    
T  47410980 gcttaatacataatttggtcccttaaattatttttgattttcaatttgatcccctaactataaagtgtctcaatttggtctcataa 47411065  T

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Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 649 - 725
Target Start/End: Original strand, 9633773 - 9633849
Alignment:
Q  649 ttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggt 725  Q
    ||||||||| |||| |||| ||||||||||||| || |||| | | ||||  |||||||||||||| ||||||||||    
T  9633773 ttaatacataatttggtcctttaacttatttttggttttcattttggtcccttaactataaagtgtctcaatttggt 9633849  T

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Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 645 - 732
Target Start/End: Complemental strand, 13642679 - 13642592
Alignment:
Q  645 aggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    |||||||||||||  ||| |||| ||||||||||||| || |||| | | ||||||||| | |||||||| ||| |||| ||||||||    
T  13642679 aggcttaatacatgctttggtcctttaacttatttttggttttcattttggtcctctaattttaaagtgtctcagtttgatcccataa 13642592  T

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Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 709 - 760
Target Start/End: Complemental strand, 24517672 - 24517621
Alignment:
Q  709 aagtgtttcaatttggtcccataatttttcctctgtttactaaaatggtcct 760  Q
    |||||| ||||||||||||||||| | ||||||||||||||||  |||||||    
T  24517672 aagtgtgtcaatttggtcccataaatcttcctctgtttactaatgtggtcct 24517621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 664 - 727
Target Start/End: Complemental strand, 38283842 - 38283779
Alignment:
Q  664 gtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcc 727  Q
    ||||||||||||||||| | | |||| | |||||||||| |||| |||||| ||||||||||||    
T  38283842 gtcccttaacttattttattttttcagtttagtcctctatctattaagtgtgtcaatttggtcc 38283779  T

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Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 649 - 732
Target Start/End: Complemental strand, 40135455 - 40135372
Alignment:
Q  649 ttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    |||||||||  |||||||||||||||||||||| |  |||| | | ||||||||||| |||| ||| ||||||| ||| |||||    
T  40135455 ttaatacatgttttagtcccttaacttatttttagatttcattttggtcctctaactttaaaatgtctcaattttgtcacataa 40135372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 644 - 726
Target Start/End: Complemental strand, 1061575 - 1061493
Alignment:
Q  644 aaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtc 726  Q
    ||||||||||||||  |||  || |||||||||||||| |  |||| | |||||| ||||||||||||||| | |||||||||    
T  1061575 aaggcttaatacatgctttgctctcttaacttatttttggatttcattttagtcccctaactataaagtgtcttaatttggtc 1061493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 686 - 732
Target Start/End: Original strand, 9592273 - 9592319
Alignment:
Q  686 ttcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    |||||| | |||| |||||||||||||||||||||||| ||||||||    
T  9592273 ttcactttggtcccctaactataaagtgtttcaatttgatcccataa 9592319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 646 - 732
Target Start/End: Original strand, 16217435 - 16217521
Alignment:
Q  646 ggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    |||||||||||| ||||  | ||||||||||||||| || || | | |  || |||||||||||||||| |||||||||||| ||||    
T  16217435 ggcttaatacataatttgattccttaacttatttttggtttttaatttgatcatctaactataaagtgtctcaatttggtcctataa 16217521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 646 - 728
Target Start/End: Original strand, 48973193 - 48973275
Alignment:
Q  646 ggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtccc 728  Q
    ||||||||||||  ||| || ||||||||||||||  |  |||| | |||||| ||||||||||||||| |||||||| ||||    
T  48973193 ggcttaatacatgctttggttccttaacttattttcggatttcattttagtcccctaactataaagtgtctcaatttgatccc 48973275  T

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Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 664 - 749
Target Start/End: Original strand, 8092611 - 8092696
Alignment:
Q  664 gtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataatttttcctctgtttact 749  Q
    ||||||||||||||||| | |  ||| | ||||||  ||||||| |||||| |||||||||| |||||| | |||||| |||||||    
T  8092611 gtcccttaacttattttattttctcagtgtagtcccttaactattaagtgtatcaatttggttccataaatcttcctccgtttact 8092696  T

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Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 663 - 732
Target Start/End: Original strand, 14169631 - 14169700
Alignment:
Q  663 agtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    |||||||||||||||||| | |  ||| | | ||||| |||||||||| ||| |||||||||||||||||    
T  14169631 agtcccttaacttattttattttctcagtttggtcctttaactataaaatgtctcaatttggtcccataa 14169700  T

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Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 695 - 732
Target Start/End: Complemental strand, 19466277 - 19466240
Alignment:
Q  695 gtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    ||||| |||||||||||||| |||||||||||||||||    
T  19466277 gtcctttaactataaagtgtctcaatttggtcccataa 19466240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 649 - 726
Target Start/End: Original strand, 34531661 - 34531738
Alignment:
Q  649 ttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtc 726  Q
    |||||||||  ||| |||||||||||||||||  |  |||| | | |||||||||||||||| ||| |||||||||||    
T  34531661 ttaatacatgctttggtcccttaacttattttcggatttcattttggtcctctaactataaaatgtctcaatttggtc 34531738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 646 - 727
Target Start/End: Complemental strand, 37624691 - 37624610
Alignment:
Q  646 ggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcc 727  Q
    ||||||||||||||||||||||||||| ||| || || | ||||  || ||||  |||||| |||  |||||||||||||||    
T  37624691 ggcttaatacatcatttagtcccttaatttaattatttttttcaaaatggtcccttaactaaaaaacgtttcaatttggtcc 37624610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 644 - 681
Target Start/End: Original strand, 50678359 - 50678396
Alignment:
Q  644 aaggcttaatacatcatttagtcccttaacttattttt 681  Q
    |||||||||||||| |||| ||||||||||||||||||    
T  50678359 aaggcttaatacatgatttggtcccttaacttattttt 50678396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 70; Significance: 4e-31; HSPs: 59)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 642 - 751
Target Start/End: Complemental strand, 33459668 - 33459559
Alignment:
Q  642 ttaaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataatttttcctc 741  Q
    ||||||||||||||||||||||||||| |||||||||||| || |||| | | |||||||||||||||||||| ||||||||||||||||| | ||||||    
T  33459668 ttaaggcttaatacatcatttagtcccataacttatttttggttttcattttggtcctctaactataaagtgtctcaatttggtcccataagtcttcctc 33459569  T
Q  742 tgtttactaa 751  Q
     |||||||||    
T  33459568 cgtttactaa 33459559  T

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Target: chr7; HSP #2
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 646 - 738
Target Start/End: Complemental strand, 40926640 - 40926548
Alignment:
Q  646 ggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataatttttc 738  Q
    |||||||||||||||||||||||||||||||||||| || |||||| | |||| ||||||||||||||| |||||||||||| |||| |||||    
T  40926640 ggcttaatacatcatttagtcccttaacttatttttggttttcactttggtcccctaactataaagtgtctcaatttggtcctataaattttc 40926548  T

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Target: chr7; HSP #3
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 646 - 732
Target Start/End: Original strand, 22744741 - 22744827
Alignment:
Q  646 ggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    ||||||||||||||||| ||||||||||||||||||  | |||| | |||||| |||||||||||||||||||||||||||| ||||    
T  22744741 ggcttaatacatcatttggtcccttaacttatttttgattttcaatttagtcccctaactataaagtgtttcaatttggtcctataa 22744827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 648 - 737
Target Start/End: Complemental strand, 19279731 - 19279642
Alignment:
Q  648 cttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataattttt 737  Q
    ||||||||||| ||| |||||||||||||||||| || |||||| | |||| ||||||||||||||| ||||||||||||||||| ||||    
T  19279731 cttaatacatcgtttggtcccttaacttatttttggttttcactttggtcccctaactataaagtgtctcaatttggtcccataaatttt 19279642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 644 - 732
Target Start/End: Complemental strand, 22746443 - 22746355
Alignment:
Q  644 aaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    |||| ||||||||| |||| |||| |||||||||||||||| |||| | |||||| ||||||||||||||| |||||||||||||||||    
T  22746443 aaggtttaatacattatttggtcctttaacttattttttgttttcaatttagtcccctaactataaagtgtctcaatttggtcccataa 22746355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 648 - 738
Target Start/End: Complemental strand, 18802508 - 18802418
Alignment:
Q  648 cttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataatttttc 738  Q
    ||||||||||||||| ||||||||||||||||||||| |||| | |  ||| ||||||||||||||| ||||||| ||||||||| |||||    
T  18802508 cttaatacatcatttggtcccttaacttattttttgttttcattttgatcccctaactataaagtgtctcaatttagtcccataaattttc 18802418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 642 - 732
Target Start/End: Complemental strand, 22061920 - 22061830
Alignment:
Q  642 ttaaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    ||||||||||||||||||||| ||||||||||||||||| ||| |||| | | |||| |||||||||||  || |||||||||||||||||    
T  22061920 ttaaggcttaatacatcattttgtcccttaacttattttgtgttttcaatttggtcccctaactataaaacgtctcaatttggtcccataa 22061830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 647 - 732
Target Start/End: Complemental strand, 4858464 - 4858379
Alignment:
Q  647 gcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    |||||||||||||||| |||||||||||||||||| || |||||| |  ||| ||||||||||| ||| |||||||||||||||||    
T  4858464 gcttaatacatcatttggtcccttaacttatttttagttttcactttgatcccctaactataaaatgtctcaatttggtcccataa 4858379  T

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Target: chr7; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 645 - 769
Target Start/End: Original strand, 18801209 - 18801333
Alignment:
Q  645 aggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataatttttcctctgt 744  Q
    |||||||||||||  ||| ||||||||||||||||||    |||| | | |||| ||||||||||||||| ||||||||||||||||| | | |||||||    
T  18801209 aggcttaatacatgctttggtcccttaacttatttttgaatttcattttggtcccctaactataaagtgtctcaatttggtcccataaatatacctctgt 18801308  T
Q  745 ttactaaaatggtcctctttgttaa 769  Q
    |||| |||||| |||| | ||||||    
T  18801309 ttaccaaaatgatcctttctgttaa 18801333  T

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Target: chr7; HSP #10
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 645 - 732
Target Start/End: Original strand, 40930412 - 40930499
Alignment:
Q  645 aggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    |||||||||||||| |||  |||||| | |||||||| || |||||| | |||| |||||||||||||||||||||||||||||||||    
T  40930412 aggcttaatacatcgtttgatcccttgatttatttttggttttcactttggtcccctaactataaagtgtttcaatttggtcccataa 40930499  T

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Target: chr7; HSP #11
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 645 - 728
Target Start/End: Original strand, 43006379 - 43006462
Alignment:
Q  645 aggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtccc 728  Q
    |||||||||||||||||| |||||||||||||||||| || |||| | | |||| |||||||| |||||| |||||||||||||    
T  43006379 aggcttaatacatcatttggtcccttaacttatttttggttttcaatttggtcccctaactattaagtgtctcaatttggtccc 43006462  T

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Target: chr7; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 646 - 768
Target Start/End: Original strand, 19278348 - 19278470
Alignment:
Q  646 ggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataatttttcctctgtt 745  Q
    ||||||||||||||||| |||||||||||||||||| |  |||| | | ||||  ||| |||||||||| ||||||||||||||||||| |||  | |||    
T  19278348 ggcttaatacatcatttggtcccttaacttatttttggatttcattttggtcccttaattataaagtgtctcaatttggtcccataattcttctgccgtt 19278447  T
Q  746 tactaaaatggtcctctttgtta 768  Q
    |||||   |||||||||| ||||    
T  19278448 tactattttggtcctcttcgtta 19278470  T

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Target: chr7; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 646 - 732
Target Start/End: Original strand, 25153653 - 25153739
Alignment:
Q  646 ggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    ||||||||||||||||| |||||||||||||||||   | |||| | | |||| ||||||||||||||| |||||||||||||||||    
T  25153653 ggcttaatacatcatttggtcccttaacttattttcgattttcaatttggtcccctaactataaagtgtctcaatttggtcccataa 25153739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 644 - 762
Target Start/End: Original strand, 33458303 - 33458420
Alignment:
Q  644 aaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataatttttcctctg 743  Q
    ||||||||||||||||||| |||| ||||||||||||| || |||| | | ||||| |||||||||||||| |||| || ||||||||| | ||| || |    
T  33458303 aaggcttaatacatcatttggtcctttaacttatttttggttttcattttggtcctttaactataaagtgtctcaa-ttagtcccataagtcttcttccg 33458401  T
Q  744 tttactaaaatggtcctct 762  Q
    ||||||||  |||||||||    
T  33458402 tttactaatgtggtcctct 33458420  T

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Target: chr7; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 645 - 751
Target Start/End: Complemental strand, 45721887 - 45721782
Alignment:
Q  645 aggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataatttttcctctgt 744  Q
    |||||||||||||  ||| || ||||||||||||||| || |||| | | |||| ||||||||||||||| |||||||||| |||||| |||||||| ||    
T  45721887 aggcttaatacatgcttt-gttccttaacttatttttagttttcattttggtcccctaactataaagtgtctcaatttggttccataagttttcctccgt 45721789  T
Q  745 ttactaa 751  Q
    |||||||    
T  45721788 ttactaa 45721782  T

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Target: chr7; HSP #16
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 640 - 741
Target Start/End: Complemental strand, 17288346 - 17288246
Alignment:
Q  640 atttaaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataatttttcc 739  Q
    |||| |||||||| ||||| ||| ||||||||||||||||||||| || | | | |||| ||||||||||||||| ||||||||||||||||| | ||||    
T  17288346 attttaggcttaa-acatcgtttggtcccttaacttattttttgttttaattttggtcccctaactataaagtgtctcaatttggtcccataagtcttcc 17288248  T
Q  740 tc 741  Q
    ||    
T  17288247 tc 17288246  T

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Target: chr7; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 644 - 732
Target Start/End: Complemental strand, 13446781 - 13446693
Alignment:
Q  644 aaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    ||||||||||||||||||| ||| |||||||||||||| || |||||| | || ||  ||||||| ||||| |||||||||||||||||    
T  13446781 aaggcttaatacatcatttggtcacttaacttatttttggttttcactttggttcttcaactatatagtgtctcaatttggtcccataa 13446693  T

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Target: chr7; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 645 - 732
Target Start/End: Complemental strand, 36703073 - 36702985
Alignment:
Q  645 aggcttaatacatcatttagtcccttaacttattttttgta-ttcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    |||||||||||||||||| |||||||||||||||||||| | |||| | |||||| |||| | |||| ||| |||||||||||||||||    
T  36703073 aggcttaatacatcatttggtcccttaacttattttttggatttcattttagtcccctaaatttaaactgtctcaatttggtcccataa 36702985  T

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Target: chr7; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 645 - 732
Target Start/End: Complemental strand, 43007771 - 43007684
Alignment:
Q  645 aggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    |||||||||| ||||||| |||| | |||||||||||  | |||| | | |||||||||||||||||||| |||||||||||||||||    
T  43007771 aggcttaatatatcatttggtccttcaacttatttttgattttcaatttggtcctctaactataaagtgtctcaatttggtcccataa 43007684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 645 - 732
Target Start/End: Complemental strand, 43931988 - 43931901
Alignment:
Q  645 aggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    |||||||||||||||||| || |||||| ||||||||| | |||||| | ||||||||||||| ||  || |||||||||||||||||    
T  43931988 aggcttaatacatcatttggttccttaatttattttttattttcactctggtcctctaactattaaacgtatcaatttggtcccataa 43931901  T

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Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 642 - 768
Target Start/End: Original strand, 28325064 - 28325189
Alignment:
Q  642 ttaaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataatttttcctc 741  Q
    ||||||||||||||||||||| |||| ||||||||||||| || || | | | |||| |||||| |||||| | ||||||||||||||||| | ||| |     
T  28325064 ttaaggcttaatacatcatttggtcc-ttaacttatttttggttttaattttggtcccctaactttaaagtatctcaatttggtcccataagtattcatt 28325162  T
Q  742 tgtttactaaaatggtcctctttgtta 768  Q
    |||||| |||  ||||||| |||||||    
T  28325163 tgtttattaatgtggtcctttttgtta 28325189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 664 - 728
Target Start/End: Complemental strand, 7148161 - 7148097
Alignment:
Q  664 gtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtccc 728  Q
    ||||||||||||||||| ||| |||| | | ||| ||||||||||||||||||||||||||||||    
T  7148161 gtcccttaacttattttctgttttcaatttggtcatctaactataaagtgtttcaatttggtccc 7148097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 644 - 732
Target Start/End: Original strand, 25532139 - 25532226
Alignment:
Q  644 aaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    |||||||||||||||||||  ||| |||||||||||||||| |||| | | |||| |||||||||||||||||| |||| ||| |||||    
T  25532139 aaggcttaatacatcatttgatcctttaacttattttttgt-ttcaatttggtcccctaactataaagtgtttcgatttagtctcataa 25532226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 648 - 728
Target Start/End: Complemental strand, 38408393 - 38408313
Alignment:
Q  648 cttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtccc 728  Q
    ||||||| ||||||| ||||||||| ||||||||  | |||||| | |||||||||||||||||||| |||| ||||||||    
T  38408393 cttaatatatcatttggtcccttaatttatttttgattttcactttggtcctctaactataaagtgtctcaaattggtccc 38408313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 644 - 732
Target Start/End: Original strand, 46457063 - 46457151
Alignment:
Q  644 aaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    ||||||||||||||| ||| || ||||||||||||||| || |||| | |  |||  |||||||||||||| |||||||||||||||||    
T  46457063 aaggcttaatacatcgtttggttccttaacttatttttggttttcaatttgatcccttaactataaagtgtctcaatttggtcccataa 46457151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 644 - 732
Target Start/End: Complemental strand, 46675057 - 46674969
Alignment:
Q  644 aaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    |||||||||||||||||||  ||||||||||||||||| || |||| | |  |||  |||||||||||||| || ||||||||||||||    
T  46675057 aaggcttaatacatcatttgatcccttaacttatttttggttttcaatttgatcccttaactataaagtgtctcgatttggtcccataa 46674969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 645 - 732
Target Start/End: Original strand, 1970807 - 1970894
Alignment:
Q  645 aggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    |||||||||||||||| | ||| ||||| |||||||| || || ||| | || |  ||||||||||||||||||||||||||||||||    
T  1970807 aggcttaatacatcatctggtctcttaatttatttttggtttttactttggttccttaactataaagtgtttcaatttggtcccataa 1970894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 650 - 729
Target Start/End: Original strand, 4857200 - 4857279
Alignment:
Q  650 taatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtccca 729  Q
    |||||||||||||  ||||||||||||||||| || |||||| | |||| ||||||||||| ||| || |||||||||||    
T  4857200 taatacatcatttgatcccttaacttatttttggttttcactttggtcccctaactataaaatgtctcgatttggtccca 4857279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 646 - 725
Target Start/End: Original strand, 22060458 - 22060537
Alignment:
Q  646 ggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggt 725  Q
    ||||||||| ||||||| ||| ||||||||||||| ||| || | | | |||||||||||||||||||| ||||||||||    
T  22060458 ggcttaatatatcatttggtcacttaacttattttgtgtttttaatttggtcctctaactataaagtgtctcaatttggt 22060537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 649 - 732
Target Start/End: Complemental strand, 41516462 - 41516379
Alignment:
Q  649 ttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    |||||| ||||||| ||| ||||||||||||||||| || | | | |||| ||||||||||||||| | |||||||||||||||    
T  41516462 ttaatatatcatttggtctcttaacttattttttgttttaattttggtcccctaactataaagtgtcttaatttggtcccataa 41516379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 664 - 751
Target Start/End: Original strand, 45089485 - 45089571
Alignment:
Q  664 gtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataatttttcctctgtttactaa 751  Q
    |||||||||||||||||| || |||| | | |||||||| ||||||||||| |||||||  |||||||| |||||||| |||||||||    
T  45089485 gtcccttaacttatttttggttttcattttggtcctcta-ctataaagtgtctcaatttaatcccataaattttcctccgtttactaa 45089571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 642 - 759
Target Start/End: Original strand, 6772719 - 6772836
Alignment:
Q  642 ttaaggcttaatacatcatttagtcccttaacttattttttgtattc-actatagtcctctaactataaagtgtttcaatttggtcccataatttttcct 740  Q
    ||||||||||||||||  ||| |||||||||||||||||| | |||| | | | ||||| ||||| ||||  || ||||||||||||||||||||| |||    
T  6772719 ttaaggcttaatacatgctttggtcccttaacttattttt-gaattccattttggtcctttaactttaaaccgtctcaatttggtcccataattttacct 6772817  T
Q  741 ctgtttactaaaatggtcc 759  Q
    | ||||||| || ||||||    
T  6772818 ccgtttacttaagtggtcc 6772836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 645 - 727
Target Start/End: Original strand, 7146775 - 7146856
Alignment:
Q  645 aggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcc 727  Q
    |||| ||||||||| ||| |||||| |||||||||| ||| |||| | | |||| ||||||||||||||||||||||||||||    
T  7146775 aggcctaatacatcgtttggtccct-aacttattttctgttttcaatttggtcccctaactataaagtgtttcaatttggtcc 7146856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 644 - 750
Target Start/End: Original strand, 41514991 - 41515095
Alignment:
Q  644 aaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataatttttcctctg 743  Q
    ||||||||||| ||||||| ||||||||| |||||||| || || | | | || | ||||||||||||||||||||||||||||||||| | ||| | ||    
T  41514991 aaggcttaatatatcattt-gtcccttaatttatttttggttttaattttggttc-ctaactataaagtgtttcaatttggtcccataagtcttcatatg 41515088  T
Q  744 tttacta 750  Q
    |||||||    
T  41515089 tttacta 41515095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 644 - 728
Target Start/End: Original strand, 41126232 - 41126316
Alignment:
Q  644 aaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtccc 728  Q
    ||||||||||||||  ||| |||||||||||||||||  |  |||| | | |||| ||||||||||||||| |||||||||||||    
T  41126232 aaggcttaatacatgctttggtcccttaacttattttcagatttcattttggtcccctaactataaagtgtctcaatttggtccc 41126316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 664 - 732
Target Start/End: Original strand, 43935198 - 43935266
Alignment:
Q  664 gtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    |||||||||||||||||| |  |||| | | |||||||||||||||||||| ||||||||||| |||||    
T  43935198 gtcccttaacttatttttggatttcattttggtcctctaactataaagtgtctcaatttggtctcataa 43935266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 649 - 728
Target Start/End: Original strand, 38001502 - 38001581
Alignment:
Q  649 ttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtccc 728  Q
    |||||||||  ||| |||||||||||||||||     |||| | | ||||||||||||||||||||||||||||||||||    
T  38001502 ttaatacatgctttggtcccttaacttattttcgaatttcattttggtcctctaactataaagtgtttcaatttggtccc 38001581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 649 - 747
Target Start/End: Complemental strand, 25155054 - 25154956
Alignment:
Q  649 ttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataatttttcctctgttta 747  Q
    |||||||||||||| |||||||||||||||||| || |||| | |  |||  |||||||||||||| |||||||  || ||||| | ||| ||||||||    
T  25155054 ttaatacatcatttggtcccttaacttatttttggttttcaatttgatcccttaactataaagtgtctcaatttaatctcataaatcttcttctgttta 25154956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 646 - 728
Target Start/End: Original strand, 41616619 - 41616701
Alignment:
Q  646 ggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtccc 728  Q
    ||||||||||||  ||| |||||||||||||||||  |  |||| | | |||| ||||||||||||||| |||||||||||||    
T  41616619 ggcttaatacatgctttggtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtccc 41616701  T

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Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 646 - 732
Target Start/End: Complemental strand, 46458834 - 46458748
Alignment:
Q  646 ggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    ||||||||||||| ||| ||||||||| | ||||||  | |||| | | ||||  |||||||||||||| |||||||||||||||||    
T  46458834 ggcttaatacatcgtttggtcccttaagtaatttttgattttcaatttggtcccttaactataaagtgtctcaatttggtcccataa 46458748  T

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Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 635 - 680
Target Start/End: Original strand, 4973497 - 4973542
Alignment:
Q  635 atttgatttaaggcttaatacatcatttagtcccttaacttatttt 680  Q
    |||| |||| ||||||||||||| ||||||||||||||||||||||    
T  4973497 attttattttaggcttaatacattatttagtcccttaacttatttt 4973542  T

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Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 646 - 707
Target Start/End: Complemental strand, 29658734 - 29658673
Alignment:
Q  646 ggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactat 707  Q
    ||||||||||||||||| |||  ||||||||||||| || |||| | |||||||||||||||    
T  29658734 ggcttaatacatcatttggtcatttaacttatttttagttttcaatttagtcctctaactat 29658673  T

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Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 645 - 734
Target Start/End: Complemental strand, 43936262 - 43936173
Alignment:
Q  645 aggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataatt 734  Q
    |||||||||| ||  ||| |||||||||||||||||| |  |||| | | |||||||||||||||||| | | ||||||||| |||||||    
T  43936262 aggcttaatatatagtttggtcccttaacttatttttggatttcattttggtcctctaactataaagtttcttaatttggtctcataatt 43936173  T

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Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 429 - 477
Target Start/End: Complemental strand, 9447451 - 9447403
Alignment:
Q  429 ttttggttgctgctaattttgctccacatatcaatgaattgttgtgagt 477  Q
    ||||||||||||||||||||| |||| ||||||||| |||| |||||||    
T  9447451 ttttggttgctgctaattttgttccagatatcaatgtattgatgtgagt 9447403  T

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Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 664 - 732
Target Start/End: Complemental strand, 19848937 - 19848869
Alignment:
Q  664 gtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    |||||||||||||||||| |  |||| | | ||||  |||||||||||||| |||||||||||||||||    
T  19848937 gtcccttaacttatttttggatttcattttggtcccttaactataaagtgtctcaatttggtcccataa 19848869  T

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Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 644 - 732
Target Start/End: Original strand, 38406011 - 38406099
Alignment:
Q  644 aaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    |||||||||||||| |||| |||| |||| |||||||| || |||| | | |||| ||||||||||||||| ||||  |||| ||||||    
T  38406011 aaggcttaatacattatttggtcctttaatttatttttggttttcattttggtcccctaactataaagtgtctcaaactggttccataa 38406099  T

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Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 648 - 732
Target Start/End: Original strand, 43930316 - 43930400
Alignment:
Q  648 cttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    ||||||| ||||||| ||||||||||||||||||  | |||||| | |||| |||||||| ||  || |||||||||||| ||||    
T  43930316 cttaatatatcatttggtcccttaacttatttttgattttcactttggtcccctaactattaaacgtctcaatttggtcctataa 43930400  T

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Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 645 - 681
Target Start/End: Complemental strand, 44114777 - 44114741
Alignment:
Q  645 aggcttaatacatcatttagtcccttaacttattttt 681  Q
    |||||||||||||||||| ||||||||||||||||||    
T  44114777 aggcttaatacatcatttggtcccttaacttattttt 44114741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 665 - 732
Target Start/End: Original strand, 14206687 - 14206754
Alignment:
Q  665 tcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    |||||||| |||||||| || |||||| | |||  ||||||||||| |||||||||||||||| ||||    
T  14206687 tcccttaatttatttttggttttcactttggtcgcctaactataaaatgtttcaatttggtcctataa 14206754  T

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Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 665 - 732
Target Start/End: Original strand, 14215377 - 14215444
Alignment:
Q  665 tcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    |||||||| |||||||| || |||||| | |||  ||||||||||| |||||||||||||||| ||||    
T  14215377 tcccttaatttatttttggttttcactttggtcgcctaactataaaatgtttcaatttggtcctataa 14215444  T

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Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 669 - 732
Target Start/End: Complemental strand, 24873695 - 24873632
Alignment:
Q  669 ttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    |||||||||||||||| |||| | |  | | ||||||||||||||| |||||||||||||||||    
T  24873695 ttaacttattttttgttttcattttgatgccctaactataaagtgtctcaatttggtcccataa 24873632  T

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Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 673 - 732
Target Start/End: Original strand, 46673512 - 46673571
Alignment:
Q  673 cttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    ||||||||| || |||| | | |||| ||||| |||||||||||||||||||||||||||    
T  46673512 cttatttttggttttcaatttggtcccctaacaataaagtgtttcaatttggtcccataa 46673571  T

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Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 640 - 682
Target Start/End: Complemental strand, 10417100 - 10417058
Alignment:
Q  640 atttaaggcttaatacatcatttagtcccttaacttatttttt 682  Q
    |||||||||||||||||||| || ||||||||||||| |||||    
T  10417100 atttaaggcttaatacatcacttggtcccttaacttaattttt 10417058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 646 - 728
Target Start/End: Original strand, 14107827 - 14107909
Alignment:
Q  646 ggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtccc 728  Q
    ||||||||||||||||| |||  ||||||||||||| || |||| | | ||||  |||||||||||||| ||||  |||||||    
T  14107827 ggcttaatacatcatttggtcatttaacttatttttggttttcattttggtcccttaactataaagtgtctcaaagtggtccc 14107909  T

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Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 646 - 728
Target Start/End: Original strand, 14417784 - 14417866
Alignment:
Q  646 ggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtccc 728  Q
    ||||||||||||||||| |||  ||||||||||||| || |||| | | ||||  |||||||||||||| ||||  |||||||    
T  14417784 ggcttaatacatcatttggtcatttaacttatttttggttttcattttggtcccttaactataaagtgtctcaaagtggtccc 14417866  T

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Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 646 - 732
Target Start/End: Original strand, 36702772 - 36702858
Alignment:
Q  646 ggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    ||||||||||||  ||| |||||||||||||||||| |  |||| | | ||||  ||||| |||| ||| |||||||||||||||||    
T  36702772 ggcttaatacatgctttggtcccttaacttatttttagatttcattttggtcccttaactttaaactgtctcaatttggtcccataa 36702858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 640 - 681
Target Start/End: Complemental strand, 10338440 - 10338399
Alignment:
Q  640 atttaaggcttaatacatcatttagtcccttaacttattttt 681  Q
    ||||||||||||||||||  ||| ||||||||||||||||||    
T  10338440 atttaaggcttaatacatgctttggtcccttaacttattttt 10338399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 644 - 681
Target Start/End: Complemental strand, 18670626 - 18670589
Alignment:
Q  644 aaggcttaatacatcatttagtcccttaacttattttt 681  Q
    ||||||||||||||| ||| ||||||||||||||||||    
T  18670626 aaggcttaatacatcctttggtcccttaacttattttt 18670589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 648 - 681
Target Start/End: Complemental strand, 35128281 - 35128248
Alignment:
Q  648 cttaatacatcatttagtcccttaacttattttt 681  Q
    ||||||||||||||| ||||||||||||||||||    
T  35128281 cttaatacatcatttggtcccttaacttattttt 35128248  T

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Target: chr8 (Bit Score: 60; Significance: 3e-25; HSPs: 52)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 645 - 732
Target Start/End: Original strand, 31623900 - 31623987
Alignment:
Q  645 aggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    |||||||||||||||||| |||||||||||||||||| || |||| | | |||| |||||||||||||||||||||||||||||||||    
T  31623900 aggcttaatacatcatttggtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtttcaatttggtcccataa 31623987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 644 - 762
Target Start/End: Original strand, 24068323 - 24068441
Alignment:
Q  644 aaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataatttttcctctg 743  Q
    ||||||||||||||  ||| |||||||||||||||||| || |||| | | |||| ||||||||||||||| ||||||||||||||||| | |||||| |    
T  24068323 aaggcttaatacatgctttggtcccttaacttatttttggttttcattttggtcccctaactataaagtgtctcaatttggtcccataagtcttcctccg 24068422  T
Q  744 tttactaaaatggtcctct 762  Q
    ||||||||  |||||||||    
T  24068423 tttactaatttggtcctct 24068441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 645 - 750
Target Start/End: Original strand, 37979 - 38084
Alignment:
Q  645 aggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataatttttcctctgt 744  Q
    |||||||||||||| ||| ||||||||||||||||||||| || | | |||||| ||||||||||||||||| ||||||||| ||||| | |||||| ||    
T  37979 aggcttaatacatcgtttggtcccttaacttattttttgttttaattttagtcccctaactataaagtgtttgaatttggtctcataagtcttcctccgt 38078  T
Q  745 ttacta 750  Q
    ||||||    
T  38079 ttacta 38084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 646 - 737
Target Start/End: Complemental strand, 41868037 - 41867946
Alignment:
Q  646 ggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataattttt 737  Q
    ||||||||||||||||| ||||||||| |||||||| || |||||| | |||| ||||||||||||||| ||||||||||||||||| ||||    
T  41868037 ggcttaatacatcatttggtcccttaatttatttttagttttcactttggtcccctaactataaagtgtctcaatttggtcccataaatttt 41867946  T

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Target: chr8; HSP #5
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 644 - 728
Target Start/End: Complemental strand, 10053867 - 10053783
Alignment:
Q  644 aaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtccc 728  Q
    |||||||||||||||||||||||||||||||||||||| || |||||| | ||||  |||||||||||||| |||| ||||||||    
T  10053867 aaggcttaatacatcatttagtcccttaacttatttttggttttcactttggtcccttaactataaagtgtctcaagttggtccc 10053783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 644 - 732
Target Start/End: Original strand, 37472396 - 37472484
Alignment:
Q  644 aaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    ||||||||||||||||||| |||| ||||||||||||| || || | | | |||||||||||||||||||| |||||||||||||||||    
T  37472396 aaggcttaatacatcatttcgtcctttaacttatttttggtttttaatttggtcctctaactataaagtgtctcaatttggtcccataa 37472484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 644 - 732
Target Start/End: Original strand, 38589814 - 38589901
Alignment:
Q  644 aaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    ||||||||||||||||||| ||||||||||||| ||||||| |||| | | |||||||||||||||||||  |||||||||||||||||    
T  38589814 aaggcttaatacatcatttggtcccttaactta-tttttgttttcaatttggtcctctaactataaagtggctcaatttggtcccataa 38589901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 647 - 725
Target Start/End: Complemental strand, 36940153 - 36940075
Alignment:
Q  647 gcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggt 725  Q
    |||||||||||||||| |||||||||||||||||| || |||||| |  ||| ||||||||||||||||||||||||||    
T  36940153 gcttaatacatcatttggtcccttaacttatttttggttttcactttgatcccctaactataaagtgtttcaatttggt 36940075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 646 - 732
Target Start/End: Complemental strand, 38591128 - 38591042
Alignment:
Q  646 ggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    ||||||||||||||||| ||||||||||||||||||  | |||| | | |||| ||||||||||||||| |||||||||||||||||    
T  38591128 ggcttaatacatcatttggtcccttaacttatttttgattttcaatttggtcccctaactataaagtgtctcaatttggtcccataa 38591042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 640 - 748
Target Start/End: Complemental strand, 29739770 - 29739662
Alignment:
Q  640 atttaaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataatttttcc 739  Q
    |||| |||||||||||||||||| ||| ||||| |||||||| || |||| | |  ||| ||||||||||||||| ||||||||||||||||| |||||     
T  29739770 attttaggcttaatacatcatttggtctcttaatttatttttggttttcaatttgatcccctaactataaagtgtctcaatttggtcccataaattttct 29739671  T
Q  740 tctgtttac 748  Q
    || ||||||    
T  29739670 tccgtttac 29739662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 645 - 737
Target Start/End: Original strand, 41866888 - 41866980
Alignment:
Q  645 aggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataattttt 737  Q
    |||||||||||| ||||| ||||||||||||||||||  | |||||| |  |||  |||||||||||||||||||||||||||||||| ||||    
T  41866888 aggcttaatacaccatttggtcccttaacttatttttgattttcactttgatcccttaactataaagtgtttcaatttggtcccataaatttt 41866980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 645 - 732
Target Start/End: Complemental strand, 16363934 - 16363847
Alignment:
Q  645 aggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    |||||||||| || |||| |||||||||||||||||| || |||||| | |||||||||||||||||| | |||||||| ||||||||    
T  16363934 aggcttaatatataatttggtcccttaacttatttttggttttcactttggtcctctaactataaagtatctcaatttgatcccataa 16363847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 649 - 732
Target Start/End: Original strand, 19913490 - 19913573
Alignment:
Q  649 ttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    |||||||||| ||| ||||||||||||||||||    |||| | | ||||||||||||||||||||||||||||||||||||||    
T  19913490 ttaatacatcctttggtcccttaacttatttttgaatttcaatttggtcctctaactataaagtgtttcaatttggtcccataa 19913573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 640 - 731
Target Start/End: Complemental strand, 35945564 - 35945473
Alignment:
Q  640 atttaaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccata 731  Q
    ||||| |||||||||||| |||| ||||||||||||||||||||| |||| | ||||||  |||||||||| ||| ||| ||||||||||||    
T  35945564 atttatggcttaatacattatttggtcccttaacttattttttgttttcattttagtcccttaactataaaatgtctcactttggtcccata 35945473  T

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Target: chr8; HSP #15
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 645 - 732
Target Start/End: Original strand, 43275744 - 43275831
Alignment:
Q  645 aggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    |||||||||||||||||| ||| ||||||||||||||||| |||| | | || | ||||||||||||||| ||||||| |||||||||    
T  43275744 aggcttaatacatcatttggtctcttaacttattttttgttttcaatttggttccctaactataaagtgtctcaatttagtcccataa 43275831  T

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Target: chr8; HSP #16
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 645 - 732
Target Start/End: Complemental strand, 43386824 - 43386737
Alignment:
Q  645 aggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    |||||||||||||||| | |||||||||||||||||| || |||| | | |||| ||||||||||| ||| |||||||||||||||||    
T  43386824 aggcttaatacatcatatggtcccttaacttatttttggttttcagtttggtcccctaactataaaatgtctcaatttggtcccataa 43386737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 645 - 732
Target Start/End: Original strand, 36070172 - 36070259
Alignment:
Q  645 aggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    ||||||||||||||||||  |||||||| |||||||| || |||| | | |||| ||||||||||||||| |||||||| ||||||||    
T  36070172 aggcttaatacatcatttgatcccttaatttatttttggttttcaatttggtcccctaactataaagtgtctcaatttgatcccataa 36070259  T

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Target: chr8; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 645 - 732
Target Start/End: Complemental strand, 36071500 - 36071413
Alignment:
Q  645 aggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    |||||||||||||||||||||| |||||||||| |||||| |||| | | ||||  |||||||| ||| |||||| ||||||||||||    
T  36071500 aggcttaatacatcatttagtctcttaacttatattttgttttcaatttggtcccttaactatagagtatttcaaattggtcccataa 36071413  T

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Target: chr8; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 645 - 732
Target Start/End: Original strand, 36756058 - 36756145
Alignment:
Q  645 aggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    |||||||||||||||||| |||||||||||||||||| || || | | | ||||  |||||||||||||||||||| ||||| |||||    
T  36756058 aggcttaatacatcatttggtcccttaacttatttttagtttttaatttggtcccataactataaagtgtttcaatctggtcacataa 36756145  T

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Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 649 - 727
Target Start/End: Original strand, 21267162 - 21267240
Alignment:
Q  649 ttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcc 727  Q
    |||||||||  ||| ||| |||||||||||||| || |||||| | |||||||||||||||||||| ||||||||||||    
T  21267162 ttaatacattgtttggtcgcttaacttatttttggttttcactttggtcctctaactataaagtgtctcaatttggtcc 21267240  T

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Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 646 - 732
Target Start/End: Complemental strand, 39546798 - 39546712
Alignment:
Q  646 ggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    ||||||||||||| ||| || |||||||||||||| ||| |||||| | || | |||||| |||||||| |||||||||||||||||    
T  39546798 ggcttaatacatccttttgttccttaacttattttctgttttcactttggttccctaactttaaagtgtctcaatttggtcccataa 39546712  T

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Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 647 - 732
Target Start/End: Complemental strand, 37276363 - 37276278
Alignment:
Q  647 gcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    |||||||||||||||| ||||||||| ||||||||  | |||||| |  |||  |||||||||||||| |||||||||||||||||    
T  37276363 gcttaatacatcatttggtcccttaatttatttttgattttcactttgatcccttaactataaagtgtctcaatttggtcccataa 37276278  T

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Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 645 - 732
Target Start/End: Complemental strand, 31625505 - 31625419
Alignment:
Q  645 aggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    ||||||||||||||||||  ||| ||||||||||||| || |||| | | |||| |||| |||||||||| |||||||||||||||||    
T  31625505 aggcttaatacatcatttgatcc-ttaacttatttttggttttcaatttggtcccctaattataaagtgtctcaatttggtcccataa 31625419  T

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Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 660 - 751
Target Start/End: Complemental strand, 39516604 - 39516513
Alignment:
Q  660 tttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataatttttcctctgtttactaa 751  Q
    ||||||||||||| |||||||| || |||| | || ||| ||||| |||||| |||| ||||| ||||||||| |||||||| |||||||||    
T  39516604 tttagtcccttaaattatttttagttttcattttaatcccctaacaataaagcgttttaatttagtcccataagttttcctccgtttactaa 39516513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 672 - 747
Target Start/End: Original strand, 44606160 - 44606235
Alignment:
Q  672 acttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataatttttcctctgttta 747  Q
    |||||||||| || |||||| | |||| ||||||||| ||||||||||||||||||||||| | ||| ||||||||    
T  44606160 acttatttttggttttcactttggtcccctaactatatagtgtttcaatttggtcccataaatcttcttctgttta 44606235  T

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Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 646 - 732
Target Start/End: Original strand, 37323343 - 37323429
Alignment:
Q  646 ggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    ||||||||||||||||| ||||||||| |||||||| || |||| | | || | ||||||||||| ||| |||||||| ||||||||    
T  37323343 ggcttaatacatcatttggtcccttaatttatttttggttttcaatttggttccctaactataaaatgtctcaatttgatcccataa 37323429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 646 - 727
Target Start/End: Complemental strand, 37474157 - 37474076
Alignment:
Q  646 ggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcc 727  Q
    |||||||||||||||||  ||||||||||||||| | || |||| | | ||||  |||||||||||||| ||||||||||||    
T  37474157 ggcttaatacatcatttcatcccttaacttatttatggttttcaatttggtcccttaactataaagtgtctcaatttggtcc 37474076  T

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Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 646 - 719
Target Start/End: Original strand, 39544925 - 39544998
Alignment:
Q  646 ggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaa 719  Q
    ||||||||||||||||| ||||||||||||||||| ||| |||||| | |||   |||||||||||||| ||||    
T  39544925 ggcttaatacatcatttggtcccttaacttattttctgttttcactctggtcgcttaactataaagtgtctcaa 39544998  T

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Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 648 - 732
Target Start/End: Original strand, 117045 - 117129
Alignment:
Q  648 cttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    ||||||||||| |||  ||||||||||||||||| || |||| | | |||| |||| |||||| |||||||||||| ||||||||    
T  117045 cttaatacatcgtttgatcccttaacttatttttggttttcattttggtcccctaattataaaatgtttcaatttgatcccataa 117129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 644 - 728
Target Start/End: Complemental strand, 43278044 - 43277960
Alignment:
Q  644 aaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtccc 728  Q
    ||||||||||| |||||||  |||||||||||||||||| | || | | | |||| ||||||||||| ||| |||||||||||||    
T  43278044 aaggcttaatatatcatttgatcccttaacttattttttatttttaatttggtcccctaactataaaatgtctcaatttggtccc 43277960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 645 - 728
Target Start/End: Complemental strand, 39325 - 39242
Alignment:
Q  645 aggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtccc 728  Q
    |||||||||||||  ||||||||||||||||||| || |  |||| | | |||| |||||| |||| |||||||||||||||||    
T  39325 aggcttaatacatactttagtcccttaacttattattagatttcaatttggtcccctaactttaaactgtttcaatttggtccc 39242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 644 - 707
Target Start/End: Complemental strand, 11081155 - 11081092
Alignment:
Q  644 aaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactat 707  Q
    |||||||||||||||||||  |||||||||||||||| ||| |||| | | |||||||||||||    
T  11081155 aaggcttaatacatcatttgatcccttaacttattttctgttttcaatttggtcctctaactat 11081092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 645 - 732
Target Start/End: Complemental strand, 13367172 - 13367085
Alignment:
Q  645 aggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    ||||||||||||||||   |  |||||||||||||| | | |||||| | ||||  |||||||||||||||| |||||||||||||||    
T  13367172 aggcttaatacatcatccggatccttaacttattttattttttcactttggtcccttaactataaagtgttttaatttggtcccataa 13367085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 640 - 710
Target Start/End: Complemental strand, 3237767 - 3237697
Alignment:
Q  640 atttaaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaa 710  Q
    |||| |||||||||||||||||| |||||||||||||||||| |  |||| | |||||| |||||| ||||    
T  3237767 attttaggcttaatacatcatttggtcccttaacttatttttggatttcattttagtcccctaactttaaa 3237697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 646 - 728
Target Start/End: Original strand, 10052099 - 10052181
Alignment:
Q  646 ggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtccc 728  Q
    ||||||||| ||||||| ||||||||||||||| ||  | |||||| | |||| |||| |||||||||| |||| ||||||||    
T  10052099 ggcttaatatatcatttggtcccttaacttattcttgattttcactttggtcccctaattataaagtgtctcaaattggtccc 10052181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 650 - 732
Target Start/End: Original strand, 14820192 - 14820274
Alignment:
Q  650 taatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    |||||||||| || |||||||||||||||||| |  || | | | |||| ||||||||||||||| ||||||| |||||||||    
T  14820192 taatacatcaattggtcccttaacttatttttggattttaatttggtcccctaactataaagtgtctcaatttagtcccataa 14820274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 646 - 732
Target Start/End: Original strand, 29738286 - 29738372
Alignment:
Q  646 ggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    ||||||||||||| ||| ||||||||||||||||||| | |||| | | |||   |||||||||||||| ||||||| ||| |||||    
T  29738286 ggcttaatacatcgtttggtcccttaacttattttttattttcaatttggtctattaactataaagtgtctcaatttagtctcataa 29738372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 667 - 732
Target Start/End: Complemental strand, 7770997 - 7770932
Alignment:
Q  667 ccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    |||||||||||||||| | |||| | |  || |||||||||||||||||||||||||||| |||||    
T  7770997 ccttaacttattttttattttcattttgatcatctaactataaagtgtttcaatttggtctcataa 7770932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 645 - 762
Target Start/End: Original strand, 7815037 - 7815154
Alignment:
Q  645 aggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataatttttcctctgt 744  Q
    |||||||||||||  |||||| |||||| ||||||||  | |||| | | ||||||||| |||||| ||| |||||||||| | |||| | |||||| ||    
T  7815037 aggcttaatacatgctttagttccttaaattatttttgattttcattttggtcctctaattataaaatgtctcaatttggttctataagtcttcctccgt 7815136  T
Q  745 ttactaaaatggtcctct 762  Q
    ||  ||| ||||||||||    
T  7815137 ttcttaatatggtcctct 7815154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 645 - 738
Target Start/End: Complemental strand, 36734666 - 36734573
Alignment:
Q  645 aggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataatttttc 738  Q
    ||||||| |||||||||   |||||||||||||||||  | |||||| | |||  || ||||||| |||| ||||||||||||||||| |||||    
T  36734666 aggcttattacatcattggatcccttaacttatttttcattttcactttggtcgcctgactataatgtgtctcaatttggtcccataaattttc 36734573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 649 - 726
Target Start/End: Complemental strand, 37324806 - 37324729
Alignment:
Q  649 ttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtc 726  Q
    ||||||| ||||||| ||||||||||||||||| || || | | | |||| ||||||||||| ||| |||||||||||    
T  37324806 ttaatacgtcatttaatcccttaacttatttttggtttttaatttggtcccctaactataaaatgtctcaatttggtc 37324729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 644 - 732
Target Start/End: Complemental strand, 24069569 - 24069481
Alignment:
Q  644 aaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    |||||||||||  |  ||| |||||||||||||||||| || |||| | |  |||  |||||||||||||| |||||||||||||||||    
T  24069569 aaggcttaataatttctttggtcccttaacttatttttggttttcattttgatcccttaactataaagtgtctcaatttggtcccataa 24069481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 641 - 732
Target Start/End: Original strand, 37274876 - 37274968
Alignment:
Q  641 tttaaggcttaatacat-catttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    |||| |||||||||||| | ||| || | ||||||||||||| |  |||| | | |||||||||||||||||||| |||||||| ||||||||    
T  37274876 tttatggcttaatacatgcttttggttctttaacttatttttggatttcattttggtcctctaactataaagtgtctcaatttgttcccataa 37274968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 649 - 732
Target Start/End: Original strand, 4807364 - 4807447
Alignment:
Q  649 ttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    |||||||||||||  |||| |||||||||||||  | || | | | |||| |||||||||| || |||||||||||||||||||    
T  4807364 ttaatacatcattcggtcctttaacttatttttgatttttaatttggtcccctaactataacgtttttcaatttggtcccataa 4807447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 701 - 768
Target Start/End: Complemental strand, 22621200 - 22621133
Alignment:
Q  701 taactataaagtgtttcaatttggtcccataatttttcctctgtttactaaaatggtcctctttgtta 768  Q
    ||||||| ||||||  |||||||||||||||| | |||||||||||| |||  ||||||||| |||||    
T  22621200 taactattaagtgtggcaatttggtcccataagtcttcctctgtttattaatgtggtcctctctgtta 22621133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 646 - 732
Target Start/End: Original strand, 35943902 - 35943989
Alignment:
Q  646 ggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactat-aaagtgtttcaatttggtcccataa 732  Q
    ||||||||||||| ||| |||||||||||||||||| || |||| | | ||||  ||| ||| ||| ||| |||||||||||||||||    
T  35943902 ggcttaatacatcgtttggtcccttaacttatttttggttttcattttggtcccttaattataaaaatgtctcaatttggtcccataa 35943989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 645 - 732
Target Start/End: Original strand, 39515193 - 39515280
Alignment:
Q  645 aggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    ||||||||| |||  ||| |||||||||||||||||| || |||| | |  ||| || |||||||||||| ||||||||||| |||||    
T  39515193 aggcttaatgcatgttttggtcccttaacttatttttggttttcattttgatcccctgactataaagtgtctcaatttggtctcataa 39515280  T

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Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 645 - 732
Target Start/End: Complemental strand, 45385916 - 45385829
Alignment:
Q  645 aggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    |||||||||||||  ||| |||||||||||||||||| |  |||| | | ||||  ||| ||||||||||||||||||| ||| ||||    
T  45385916 aggcttaatacatgctttggtcccttaacttatttttggatttcattttggtcccataattataaagtgtttcaatttgatcctataa 45385829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 709 - 751
Target Start/End: Original strand, 22619953 - 22619995
Alignment:
Q  709 aagtgtttcaatttggtcccataatttttcctctgtttactaa 751  Q
    |||||| ||||||||||||||||| | ||||||||||||||||    
T  22619953 aagtgtgtcaatttggtcccataaatcttcctctgtttactaa 22619995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 642 - 728
Target Start/End: Original strand, 41178471 - 41178557
Alignment:
Q  642 ttaaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtccc 728  Q
    ||||||||||||| ||  ||| |||||||||||||||||||   |||| | |  |||||||||| |||| ||| |||||||||||||    
T  41178471 ttaaggcttaatatatgttttggtcccttaacttatttttttatttcaatttgatcctctaactttaaattgtctcaatttggtccc 41178557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 644 - 681
Target Start/End: Original strand, 3271891 - 3271928
Alignment:
Q  644 aaggcttaatacatcatttagtcccttaacttattttt 681  Q
    |||||||||||||| |||| ||||||||||||||||||    
T  3271891 aaggcttaatacatgatttggtcccttaacttattttt 3271928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 644 - 681
Target Start/End: Complemental strand, 30864578 - 30864541
Alignment:
Q  644 aaggcttaatacatcatttagtcccttaacttattttt 681  Q
    |||||||||||||| |||| ||||||||||||||||||    
T  30864578 aaggcttaatacatgatttggtcccttaacttattttt 30864541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 60; Significance: 3e-25; HSPs: 58)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 641 - 732
Target Start/End: Complemental strand, 37560425 - 37560334
Alignment:
Q  641 tttaaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    |||||||||||||||||||||| |||||||||||||||||| || |||| | | |||| ||||||||||||||| |||||||||||||||||    
T  37560425 tttaaggcttaatacatcatttggtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtctcaatttggtcccataa 37560334  T

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Target: chr4; HSP #2
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 643 - 750
Target Start/End: Complemental strand, 46796150 - 46796043
Alignment:
Q  643 taaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataatttttcctct 742  Q
    |||||||||||||||| ||| |||||||||||||||||| || || | | | |||| ||||||||||||||| ||||||||||||||||| | ||||||     
T  46796150 taaggcttaatacatcgtttggtcccttaacttatttttggttttaattttggtcccctaactataaagtgtctcaatttggtcccataagtcttcctcc 46796051  T
Q  743 gtttacta 750  Q
    ||||||||    
T  46796050 gtttacta 46796043  T

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Target: chr4; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 645 - 732
Target Start/End: Complemental strand, 33377486 - 33377399
Alignment:
Q  645 aggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    |||||||||||||||||| ||||||||||||||||||  | |||| | | |||| ||||||||||||||| |||||||||||||||||    
T  33377486 aggcttaatacatcatttggtcccttaacttatttttgattttcaatttggtcccctaactataaagtgtctcaatttggtcccataa 33377399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 640 - 738
Target Start/End: Original strand, 15786941 - 15787039
Alignment:
Q  640 atttaaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataatttttc 738  Q
    |||| |||||||||||||||||| |||| |||||||||||||||| |||| | |  ||| ||||||||||| ||| ||||||||||||||||| |||||    
T  15786941 attttaggcttaatacatcatttggtccattaacttattttttgttttcattttgttcccctaactataaactgtctcaatttggtcccataacttttc 15787039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 645 - 727
Target Start/End: Complemental strand, 39592411 - 39592329
Alignment:
Q  645 aggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcc 727  Q
    |||||||||| ||||||| ||||||||||||||||| ||| |||||| |||||| ||||||||||||||| |||| |||||||    
T  39592411 aggcttaatatatcatttggtcccttaacttattttatgttttcactttagtcccctaactataaagtgtctcaaattggtcc 39592329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 646 - 768
Target Start/End: Complemental strand, 56001389 - 56001267
Alignment:
Q  646 ggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataatttttcctctgtt 745  Q
    ||||||||||||  ||| ||||||||||||||||||| | |||| | | | || ||||||||||||||| |||||||||||| ||||  ||||||| |||    
T  56001389 ggcttaatacatgctttggtcccttaacttattttttattttcattttggccccctaactataaagtgtctcaatttggtcctataagctttcctccgtt 56001290  T
Q  746 tactaaaatggtcctctttgtta 768  Q
    ||||||  |||||||||| ||||    
T  56001289 tactaatgtggtcctcttcgtta 56001267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 647 - 732
Target Start/End: Original strand, 27408759 - 27408844
Alignment:
Q  647 gcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    |||||||||||||||| |||||||||||||||||  || |||| | | ||| |||||||||||||||| |||||||||||||||||    
T  27408759 gcttaatacatcatttggtcccttaacttattttcagttttcaatttggtcatctaactataaagtgtctcaatttggtcccataa 27408844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 631 - 728
Target Start/End: Original strand, 39590921 - 39591018
Alignment:
Q  631 aaatatttgatttaaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtccc 728  Q
    |||||| | ||| ||||||||||||||||||| |||||||||||||||||| || |||||| | |||| ||||||||||||||| ||||  |||||||    
T  39590921 aaatatataattaaaggcttaatacatcatttggtcccttaacttatttttggttttcactttggtcccctaactataaagtgtctcaaactggtccc 39591018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 642 - 738
Target Start/End: Complemental strand, 15446795 - 15446699
Alignment:
Q  642 ttaaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataatttttc 738  Q
    ||||||||||||||||  ||| |||||||||||||||||| |  |||| | | ||| ||||| |||||||||||||||||||||||||||| |||||    
T  15446795 ttaaggcttaatacatgctttggtcccttaacttatttttggatttcattttggtcatctaattataaagtgtttcaatttggtcccataaattttc 15446699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 645 - 728
Target Start/End: Complemental strand, 6616333 - 6616250
Alignment:
Q  645 aggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtccc 728  Q
    |||||||||||||||||| |||||||||||||||||  || |||||| | |||| ||||||||||||||| |||| ||||||||    
T  6616333 aggcttaatacatcatttggtcccttaacttattttccgttttcactttggtcccctaactataaagtgtctcaaattggtccc 6616250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 645 - 732
Target Start/End: Original strand, 31711086 - 31711173
Alignment:
Q  645 aggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    |||||||||||||||||| |||||||||||||||||| |  |||| | | ||||| |||||||||||||| ||||||||||| |||||    
T  31711086 aggcttaatacatcatttggtcccttaacttatttttggatttcattttggtcctttaactataaagtgtctcaatttggtctcataa 31711173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 645 - 732
Target Start/End: Original strand, 33376212 - 33376299
Alignment:
Q  645 aggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    |||||||||||||||||| ||| |||||||||||||| || |||| | |||| | |||| |||||||||| |||||||||||||||||    
T  33376212 aggcttaatacatcatttggtctcttaacttatttttggttttcaatttagtgccctaattataaagtgtctcaatttggtcccataa 33376299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 645 - 732
Target Start/End: Original strand, 37558992 - 37559079
Alignment:
Q  645 aggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    |||||||||||||||||| || ||||||||||||||| || |||| | | |||| ||||||||||| ||| |||||||||||||||||    
T  37558992 aggcttaatacatcatttggttccttaacttatttttggttttcaatttggtcccctaactataaaatgtctcaatttggtcccataa 37559079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 641 - 728
Target Start/End: Complemental strand, 47668723 - 47668636
Alignment:
Q  641 tttaaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtccc 728  Q
    |||| ||||||||||||||||| |||| |||||||||||| ||| |||||| | |||| ||||||||||||||| |||| ||||||||    
T  47668723 tttatggcttaatacatcatttggtcctttaacttattttctgttttcactttggtcccctaactataaagtgtctcaaattggtccc 47668636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 646 - 732
Target Start/End: Complemental strand, 11115101 - 11115015
Alignment:
Q  646 ggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    ||||||||||||||||| |||||||||||||||||  || |||| | | |||| ||||||||||||| | |||||||||||||||||    
T  11115101 ggcttaatacatcatttggtcccttaacttattttcagttttcattttggtcccctaactataaagtatctcaatttggtcccataa 11115015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 646 - 728
Target Start/End: Original strand, 29686251 - 29686333
Alignment:
Q  646 ggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtccc 728  Q
    |||||||||||||||||||||||||||||||||||| || |||||| | ||||  |||||||||| ||| |||| ||||||||    
T  29686251 ggcttaatacatcatttagtcccttaacttatttttggttttcactttggtcccttaactataaattgtctcaaattggtccc 29686333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 649 - 751
Target Start/End: Original strand, 38553927 - 38554029
Alignment:
Q  649 ttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataatttttcctctgtttac 748  Q
    |||||||||||||| ||||||||| ||||||| ||| || | | | ||| |||||||||||||||| ||||||||||| ||||| | |||||| ||||||    
T  38553927 ttaatacatcatttggtcccttaatttattttctgtttttattttggtcttctaactataaagtgtctcaatttggtctcataagtcttcctccgtttac 38554026  T
Q  749 taa 751  Q
    |||    
T  38554027 taa 38554029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 646 - 732
Target Start/End: Original strand, 43894100 - 43894186
Alignment:
Q  646 ggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    ||||||||||||||| |||||||||||||||||||| || |||| | | |||| ||||||||||| ||| ||||||||||| |||||    
T  43894100 ggcttaatacatcatatagtcccttaacttatttttggttttcagtttggtcccctaactataaaatgtctcaatttggtcacataa 43894186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 644 - 737
Target Start/End: Complemental strand, 15787625 - 15787532
Alignment:
Q  644 aaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataattttt 737  Q
    ||||||||||| |||||||  | |||||| ||||||||||| |||| | | |||| ||||||||||||||| ||||||||||||||||| ||||    
T  15787625 aaggcttaatatatcatttttttccttaatttattttttgttttcattttggtcccctaactataaagtgtctcaatttggtcccataactttt 15787532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 646 - 719
Target Start/End: Complemental strand, 35789711 - 35789638
Alignment:
Q  646 ggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaa 719  Q
    ||||||||||||||||||||| |||||||||||||| || |||||| | ||||  |||||||||||||||||||    
T  35789711 ggcttaatacatcatttagtctcttaacttatttttggttttcactttggtcccgtaactataaagtgtttcaa 35789638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 644 - 732
Target Start/End: Original strand, 86796 - 86884
Alignment:
Q  644 aaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    ||||||||||||||||||||||| ||||| |||||||| || |||||| | || | ||||||||||||  | |||||||||||||||||    
T  86796 aaggcttaatacatcatttagtctcttaatttatttttagttttcactttggttccctaactataaagcatctcaatttggtcccataa 86884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 644 - 732
Target Start/End: Complemental strand, 10403539 - 10403452
Alignment:
Q  644 aaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    ||||||||||||||||||||||| |||||||||||||| || |||||| | |   |||||||||||||||| ||||||||||| |||||    
T  10403539 aaggcttaatacatcatttagtctcttaacttatttttggttttcact-ttgatttctaactataaagtgtatcaatttggtctcataa 10403452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 652 - 732
Target Start/End: Original strand, 35787797 - 35787877
Alignment:
Q  652 atacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    |||||| |||| ||| | |||||||||||| || |||||| | |||||||||||||||| |||||||||||||||||||||    
T  35787797 atacattatttggtctcataacttatttttggttttcactttggtcctctaactataaaatgtttcaatttggtcccataa 35787877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 645 - 732
Target Start/End: Original strand, 11113736 - 11113823
Alignment:
Q  645 aggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    |||||||||||||||||| ||| |||||||||||||  || |||| | ||||||  |||||||||||||| ||||||||||| |||||    
T  11113736 aggcttaatacatcatttggtcacttaacttattttcggttttcattttagtcccttaactataaagtgtctcaatttggtctcataa 11113823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 645 - 760
Target Start/End: Original strand, 40143648 - 40143763
Alignment:
Q  645 aggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataatttttcctctgt 744  Q
    ||||| ||||||| |||| ||| |||||||||||||| || |||| | |||||| ||||||||||||||| |||||||| || ||||| | ||| || ||    
T  40143648 aggctcaatacattatttggtctcttaacttatttttagttttcattttagtcccctaactataaagtgtctcaatttgctctcataactcttcatccgt 40143747  T
Q  745 ttactaaaatggtcct 760  Q
    |||||||  |||||||    
T  40143748 ttactaatgtggtcct 40143763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 643 - 750
Target Start/End: Complemental strand, 44305103 - 44304996
Alignment:
Q  643 taaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataatttttcctct 742  Q
    |||||||||||| |||||||  | | |||||||||||||||| |||| | | |||| ||||||| ||||||| |||||||||||| |||| | |||| ||    
T  44305103 taaggcttaatatatcatttgattcattaacttattttttgttttcaatttggtcccctaactacaaagtgtctcaatttggtcctataaatcttccgct 44305004  T
Q  743 gtttacta 750  Q
    ||||||||    
T  44305003 gtttacta 44304996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 646 - 725
Target Start/End: Original strand, 52658906 - 52658985
Alignment:
Q  646 ggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggt 725  Q
    ||||||||||||  ||| ||||||||||||||||||| | |||||| | |||| ||||||||||| ||||||||||||||    
T  52658906 ggcttaatacatgttttggtcccttaacttattttttattttcactttggtcccctaactataaaatgtttcaatttggt 52658985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 701 - 751
Target Start/End: Original strand, 3528240 - 3528290
Alignment:
Q  701 taactataaagtgtttcaatttggtcccataatttttcctctgtttactaa 751  Q
    |||||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  3528240 taactataaagtgtctcaatttggtcccataagttttcctctgtttactaa 3528290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 645 - 731
Target Start/End: Complemental strand, 21104432 - 21104346
Alignment:
Q  645 aggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccata 731  Q
    |||||||||| ||||||| || |||||| ||||||||||| |||| | | |||| ||||||||||||||| ||||||||||| ||||    
T  21104432 aggcttaatatatcatttggttccttaaattattttttgttttcattttggtcccctaactataaagtgtctcaatttggtctcata 21104346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 646 - 732
Target Start/End: Complemental strand, 28103607 - 28103521
Alignment:
Q  646 ggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    ||||||| ||||||||| |||||||||||||||||| |  |||| | | ||||  |||||||||||||| |||||||||||||||||    
T  28103607 ggcttaacacatcatttggtcccttaacttatttttggatttcattttggtcccttaactataaagtgtctcaatttggtcccataa 28103521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 650 - 732
Target Start/End: Complemental strand, 40146740 - 40146658
Alignment:
Q  650 taatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    ||||||||||||| |||||||||| ||||||| || || | | | ||||| |||||||||||||| |||||||||||||||||    
T  40146740 taatacatcatttggtcccttaacgtatttttggtttttattttggtcctttaactataaagtgtctcaatttggtcccataa 40146658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 649 - 762
Target Start/End: Original strand, 47667177 - 47667289
Alignment:
Q  649 ttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataatttttcctctgtttac 748  Q
    |||||||||  ||| |||| ||||||||||||| || || | | | || ||||||||||||||||| ||||||||||| ||||| | |||||| ||||||    
T  47667177 ttaatacatattttggtcctttaacttatttttggtttttattttggt-ctctaactataaagtgtctcaatttggtctcataagtcttcctccgtttac 47667275  T
Q  749 taaaatggtcctct 762  Q
    ||| ||||||||||    
T  47667276 taatatggtcctct 47667289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 649 - 732
Target Start/End: Complemental strand, 1273550 - 1273468
Alignment:
Q  649 ttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    |||||| ||||||| |||||||||||||||||| || || | | | |||| ||||||||||||||| |||||||||||||||||    
T  1273550 ttaatatatcatttggtcccttaacttatttttggttttaatt-tggtcccctaactataaagtgtctcaatttggtcccataa 1273468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 649 - 732
Target Start/End: Complemental strand, 26393245 - 26393162
Alignment:
Q  649 ttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    ||||||||| |||| ||||||||||||||||||| | || | | |  |||| |||||||||||||| |||||||||||||||||    
T  26393245 ttaatacatgatttggtcccttaacttattttttatttttattttgatcctttaactataaagtgtctcaatttggtcccataa 26393162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 641 - 732
Target Start/End: Original strand, 38370272 - 38370363
Alignment:
Q  641 tttaaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    |||| ||||||||||||| ||| ||||||||||||||||||  | |||| | | ||| |||||| ||||||||| ||||||||||| |||||    
T  38370272 tttatggcttaatacatcgtttggtcccttaacttatttttcattttcaatttggtcatctaacgataaagtgtatcaatttggtctcataa 38370363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 646 - 728
Target Start/End: Complemental strand, 96802 - 96720
Alignment:
Q  646 ggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtccc 728  Q
    ||||||||||||  ||| ||||||||||||||||| ||| |||||| | |||| ||||||||||||||| | || ||||||||    
T  96802 ggcttaatacattgtttggtcccttaacttattttatgttttcactttggtcccctaactataaagtgtcttaaattggtccc 96720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 648 - 726
Target Start/End: Original strand, 10403277 - 10403354
Alignment:
Q  648 cttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtc 726  Q
    |||||||||||||||||||||| ||||||||||| || || ||| | |||| ||||||||||||||| | |||||||||    
T  10403277 cttaatacatcatttagtccct-aacttatttttggtttttactttggtcccctaactataaagtgtcttaatttggtc 10403354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 646 - 727
Target Start/End: Complemental strand, 27410802 - 27410722
Alignment:
Q  646 ggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcc 727  Q
    ||||||||||||||||| ||| ||||||||| |||| || |||| | || ||| ||||||||||||||| ||||||||||||    
T  27410802 ggcttaatacatcatttggtctcttaacttaattttagttttcaatttaatcc-ctaactataaagtgtctcaatttggtcc 27410722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 641 - 726
Target Start/End: Original strand, 30682710 - 30682795
Alignment:
Q  641 tttaaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtc 726  Q
    ||||| ||||||||||| |||| |||||||||||||||||| || |||| | | ||||  |||||||||||||| | |||||||||    
T  30682710 tttaaagcttaatacataatttggtcccttaacttatttttagttttcattttggtcccttaactataaagtgtcttaatttggtc 30682795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 644 - 728
Target Start/End: Complemental strand, 12396997 - 12396913
Alignment:
Q  644 aaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtccc 728  Q
    ||||||||||||||  ||| |||||||||||||||||  |  |||| | | |||| ||||||||||||||| |||||||||||||    
T  12396997 aaggcttaatacatgttttggtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtccc 12396913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 645 - 732
Target Start/End: Original strand, 29663637 - 29663723
Alignment:
Q  645 aggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    |||||||||||||| |||| |||||||| |||||||| || |||| | |  ||| ||||||||||| ||| |||||||||||||||||    
T  29663637 aggcttaatacatcctttaatcccttaatttatttttggttttcattttgatcc-ctaactataaattgtctcaatttggtcccataa 29663723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 644 - 707
Target Start/End: Complemental strand, 37642664 - 37642601
Alignment:
Q  644 aaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactat 707  Q
    |||||||||||||| |||| ||||||||||||||||| ||| |||| | |||||| ||||||||    
T  37642664 aaggcttaatacattatttggtcccttaacttattttctgttttcaatttagtcccctaactat 37642601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 664 - 751
Target Start/End: Complemental strand, 38555379 - 38555292
Alignment:
Q  664 gtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataatttttcctctgtttactaa 751  Q
    |||||||||||||||||| || || ||| | |||| ||||||||||||||| | ||||||||| || || | |||||| |||||||||    
T  38555379 gtcccttaacttatttttagtttttactttggtcccctaactataaagtgtattaatttggtcacagaagtcttcctccgtttactaa 38555292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 645 - 727
Target Start/End: Complemental strand, 44128456 - 44128374
Alignment:
Q  645 aggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcc 727  Q
    |||||||||||||| ||| |||| |||||||||||||  | |||| | | |||| ||||||||||||||| ||||||| ||||    
T  44128456 aggcttaatacatcgtttggtcctttaacttatttttcattttcaatttggtcccctaactataaagtgtctcaatttagtcc 44128374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 646 - 707
Target Start/End: Original strand, 54372741 - 54372802
Alignment:
Q  646 ggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactat 707  Q
    ||||||||||||||||| |||||||||||||||||  || |||| | | |||||||||||||    
T  54372741 ggcttaatacatcatttggtcccttaacttattttccgttttcaatttggtcctctaactat 54372802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 646 - 726
Target Start/End: Original strand, 15445431 - 15445511
Alignment:
Q  646 ggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtc 726  Q
    ||||||||||||  ||| |||||||||||||||||| |  |||| | | |||| |||| |||||||||| |||||||||||    
T  15445431 ggcttaatacatgctttggtcccttaacttatttttggatttcattttggtcccctaattataaagtgtctcaatttggtc 15445511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 640 - 728
Target Start/End: Original strand, 29833361 - 29833449
Alignment:
Q  640 atttaaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtccc 728  Q
    ||||||||||||||||||  ||| |||||||||||||||||  |  |||| | | |||| |||| |||||| ||| |||||||||||||    
T  29833361 atttaaggcttaatacatgctttggtcccttaacttattttcggatttcattttggtcccctaattataaaatgtctcaatttggtccc 29833449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 649 - 728
Target Start/End: Complemental strand, 28370759 - 28370680
Alignment:
Q  649 ttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtccc 728  Q
    |||||||||  ||| |||||||||||||||||| |  |||| | | ||||||||||| |||| ||| |||||||||||||    
T  28370759 ttaatacatgctttggtcccttaacttatttttggatttcaatttggtcctctaactttaaactgtctcaatttggtccc 28370680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 649 - 732
Target Start/End: Complemental strand, 30683145 - 30683062
Alignment:
Q  649 ttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    |||||||||  ||| ||||||||| ||||||||  | |||| | | ||||  |||||||||||||| |||||||||||||||||    
T  30683145 ttaatacatgctttggtcccttaatttatttttgattttcattttggtcccttaactataaagtgtctcaatttggtcccataa 30683062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 645 - 732
Target Start/End: Original strand, 53400179 - 53400266
Alignment:
Q  645 aggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    |||||||||||||  ||| | |||||||||||||||| |  |||| | | ||||  |||||||||||||| |||||||||||| ||||    
T  53400179 aggcttaatacatgctttggccccttaacttatttttagatttcattttggtcccataactataaagtgtctcaatttggtcctataa 53400266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 645 - 728
Target Start/End: Complemental strand, 53401573 - 53401490
Alignment:
Q  645 aggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtccc 728  Q
    |||||||||||||  ||| |||||||||||||||||| |  || | | ||||||  |||||||||| ||| |||||||||||||    
T  53401573 aggcttaatacatgctttggtcccttaacttatttttggattttattttagtcccataactataaactgtctcaatttggtccc 53401490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 693 - 732
Target Start/End: Original strand, 55952867 - 55952906
Alignment:
Q  693 tagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    |||||| ||||||||||||||||||||||||||| |||||    
T  55952867 tagtcccctaactataaagtgtttcaatttggtctcataa 55952906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 642 - 732
Target Start/End: Complemental strand, 3217734 - 3217644
Alignment:
Q  642 ttaaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    ||||||||||||||||  |||  |||||||||||||||||    |||||| | ||||| ||||| |||||||||| |||||| || |||||    
T  3217734 ttaaggcttaatacattctttgatcccttaacttatttttgaatttcactttggtcctttaactttaaagtgttttaatttgatctcataa 3217644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 645 - 691
Target Start/End: Complemental strand, 29688096 - 29688050
Alignment:
Q  645 aggcttaatacatcatttagtcccttaacttattttttgtattcact 691  Q
    ||||||||||||| |||| |||||||||||||||||| || ||||||    
T  29688096 aggcttaatacattatttggtcccttaacttatttttggttttcact 29688050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 650 - 728
Target Start/End: Original strand, 46794839 - 46794917
Alignment:
Q  650 taatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtccc 728  Q
    ||||||||  ||| |||||||||||||||||| |  |||| | | |||| |||||| |||| |||||||||||||||||    
T  46794839 taatacatactttggtcccttaacttatttttggatttcaatttggtcccctaactttaaactgtttcaatttggtccc 46794917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 645 - 738
Target Start/End: Original strand, 11094520 - 11094613
Alignment:
Q  645 aggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataatttttc 738  Q
    |||||||||||| ||| | |||| |||| |||||||| || || ||| | |||  ||||||||||||||| | |||||||||| |||| |||||    
T  11094520 aggcttaatacaccatctggtcctttaatttatttttggtttttactttggtctcctaactataaagtgtcttaatttggtcctataaattttc 11094613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 643 - 748
Target Start/End: Complemental strand, 15317951 - 15317847
Alignment:
Q  643 taaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataatttttcctct 742  Q
    |||||||||||||||  ||| |||||| ||||||| ||||| ||||| | | ||||  ||||| ||||  || |||||||||||| |||| ||| |||||    
T  15317951 taaggcttaatacatgctttggtccctcaacttat-ttttgaattcattttggtcccttaactttaaaccgtctcaatttggtccgataactttacctct 15317853  T
Q  743 gtttac 748  Q
    ||||||    
T  15317852 gtttac 15317847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 644 - 681
Target Start/End: Original strand, 30441602 - 30441639
Alignment:
Q  644 aaggcttaatacatcatttagtcccttaacttattttt 681  Q
    ||||||||||||||  ||||||||||||||||||||||    
T  30441602 aaggcttaatacatgttttagtcccttaacttattttt 30441639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 59; Significance: 1e-24; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 646 - 732
Target Start/End: Complemental strand, 8412437 - 8412351
Alignment:
Q  646 ggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    |||||||||||| |||| ||||||||||||||||||||| |||| | |||||| ||||||||||||||| |||||||||||||||||    
T  8412437 ggcttaatacattatttggtcccttaacttattttttgttttcaatttagtcccctaactataaagtgtctcaatttggtcccataa 8412351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 643 - 732
Target Start/End: Original strand, 5311271 - 5311360
Alignment:
Q  643 taaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    |||||||||||||||||||| |||||||||||||||||| || |||| | |||||| ||||||||||||||| |||||||||||| ||||    
T  5311271 taaggcttaatacatcatttggtcccttaacttatttttggttttcaatttagtcccctaactataaagtgtctcaatttggtcctataa 5311360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 643 - 732
Target Start/End: Original strand, 31738355 - 31738444
Alignment:
Q  643 taaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    |||||||||||||||| ||| |||||||||||||||||| || |||| | | |||| |||||||||||||||||||||||||||||||||    
T  31738355 taaggcttaatacatcctttggtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtttcaatttggtcccataa 31738444  T

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Target: chr6; HSP #4
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 648 - 726
Target Start/End: Original strand, 8411083 - 8411161
Alignment:
Q  648 cttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtc 726  Q
    |||||||||||||||||| ||||||||||||||| || |||| | |||||| ||||||||||||||| |||||||||||    
T  8411083 cttaatacatcatttagttccttaacttatttttggttttcaatttagtcccctaactataaagtgtctcaatttggtc 8411161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 647 - 732
Target Start/End: Complemental strand, 33802137 - 33802052
Alignment:
Q  647 gcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    |||||||||||||||| |||||||||||||||||| || |||||| | |||| ||||||||||||||| | |||||| ||||||||    
T  33802137 gcttaatacatcatttggtcccttaacttatttttggttttcactttggtcccctaactataaagtgtcttaatttgatcccataa 33802052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 645 - 732
Target Start/End: Original strand, 9927600 - 9927687
Alignment:
Q  645 aggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    |||||||||||| ||| | ||||||||||||||||||||| || | | | |||| ||||||||||||||| |||||||||||||||||    
T  9927600 aggcttaatacagcatctggtcccttaacttattttttgtttttagtttggtcccctaactataaagtgtctcaatttggtcccataa 9927687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 647 - 728
Target Start/End: Complemental strand, 18139607 - 18139526
Alignment:
Q  647 gcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtccc 728  Q
    |||||||||||||||| |||||||||||||||||  || |||||| |  ||||||||||||||||||| |||| ||||||||    
T  18139607 gcttaatacatcatttggtcccttaacttattttccgttttcactttgatcctctaactataaagtgtctcaaattggtccc 18139526  T

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Target: chr6; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 644 - 732
Target Start/End: Complemental strand, 22300026 - 22299938
Alignment:
Q  644 aaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    |||| |||||||||  |||  ||||||||||||||||| || |||||| | |||| ||||||||||||||| |||||||||||||||||    
T  22300026 aaggtttaatacatgctttgatcccttaacttatttttggttttcactttggtcccctaactataaagtgtctcaatttggtcccataa 22299938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 649 - 732
Target Start/End: Original strand, 27438788 - 27438871
Alignment:
Q  649 ttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    |||||||||||||| |||||||||||||||||| |  |||| | | ||||| |||||||||||||| |||||||| ||||||||    
T  27438788 ttaatacatcatttggtcccttaacttatttttggatttcattttggtcctttaactataaagtgtctcaatttgatcccataa 27438871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 645 - 732
Target Start/End: Complemental strand, 31740394 - 31740307
Alignment:
Q  645 aggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    |||||||||||||  ||| |||| |||||||||||||||| |||| | | ||||  |||||||||||||| |||||||||||||||||    
T  31740394 aggcttaatacatggtttggtcctttaacttattttttgttttcaatttggtcccttaactataaagtgtctcaatttggtcccataa 31740307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 646 - 748
Target Start/End: Complemental strand, 12203392 - 12203290
Alignment:
Q  646 ggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataatttttcctctgtt 745  Q
    ||||||||||||  ||||||||||||||||||||||    |||| | | ||||| ||||| |||| ||| ||||||||||||||||||||| |||| |||    
T  12203392 ggcttaatacatgctttagtcccttaacttatttttgaatttcattttggtcctttaactttaaactgtctcaatttggtcccataattttacctccgtt 12203293  T
Q  746 tac 748  Q
    |||    
T  12203292 tac 12203290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 645 - 738
Target Start/End: Original strand, 33807683 - 33807776
Alignment:
Q  645 aggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataatttttc 738  Q
    ||||||||||||| ||||  ||||||||||||||||| || |||||| | ||||  |||||||||||||| |||||||| | |||||| |||||    
T  33807683 aggcttaatacattatttgatcccttaacttatttttggttttcactttggtcccttaactataaagtgtctcaatttgatgccataaattttc 33807776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 646 - 732
Target Start/End: Complemental strand, 34084253 - 34084169
Alignment:
Q  646 ggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    ||||||||||||||||| |||||||||||||||| | || |||||| | |||  |||| |||||||||| ||||||||||| |||||    
T  34084253 ggcttaatacatcatttggtcccttaacttatttctggttttcactttggtc--ctaaatataaagtgtctcaatttggtctcataa 34084169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 640 - 748
Target Start/End: Complemental strand, 12202419 - 12202311
Alignment:
Q  640 atttaaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataatttttcc 739  Q
    ||||||||||||||||||  ||| |||||||||||||||||||   |||| | | ||||  ||||| ||||  || ||||||||||||||||| ||| ||    
T  12202419 atttaaggcttaatacatgctttggtcccttaacttattttttaatttcattttggtcccttaactttaaaccgtctcaatttggtcccataactttgcc 12202320  T
Q  740 tctgtttac 748  Q
    || ||||||    
T  12202319 tccgtttac 12202311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 646 - 726
Target Start/End: Complemental strand, 19368639 - 19368559
Alignment:
Q  646 ggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtc 726  Q
    ||||||||||||  ||| |||||||||||||||||  |  |||| | | |||||||||||||||||||| |||||||||||    
T  19368639 ggcttaatacatgctttggtcccttaacttattttcggatttcattttggtcctctaactataaagtgtctcaatttggtc 19368559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 645 - 728
Target Start/End: Original strand, 8447215 - 8447298
Alignment:
Q  645 aggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtccc 728  Q
    |||||||||| ||  |||||||||||||||||||||  |  |||| | | |||| ||||||||||||||| |||||||||||||    
T  8447215 aggcttaatatatgctttagtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtccc 8447298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 645 - 728
Target Start/End: Original strand, 8456019 - 8456102
Alignment:
Q  645 aggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtccc 728  Q
    |||||||||| ||  |||||||||||||||||||||  |  |||| | | |||| ||||||||||||||| |||||||||||||    
T  8456019 aggcttaatatatgctttagtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtccc 8456102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 702 - 768
Target Start/End: Complemental strand, 16269682 - 16269616
Alignment:
Q  702 aactataaagtgtttcaatttggtcccataatttttcctctgtttactaaaatggtcctctttgtta 768  Q
    |||||| |||||| ||||||||||| ||||| | ||||||||||||||||  ||||||||| |||||    
T  16269682 aactattaagtgtgtcaatttggtctcataagtcttcctctgtttactaatgtggtcctctctgtta 16269616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 645 - 682
Target Start/End: Original strand, 15435686 - 15435723
Alignment:
Q  645 aggcttaatacatcatttagtcccttaacttatttttt 682  Q
    |||||||||||||||||| |||||||||||||||||||    
T  15435686 aggcttaatacatcatttggtcccttaacttatttttt 15435723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 645 - 732
Target Start/End: Original strand, 22298598 - 22298685
Alignment:
Q  645 aggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    |||||||||||||  ||| |||| ||||||||||||| || |||| | | ||||||||| | |||||||| ||| |||| ||||||||    
T  22298598 aggcttaatacatgctttggtcctttaacttatttttggttttcattttggtcctctaattttaaagtgtctcagtttgatcccataa 22298685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 647 - 750
Target Start/End: Complemental strand, 27440295 - 27440192
Alignment:
Q  647 gcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataatttttcctctgttt 746  Q
    |||||||||||||||| ||||||||||||||||||    |||| | |  |||  ||||| |||| ||| ||||||||||||||||| | ||| || ||||    
T  27440295 gcttaatacatcatttggtcccttaacttatttttgaatttcattttgatcccttaactttaaattgtctcaatttggtcccataaatcttcttccgttt 27440196  T
Q  747 acta 750  Q
    ||||    
T  27440195 acta 27440192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 57; Significance: 2e-23; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 644 - 732
Target Start/End: Complemental strand, 12936225 - 12936137
Alignment:
Q  644 aaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    |||||||||||||||||||||||||||||||||||||| || |||| | | |||| ||||||||||||||| |||||||||||| ||||    
T  12936225 aaggcttaatacatcatttagtcccttaacttatttttggttttcattttggtcccctaactataaagtgtctcaatttggtccaataa 12936137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 648 - 739
Target Start/End: Complemental strand, 27894142 - 27894051
Alignment:
Q  648 cttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataatttttcc 739  Q
    ||||||||||| ||| ||| ||||||||||||||||| |||||| | |||| ||||||||||||||||||||||||||| ||||| ||||||    
T  27894142 cttaatacatcgtttggtcgcttaacttattttttgttttcactttggtcccctaactataaagtgtttcaatttggtctcataaattttcc 27894051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 646 - 732
Target Start/End: Original strand, 18677971 - 18678057
Alignment:
Q  646 ggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    ||||||||||||||||| |||||||||||||||||| || |||||| |  ||| ||||||||||||||| |||||||||||||||||    
T  18677971 ggcttaatacatcatttggtcccttaacttatttttggttttcactttgatcccctaactataaagtgtctcaatttggtcccataa 18678057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 644 - 732
Target Start/End: Complemental strand, 12950383 - 12950295
Alignment:
Q  644 aaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    |||||||||||||||||||||||||||||||||||| | || |||| | | |||| ||||||||||||||| |||||||||||| ||||    
T  12950383 aaggcttaatacatcatttagtcccttaacttatttatggttttcattttggtcccctaactataaagtgtctcaatttggtccaataa 12950295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 644 - 732
Target Start/End: Complemental strand, 19525411 - 19525323
Alignment:
Q  644 aaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    ||||||||||||||||||| |||||||||||||||||| || |||| | | |||| ||||||||||||||| || |||||||| |||||    
T  19525411 aaggcttaatacatcatttggtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtctccatttggtcacataa 19525323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 644 - 751
Target Start/End: Complemental strand, 224713 - 224606
Alignment:
Q  644 aaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataatttttcctctg 743  Q
    |||| |||||||||||| | ||||||||||||||||| ||| |||| | | |||| ||||||||||||||| ||||||||||| ||||| | |||||| |    
T  224713 aaggtttaatacatcatctggtcccttaacttattttatgttttcattttggtcccctaactataaagtgtctcaatttggtctcataagtcttcctccg 224614  T
Q  744 tttactaa 751  Q
     |||||||    
T  224613 attactaa 224606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 644 - 750
Target Start/End: Original strand, 5975749 - 5975855
Alignment:
Q  644 aaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataatttttcctctg 743  Q
    |||| |||||||||||||| |||| |||||||||||||| | || | | | |||| |||| |||||||||| ||||||||||| ||||| | ||||||||    
T  5975749 aaggtttaatacatcatttggtcctttaacttattttttattttaattttggtcccctaattataaagtgtctcaatttggtctcataagtcttcctctg 5975848  T
Q  744 tttacta 750  Q
    |||||||    
T  5975849 tttacta 5975855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 646 - 732
Target Start/End: Complemental strand, 19827261 - 19827175
Alignment:
Q  646 ggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    ||||||||||||||||||||| |||||||||||||| || |||| | | ||||  ||| |||||||||| |||||||||||||||||    
T  19827261 ggcttaatacatcatttagtctcttaacttatttttggttttcaatttggtcccataattataaagtgtctcaatttggtcccataa 19827175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 643 - 732
Target Start/End: Original strand, 1663179 - 1663268
Alignment:
Q  643 taaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    ||||||||||||||||||||||||||||||||||||||| |  |||||| |  |||  |||||||||||||| | |||||||||| ||||    
T  1663179 taaggcttaatacatcatttagtcccttaacttatttttggatttcactttgatccattaactataaagtgtcttaatttggtcctataa 1663268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 641 - 750
Target Start/End: Complemental strand, 5384472 - 5384363
Alignment:
Q  641 tttaaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataatttttcct 740  Q
    |||||||||||||||||||||| || |||||| ||||||||  | |||| | |  ||| ||||||||||||||| ||||||||||||||||| | ||| |    
T  5384472 tttaaggcttaatacatcatttggttccttaatttatttttgattttcaatttgatcccctaactataaagtgtctcaatttggtcccataaatcttcgt 5384373  T
Q  741 ctgtttacta 750  Q
    | ||||||||    
T  5384372 ccgtttacta 5384363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 649 - 760
Target Start/End: Original strand, 223223 - 223335
Alignment:
Q  649 ttaatacatcatttagtcccttaacttattttttgtattc-actatagtcctctaactataaagtgtttcaatttggtcccataatttttcctctgttta 747  Q
    |||||| ||| ||| |||||||||||||||||| || ||| ||| | |||| ||||||||||||||| | ||||||||||||||| | |||||| |||||    
T  223223 ttaatatatcgttttgtcccttaacttatttttagttttccactttggtcccctaactataaagtgtattaatttggtcccataagtcttcctccgttta 223322  T
Q  748 ctaaaatggtcct 760  Q
    ||||  |||||||    
T  223323 ctaatgtggtcct 223335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 648 - 732
Target Start/End: Original strand, 1273086 - 1273170
Alignment:
Q  648 cttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    ||||||||||||||| ||||||||| |||||||| || |||| | | ||||| |||||||||| ||| |||||||||||||||||    
T  1273086 cttaatacatcatttggtcccttaatttatttttggttttcattttggtcctttaactataaaatgtctcaatttggtcccataa 1273170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 645 - 732
Target Start/End: Original strand, 5382936 - 5383023
Alignment:
Q  645 aggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    |||||||||||||||||| |||||||||||||||||| || |||  | | |||  |||| |||||||||| |||||||||||||||||    
T  5382936 aggcttaatacatcatttggtcccttaacttatttttggttttctatttggtctcctaattataaagtgtctcaatttggtcccataa 5383023  T

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Target: chr5; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 644 - 762
Target Start/End: Complemental strand, 21389264 - 21389148
Alignment:
Q  644 aaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataatttttcctctg 743  Q
    ||||||||||||||  ||| |||||||||||||||||| || |||| | |  |||  ||||||||  |||| ||||||||||||||||| | |||||| |    
T  21389264 aaggcttaatacatgctttggtcccttaacttatttttggttttcatttttttcccttaactata--gtgtctcaatttggtcccataagtcttcctccg 21389167  T
Q  744 tttactaaaatggtcctct 762  Q
    |||||||| ||||||||||    
T  21389166 tttactaatatggtcctct 21389148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 645 - 719
Target Start/End: Original strand, 6629725 - 6629799
Alignment:
Q  645 aggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaa 719  Q
    |||||||||||||||||| |||||||||||||||| | || |||||| | |||| ||||||||||||||| ||||    
T  6629725 aggcttaatacatcatttggtcccttaacttatttgtggttttcactttggtcccctaactataaagtgtctcaa 6629799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 644 - 734
Target Start/End: Original strand, 42979441 - 42979531
Alignment:
Q  644 aaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataatt 734  Q
    |||||||||||||| ||||  |||||||  |||||||| |  |||| | | ||||||||||||||||||||||||||||||||| ||||||    
T  42979441 aaggcttaatacataatttgatcccttagtttatttttggatttcattttggtcctctaactataaagtgtttcaatttggtccaataatt 42979531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 632 - 709
Target Start/End: Complemental strand, 328289 - 328212
Alignment:
Q  632 aatatttgatttaaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataa 709  Q
    ||||||| |||||||||||||||||||||||  || ||||||||||||||||| |||| | | |||| ||||||||||    
T  328289 aatatttaatttaaggcttaatacatcatttgatcacttaacttattttttgttttcaatttggtcccctaactataa 328212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 649 - 758
Target Start/End: Complemental strand, 18695765 - 18695656
Alignment:
Q  649 ttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataatttttcctctgtttac 748  Q
    |||||||||  ||| ||||||||| |||||||| || |||| | || |||  |||||||||||||| ||||||||||||||||| | ||| || ||||||    
T  18695765 ttaatacatgctttggtcccttaatttatttttggttttcattttattcccttaactataaagtgtctcaatttggtcccataagtcttcatccgtttac 18695666  T
Q  749 taaaatggtc 758  Q
    ||| ||||||    
T  18695665 taatatggtc 18695656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 644 - 732
Target Start/End: Complemental strand, 10085968 - 10085880
Alignment:
Q  644 aaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    |||| |||||||||||||| ||||||||||||||||||    |||||| | |||   ||||| ||||||||||||||||||||||||||    
T  10085968 aaggtttaatacatcatttggtcccttaacttatttttgaatttcactttggtctcttaactttaaagtgtttcaatttggtcccataa 10085880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 648 - 732
Target Start/End: Original strand, 12933748 - 12933832
Alignment:
Q  648 cttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    ||||||| |||||||||||||||||||||||||| || |||| | |  ||| ||||||||||||||| |||||||| || |||||    
T  12933748 cttaatatatcatttagtcccttaacttatttttggttttcattttgatcccctaactataaagtgtctcaatttgatctcataa 12933832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 646 - 726
Target Start/End: Original strand, 19523978 - 19524058
Alignment:
Q  646 ggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtc 726  Q
    ||||||||| ||||||| |||||||||||||||||| || |||| | | ||||  |||||||||||||| |||||||||||    
T  19523978 ggcttaatatatcatttggtcccttaacttatttttggttttcaatttggtcccttaactataaagtgtctcaatttggtc 19524058  T

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Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 649 - 732
Target Start/End: Complemental strand, 22812505 - 22812422
Alignment:
Q  649 ttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    |||||||||||||| ||||||||||||||||||| | |||| | ||||||  |||||||||| ||| ||| |||| ||||||||    
T  22812505 ttaatacatcatttggtcccttaacttattttttattttcattttagtcccttaactataaaatgtctcactttgatcccataa 22812422  T

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Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 644 - 707
Target Start/End: Original strand, 30912307 - 30912370
Alignment:
Q  644 aaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactat 707  Q
    ||||||||||||||||||| || |||||||||||||| ||| |||| | |||||||||||||||    
T  30912307 aaggcttaatacatcatttggttccttaacttattttctgttttcaatttagtcctctaactat 30912370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 646 - 732
Target Start/End: Complemental strand, 7345511 - 7345425
Alignment:
Q  646 ggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    ||||||||||||  |||  |||||||||||||||||    |||| | | |||||||||||||||||||| |||||||||||||||||    
T  7345511 ggcttaatacatgttttgatcccttaacttatttttgaatttcattttggtcctctaactataaagtgtctcaatttggtcccataa 7345425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 648 - 750
Target Start/End: Original strand, 15613502 - 15613604
Alignment:
Q  648 cttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataatttttcctctgttta 747  Q
    ||||||||||  |||  ||||||||||||||||| |  |||| | | ||| |||||||||||||||| ||||||||||||||||| | ||| || |||||    
T  15613502 cttaatacatgctttgatcccttaacttatttttggatttcattttggtcttctaactataaagtgtctcaatttggtcccataaatcttcttccgttta 15613601  T
Q  748 cta 750  Q
    |||    
T  15613602 cta 15613604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 643 - 737
Target Start/End: Original strand, 26403299 - 26403393
Alignment:
Q  643 taaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataattttt 737  Q
    |||||||||||||||||| |||||| |||||||||||||  | |||| | | ||||  |||||||||||||| |||||||| || ||||| ||||    
T  26403299 taaggcttaatacatcatatagtcctttaacttatttttgattttcaatttggtcccttaactataaagtgtctcaatttgatctcataaatttt 26403393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 645 - 707
Target Start/End: Complemental strand, 30916240 - 30916178
Alignment:
Q  645 aggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactat 707  Q
    |||||||||||||||||| ||||||||||||||||| ||| |||| | |||||| ||||||||    
T  30916240 aggcttaatacatcatttggtcccttaacttattttatgttttcaatttagtcccctaactat 30916178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 644 - 710
Target Start/End: Original strand, 41905168 - 41905234
Alignment:
Q  644 aaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaa 710  Q
    ||||||||||||||||||| |||||||||||||||||| || |||| | | |||| |||||||||||    
T  41905168 aaggcttaatacatcatttggtcccttaacttatttttggttttcattttggtcccctaactataaa 41905234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 644 - 728
Target Start/End: Complemental strand, 4568097 - 4568013
Alignment:
Q  644 aaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtccc 728  Q
    ||||||||||||||  ||| |||||||||||||||||  |  |||| | | |||| ||||||||||||||| |||||||||||||    
T  4568097 aaggcttaatacatgctttggtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtccc 4568013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 648 - 732
Target Start/End: Original strand, 12947909 - 12947993
Alignment:
Q  648 cttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    ||||||| ||||||||||||||||||||||||||  | |||| | |  ||| ||||||||||||||| |||||||| || |||||    
T  12947909 cttaatatatcatttagtcccttaacttatttttgattttcattttgatcccctaactataaagtgtctcaatttgatctcataa 12947993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 648 - 760
Target Start/End: Complemental strand, 5977194 - 5977080
Alignment:
Q  648 cttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaa--gtgtttcaatttggtcccataatttttcctctgtt 745  Q
    |||||||||| |||| ||||||||| ||||||||||| || | |   |||| |||||||||||  |||| ||||||||||||||||| | ||| || |||    
T  5977194 cttaatacattatttggtcccttaatttattttttgttttaatttgggtcccctaactataaagtgtgtctcaatttggtcccataagtattcatccgtt 5977095  T
Q  746 tactaaaatggtcct 760  Q
    ||||||  |||||||    
T  5977094 tactaatgtggtcct 5977080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 643 - 768
Target Start/End: Complemental strand, 15615084 - 15614959
Alignment:
Q  643 taaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataatttttcctct 742  Q
    |||||||||||| |   ||| |||||||| ||||||||| |  |||| | | |||| ||||||||||||||| |||||||||| |||||| |||||  |     
T  15615084 taaggcttaatataggttttggtcccttatcttatttttggatttcattttggtccgctaactataaagtgtctcaatttggttccataaattttctgcc 15614985  T
Q  743 gtttactaaaatggtcctctttgtta 768  Q
    ||||||||   ||||||||| |||||    
T  15614984 gtttactattttggtcctctctgtta 15614959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 644 - 724
Target Start/End: Complemental strand, 1273463 - 1273383
Alignment:
Q  644 aaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttgg 724  Q
    ||||||||||| ||| ||| |||||||||||||||||| || |||| | | ||||  ||| |||||||||| |||||||||    
T  1273463 aaggcttaatatatcgtttggtcccttaacttatttttggttttcattttggtcccttaattataaagtgtctcaatttgg 1273383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 643 - 762
Target Start/End: Complemental strand, 8188322 - 8188205
Alignment:
Q  643 taaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataatttttcctct 742  Q
    |||||||| ||||||  ||| ||||||||||||||||| | | |||| | |  |||| ||||||| |||||| |||||||||||| |||| | ||||||     
T  8188322 taaggcttgatacat--tttggtcccttaacttattttattttttcagtttgatcctttaactattaagtgtgtcaatttggtcctataagtcttcctcc 8188225  T
Q  743 gtttactaaaatggtcctct 762  Q
     ||||||||  |||||||||    
T  8188224 atttactaacgtggtcctct 8188205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 645 - 681
Target Start/End: Original strand, 19825868 - 19825904
Alignment:
Q  645 aggcttaatacatcatttagtcccttaacttattttt 681  Q
    |||||||||||||||||| ||||||||||||||||||    
T  19825868 aggcttaatacatcatttggtcccttaacttattttt 19825904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 645 - 728
Target Start/End: Original strand, 5061022 - 5061105
Alignment:
Q  645 aggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtccc 728  Q
    |||||||||||||  ||| |||||||||||||||||| |  |||| | | |||| ||||  ||||||||| |||||||||||||    
T  5061022 aggcttaatacatgctttggtcccttaacttatttttggatttcattttggtcccctaatgataaagtgtctcaatttggtccc 5061105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 645 - 732
Target Start/End: Original strand, 21387631 - 21387718
Alignment:
Q  645 aggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    ||||||||||||   ||| ||||||||||||||||||    |||| | | |||| ||||||||||| ||| |||||||||||||||||    
T  21387631 aggcttaatacaagctttggtcccttaacttatttttgaatttcattttggtcccctaactataaaatgtctcaatttggtcccataa 21387718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 644 - 707
Target Start/End: Complemental strand, 33362690 - 33362627
Alignment:
Q  644 aaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactat 707  Q
    |||| |||||| ||||||| ||||||||||||||||||||| || | | | |||||||||||||    
T  33362690 aaggtttaatatatcatttggtcccttaacttattttttgtttttaatttggtcctctaactat 33362627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 646 - 728
Target Start/End: Original strand, 19050744 - 19050826
Alignment:
Q  646 ggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtccc 728  Q
    ||||||||||||  ||| |||||||||||||||||| |  |||| | | |||| |||||| |||| ||| |||||||||||||    
T  19050744 ggcttaatacatgttttggtcccttaacttatttttggatttcaatttggtcccctaactttaaactgtctcaatttggtccc 19050826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 647 - 732
Target Start/End: Complemental strand, 40059448 - 40059363
Alignment:
Q  647 gcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    |||||||| || |||| |||||||||||||||||| || |||| | |  ||| |||||||| |||||||| || ||||||| ||||    
T  40059448 gcttaatatataatttggtcccttaacttatttttggttttcattttgatcccctaactattaagtgttttaaattggtccaataa 40059363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 57; Significance: 2e-23; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 644 - 732
Target Start/End: Original strand, 7036959 - 7037047
Alignment:
Q  644 aaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    ||||||||||||||||||| |||| ||||||||||||| |  |||||| ||||||  ||||||||||||||||||||||||||||||||    
T  7036959 aaggcttaatacatcatttggtcctttaacttatttttggatttcactttagtcccttaactataaagtgtttcaatttggtcccataa 7037047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 648 - 748
Target Start/End: Original strand, 35799509 - 35799609
Alignment:
Q  648 cttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataatttttcctctgttta 747  Q
    |||||||||||||||  ||||||||||||||||| || |||| | |||||| ||||||||||||||| ||||||||||| ||||| ||||| || |||||    
T  35799509 cttaatacatcatttcatcccttaacttatttttggttttcaatttagtcccctaactataaagtgtctcaatttggtctcataacttttcttccgttta 35799608  T
Q  748 c 748  Q
    |    
T  35799609 c 35799609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 648 - 737
Target Start/End: Complemental strand, 41796071 - 41795982
Alignment:
Q  648 cttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataattttt 737  Q
    ||||||||||||||||||||||||||||||||||  | |||| | |  ||| ||||||||||||||| ||||||||||||||| ||||||    
T  41796071 cttaatacatcatttagtcccttaacttatttttgattttcattttgatcccctaactataaagtgtctcaatttggtcccatcattttt 41795982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 645 - 750
Target Start/End: Original strand, 42027187 - 42027292
Alignment:
Q  645 aggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataatttttcctctgt 744  Q
    |||||||||||||| ||| ||||||||||||||||||  | |||| | | |||||||||||| ||| ||| ||||||||||||||||| |||||  ||||    
T  42027187 aggcttaatacatcgtttggtcccttaacttatttttgattttcattttggtcctctaactacaaaatgtctcaatttggtcccataaattttctgctgt 42027286  T
Q  745 ttacta 750  Q
    ||||||    
T  42027287 ttacta 42027292  T

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Target: chr2; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 646 - 738
Target Start/End: Original strand, 37867751 - 37867843
Alignment:
Q  646 ggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataatttttc 738  Q
    ||||||||||||||||| |||||||||||||||||| || |||| | |  ||| ||||||||||||||| |||||||||||||| || |||||    
T  37867751 ggcttaatacatcatttggtcccttaacttatttttggttttcaatttgatcccctaactataaagtgtctcaatttggtcccacaaattttc 37867843  T

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Target: chr2; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 646 - 734
Target Start/End: Complemental strand, 42029079 - 42028991
Alignment:
Q  646 ggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataatt 734  Q
    ||||||||||||||||| |||||||||| ||||||| || |||| | | ||| |||||||||||||||| || ||||||||||||||||    
T  42029079 ggcttaatacatcatttggtcccttaacgtatttttggttttcattttggtcatctaactataaagtgtctcgatttggtcccataatt 42028991  T

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Target: chr2; HSP #7
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 645 - 732
Target Start/End: Complemental strand, 7038454 - 7038367
Alignment:
Q  645 aggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    |||||||||||||||||| |||||||||||||||||| |  |||| | | ||||  |||||||||||||| |||||||||||||||||    
T  7038454 aggcttaatacatcatttggtcccttaacttatttttggatttcattttggtcccttaactataaagtgtctcaatttggtcccataa 7038367  T

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Target: chr2; HSP #8
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 647 - 732
Target Start/End: Complemental strand, 23179002 - 23178917
Alignment:
Q  647 gcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    ||||||| |||||||| |||||||||||||||||| || |||||| | |||| ||||||||||| ||||| || ||||||||||||    
T  23179002 gcttaatccatcatttggtcccttaacttatttttagttttcactttggtcccctaactataaactgttttaaattggtcccataa 23178917  T

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Target: chr2; HSP #9
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 647 - 732
Target Start/End: Complemental strand, 23590259 - 23590174
Alignment:
Q  647 gcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    ||||||| |||||||| |||||||||||||||||| || |||||| | |||| ||||||||||| ||||| || ||||||||||||    
T  23590259 gcttaatccatcatttggtcccttaacttatttttagttttcactttggtcccctaactataaactgttttaaattggtcccataa 23590174  T

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Target: chr2; HSP #10
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 643 - 728
Target Start/End: Complemental strand, 29424736 - 29424651
Alignment:
Q  643 taaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtccc 728  Q
    |||||||||||||||  ||| |||||||||||||||||| || || ||  | |||| |||||||||||||||||||||||||||||    
T  29424736 taaggcttaatacattgtttggtcccttaacttatttttggtttttacattggtcccctaactataaagtgtttcaatttggtccc 29424651  T

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Target: chr2; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 646 - 732
Target Start/End: Original strand, 23177668 - 23177755
Alignment:
Q  646 ggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctc-taactataaagtgtttcaatttggtcccataa 732  Q
    ||||||||||||||||| ||||||||| |||||||| || |||| | | |||| | |||||||||||||| |||||||||||||||||    
T  23177668 ggcttaatacatcatttggtcccttaatttatttttggttttcattttggtccccctaactataaagtgtctcaatttggtcccataa 23177755  T

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Target: chr2; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 646 - 732
Target Start/End: Original strand, 23588925 - 23589012
Alignment:
Q  646 ggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctc-taactataaagtgtttcaatttggtcccataa 732  Q
    ||||||||||||||||| ||||||||| |||||||| || |||| | | |||| | |||||||||||||| |||||||||||||||||    
T  23588925 ggcttaatacatcatttggtcccttaatttatttttggttttcattttggtccccctaactataaagtgtctcaatttggtcccataa 23589012  T

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Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 645 - 750
Target Start/End: Original strand, 6706920 - 6707025
Alignment:
Q  645 aggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataatttttcctctgt 744  Q
    |||||||||||||  ||| |||||||||||||||||| |  |||| | | |||| ||||||||||||||| |||||||||| |||||| | ||| || ||    
T  6706920 aggcttaatacatgctttggtcccttaacttatttttggatttcattttggtcccctaactataaagtgtctcaatttggttccataaatcttcttccgt 6707019  T
Q  745 ttacta 750  Q
    ||||||    
T  6707020 ttacta 6707025  T

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Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 644 - 768
Target Start/End: Complemental strand, 2583669 - 2583545
Alignment:
Q  644 aaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataatttttcctctg 743  Q
    ||||||||||||||| ||| ||||  |||||||||||| || || | | | |||| ||||||||||||||| ||||||||||| ||||| | || | |||    
T  2583669 aaggcttaatacatcgtttggtcctctaacttatttttggtttttaattttgtcccctaactataaagtgtctcaatttggtctcataaatcttacactg 2583570  T
Q  744 tttactaaaatggtcctctttgtta 768  Q
    |||||||   ||||||||| |||||    
T  2583569 tttactatcttggtcctctctgtta 2583545  T

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Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 645 - 728
Target Start/End: Original strand, 3665218 - 3665301
Alignment:
Q  645 aggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtccc 728  Q
    |||||||||||||  ||| |||||||||||||||||  |  |||| | | |||||||||||||||| |||||||||||||||||    
T  3665218 aggcttaatacatgctttggtcccttaacttattttcggatttcattttggtcctctaactataaaatgtttcaatttggtccc 3665301  T

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Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 645 - 732
Target Start/End: Original strand, 4829459 - 4829546
Alignment:
Q  645 aggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    ||||||||||||||||||  | ||||||||||||||| || |||||| ||||||  |||||||||| ||| |||||||| || |||||    
T  4829459 aggcttaatacatcatttgattccttaacttatttttcgttttcactttagtcccttaactataaaatgtctcaatttgatctcataa 4829546  T

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Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 646 - 732
Target Start/End: Original strand, 2581798 - 2581884
Alignment:
Q  646 ggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    |||| |||||||||||| ||||  |||||||||||| || |||| | |  ||| ||||||||||||||| |||||||||||||||||    
T  2581798 ggctaaatacatcatttggtcctctaacttatttttggttttcaatttgatcccctaactataaagtgtctcaatttggtcccataa 2581884  T

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Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 649 - 747
Target Start/End: Complemental strand, 10368503 - 10368405
Alignment:
Q  649 ttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataatttttcctctgttta 747  Q
    |||||||||||||| ||||||||| ||||||||  | |||| | |  ||| ||||||||||||||| |||||||| |||||||| ||||| || |||||    
T  10368503 ttaatacatcatttggtcccttaatttatttttgattttcaatttgatcccctaactataaagtgtctcaatttgatcccataaattttcttccgttta 10368405  T

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Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 644 - 722
Target Start/End: Complemental strand, 11575578 - 11575500
Alignment:
Q  644 aaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaattt 722  Q
    ||||||||||||||||||| |||| ||||||||||||| || || | | | |||| ||||||||||| |||||||||||    
T  11575578 aaggcttaatacatcatttggtccattaacttatttttggttttaattttggtcccctaactataaaatgtttcaattt 11575500  T

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Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 646 - 732
Target Start/End: Original strand, 12852881 - 12852967
Alignment:
Q  646 ggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    ||||||||||||  ||| ||||||||||||| |||| |  |||| | | |||| ||||||||||||||| |||||||||||||||||    
T  12852881 ggcttaatacatgctttggtcccttaacttacttttggatttcattttggtcccctaactataaagtgtctcaatttggtcccataa 12852967  T

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Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 646 - 732
Target Start/End: Complemental strand, 12854225 - 12854139
Alignment:
Q  646 ggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    ||||||||||||  ||| |||||||||||||||||| |  |||| | | ||||  |||||||||||||| |||||||||||||||||    
T  12854225 ggcttaatacatgctttggtcccttaacttatttttagatttcattttggtcccttaactataaagtgtctcaatttggtcccataa 12854139  T

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Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 644 - 748
Target Start/End: Original strand, 43015532 - 43015636
Alignment:
Q  644 aaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataatttttcctctg 743  Q
    ||||||||||||||  ||| ||||||||||||||||||    |||| | | ||||  ||||| |||| ||| ||||||||||||||||| ||| ||||||    
T  43015532 aaggcttaatacatgctttggtcccttaacttatttttgaatttcattttggtcccttaactttaaactgtctcaatttggtcccataactttacctctg 43015631  T
Q  744 tttac 748  Q
    |||||    
T  43015632 tttac 43015636  T

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Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 643 - 738
Target Start/End: Original strand, 12958409 - 12958503
Alignment:
Q  643 taaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataatttttc 738  Q
    |||||||||||| ||||||| || | ||||||||||||| || || | | |  ||| ||||||||||||||| ||||||||||||||||| |||||    
T  12958409 taaggcttaatatatcatttggttc-ttaacttatttttggtttttaatttgatcccctaactataaagtgtctcaatttggtcccataaattttc 12958503  T

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Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 636 - 719
Target Start/End: Complemental strand, 21010625 - 21010542
Alignment:
Q  636 tttgatttaaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaa 719  Q
    |||| ||| |||||||||| |||||||  |||||||||||||||||||| || | | |||||  ||||||||||||||| ||||    
T  21010625 tttggttttaggcttaatatatcatttgatcccttaacttattttttgtttttattttagtctcctaactataaagtgtctcaa 21010542  T

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Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 645 - 732
Target Start/End: Original strand, 42246585 - 42246672
Alignment:
Q  645 aggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    |||||||||||||  ||| |||||||||||| ||||| || |||| | |  ||| |||| ||||||||||||||||||| ||||||||    
T  42246585 aggcttaatacatgctttggtcccttaacttgtttttggttttcattttgatcccctaattataaagtgtttcaatttgatcccataa 42246672  T

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Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 646 - 748
Target Start/End: Original strand, 15808075 - 15808177
Alignment:
Q  646 ggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataatttttcctctgtt 745  Q
    |||||||| |||  ||| ||||||||||||||||||    |||| | ||||||  ||||| |||| | | ||||||||||||||||||||| ||||||||    
T  15808075 ggcttaattcatgttttggtcccttaacttatttttgaatttcattttagtcccttaactttaaactatctcaatttggtcccataattttacctctgtt 15808174  T
Q  746 tac 748  Q
    |||    
T  15808175 tac 15808177  T

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Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 646 - 732
Target Start/End: Complemental strand, 42368428 - 42368343
Alignment:
Q  646 ggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    |||||||||||| |||| |||| ||||||||||||| |  |||| | | |||| ||||||||||||||| || ||||||||||||||    
T  42368428 ggcttaatacatgatttggtcc-ttaacttatttttggatttcattttggtcccctaactataaagtgtctcgatttggtcccataa 42368343  T

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Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 645 - 750
Target Start/End: Complemental strand, 25570992 - 25570887
Alignment:
Q  645 aggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataatttttcctctgt 744  Q
    |||||||||||||| ||  ||||||||||||||||| | |  ||| | ||||||  ||||||| ||||||||||||||| | |||||| | ||||||  |    
T  25570992 aggcttaatacatccttcggtcccttaacttattttattttctcagtgtagtcccttaactattaagtgtttcaatttgattccataagtcttcctccat 25570893  T
Q  745 ttacta 750  Q
    ||||||    
T  25570892 ttacta 25570887  T

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Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 647 - 726
Target Start/End: Complemental strand, 3255997 - 3255919
Alignment:
Q  647 gcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtc 726  Q
    |||||||||||  ||| |||||||||||||||||  |  |||| | | |||| |||||||||||||||||||||||||||    
T  3255997 gcttaatacatgcttt-gtcccttaacttattttcggatttcattttggtcccctaactataaagtgtttcaatttggtc 3255919  T

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Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 673 - 728
Target Start/End: Complemental strand, 21012174 - 21012119
Alignment:
Q  673 cttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtccc 728  Q
    |||||||||||| |||| | |  ||| |||||||||||||||||||||||||||||    
T  21012174 cttattttttgttttcattttgatcccctaactataaagtgtttcaatttggtccc 21012119  T

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Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 645 - 732
Target Start/End: Original strand, 32614379 - 32614466
Alignment:
Q  645 aggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    |||||||||| ||||||| |||||||| |||||||| | | |||| | | |||| |||||||| | |||||||||||| || ||||||    
T  32614379 aggcttaatatatcatttggtcccttagcttattttattttttcattttggtcccctaactatcacgtgtttcaatttagttccataa 32614466  T

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Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 648 - 738
Target Start/End: Complemental strand, 28109988 - 28109898
Alignment:
Q  648 cttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataatttttc 738  Q
    ||||||| || |||| |||||||||||||||||| || |||| | | |||   |||| ||||||| | ||||||||||||||||| |||||    
T  28109988 cttaatatatgatttggtcccttaacttatttttcgttttcaatttggtctcataacgataaagtatctcaatttggtcccataacttttc 28109898  T

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Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 646 - 680
Target Start/End: Original strand, 42596555 - 42596589
Alignment:
Q  646 ggcttaatacatcatttagtcccttaacttatttt 680  Q
    ||||||||||||||||| |||||||||||||||||    
T  42596555 ggcttaatacatcatttggtcccttaacttatttt 42596589  T

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Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 647 - 728
Target Start/End: Original strand, 2305536 - 2305617
Alignment:
Q  647 gcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtccc 728  Q
    |||||||||||  |||  ||||||||||||||||| |  |||| | |  ||| ||||||||||||||| |||||||||||||    
T  2305536 gcttaatacatgctttgatcccttaacttatttttggatttcattttgatcccctaactataaagtgtctcaatttggtccc 2305617  T

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Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 669 - 734
Target Start/End: Complemental strand, 6209162 - 6209097
Alignment:
Q  669 ttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataatt 734  Q
    ||||||||||||| |  |||| | | ||| |||||||||||||||| | |||||||||||||||||    
T  6209162 ttaacttatttttggatttcattttggtcatctaactataaagtgtcttaatttggtcccataatt 6209097  T

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Target: scaffold1974 (Bit Score: 56; Significance: 8e-23; HSPs: 1)
Name: scaffold1974
Description:

Target: scaffold1974; HSP #1
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 645 - 732
Target Start/End: Complemental strand, 750 - 663
Alignment:
Q  645 aggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    |||||||||||||||||| |||||||||||||||||||||  ||||| | |||| ||||||||||||||| ||||||| |||||||||    
T  750 aggcttaatacatcatttggtcccttaacttattttttgttatcactttggtcccctaactataaagtgtctcaatttagtcccataa 663  T

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Target: scaffold1878 (Bit Score: 56; Significance: 8e-23; HSPs: 1)
Name: scaffold1878
Description:

Target: scaffold1878; HSP #1
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 645 - 732
Target Start/End: Original strand, 524 - 611
Alignment:
Q  645 aggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    |||||||||||||||||| |||||||||||||||||||||  ||||| | |||| ||||||||||||||| ||||||| |||||||||    
T  524 aggcttaatacatcatttggtcccttaacttattttttgttatcactttggtcccctaactataaagtgtctcaatttagtcccataa 611  T

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Target: scaffold0290 (Bit Score: 56; Significance: 8e-23; HSPs: 2)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 645 - 732
Target Start/End: Complemental strand, 9600 - 9513
Alignment:
Q  645 aggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    |||||||||||||||||| |||||||||||||||||||||  ||||| | |||| ||||||||||||||| ||||||| |||||||||    
T  9600 aggcttaatacatcatttggtcccttaacttattttttgttatcactttggtcccctaactataaagtgtctcaatttagtcccataa 9513  T

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Target: scaffold0290; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 644 - 732
Target Start/End: Original strand, 8372 - 8460
Alignment:
Q  644 aaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    |||||||||| |||||||| |||||||||||||||||| || |||||| |  ||| ||||||||||| ||| |||| ||||||||||||    
T  8372 aaggcttaatccatcatttggtcccttaacttatttttggttttcactttgctcccctaactataaactgtctcaaattggtcccataa 8460  T

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Target: chr3 (Bit Score: 55; Significance: 3e-22; HSPs: 57)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 645 - 751
Target Start/End: Complemental strand, 53809615 - 53809509
Alignment:
Q  645 aggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataatttttcctctgt 744  Q
    |||||||||||||||||||||||||||||||||||||||| |||| | | |||| |||||| ||||  || ||||||| ||| ||||| |||||||| ||    
T  53809615 aggcttaatacatcatttagtcccttaacttattttttgttttcattttggtcccctaactttaaaacgtctcaattttgtctcataagttttcctccgt 53809516  T
Q  745 ttactaa 751  Q
    |||||||    
T  53809515 ttactaa 53809509  T

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Target: chr3; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 642 - 727
Target Start/End: Original strand, 54752607 - 54752692
Alignment:
Q  642 ttaaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcc 727  Q
    ||||||||||||||||||||| ||||||||||||||||||  | |||| | |||||| ||||||||||||||| ||||||||||||    
T  54752607 ttaaggcttaatacatcatttggtcccttaacttatttttcattttcaatttagtcccctaactataaagtgtctcaatttggtcc 54752692  T

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Target: chr3; HSP #3
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 644 - 732
Target Start/End: Complemental strand, 41387556 - 41387468
Alignment:
Q  644 aaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    ||||||||||||||||||| |||||||||||||||||| || |||| | | |||| ||||||||||| ||| |||||||||||||||||    
T  41387556 aaggcttaatacatcatttggtcccttaacttatttttggttttcaatttggtcccctaactataaaatgtctcaatttggtcccataa 41387468  T

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Target: chr3; HSP #4
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 644 - 732
Target Start/End: Complemental strand, 51825744 - 51825656
Alignment:
Q  644 aaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    ||||||||||| ||||||| |||||||||||||||||| |  |||||| | ||||  ||||||||||||||||||||||||||||||||    
T  51825744 aaggcttaatatatcatttggtcccttaacttatttttggatttcactttggtcccttaactataaagtgtttcaatttggtcccataa 51825656  T

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Target: chr3; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 646 - 737
Target Start/End: Complemental strand, 10987774 - 10987683
Alignment:
Q  646 ggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataattttt 737  Q
    |||||||||||||||||  ||||||||||||||||| || |||| | | |||| ||||||||||||||| ||||||||||||||||| ||||    
T  10987774 ggcttaatacatcatttgatcccttaacttatttttggttttcattttggtcccctaactataaagtgtctcaatttggtcccataaatttt 10987683  T

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Target: chr3; HSP #6
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 646 - 748
Target Start/End: Complemental strand, 26799027 - 26798925
Alignment:
Q  646 ggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataatttttcctctgtt 745  Q
    ||||||||||||||||| ||| |||||||||||||| || || | | | |||| ||||||||||| ||| ||||||||||||||||||| |||||| |||    
T  26799027 ggcttaatacatcatttggtctcttaacttatttttggtttttattttggtcccctaactataaaatgtctcaatttggtcccataattcttcctccgtt 26798928  T
Q  746 tac 748  Q
    |||    
T  26798927 tac 26798925  T

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Target: chr3; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 643 - 732
Target Start/End: Complemental strand, 8372740 - 8372651
Alignment:
Q  643 taaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    |||||||||||| ||| ||| |||||||||||||||||| || |||| | | |||| ||||||||||||||| |||||||||||||||||    
T  8372740 taaggcttaatatatcgtttggtcccttaacttatttttggttttcattttggtcccctaactataaagtgtctcaatttggtcccataa 8372651  T

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Target: chr3; HSP #8
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 653 - 734
Target Start/End: Original strand, 43101896 - 43101977
Alignment:
Q  653 tacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataatt 734  Q
    |||||||||| |||||||||||||||||| || |||| | | ||||||||| |||||||||| |||||||||||||||||||    
T  43101896 tacatcatttggtcccttaacttatttttggttttcattttggtcctctaattataaagtgtctcaatttggtcccataatt 43101977  T

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Target: chr3; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 644 - 732
Target Start/End: Original strand, 41386123 - 41386211
Alignment:
Q  644 aaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    ||||||||||||||| ||| |||||||||||||||||| || |||| | | |||| ||||||||||||||| |||||||||| ||||||    
T  41386123 aaggcttaatacatcgtttggtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtctcaatttggttccataa 41386211  T

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Target: chr3; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 644 - 732
Target Start/End: Complemental strand, 42634009 - 42633921
Alignment:
Q  644 aaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    ||||||||||||||||||| ||||||||||||||||||  | |||| | | |||| ||||||||| ||||| |||||||||||||||||    
T  42634009 aaggcttaatacatcatttggtcccttaacttatttttgattttcaatttggtcccctaactatagagtgtctcaatttggtcccataa 42633921  T

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Target: chr3; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 646 - 734
Target Start/End: Complemental strand, 54654087 - 54653999
Alignment:
Q  646 ggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataatt 734  Q
    ||||||||||||||||| |||||||||||||||||| |  |||| | | ||||  |||||||||||||| |||||||||||||||||||    
T  54654087 ggcttaatacatcatttggtcccttaacttatttttggatttcattttggtcccttaactataaagtgtctcaatttggtcccataatt 54653999  T

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Target: chr3; HSP #12
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 645 - 732
Target Start/End: Original strand, 8371214 - 8371301
Alignment:
Q  645 aggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    ||||||||||||||||||  |||||||||||||||||||| |||| | | |||| ||||||||||| ||| |||||||||| ||||||    
T  8371214 aggcttaatacatcatttgatcccttaacttattttttgttttcattttggtcccctaactataaaatgtctcaatttggttccataa 8371301  T

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Target: chr3; HSP #13
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 646 - 769
Target Start/End: Original strand, 25583109 - 25583232
Alignment:
Q  646 ggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataatttttcctctgtt 745  Q
    ||||||||||||||||||||||||||||||||||||  | |||||| | |||| |||||||| ||  || ||||||||||||||||| | |||  | |||    
T  25583109 ggcttaatacatcatttagtcccttaacttatttttgattttcactttggtcccctaactattaaacgtctcaatttggtcccataagtcttctgccgtt 25583208  T
Q  746 tactaaaatggtcctctttgttaa 769  Q
    |||||   ||||||||| ||||||    
T  25583209 tactattttggtcctctctgttaa 25583232  T

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Target: chr3; HSP #14
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 640 - 751
Target Start/End: Original strand, 48252922 - 48253033
Alignment:
Q  640 atttaaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataatttttcc 739  Q
    |||| ||||||||| |||  ||| ||||||||||||||| ||||| || | | | |||| ||||||||||||||| ||||||||||||||||| | ||||    
T  48252922 attttaggcttaatgcatgctttggtcccttaacttattctttgtttttattttggtcccctaactataaagtgtctcaatttggtcccataagtcttcc 48253021  T
Q  740 tctgtttactaa 751  Q
    || |||||||||    
T  48253022 tccgtttactaa 48253033  T

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Target: chr3; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 646 - 728
Target Start/End: Complemental strand, 17350223 - 17350141
Alignment:
Q  646 ggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtccc 728  Q
    ||||||||||||||||| |||||||||||||||||| || |||| | |  ||| ||||||||||||||| |||||||||||||    
T  17350223 ggcttaatacatcatttggtcccttaacttatttttggttttcaatttgttcccctaactataaagtgtctcaatttggtccc 17350141  T

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Target: chr3; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 646 - 732
Target Start/End: Original strand, 42632701 - 42632787
Alignment:
Q  646 ggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    ||||||||||||||||| ||||||||||||| |||| || |||| | | |||| ||||||||||||||| |||||||| ||||||||    
T  42632701 ggcttaatacatcatttggtcccttaacttacttttggttttcaatttggtcccctaactataaagtgtctcaatttgatcccataa 42632787  T

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Target: chr3; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 646 - 732
Target Start/End: Complemental strand, 51401472 - 51401386
Alignment:
Q  646 ggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    ||||||||||||  | | |||||||||||||||||| || |||||| | |||| ||||||||||||||| |||||||||||||||||    
T  51401472 ggcttaatacatgctctggtcccttaacttatttttggttttcactttggtcccctaactataaagtgtctcaatttggtcccataa 51401386  T

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Target: chr3; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 646 - 737
Target Start/End: Original strand, 7820385 - 7820476
Alignment:
Q  646 ggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataattttt 737  Q
    ||||||||||||  ||| ||||||||||||||||||    |||| | | |||||||||||||||||||||||||||||| ||||||| ||||    
T  7820385 ggcttaatacatgctttggtcccttaacttatttttgaatttcattttggtcctctaactataaagtgtttcaatttggacccataaatttt 7820476  T

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Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 646 - 732
Target Start/End: Complemental strand, 47808227 - 47808141
Alignment:
Q  646 ggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    |||||||||||||| ||||||||||||||||||||| |  |||||| | || |  |||||||||||||| ||||||||||| |||||    
T  47808227 ggcttaatacatcacttagtcccttaacttatttttggatttcactttggttccttaactataaagtgtctcaatttggtctcataa 47808141  T

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Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 645 - 738
Target Start/End: Original strand, 51400209 - 51400302
Alignment:
Q  645 aggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataatttttc 738  Q
    |||||||||||||  ||| |||||||||||||||||| || |||||| |  | | ||||||||||||||| ||||||| ||||||||| |||||    
T  51400209 aggcttaatacatgttttggtcccttaacttatttttggttttcactttgattccctaactataaagtgtctcaatttagtcccataaattttc 51400302  T

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Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 644 - 732
Target Start/End: Original strand, 19621998 - 19622086
Alignment:
Q  644 aaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    |||| |||||||||||||| |||| |||| |||||||| || |||||| | |||| ||||||||||||||| ||||||| ||| |||||    
T  19621998 aagggttaatacatcatttggtcctttaagttatttttggttttcactttggtcccctaactataaagtgtctcaatttagtctcataa 19622086  T

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Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 645 - 728
Target Start/End: Complemental strand, 19623041 - 19622958
Alignment:
Q  645 aggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtccc 728  Q
    ||||||||||||||| ||  |||||||||||||||||||| |||||| | |||  ||||||||||||||| ||||  |||||||    
T  19623041 aggcttaatacatcacttgctcccttaacttattttttgttttcactttggtctcctaactataaagtgtctcaaactggtccc 19622958  T

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Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 644 - 723
Target Start/End: Original strand, 33563942 - 33564021
Alignment:
Q  644 aaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttg 723  Q
    ||||||||||||||  ||| |||||||||||||||||| |  |||| | |||||| ||||||||||||||| ||||||||    
T  33563942 aaggcttaatacatgttttggtcccttaacttatttttggatttcattttagtcccctaactataaagtgtctcaatttg 33564021  T

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Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 649 - 728
Target Start/End: Original strand, 39133015 - 39133094
Alignment:
Q  649 ttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtccc 728  Q
    ||||||||||||||  || |||||||||||||| || |||| | | |||| ||||||||||||||| |||||||||||||    
T  39133015 ttaatacatcatttgatctcttaacttatttttggttttcaatttggtcccctaactataaagtgtctcaatttggtccc 39133094  T

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Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 645 - 732
Target Start/End: Complemental strand, 49334459 - 49334372
Alignment:
Q  645 aggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    ||||||||||||||||||| ||| || ||||||||||||| |||| | | ||||| |||||||||| ||| ||||| |||||| ||||    
T  49334459 aggcttaatacatcatttaatcctttgacttattttttgttttcattttggtcctttaactataaattgtctcaatatggtccgataa 49334372  T

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Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 646 - 732
Target Start/End: Original strand, 29536709 - 29536795
Alignment:
Q  646 ggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    ||||||||||||  ||| ||||||| |||||||||| |  |||| | |  ||||||||||||||||||| |||||||||||||||||    
T  29536709 ggcttaatacatgttttggtcccttgacttatttttggatttcattttgatcctctaactataaagtgtctcaatttggtcccataa 29536795  T

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Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 669 - 751
Target Start/End: Complemental strand, 47767048 - 47766967
Alignment:
Q  669 ttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataatttttcctctgtttactaa 751  Q
    ||||||||||||| || |||| | | |||| ||||||||||||||| ||||||||||||||||| | |||||| |||||||||    
T  47767048 ttaacttatttttggttttcattttggtcc-ctaactataaagtgtctcaatttggtcccataagtcttcctccgtttactaa 47766967  T

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Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 634 - 732
Target Start/End: Complemental strand, 47855471 - 47855373
Alignment:
Q  634 tatttgatttaaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    ||||| |||| |||||||||||||  ||| |||||||||||||||||| |  |||| | | ||||  |||||||||||||| |||||||||||| ||||    
T  47855471 tattttattttaggcttaatacatgctttggtcccttaacttatttttggatttcattttggtccgttaactataaagtgtctcaatttggtcctataa 47855373  T

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Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 645 - 706
Target Start/End: Original strand, 26797313 - 26797374
Alignment:
Q  645 aggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaacta 706  Q
    ||||||||||||||||||||||||||||||||||| || | ||||| ||||||  |||||||    
T  26797313 aggcttaatacatcatttagtcccttaacttatttctttttttcacaatagtcacctaacta 26797374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 647 - 732
Target Start/End: Original strand, 53808314 - 53808399
Alignment:
Q  647 gcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    |||||||||||||||| |||||||||||||||||  || || | | | |||  ||||||||||||||| ||||| |||||||||||    
T  53808314 gcttaatacatcatttggtcccttaacttattttcggttttgaatttggtctcctaactataaagtgtctcaatctggtcccataa 53808399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 644 - 732
Target Start/End: Complemental strand, 11220781 - 11220693
Alignment:
Q  644 aaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    ||||||||||||||  ||| ||||||||||||||||||    |||| | | |||| ||||||||||||||| |||||||||||| ||||    
T  11220781 aaggcttaatacatgctttggtcccttaacttatttttgaatttcattttggtcccctaactataaagtgtctcaatttggtcctataa 11220693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 644 - 732
Target Start/End: Complemental strand, 25585956 - 25585868
Alignment:
Q  644 aaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    ||||||||||| || |||| ||||||||| ||||||||| | |||||| | ||||||||||||| ||  || ||||||||||| |||||    
T  25585956 aaggcttaatatattatttggtcccttaatttattttttattttcactctggtcctctaactattaaacgtctcaatttggtctcataa 25585868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 644 - 728
Target Start/End: Original strand, 32973132 - 32973216
Alignment:
Q  644 aaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtccc 728  Q
    ||||||||||||||  ||| |||||||||||||||||  |  |||| | | |||| ||||||||||||||| |||||||||||||    
T  32973132 aaggcttaatacatgctttggtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtccc 32973216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 640 - 728
Target Start/End: Complemental strand, 48035451 - 48035363
Alignment:
Q  640 atttaaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtccc 728  Q
    ||||| ||||||||||||  ||| |||||||||||||||||  |  |||| | | |||| ||||||||||||||| |||||||||||||    
T  48035451 atttatggcttaatacatgctttggtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtccc 48035363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 646 - 738
Target Start/End: Complemental strand, 49122123 - 49122031
Alignment:
Q  646 ggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataatttttc 738  Q
    ||||||||| ||||||| |||| ||||||||||||| || |||| | | |||   |||||||||||||| ||||||||||| ||||| |||||    
T  49122123 ggcttaatatatcatttggtcctttaacttatttttggttttcattttggtctcttaactataaagtgtctcaatttggtctcataagttttc 49122031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 644 - 728
Target Start/End: Original strand, 53047890 - 53047974
Alignment:
Q  644 aaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtccc 728  Q
    ||||||||||||||  ||| |||||||||||||||||  |  |||| | | |||| ||||||||||||||| |||||||||||||    
T  53047890 aaggcttaatacatgctttggtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtccc 53047974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 649 - 732
Target Start/End: Complemental strand, 49898571 - 49898488
Alignment:
Q  649 ttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    |||||| ||||||| |||| |||||||||||||||| |||| | ||||| |||||| ||||| | ||| |||||| ||||||||    
T  49898571 ttaatatatcatttcgtccattaacttattttttgttttcagtttagtcttctaaccataaaatattttaatttgatcccataa 49898488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 646 - 728
Target Start/End: Complemental strand, 32974344 - 32974262
Alignment:
Q  646 ggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtccc 728  Q
    ||||||||||||  ||| |||||||||||||||||  |  |||| | | |||| ||||||||||||||| |||||||||||||    
T  32974344 ggcttaatacatgctttggtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtccc 32974262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 646 - 732
Target Start/End: Complemental strand, 32980573 - 32980487
Alignment:
Q  646 ggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    ||||||||| |||||||  ||| |||||||||||| ||| |||| | | |||| ||||||| ||||||| |||||||||||| ||||    
T  32980573 ggcttaatatatcatttgatccattaacttattttctgttttcaatttggtcccctaactacaaagtgtctcaatttggtcctataa 32980487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 645 - 738
Target Start/End: Original strand, 32979082 - 32979175
Alignment:
Q  645 aggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataatttttc 738  Q
    |||||| ||||||  ||| ||||||||||| ||||||    |||| | | |||||||||||||||||||| |||||||| |||||||| |||||    
T  32979082 aggcttgatacatgctttggtcccttaactaatttttaaatttcattttggtcctctaactataaagtgtctcaatttgatcccataaattttc 32979175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 643 - 728
Target Start/End: Complemental strand, 39288563 - 39288478
Alignment:
Q  643 taaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtccc 728  Q
    |||||||||||||||  ||| ||| |||||||||||||  |  |||| | | |||| ||||||||||||||| |||||||||||||    
T  39288563 taaggcttaatacatgctttggtcacttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtccc 39288478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 674 - 750
Target Start/End: Original strand, 10986675 - 10986751
Alignment:
Q  674 ttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataatttttcctctgtttacta 750  Q
    |||||||| || |||||| | ||||  ||||||||||||||||||||||||||| |||| |||| | | ||||||||    
T  10986675 ttatttttggttttcactttggtccattaactataaagtgtttcaatttggtcctataaattttacgccgtttacta 10986751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 664 - 728
Target Start/End: Original strand, 39287483 - 39287547
Alignment:
Q  664 gtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtccc 728  Q
    |||||||||||||||||  |  |||| | | |||||||||||||||||||| |||||||||||||    
T  39287483 gtcccttaacttattttcggatttcattttggtcctctaactataaagtgtctcaatttggtccc 39287547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 648 - 732
Target Start/End: Original strand, 47806815 - 47806899
Alignment:
Q  648 cttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    |||||||||||||||||| ||||||||||||||| |  |||| | | ||||  ||| |||||||||| |||||||| ||| ||||    
T  47806815 cttaatacatcatttagtaccttaacttatttttggatttcattttggtcccttaattataaagtgtctcaatttgatcctataa 47806899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 645 - 748
Target Start/End: Complemental strand, 2225146 - 2225043
Alignment:
Q  645 aggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataatttttcctctgt 744  Q
    |||||||||||||  ||| |||||||||||||||||| |  |||| | | |||| |||||| |||| ||| ||||||||||| | ||| | | |||||||    
T  2225146 aggcttaatacatgctttggtcccttaacttatttttggatttcaatttggtcccctaactttaaactgtctcaatttggtctcctaagtgtacctctgt 2225047  T
Q  745 ttac 748  Q
    ||||    
T  2225046 ttac 2225043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 646 - 725
Target Start/End: Original strand, 17345306 - 17345385
Alignment:
Q  646 ggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggt 725  Q
    |||||||||||| |||| |||||||||||||||||| || ||||   | |||| ||||||| ||||| | ||||||||||    
T  17345306 ggcttaatacattatttggtcccttaacttatttttggttttcaggttggtcccctaactaaaaagtatctcaatttggt 17345385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 644 - 727
Target Start/End: Original strand, 19579213 - 19579296
Alignment:
Q  644 aaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcc 727  Q
    ||||||||||||||  ||| |||||||||||||||||  |  |||| | | |||| ||||||||||| ||| ||||||||||||    
T  19579213 aaggcttaatacatgctttggtcccttaacttattttcagatttcattttggtcccctaactataaaatgtctcaatttggtcc 19579296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 645 - 680
Target Start/End: Complemental strand, 48338239 - 48338204
Alignment:
Q  645 aggcttaatacatcatttagtcccttaacttatttt 680  Q
    |||||||||||||||||| |||||||||||||||||    
T  48338239 aggcttaatacatcatttggtcccttaacttatttt 48338204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 645 - 728
Target Start/End: Original strand, 52292588 - 52292671
Alignment:
Q  645 aggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtccc 728  Q
    |||||||||||||  ||| |||||||||||||||||  |  |||| | | |||| ||||||||||||||| ||||||| |||||    
T  52292588 aggcttaatacatgctttggtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttagtccc 52292671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 644 - 727
Target Start/End: Original strand, 53342709 - 53342792
Alignment:
Q  644 aaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcc 727  Q
    ||||||||||||||  ||| || ||||||||||||||  |  |||| | | |||| ||||||||||||||| ||||||||||||    
T  53342709 aaggcttaatacatgctttggttccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtcc 53342792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 315 - 357
Target Start/End: Original strand, 11816388 - 11816430
Alignment:
Q  315 atgacttctttgatagaaggggctctaggggggtggatgttga 357  Q
    ||||||||||||||  | |||||||||||||||||||||||||    
T  11816388 atgacttctttgatcaatggggctctaggggggtggatgttga 11816430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 649 - 727
Target Start/End: Complemental strand, 52293641 - 52293563
Alignment:
Q  649 ttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcc 727  Q
    |||||||||  ||| |||||||||||||||||  |  |||| | | |||| ||||||||||||||| ||||||||||||    
T  52293641 ttaatacatgctttggtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtcc 52293563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 642 - 683
Target Start/End: Complemental strand, 10817864 - 10817823
Alignment:
Q  642 ttaaggcttaatacatcatttagtcccttaacttattttttg 683  Q
    |||||||||||| | |||||| ||||||||||||||||||||    
T  10817864 ttaaggcttaattcctcatttggtcccttaacttattttttg 10817823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 647 - 732
Target Start/End: Complemental strand, 13078071 - 13077986
Alignment:
Q  647 gcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    ||||||||||| |||  ||| ||||||||||||||  | |||| | | ||||||||| |||||| ||| | |||||||||||||||    
T  13078071 gcttaatacattattaggtctcttaacttatttttgattttcaatttggtcctctaagtataaaatgtcttaatttggtcccataa 13077986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 645 - 682
Target Start/End: Complemental strand, 34903115 - 34903078
Alignment:
Q  645 aggcttaatacatcatttagtcccttaacttatttttt 682  Q
    |||||||||||||||||||||||||||| ||| |||||    
T  34903115 aggcttaatacatcatttagtcccttaatttaattttt 34903078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 646 - 707
Target Start/End: Original strand, 48336342 - 48336403
Alignment:
Q  646 ggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactat 707  Q
    |||||||||||||||||  ||||||||||||||||  || |||| | | |||||||||||||    
T  48336342 ggcttaatacatcatttgctcccttaacttattttcagttttcaatttggtcctctaactat 48336403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 644 - 681
Target Start/End: Complemental strand, 51213700 - 51213663
Alignment:
Q  644 aaggcttaatacatcatttagtcccttaacttattttt 681  Q
    ||||||||||||||  ||||||||||||||||||||||    
T  51213700 aaggcttaatacatgttttagtcccttaacttattttt 51213663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 651 - 732
Target Start/End: Complemental strand, 77297 - 77216
Alignment:
Q  651 aatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    |||||||||||||||| ||||||||||||||||| |||||| | |||  |||||||||||| ||||||||||||||||||||    
T  77297 aatacatcatttagtctcttaacttattttttgttttcactttggtctcctaactataaagcgtttcaatttggtcccataa 77216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 53; Significance: 5e-21; HSPs: 2)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 640 - 732
Target Start/End: Original strand, 23395 - 23487
Alignment:
Q  640 atttaaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    ||||||||||||||||||||| | |||||||||||||||||| || |||| | | |||| ||||||||||| ||| |||||||||||||||||    
T  23395 atttaaggcttaatacatcatatggtcccttaacttatttttggttttcagtttggtcccctaactataaaatgtctcaatttggtcccataa 23487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #2
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 643 - 728
Target Start/End: Complemental strand, 24939 - 24854
Alignment:
Q  643 taaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtccc 728  Q
    |||||||||||||||| ||| ||||||||| |||||||| || |||| | | |||| |||| ||||||||||||||||||||||||    
T  24939 taaggcttaatacatcgtttggtcccttaatttatttttggttttcagtttggtcccctaattataaagtgtttcaatttggtccc 24854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 51; Significance: 8e-20; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 644 - 750
Target Start/End: Complemental strand, 2388 - 2282
Alignment:
Q  644 aaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataatttttcctctg 743  Q
    ||||||||||||||  ||| |||||||||||||||||| || |||| | | |||| |||| |||||||||||||||||||||||||||| | |||  |||    
T  2388 aaggcttaatacatgctttggtcccttaacttatttttggttttcattttggtcccctaattataaagtgtttcaatttggtcccataactcttctactg 2289  T
Q  744 tttacta 750  Q
    |||||||    
T  2288 tttacta 2282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 48; Significance: 5e-18; HSPs: 2)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 645 - 728
Target Start/End: Original strand, 11700 - 11783
Alignment:
Q  645 aggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtccc 728  Q
    |||| ||||||||| ||| ||||||||||||||||||| | |||| | |||||| |||| ||||||||||||||||||||||||    
T  11700 aggcgtaatacatcgtttggtcccttaacttattttttattttcagtttagtcccctaattataaagtgtttcaatttggtccc 11783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 651 - 732
Target Start/End: Complemental strand, 13320 - 13239
Alignment:
Q  651 aatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    |||||||||| |  ||||||||||||||||| || |||| | | |||| ||||||||||| ||| ||||||| |||||||||    
T  13320 aatacatcatatgatcccttaacttatttttggttttcagtttggtcccctaactataaaatgtctcaatttcgtcccataa 13239  T

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Target: scaffold0024 (Bit Score: 46; Significance: 8e-17; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 645 - 714
Target Start/End: Complemental strand, 73108 - 73039
Alignment:
Q  645 aggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgt 714  Q
    ||||||||||||||||||||||||||||||||||||| || |||||| | |||| ||||| |||||||||    
T  73108 aggcttaatacatcatttagtcccttaacttatttttggttttcactttggtcccctaacaataaagtgt 73039  T

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Target: scaffold0025 (Bit Score: 45; Significance: 3e-16; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 648 - 732
Target Start/End: Complemental strand, 56819 - 56735
Alignment:
Q  648 cttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    ||||||| ||||||| ||||||||||||||||||||  |||||| | |||| |||| |||||||||| |||||||||||| ||||    
T  56819 cttaataaatcatttggtcccttaacttattttttgatttcactttggtcccctaattataaagtgtctcaatttggtcctataa 56735  T

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Target: scaffold0025; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 654 - 762
Target Start/End: Original strand, 54594 - 54702
Alignment:
Q  654 acatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataatttttcctctgtttactaaaa 753  Q
    ||||||||| | |||||||| || |||| || || | | | ||||| ||| |||||||||| ||||||||||||||||| | ||||||||||||| ||      
T  54594 acatcatttggccccttaacgtaattttggtttttattttggtcctttaattataaagtgtctcaatttggtcccataaatcttcctctgtttaccaatg 54693  T
Q  754 tggtcctct 762  Q
    |||||||||    
T  54694 tggtcctct 54702  T

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Target: scaffold0003 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 649 - 732
Target Start/End: Complemental strand, 48574 - 48491
Alignment:
Q  649 ttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    |||||||||||||| |||||||||||||||||| |  |||| | | ||||| |||||||||||||| |||||||| ||||||||    
T  48574 ttaatacatcatttggtcccttaacttatttttggatttcattttggtcctttaactataaagtgtctcaatttgatcccataa 48491  T

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Target: scaffold0003; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 647 - 750
Target Start/End: Original strand, 47066 - 47169
Alignment:
Q  647 gcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataatttttcctctgttt 746  Q
    |||||||||||||||| ||||||||||||||||||    |||| | |  |||  ||||| |||| ||| ||||||||||||||||| | ||| || ||||    
T  47066 gcttaatacatcatttggtcccttaacttatttttgaatttcattttgatcccttaactttaaattgtctcaatttggtcccataaatcttcttccgttt 47165  T
Q  747 acta 750  Q
    ||||    
T  47166 acta 47169  T

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Target: scaffold0051 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 648 - 732
Target Start/End: Complemental strand, 40020 - 39936
Alignment:
Q  648 cttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    |||||||||| |||| ||| |||||||||||||| |  |||||| | |||| |||| |||||||||| |||||||||||||||||    
T  40020 cttaatacattatttggtctcttaacttatttttggatttcactttggtcccctaagtataaagtgtctcaatttggtcccataa 39936  T

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Target: scaffold2127 (Bit Score: 38; Significance: 0.000000000005; HSPs: 1)
Name: scaffold2127
Description:

Target: scaffold2127; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 640 - 725
Target Start/End: Complemental strand, 642 - 557
Alignment:
Q  640 atttaaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggt 725  Q
    |||| ||||||||||||||||||  ||| ||||||||||||| || |||| |   |||| ||||||||||||||| ||||||||||    
T  642 attttaggcttaatacatcatttgatccattaacttatttttggttttcaattaggtcccctaactataaagtgtctcaatttggt 557  T

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Target: scaffold0013 (Bit Score: 36; Significance: 0.00000000007; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 645 - 732
Target Start/End: Original strand, 96154 - 96241
Alignment:
Q  645 aggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataa 732  Q
    |||||||||||||||||| |||| ||||||||||||   | |||| | | |||| ||||||||||||||| |||||||| ||| ||||    
T  96154 aggcttaatacatcatttggtccattaacttattttcgattttcaatttggtcccctaactataaagtgtctcaatttgatccgataa 96241  T

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Target: scaffold0013; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 645 - 727
Target Start/End: Complemental strand, 96937 - 96855
Alignment:
Q  645 aggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcc 727  Q
    ||||||||||||||||||  ||||||||||||||||| || |||| | |  ||| ||||| ||||| ||| ||||||||||||    
T  96937 aggcttaatacatcatttgatcccttaacttatttttggttttcaatttgatcccctaacaataaactgtctcaatttggtcc 96855  T

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Target: scaffold0687 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0687
Description:

Target: scaffold0687; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 645 - 762
Target Start/End: Complemental strand, 6686 - 6569
Alignment:
Q  645 aggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtcccataatttttcctctgt 744  Q
    |||||||||||||  |||||| |||||| ||||||||  | |||| | | ||||||||| |||||| ||| |||||||||| | |||| | |||||| ||    
T  6686 aggcttaatacatgctttagttccttaaattatttttgattttcattttggtcctctaattataaaatgtctcaatttggttctataagtcttcctccgt 6587  T
Q  745 ttactaaaatggtcctct 762  Q
    ||  ||| ||||||||||    
T  6586 ttcttaatatggtcctct 6569  T

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Target: scaffold0177 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 643 - 728
Target Start/End: Original strand, 1747 - 1832
Alignment:
Q  643 taaggcttaatacatcatttagtcccttaacttattttttgtattcactatagtcctctaactataaagtgtttcaatttggtccc 728  Q
    |||||||||||||||  ||| |||||||||||||||||  |  |||| | | |||| |||| |||||||||| |||||||||||||    
T  1747 taaggcttaatacatgctttggtcccttaacttattttcggatttcattttggtcccctaattataaagtgtctcaatttggtccc 1832  T

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Target: scaffold0107 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 315 - 357
Target Start/End: Complemental strand, 21284 - 21242
Alignment:
Q  315 atgacttctttgatagaaggggctctaggggggtggatgttga 357  Q
    ||||||||||||||  | |||||||||||||||||||||||||    
T  21284 atgacttctttgatcaatggggctctaggggggtggatgttga 21242  T

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Target: scaffold0034 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 642 - 680
Target Start/End: Original strand, 98040 - 98078
Alignment:
Q  642 ttaaggcttaatacatcatttagtcccttaacttatttt 680  Q
    |||||||||||||||||||||  ||||||||||||||||    
T  98040 ttaaggcttaatacatcatttgatcccttaacttatttt 98078  T

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Target: scaffold1827 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold1827
Description:

Target: scaffold1827; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 695 - 728
Target Start/End: Complemental strand, 1131 - 1098
Alignment:
Q  695 gtcctctaactataaagtgtttcaatttggtccc 728  Q
    |||||||||||||||||||| |||||||||||||    
T  1131 gtcctctaactataaagtgtctcaatttggtccc 1098  T

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Target: scaffold0839 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 644 - 681
Target Start/End: Original strand, 18 - 55
Alignment:
Q  644 aaggcttaatacatcatttagtcccttaacttattttt 681  Q
    |||||||||||||| |||| ||||||||||||||||||    
T  18 aaggcttaatacatgatttggtcccttaacttattttt 55  T

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