View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4939-Insertion-5 (Length: 758)

Name: NF4939-Insertion-5
Description: NF4939
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4939-Insertion-5
NF4939-Insertion-5
[»] chr1 (38 HSPs)
chr1 (8-468)||(2343000-2343460)
chr1 (578-758)||(2342711-2342891)
chr1 (322-403)||(5084946-5085027)
chr1 (420-468)||(3072233-3072282)
chr1 (321-406)||(5321878-5321963)
chr1 (429-468)||(34028469-34028508)
chr1 (332-403)||(36085135-36085206)
chr1 (430-468)||(20564871-20564909)
chr1 (322-403)||(3143569-3143650)
chr1 (322-403)||(15512638-15512719)
chr1 (420-468)||(23982550-23982599)
chr1 (322-403)||(28948821-28948902)
chr1 (424-465)||(31807935-31807976)
chr1 (322-403)||(32715958-32716038)
chr1 (420-468)||(34012583-34012632)
chr1 (420-468)||(44652819-44652868)
chr1 (422-466)||(47070921-47070966)
chr1 (420-468)||(48721826-48721875)
chr1 (420-468)||(51390495-51390544)
chr1 (428-468)||(3143499-3143539)
chr1 (420-468)||(8984620-8984668)
chr1 (421-468)||(47643636-47643684)
chr1 (352-403)||(3831212-3831263)
chr1 (420-466)||(30336157-30336204)
chr1 (322-397)||(51997127-51997202)
chr1 (337-403)||(34696755-34696821)
chr1 (420-468)||(3831143-3831192)
chr1 (431-468)||(4817876-4817913)
chr1 (431-468)||(4829676-4829713)
chr1 (420-468)||(5085047-5085096)
chr1 (420-468)||(5321981-5322030)
chr1 (420-468)||(15179506-15179555)
chr1 (420-468)||(25063306-25063355)
chr1 (364-401)||(27531289-27531326)
chr1 (420-468)||(29140612-29140661)
chr1 (420-468)||(32152254-32152303)
chr1 (420-468)||(33231936-33231985)
chr1 (420-468)||(46732918-46732967)
[»] chr5 (31 HSPs)
chr5 (8-468)||(30317846-30318305)
chr5 (571-758)||(30348187-30348370)
chr5 (311-468)||(30347929-30348084)
chr5 (420-468)||(5151159-5151207)
chr5 (420-468)||(29866286-29866335)
chr5 (351-403)||(9946243-9946295)
chr5 (332-403)||(25690520-25690591)
chr5 (420-468)||(4738727-4738776)
chr5 (420-468)||(5845273-5845322)
chr5 (322-403)||(27925439-27925520)
chr5 (322-403)||(36177459-36177540)
chr5 (322-403)||(39690343-39690424)
chr5 (420-468)||(10656687-10656735)
chr5 (420-467)||(42644436-42644484)
chr5 (353-400)||(3247160-3247207)
chr5 (353-396)||(40979098-40979141)
chr5 (420-461)||(10523232-10523274)
chr5 (322-400)||(25017528-25017606)
chr5 (420-468)||(3558985-3559034)
chr5 (420-468)||(4857452-4857501)
chr5 (416-468)||(5764177-5764230)
chr5 (420-468)||(7736077-7736126)
chr5 (420-468)||(8717917-8717966)
chr5 (420-468)||(9946316-9946365)
chr5 (420-468)||(20946184-20946233)
chr5 (322-403)||(27642668-27642749)
chr5 (322-403)||(31641047-31641128)
chr5 (420-468)||(35568963-35569012)
chr5 (420-468)||(38972085-38972134)
chr5 (420-468)||(40979170-40979219)
chr5 (420-465)||(43060470-43060515)
[»] chr2 (37 HSPs)
chr2 (8-240)||(3645679-3645911)
chr2 (228-468)||(3645420-3645660)
chr2 (571-758)||(3645129-3645317)
chr2 (321-403)||(31644300-31644382)
chr2 (332-403)||(7278481-7278552)
chr2 (415-468)||(40346035-40346089)
chr2 (336-468)||(44424692-44424826)
chr2 (420-468)||(13534502-13534551)
chr2 (318-403)||(17663790-17663875)
chr2 (318-403)||(20362148-20362233)
chr2 (332-397)||(27749639-27749704)
chr2 (322-406)||(45214888-45214972)
chr2 (420-466)||(8065031-8065078)
chr2 (332-403)||(41865881-41865952)
chr2 (329-403)||(37355203-37355277)
chr2 (321-403)||(41327661-41327743)
chr2 (420-468)||(3237820-3237869)
chr2 (420-468)||(7255698-7255747)
chr2 (420-468)||(27297674-27297723)
chr2 (431-468)||(35178764-35178801)
chr2 (321-406)||(40345933-40346018)
chr2 (420-468)||(41665807-41665856)
chr2 (428-468)||(23464780-23464820)
chr2 (319-403)||(38449569-38449653)
chr2 (322-406)||(45150600-45150684)
chr2 (420-466)||(25731145-25731192)
chr2 (420-466)||(32677574-32677621)
chr2 (415-468)||(2131854-2131908)
chr2 (428-466)||(16808791-16808829)
chr2 (428-466)||(16848072-16848110)
chr2 (322-403)||(247826-247907)
chr2 (420-468)||(2048789-2048838)
chr2 (420-460)||(9718131-9718172)
chr2 (431-468)||(17250932-17250969)
chr2 (319-404)||(24775030-24775115)
chr2 (420-468)||(34330099-34330148)
chr2 (420-468)||(44274478-44274527)
[»] chr7 (27 HSPs)
chr7 (319-403)||(10685250-10685334)
chr7 (328-403)||(29635905-29635980)
chr7 (322-468)||(2276437-2276585)
chr7 (416-466)||(10408523-10408574)
chr7 (322-468)||(1324805-1324954)
chr7 (332-466)||(19235933-19236073)
chr7 (335-403)||(35128551-35128619)
chr7 (420-464)||(37048136-37048180)
chr7 (320-403)||(48767731-48767814)
chr7 (322-404)||(40263877-40263958)
chr7 (420-468)||(4089459-4089508)
chr7 (420-468)||(21809606-21809655)
chr7 (416-468)||(40263808-40263861)
chr7 (431-468)||(42983585-42983622)
chr7 (428-468)||(13907711-13907751)
chr7 (420-468)||(46783801-46783849)
chr7 (430-468)||(18122012-18122050)
chr7 (320-381)||(4089357-4089418)
chr7 (431-468)||(8318652-8318689)
chr7 (322-379)||(20124362-20124419)
chr7 (416-468)||(27170108-27170161)
chr7 (431-468)||(28038859-28038896)
chr7 (420-468)||(37491578-37491627)
chr7 (427-468)||(39102746-39102787)
chr7 (420-468)||(40741049-40741098)
chr7 (420-468)||(48610095-48610144)
chr7 (420-468)||(48767662-48767711)
[»] chr8 (38 HSPs)
chr8 (329-403)||(57054-57128)
chr8 (322-403)||(24512025-24512106)
chr8 (337-403)||(38773222-38773288)
chr8 (332-468)||(31746275-31746414)
chr8 (331-403)||(38761224-38761296)
chr8 (332-406)||(17933866-17933940)
chr8 (322-403)||(25185199-25185280)
chr8 (420-468)||(45203855-45203904)
chr8 (322-402)||(40790955-40791035)
chr8 (321-405)||(45283345-45283429)
chr8 (421-468)||(14846883-14846930)
chr8 (428-466)||(14577621-14577659)
chr8 (430-468)||(41371775-41371813)
chr8 (420-468)||(1769408-1769457)
chr8 (427-468)||(7727317-7727358)
chr8 (420-468)||(23399737-23399786)
chr8 (420-468)||(25198386-25198435)
chr8 (420-468)||(36437598-36437647)
chr8 (420-468)||(38761318-38761367)
chr8 (428-468)||(12762939-12762979)
chr8 (428-468)||(30262507-30262547)
chr8 (337-397)||(34158088-34158148)
chr8 (420-468)||(37956218-37956266)
chr8 (332-403)||(31252524-31252595)
chr8 (431-466)||(41087073-41087108)
chr8 (430-468)||(40807982-40808020)
chr8 (420-468)||(57148-57197)
chr8 (314-403)||(2303258-2303347)
chr8 (314-403)||(2327852-2327941)
chr8 (416-468)||(7172316-7172369)
chr8 (322-403)||(24962224-24962305)
chr8 (420-468)||(26878688-26878737)
chr8 (431-468)||(33385343-33385380)
chr8 (427-468)||(36309564-36309605)
chr8 (420-468)||(40337151-40337200)
chr8 (420-468)||(40517837-40517886)
chr8 (322-403)||(40517906-40517987)
chr8 (322-403)||(43980442-43980523)
[»] chr3 (27 HSPs)
chr3 (332-403)||(46048688-46048759)
chr3 (332-468)||(20945170-20945310)
chr3 (321-403)||(29645489-29645571)
chr3 (420-468)||(26517176-26517225)
chr3 (420-468)||(50363123-50363172)
chr3 (420-467)||(41308737-41308785)
chr3 (332-403)||(12077611-12077682)
chr3 (322-381)||(29676601-29676660)
chr3 (420-468)||(5504536-5504585)
chr3 (322-403)||(11345485-11345566)
chr3 (38-99)||(27843948-27844009)
chr3 (420-468)||(29349474-29349523)
chr3 (420-468)||(31531089-31531138)
chr3 (420-468)||(48309540-48309589)
chr3 (420-468)||(26043115-26043162)
chr3 (431-467)||(33411948-33411984)
chr3 (322-381)||(26517075-26517134)
chr3 (351-406)||(33411865-33411920)
chr3 (420-466)||(40645772-40645819)
chr3 (430-468)||(33287962-33288000)
chr3 (416-468)||(22659676-22659729)
chr3 (420-468)||(28229261-28229310)
chr3 (420-468)||(30476137-30476186)
chr3 (420-468)||(31819502-31819551)
chr3 (420-468)||(35055882-35055931)
chr3 (420-465)||(41825099-41825144)
chr3 (322-403)||(44083792-44083873)
[»] chr4 (36 HSPs)
chr4 (321-403)||(31917541-31917623)
chr4 (420-468)||(30153182-30153230)
chr4 (319-403)||(31840261-31840345)
chr4 (351-466)||(38136454-38136568)
chr4 (320-403)||(46729471-46729554)
chr4 (337-403)||(37624997-37625063)
chr4 (346-468)||(52552394-52552519)
chr4 (332-406)||(54701162-54701236)
chr4 (420-468)||(52226116-52226165)
chr4 (420-468)||(20291437-20291485)
chr4 (322-403)||(51918513-51918596)
chr4 (420-468)||(20185615-20185664)
chr4 (420-468)||(25477322-25477371)
chr4 (420-468)||(33246456-33246505)
chr4 (427-468)||(41459684-41459725)
chr4 (420-468)||(41919997-41920046)
chr4 (420-468)||(54359780-54359829)
chr4 (428-468)||(16070528-16070568)
chr4 (428-468)||(22750810-22750850)
chr4 (428-468)||(43800905-43800945)
chr4 (322-406)||(43800971-43801055)
chr4 (337-380)||(25477414-25477457)
chr4 (337-403)||(5536650-5536716)
chr4 (333-403)||(22651630-22651700)
chr4 (337-403)||(24072933-24072999)
chr4 (322-403)||(12624862-12624943)
chr4 (420-468)||(13096501-13096550)
chr4 (335-400)||(19654598-19654663)
chr4 (420-468)||(20262353-20262402)
chr4 (420-468)||(21171821-21171870)
chr4 (420-468)||(24072864-24072913)
chr4 (420-468)||(39414331-39414380)
chr4 (352-397)||(41945661-41945706)
chr4 (420-468)||(52198687-52198736)
chr4 (337-402)||(54438677-54438742)
chr4 (420-468)||(56217012-56217061)
[»] chr6 (18 HSPs)
chr6 (420-468)||(30248959-30249008)
chr6 (322-468)||(1763910-1764060)
chr6 (420-466)||(3887902-3887949)
chr6 (420-466)||(28238273-28238320)
chr6 (322-403)||(19839097-19839178)
chr6 (420-468)||(31945872-31945921)
chr6 (420-468)||(16186667-16186715)
chr6 (428-468)||(31039243-31039283)
chr6 (415-466)||(7365586-7365637)
chr6 (329-403)||(6791542-6791616)
chr6 (420-468)||(3729519-3729568)
chr6 (429-466)||(5191254-5191291)
chr6 (420-468)||(9461390-9461439)
chr6 (431-468)||(15981891-15981928)
chr6 (431-468)||(30465940-30465977)
chr6 (431-468)||(31536109-31536146)
chr6 (322-403)||(31945771-31945852)
chr6 (420-468)||(34513178-34513227)
[»] scaffold0038 (1 HSPs)
scaffold0038 (420-466)||(38435-38482)
[»] scaffold0012 (1 HSPs)
scaffold0012 (430-468)||(99787-99825)
[»] scaffold1091 (2 HSPs)
scaffold1091 (337-403)||(1786-1852)
scaffold1091 (420-468)||(1872-1921)
[»] scaffold0009 (1 HSPs)
scaffold0009 (420-465)||(25798-25844)
[»] scaffold0121 (1 HSPs)
scaffold0121 (420-468)||(24156-24205)


Alignment Details
Target: chr1 (Bit Score: 433; Significance: 0; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 433; E-Value: 0
Query Start/End: Original strand, 8 - 468
Target Start/End: Complemental strand, 2343460 - 2343000
Alignment:
Q  8 attataatttatacaatcgaagaaaatgtcaaattaaagtgaataaatgaaatattttataattattctatacattattattcagatttgaatttgaatt 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2343460 attataatttatacaatcgaagaaaatgtcaaattaaagtgaataaatgaaatattttataattattctatacattattattcagatttgaatttgaatt 2343361  T
Q  108 cataataaatgtaaaatgaggattcgagataactaaaacatactaaaccatggatgtaaatgacacgacttaaagtgcatatatgactttgatttccgtt 207  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2343360 cataataaatgtaaaatgaggattcgagataactaaaacataccaaaccatggatgtaaatgacacgacttaaagtgcatatatgactttgatttccgtt 2343261  T
Q  208 accatttgatgcaaatcttaattctacgagtaattcaaaattctttcttaaatttcgttttttgcatccatcgatcataattctaacaagaaactcatgt 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2343260 accatttgatgcaaatcttaattctacgagtaattcaaaattctttcttaaatttcgttttttgcatccatcgatcataattctaacaagaaactcatgt 2343161  T
Q  308 taattgtttgtaattactcactctgtccttatatctaggcactcatttgattttctttttatccctaaatgtaagtcccttttcaaattattagatacan 407  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  2343160 taattgtttgtaattactcactctgtccttatatctaggcactcatttgattttctttttatccctaaatgtaagtcccttttcaaattattagatacat 2343061  T
Q  408 nnnnnnncttcataaacataccctaattaatactactaacttgccttgaaatatgaaaagt 468  Q
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2343060 tttttttcttcataaacataccctaattaatactactaacttgccttgaaatatgaaaagt 2343000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 177; E-Value: 5e-95
Query Start/End: Original strand, 578 - 758
Target Start/End: Complemental strand, 2342891 - 2342711
Alignment:
Q  578 gggcttacacatagagacgagggagtatataagaaaaagttaatcttaacccatcaatcttatataaacttggtcctatttatgagaaaaattcaaaaaa 677  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2342891 gggcttacacatagagacgagggagtatataagaaaaagttaatcttaacccatcaatcttatataaacttggtcctatttatgagaaaaattcaaaaaa 2342792  T
Q  678 ttgatgggtatatttaatacccccttcggtccttattgatcctatttatgagaaaaattcaagaaatttatgggtatacta 758  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2342791 ttgatgggtatatttaatactcccttcggtccttattgatcctatttatgagaaaaattcaagaaatttatgggtatacta 2342711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 322 - 403
Target Start/End: Original strand, 5084946 - 5085027
Alignment:
Q  322 tactcactctgtccttatatctaggcactcatttgattttctttttatccctaaatgtaagtcccttttcaaattattagat 403  Q
    ||||| ||| |||| |||||||| |||| ||||||||||| ||||| |||||||||||||  |||||||||||||| |||||    
T  5084946 tactccctccgtccctatatctaagcacccatttgattttatttttgtccctaaatgtaaaccccttttcaaattactagat 5085027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 420 - 468
Target Start/End: Complemental strand, 3072282 - 3072233
Alignment:
Q  420 taaacatacc-ctaattaatactactaacttgccttgaaatatgaaaagt 468  Q
    |||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  3072282 taaacatacctctaattaatactactaacttgtcttgaaatatgaaaagt 3072233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 321 - 406
Target Start/End: Original strand, 5321878 - 5321963
Alignment:
Q  321 ttactcactctgtccttatatctaggcactcatttgattttctttttatccctaaatgtaagtcccttttcaaattattagataca 406  Q
    |||||| ||| |||| ||| ||||  ||| ||||||||||| ||||| |||||||||||||  |||||||||||||| ||||||||    
T  5321878 ttactccctccgtccctatgtctaaacacccatttgattttatttttgtccctaaatgtaaaccccttttcaaattactagataca 5321963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 429 - 468
Target Start/End: Original strand, 34028469 - 34028508
Alignment:
Q  429 cctaattaatactactaacttgccttgaaatatgaaaagt 468  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  34028469 cctaattaatactactaacttgccttggaatatgaaaagt 34028508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 332 - 403
Target Start/End: Complemental strand, 36085206 - 36085135
Alignment:
Q  332 gtccttatatctaggcactcatttgattttctttttatccctaaatgtaagtcccttttcaaattattagat 403  Q
    |||| |||||||| |||||||||| ||||| ||||| ||||||||||||| ||  ||||||||||| |||||    
T  36085206 gtccctatatctaagcactcatttaattttatttttgtccctaaatgtaaatcttttttcaaattactagat 36085135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 430 - 468
Target Start/End: Complemental strand, 20564909 - 20564871
Alignment:
Q  430 ctaattaatactactaacttgccttgaaatatgaaaagt 468  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  20564909 ctaattaatactactaacttgtcttgaaatatgaaaagt 20564871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 322 - 403
Target Start/End: Complemental strand, 3143650 - 3143569
Alignment:
Q  322 tactcactctgtccttatatctaggcactcatttgattttctttttatccctaaatgtaagtcccttttcaaattattagat 403  Q
    ||||| ||| |||| ||||| || |||| ||||||||||| ||||| ||||||||||||   ||||||||||||||| ||||    
T  3143650 tactctctccgtccctatatttaagcacccatttgattttatttttgtccctaaatgtacaccccttttcaaattatcagat 3143569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 322 - 403
Target Start/End: Original strand, 15512638 - 15512719
Alignment:
Q  322 tactcactctgtccttatatctaggcactcatttgattttctttttatccctaaatgtaagtcccttttcaaattattagat 403  Q
    ||||| ||| |||| ||||| || |||| ||||||||||| ||||| |||||||||||||   ||||||||||||| |||||    
T  15512638 tactccctccgtccctatatgtaagcacccatttgattttatttttgtccctaaatgtaaactccttttcaaattactagat 15512719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 420 - 468
Target Start/End: Original strand, 23982550 - 23982599
Alignment:
Q  420 taaacata-ccctaattaatactactaacttgccttgaaatatgaaaagt 468  Q
    |||||||| ||||||||||||||||||||||  |||||||||||||||||    
T  23982550 taaacatatccctaattaatactactaacttatcttgaaatatgaaaagt 23982599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 322 - 403
Target Start/End: Original strand, 28948821 - 28948902
Alignment:
Q  322 tactcactctgtccttatatctaggcactcatttgattttctttttatccctaaatgtaagtcccttttcaaattattagat 403  Q
    ||||| ||| |||| ||||| || |||| ||||||||||| ||||| |||||||||||||   ||||||||||||| |||||    
T  28948821 tactccctccgtccctatatgtaagcacccatttgattttatttttgtccctaaatgtaaactccttttcaaattactagat 28948902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 424 - 465
Target Start/End: Original strand, 31807935 - 31807976
Alignment:
Q  424 cataccctaattaatactactaacttgccttgaaatatgaaa 465  Q
    ||||||||||||||||||||||||||| ||||||||| ||||    
T  31807935 cataccctaattaatactactaacttgtcttgaaataggaaa 31807976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 322 - 403
Target Start/End: Complemental strand, 32716038 - 32715958
Alignment:
Q  322 tactcactctgtccttatatctaggcactcatttgattttctttttatccctaaatgtaagtcccttttcaaattattagat 403  Q
    ||||| ||| |||| |||||||| |||| ||||||||||| ||||| || ||||||||||  |||||||||||||| |||||    
T  32716038 tactccctccgtccctatatctaagcacccatttgattttatttttgtctctaaatgtaa-acccttttcaaattactagat 32715958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 420 - 468
Target Start/End: Complemental strand, 34012632 - 34012583
Alignment:
Q  420 taaacataccct-aattaatactactaacttgccttgaaatatgaaaagt 468  Q
    |||||||||||| |||||||||||||| |||| |||||||||||||||||    
T  34012632 taaacatacccttaattaatactactatcttgtcttgaaatatgaaaagt 34012583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 420 - 468
Target Start/End: Original strand, 44652819 - 44652868
Alignment:
Q  420 taaacataccc-taattaatactactaacttgccttgaaatatgaaaagt 468  Q
    ||||||||||| ||||||||||||||||||||  ||||||||||||||||    
T  44652819 taaacatacccctaattaatactactaacttgttttgaaatatgaaaagt 44652868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 422 - 466
Target Start/End: Original strand, 47070921 - 47070966
Alignment:
Q  422 aacatacc-ctaattaatactactaacttgccttgaaatatgaaaa 466  Q
    |||||||| ||||||||||||||||||||| |||||||||||||||    
T  47070921 aacatacctctaattaatactactaacttgtcttgaaatatgaaaa 47070966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 420 - 468
Target Start/End: Original strand, 48721826 - 48721875
Alignment:
Q  420 taaacataccc-taattaatactactaacttgccttgaaatatgaaaagt 468  Q
    ||||||||||| ||||||||||||||| |||| |||||||||||||||||    
T  48721826 taaacatacccctaattaatactactatcttgtcttgaaatatgaaaagt 48721875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 420 - 468
Target Start/End: Original strand, 51390495 - 51390544
Alignment:
Q  420 taaacataccct-aattaatactactaacttgccttgaaatatgaaaagt 468  Q
    |||||||||||| |||||| |||||||||||| |||||||||||||||||    
T  51390495 taaacatacccttaattaaaactactaacttgtcttgaaatatgaaaagt 51390544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 428 - 468
Target Start/End: Complemental strand, 3143539 - 3143499
Alignment:
Q  428 ccctaattaatactactaacttgccttgaaatatgaaaagt 468  Q
    |||||||||||||||||| |||| |||||||||||||||||    
T  3143539 ccctaattaatactactatcttgtcttgaaatatgaaaagt 3143499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 420 - 468
Target Start/End: Original strand, 8984620 - 8984668
Alignment:
Q  420 taaacataccctaattaatactactaacttgccttgaaatatgaaaagt 468  Q
    ||||| ||||||||||||||||||||| ||  |||||||||||||||||    
T  8984620 taaacttaccctaattaatactactaatttatcttgaaatatgaaaagt 8984668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 421 - 468
Target Start/End: Complemental strand, 47643684 - 47643636
Alignment:
Q  421 aaacataccct-aattaatactactaacttgccttgaaatatgaaaagt 468  Q
    ||||||||||| ||||||||||||||||||| |||||||| ||||||||    
T  47643684 aaacatacccttaattaatactactaacttgtcttgaaatttgaaaagt 47643636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 352 - 403
Target Start/End: Complemental strand, 3831263 - 3831212
Alignment:
Q  352 atttgattttctttttatccctaaatgtaagtcccttttcaaattattagat 403  Q
    |||||||||| ||||| |||||||||||||  |||||||||||||| |||||    
T  3831263 atttgattttatttttgtccctaaatgtaaaccccttttcaaattactagat 3831212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 420 - 466
Target Start/End: Complemental strand, 30336204 - 30336157
Alignment:
Q  420 taaacata-ccctaattaatactactaacttgccttgaaatatgaaaa 466  Q
    |||||||| ||||||||||||||||||||||  |||||||||||||||    
T  30336204 taaacatatccctaattaatactactaacttatcttgaaatatgaaaa 30336157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 322 - 397
Target Start/End: Complemental strand, 51997202 - 51997127
Alignment:
Q  322 tactcactctgtccttatatctaggcactcatttgattttctttttatccctaaatgtaagtcccttttcaaatta 397  Q
    ||||| |||||||| |  || ||| ||| ||||||||||| ||||| |||||||||||||  ||||||||||||||    
T  51997202 tactccctctgtcccttaatgtagccacccatttgattttatttttgtccctaaatgtaatccccttttcaaatta 51997127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 337 - 403
Target Start/End: Original strand, 34696755 - 34696821
Alignment:
Q  337 tatatctaggcactcatttgattttctttttatccctaaatgtaagtcccttttcaaattattagat 403  Q
    |||||||| |||  ||||||||||| ||||| | |||||||||||  |||||||||||||| |||||    
T  34696755 tatatctaagcatccatttgattttatttttgttcctaaatgtaaaccccttttcaaattactagat 34696821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 420 - 468
Target Start/End: Complemental strand, 3831192 - 3831143
Alignment:
Q  420 taaacata-ccctaattaatactactaacttgccttgaaatatgaaaagt 468  Q
    |||||||| |||||||||||||| ||| |||| |||||||||||||||||    
T  3831192 taaacatatccctaattaatacttctatcttgtcttgaaatatgaaaagt 3831143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 431 - 468
Target Start/End: Original strand, 4817876 - 4817913
Alignment:
Q  431 taattaatactactaacttgccttgaaatatgaaaagt 468  Q
    |||||||||||||||||||| |||||||| ||||||||    
T  4817876 taattaatactactaacttgtcttgaaatttgaaaagt 4817913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 431 - 468
Target Start/End: Original strand, 4829676 - 4829713
Alignment:
Q  431 taattaatactactaacttgccttgaaatatgaaaagt 468  Q
    |||||||||||||||||||| |||||||| ||||||||    
T  4829676 taattaatactactaacttgtcttgaaatttgaaaagt 4829713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 420 - 468
Target Start/End: Original strand, 5085047 - 5085096
Alignment:
Q  420 taaacataccc-taattaatactactaacttgccttgaaatatgaaaagt 468  Q
    ||||||||||| ||||||||||||||| |||  |||||||||||||||||    
T  5085047 taaacatacccctaattaatactactatcttctcttgaaatatgaaaagt 5085096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 420 - 468
Target Start/End: Original strand, 5321981 - 5322030
Alignment:
Q  420 taaacataccc-taattaatactactaacttgccttgaaatatgaaaagt 468  Q
    ||||||||||| || |||||||||||| |||| |||||||||||||||||    
T  5321981 taaacatacccctagttaatactactatcttgtcttgaaatatgaaaagt 5322030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 420 - 468
Target Start/End: Complemental strand, 15179555 - 15179506
Alignment:
Q  420 taaacata-ccctaattaatactactaacttgccttgaaatatgaaaagt 468  Q
    |||||||| ||||||||||| ||||||||||| ||||||||| |||||||    
T  15179555 taaacatatccctaattaatcctactaacttgtcttgaaatacgaaaagt 15179506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 420 - 468
Target Start/End: Complemental strand, 25063355 - 25063306
Alignment:
Q  420 taaacataccc-taattaatactactaacttgccttgaaatatgaaaagt 468  Q
    ||||||||||| |||||||| ||||||||||| | |||||||||||||||    
T  25063355 taaacatacccctaattaatcctactaacttgtcgtgaaatatgaaaagt 25063306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 364 - 401
Target Start/End: Complemental strand, 27531326 - 27531289
Alignment:
Q  364 ttttatccctaaatgtaagtcccttttcaaattattag 401  Q
    |||| ||||||||||||| |||||||||||||||||||    
T  27531326 ttttgtccctaaatgtaaatcccttttcaaattattag 27531289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 420 - 468
Target Start/End: Original strand, 29140612 - 29140661
Alignment:
Q  420 taaacataccc-taattaatactactaacttgccttgaaatatgaaaagt 468  Q
    ||||||||||| |||||||||| |||| |||| |||||||||||||||||    
T  29140612 taaacatacccctaattaataccactatcttgtcttgaaatatgaaaagt 29140661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 420 - 468
Target Start/End: Complemental strand, 32152303 - 32152254
Alignment:
Q  420 taaacataccc-taattaatactactaacttgccttgaaatatgaaaagt 468  Q
    ||||||||||| |||||||||||||||||||  ||| |||||||||||||    
T  32152303 taaacatacccctaattaatactactaacttatcttaaaatatgaaaagt 32152254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 420 - 468
Target Start/End: Complemental strand, 33231985 - 33231936
Alignment:
Q  420 taaacataccc-taattaatactactaacttgccttgaaatatgaaaagt 468  Q
    ||||||||||| |||||||||| |||| |||| |||||||||||||||||    
T  33231985 taaacatacccctaattaataccactatcttgtcttgaaatatgaaaagt 33231936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 420 - 468
Target Start/End: Original strand, 46732918 - 46732967
Alignment:
Q  420 taaacataccc-taattaatactactaacttgccttgaaatatgaaaagt 468  Q
    ||||||||||| |||||| ||||||||| ||| |||||||||||||||||    
T  46732918 taaacatacccctaattattactactaatttgtcttgaaatatgaaaagt 46732967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 381; Significance: 0; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 381; E-Value: 0
Query Start/End: Original strand, 8 - 468
Target Start/End: Complemental strand, 30318305 - 30317846
Alignment:
Q  8 attataatttatacaatcgaagaaaatgtcaaattaaagtgaataaatgaaatattttataattattctatacattattattcagatttgaatttgaatt 107  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  30318305 attataatttatacgatcgaagaaaatgtcaaattaaagtgaataaatgaaatattttataattattctacacattattattcaaatttgaatttgaatt 30318206  T
Q  108 cataataaatgtaaaatgaggattcgagataactaaaacatactaaaccatggatgtaaatgacacgacttaaagtgcatatatgactttgatttccgtt 207  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  30318205 cataataaatgtaaaatgaggactcgagataactaaaacatactaaaccatggatgtaaatgacacgacttagagtgcatatatgactttgatttccgtt 30318106  T
Q  208 accatttgatgcaaatcttaattctacgagtaattcaaaattctttcttaaatttcgttttttgcatccatcgatcataattctaacaagaaactcatgt 307  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  30318105 accatttgatgcaaatcttaattctatgagtaattcaaaattctttcttaaatttcgttttttgcatccatcgatcttaattctaacaagaaactcatgt 30318006  T
Q  308 taattgtttgtaattactcactctgtccttatatctaggcactcatttgattttctttttatccctaaatgtaagtcccttttcaaattattagatacan 407  Q
    ||||||||||||||||||||||| ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  30318005 taattgtttgtaattactcactccgtccttatatctaggtacccatttgattttctttttatccctaaatgtaagtcccttttcaaattattagatacat 30317906  T
Q  408 nnnnnnncttcataaacataccctaattaatactactaacttgccttgaaatatgaaaagt 468  Q
            ||||| |||||||||||||||||||||||||||||| ||||||||||||||||    
T  30317905 ttttttt-ttcattaacataccctaattaatactactaacttgcattgaaatatgaaaagt 30317846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 140; E-Value: 6e-73
Query Start/End: Original strand, 571 - 758
Target Start/End: Original strand, 30348187 - 30348370
Alignment:
Q  571 gcaaagagggcttacacatagagacga-gggagtatataagaaaaagttaatcttaacccatcaatcttatataaacttggtcctatttatgagaaaaat 669  Q
    ||||||||||||||||||||| ||||| ||||    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  30348187 gcaaagagggcttacacatagggacgaaggga----ataagaaaaagttaatcgtaacccatcaatcttatataaacttggtcctatttatgagaaaaat 30348282  T
Q  670 tcaaaaaattgatgggtatatttaatacccccttcggtccttattgatcctatttatgagaaaaattcaagaaatttatgggtatacta 758  Q
    ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  30348283 tcaaaaaattgatgggtatatttaata-ctccttcggtccttattgatcctatttatgaggaaaattcaagaaatttatgggtatacta 30348370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 311 - 468
Target Start/End: Original strand, 30347929 - 30348084
Alignment:
Q  311 ttgtttgtaattactcactctgtccttatatctaggcactcatttgattttctttttatccctaaatgtaagtcccttttcaaattattagatacannnn 410  Q
    ||||||||||||| |||||| ||||||||||||||  || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||        
T  30347929 ttgtttgtaattaatcactccgtccttatatctagatacccatttgattttctttttatccctaaatgtaagtcccttttcaaattattagatacatttt 30348028  T
Q  411 nnnncttcataaacataccctaattaatactactaacttgccttgaaatatgaaaagt 468  Q
         |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30348029 ttt--ttcataaacataccctaattaatactactaacttgccttgaaatatgaaaagt 30348084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 420 - 468
Target Start/End: Original strand, 5151159 - 5151207
Alignment:
Q  420 taaacataccctaattaatactactaacttgccttgaaatatgaaaagt 468  Q
    ||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  5151159 taaacataccctaattagtactactaacttgtcttgaaatatgaaaagt 5151207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 420 - 468
Target Start/End: Complemental strand, 29866335 - 29866286
Alignment:
Q  420 taaacataccc-taattaatactactaacttgccttgaaatatgaaaagt 468  Q
    ||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  29866335 taaacatacccctaattaatactactaacttgtcttgaaatatgaaaagt 29866286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 351 - 403
Target Start/End: Original strand, 9946243 - 9946295
Alignment:
Q  351 catttgattttctttttatccctaaatgtaagtcccttttcaaattattagat 403  Q
    ||||||||||| ||||| ||||||||||||| || ||||||||||||||||||    
T  9946243 catttgattttatttttgtccctaaatgtaattctcttttcaaattattagat 9946295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 332 - 403
Target Start/End: Original strand, 25690520 - 25690591
Alignment:
Q  332 gtccttatatctaggcactcatttgattttctttttatccctaaatgtaagtcccttttcaaattattagat 403  Q
    |||| |||||||| |||| ||||||||||| ||||| |||||||||||||  |||||||||| ||| |||||    
T  25690520 gtccctatatctaagcacccatttgattttatttttgtccctaaatgtaaaccccttttcaacttactagat 25690591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 420 - 468
Target Start/End: Complemental strand, 4738776 - 4738727
Alignment:
Q  420 taaacataccc-taattaatactactaacttgccttgaaatatgaaaagt 468  Q
    ||||||||||| ||| |||||||||||||||| |||||||||||||||||    
T  4738776 taaacatacccctaactaatactactaacttgtcttgaaatatgaaaagt 4738727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 420 - 468
Target Start/End: Complemental strand, 5845322 - 5845273
Alignment:
Q  420 taaacatac-cctaattaatactactaacttgccttgaaatatgaaaagt 468  Q
    ||||||||| ||||||||||||||||||||||  ||||||||||||||||    
T  5845322 taaacatactcctaattaatactactaacttgtattgaaatatgaaaagt 5845273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 322 - 403
Target Start/End: Complemental strand, 27925520 - 27925439
Alignment:
Q  322 tactcactctgtccttatatctaggcactcatttgattttctttttatccctaaatgtaagtcccttttcaaattattagat 403  Q
    ||||| ||| |||| | |||||| || | ||||||| ||| ||||| ||||||||||||| ||||||||||||||| |||||    
T  27925520 tactccctccgtccctgtatctaagcccccatttgactttatttttgtccctaaatgtaaatcccttttcaaattactagat 27925439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 322 - 403
Target Start/End: Complemental strand, 36177540 - 36177459
Alignment:
Q  322 tactcactctgtccttatatctaggcactcatttgattttctttttatccctaaatgtaagtcccttttcaaattattagat 403  Q
    ||||| ||| |||| |||||||| |||  ||||||||||| ||||| ||||||||||||| | | ||||||||||| |||||    
T  36177540 tactccctccgtccatatatctaagcatccatttgattttatttttgtccctaaatgtaaattcattttcaaattactagat 36177459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 322 - 403
Target Start/End: Original strand, 39690343 - 39690424
Alignment:
Q  322 tactcactctgtccttatatctaggcactcatttgattttctttttatccctaaatgtaagtcccttttcaaattattagat 403  Q
    ||||| ||| |||| ||||| || |||| ||||||||||| ||||| |||||||||||||   ||||||||||||| |||||    
T  39690343 tactccctccgtccctatatgtaagcacccatttgattttatttttgtccctaaatgtaaactccttttcaaattactagat 39690424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 420 - 468
Target Start/End: Complemental strand, 10656735 - 10656687
Alignment:
Q  420 taaacataccctaattaatactactaacttgccttgaaatatgaaaagt 468  Q
    |||||||||||||||||||||| |||||||   ||||||||||||||||    
T  10656735 taaacataccctaattaatactgctaacttatgttgaaatatgaaaagt 10656687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 420 - 467
Target Start/End: Original strand, 42644436 - 42644484
Alignment:
Q  420 taaacataccct-aattaatactactaacttgccttgaaatatgaaaag 467  Q
    |||||||||||| ||||||||| ||||||||| ||||||||||||||||    
T  42644436 taaacatacccttaattaatacaactaacttgtcttgaaatatgaaaag 42644484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 353 - 400
Target Start/End: Original strand, 3247160 - 3247207
Alignment:
Q  353 tttgattttctttttatccctaaatgtaagtcccttttcaaattatta 400  Q
    ||||||||| |||||||||| |||| ||| ||||||||||||||||||    
T  3247160 tttgattttatttttatccccaaatataaatcccttttcaaattatta 3247207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 353 - 396
Target Start/End: Original strand, 40979098 - 40979141
Alignment:
Q  353 tttgattttctttttatccctaaatgtaagtcccttttcaaatt 396  Q
    ||||||||| |||||||||||||||||||  |||||||||||||    
T  40979098 tttgattttatttttatccctaaatgtaaagcccttttcaaatt 40979141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 420 - 461
Target Start/End: Original strand, 10523232 - 10523274
Alignment:
Q  420 taaacataccc-taattaatactactaacttgccttgaaatat 461  Q
    ||||||||||| |||||||||||||||||||| ||||||||||    
T  10523232 taaacatacccctaattaatactactaacttgtcttgaaatat 10523274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 322 - 400
Target Start/End: Original strand, 25017528 - 25017606
Alignment:
Q  322 tactcactctgtccttatatctaggcactcatttgattttctttttatccctaaatgtaagtcccttttcaaattatta 400  Q
    ||||| ||| |||| |||||||| ||| |||||||| ||| ||||| ||| |||||||||  ||| |||||||||||||    
T  25017528 tactctctccgtccctatatctaagcattcatttgactttatttttgtccttaaatgtaaaccccctttcaaattatta 25017606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 420 - 468
Target Start/End: Original strand, 3558985 - 3559034
Alignment:
Q  420 taaacataccct-aattaatactactaacttgccttgaaatatgaaaagt 468  Q
    |||||||||||| ||| ||||||||||||||  |||||||||||||||||    
T  3558985 taaacatacccttaataaatactactaacttatcttgaaatatgaaaagt 3559034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 420 - 468
Target Start/End: Original strand, 4857452 - 4857501
Alignment:
Q  420 taaacatac-cctaattaatactactaacttgccttgaaatatgaaaagt 468  Q
    ||||||||| |||||||||||||||||||||  ||| |||||||||||||    
T  4857452 taaacatactcctaattaatactactaacttatcttaaaatatgaaaagt 4857501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 416 - 468
Target Start/End: Original strand, 5764177 - 5764230
Alignment:
Q  416 ttcataaacatacc-ctaattaatactactaacttgccttgaaatatgaaaagt 468  Q
    |||||||||||||| |||||||||| || ||||||| | |||||||||||||||    
T  5764177 ttcataaacatacctctaattaatattattaacttgtcgtgaaatatgaaaagt 5764230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 420 - 468
Target Start/End: Complemental strand, 7736126 - 7736077
Alignment:
Q  420 taaacata-ccctaattaatactactaacttgccttgaaatatgaaaagt 468  Q
    |||||||| |||||||||||||| |||||||  |||||||||||||||||    
T  7736126 taaacatatccctaattaatactgctaacttatcttgaaatatgaaaagt 7736077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 420 - 468
Target Start/End: Original strand, 8717917 - 8717966
Alignment:
Q  420 taaacataccc-taattaatactactaacttgccttgaaatatgaaaagt 468  Q
    ||||||||||| ||||||||| ||| |||||| |||||||||||||||||    
T  8717917 taaacatacccctaattaataatacgaacttgtcttgaaatatgaaaagt 8717966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 420 - 468
Target Start/End: Original strand, 9946316 - 9946365
Alignment:
Q  420 taaacataccc-taattaatactactaacttgccttgaaatatgaaaagt 468  Q
    ||||||||||| ||||||||||||||| |||| |||||||||| ||||||    
T  9946316 taaacatacccctaattaatactactatcttgtcttgaaatataaaaagt 9946365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 420 - 468
Target Start/End: Complemental strand, 20946233 - 20946184
Alignment:
Q  420 taaacatac-cctaattaatactactaacttgccttgaaatatgaaaagt 468  Q
    ||||||||| |||||||| |||||||||||||  ||||||||||||||||    
T  20946233 taaacatactcctaattagtactactaacttgttttgaaatatgaaaagt 20946184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 322 - 403
Target Start/End: Complemental strand, 27642749 - 27642668
Alignment:
Q  322 tactcactctgtccttatatctaggcactcatttgattttctttttatccctaaatgtaagtcccttttcaaattattagat 403  Q
    ||||| ||| |||| ||||| || |||||||||||||||| ||||| ||| ||||| |||   ||||||||||||| |||||    
T  27642749 tactccctccgtccctatatgtaagcactcatttgattttatttttgtccataaatataaactccttttcaaattactagat 27642668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 322 - 403
Target Start/End: Original strand, 31641047 - 31641128
Alignment:
Q  322 tactcactctgtccttatatctaggcactcatttgattttctttttatccctaaatgtaagtcccttttcaaattattagat 403  Q
    ||||| ||| |||||||||| ||  ||||| ||||| ||| ||||| ||||||||| ||| || |||||||||||| |||||    
T  31641047 tactccctccgtccttatatgtaaacactcgtttgactttatttttgtccctaaatttaaatctcttttcaaattactagat 31641128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 420 - 468
Target Start/End: Original strand, 35568963 - 35569012
Alignment:
Q  420 taaacataccc-taattaatactactaacttgccttgaaatatgaaaagt 468  Q
    ||||||||||| |||||| ||||||||| ||| |||||||||||||||||    
T  35568963 taaacatacccctaattagtactactaatttgtcttgaaatatgaaaagt 35569012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 420 - 468
Target Start/End: Original strand, 38972085 - 38972134
Alignment:
Q  420 taaacataccct-aattaatactactaacttgccttgaaatatgaaaagt 468  Q
    |||||||||||| ||||||||||||||||||  |||||||||| ||||||    
T  38972085 taaacatacccttaattaatactactaacttatcttgaaatataaaaagt 38972134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 420 - 468
Target Start/End: Original strand, 40979170 - 40979219
Alignment:
Q  420 taaacataccc-taattaatactactaacttgccttgaaatatgaaaagt 468  Q
    ||||||||||| ||||||||||||||| |||| ||| |||||||||||||    
T  40979170 taaacatacccctaattaatactactatcttgtctttaaatatgaaaagt 40979219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 420 - 465
Target Start/End: Original strand, 43060470 - 43060515
Alignment:
Q  420 taaacataccctaattaatactactaacttgccttgaaatatgaaa 465  Q
    |||||||| || ||||||||||||||||||| |||| |||||||||    
T  43060470 taaacatatccgaattaatactactaacttgtcttggaatatgaaa 43060515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 217; Significance: 1e-119; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 8 - 240
Target Start/End: Complemental strand, 3645911 - 3645679
Alignment:
Q  8 attataatttatacaatcgaagaaaatgtcaaattaaagtgaataaatgaaatattttataattattctatacattattattcagatttgaatttgaatt 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3645911 attataatttatacaatcgaagaaaatgtcaaattaaagtgaataaatgaaatattttataattattctatacattattattcagatttgaatttgaatt 3645812  T
Q  108 cataataaatgtaaaatgaggattcgagataactaaaacatactaaaccatggatgtaaatgacacgacttaaagtgcatatatgactttgatttccgtt 207  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3645811 cataataaatttaaaatgaggactcgagataactaaaacatactaaactatggatgtaaatgacacgacttaaagtgcatatatgactttgatttccgtt 3645712  T
Q  208 accatttgatgcaaatcttaattctacgagtaa 240  Q
    |||||||||||||||||||||||||| ||||||    
T  3645711 accatttgatgcaaatcttaattctatgagtaa 3645679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 228 - 468
Target Start/End: Complemental strand, 3645660 - 3645420
Alignment:
Q  228 attctacgagtaattcaaaattctttcttaaatttcgttttttgcatccatcgatcataattctaacaagaaactcatgttaattgtttgtaattactca 327  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  3645660 attctatgagtaattcaaaattctttcttaaatttcgttttttgcatccatcgatcttaattctaacaagaaactcatgttaattgtttgtaattactca 3645561  T
Q  328 ctctgtccttatatctaggcactcatttgattttctttttatccctaaatgtaagtcccttttcaaattattagatacannnnnnnncttcataaacata 427  Q
    ||| ||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||    
T  3645560 ctccgtccttatatctaagcacccatttgattttctttttatccctaaatgtaagtcccttttcaaattattagatacattttttttcttcataaacata 3645461  T
Q  428 ccctaattaatactactaacttgccttgaaatatgaaaagt 468  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  3645460 ccctaattaatactactaacttgccttgaaatatgaaaagt 3645420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 157; E-Value: 4e-83
Query Start/End: Original strand, 571 - 758
Target Start/End: Complemental strand, 3645317 - 3645129
Alignment:
Q  571 gcaaagagggcttacacatagagac-gagggagtatataagaaaaagttaatcttaacccatcaatcttatataaacttggtcctatttatgagaaaaat 669  Q
    ||||||||| ||||||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  3645317 gcaaagaggacttacacatagggacagagggagtatttaagaaaaagttaatcttaacccatcaatcttatataaacttggtcatatttatgagaaaaat 3645218  T
Q  670 tcaaaaaattgatgggtatatttaatacccccttcggtccttattgatcctatttatgagaaaaattcaagaaatttatgggtatacta 758  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  3645217 tcaaaaaattgatgggtatatttaatactcccttcggtccttattgatcctatttatgaggaaaattcaagaaatttatgggtatacta 3645129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 321 - 403
Target Start/End: Original strand, 31644300 - 31644382
Alignment:
Q  321 ttactcactctgtccttatatctaggcactcatttgattttctttttatccctaaatgtaagtcccttttcaaattattagat 403  Q
    |||||||||||||||||||||||| |||| ||||||||||| ||||| |||||||||||||   | ||||||||||| |||||    
T  31644300 ttactcactctgtccttatatctaagcacccatttgattttatttttgtccctaaatgtaaactcattttcaaattactagat 31644382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 332 - 403
Target Start/End: Original strand, 7278481 - 7278552
Alignment:
Q  332 gtccttatatctaggcactcatttgattttctttttatccctaaatgtaagtcccttttcaaattattagat 403  Q
    |||| |||||||| ||||  |||||||||| |||||||| |||||||||| ||||||||||||||| |||||    
T  7278481 gtccatatatctaagcaccaatttgattttatttttatctctaaatgtaaatcccttttcaaattactagat 7278552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 415 - 468
Target Start/End: Original strand, 40346035 - 40346089
Alignment:
Q  415 cttcataaacataccc-taattaatactactaacttgccttgaaatatgaaaagt 468  Q
    |||| ||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  40346035 cttcctaaacatacccctaattaatactacaaacttgccttgaaatatgaaaagt 40346089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 336 - 468
Target Start/End: Complemental strand, 44424826 - 44424692
Alignment:
Q  336 ttatatctaggcactcatttgattttctttttatccctaaatgtaagtcccttttcaaattattagatacannnnnnnnctt-cataaacataccc-taa 433  Q
    ||||||||| |||  ||||||||||| ||||| |||||||||||||  || ||||||||||| ||||| ||         || | ||||||||||| |||    
T  44424826 ttatatctaagcatccatttgattttatttttgtccctaaatgtaaaccctttttcaaattactagatgcatttattttttttcctaaacatacccctaa 44424727  T
Q  434 ttaatactactaacttgccttgaaatatgaaaagt 468  Q
    |||||||||||| |||| |||||||||||||||||    
T  44424726 ttaatactactatcttgtcttgaaatatgaaaagt 44424692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 420 - 468
Target Start/End: Complemental strand, 13534551 - 13534502
Alignment:
Q  420 taaacata-ccctaattaatactactaacttgccttgaaatatgaaaagt 468  Q
    |||||||| ||||||||||||||||||||||| |||||||||||||||||    
T  13534551 taaacatatccctaattaatactactaacttgtcttgaaatatgaaaagt 13534502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 318 - 403
Target Start/End: Complemental strand, 17663875 - 17663790
Alignment:
Q  318 taattactcactctgtccttatatctaggcactcatttgattttctttttatccctaaatgtaagtcccttttcaaattattagat 403  Q
    ||||||||| ||| |||| ||||| || |||| ||||||||||| ||||| |||||||||||||   ||||||||||||| |||||    
T  17663875 taattactccctccgtccctatatgtaagcacccatttgattttatttttgtccctaaatgtaaactccttttcaaattactagat 17663790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 318 - 403
Target Start/End: Complemental strand, 20362233 - 20362148
Alignment:
Q  318 taattactcactctgtccttatatctaggcactcatttgattttctttttatccctaaatgtaagtcccttttcaaattattagat 403  Q
    ||||||||| ||| |||| ||||| || |||| ||||||||||| ||||| |||||||||||||   ||||||||||||| |||||    
T  20362233 taattactccctccgtccctatatgtaagcacccatttgattttatttttgtccctaaatgtaaactccttttcaaattactagat 20362148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 332 - 397
Target Start/End: Complemental strand, 27749704 - 27749639
Alignment:
Q  332 gtccttatatctaggcactcatttgattttctttttatccctaaatgtaagtcccttttcaaatta 397  Q
    ||||||||||||| |||| ||||||||||| ||||| |||||||||||||   |||||||||||||    
T  27749704 gtccttatatctaagcacccatttgattttatttttgtccctaaatgtaaactccttttcaaatta 27749639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 322 - 406
Target Start/End: Complemental strand, 45214972 - 45214888
Alignment:
Q  322 tactcactctgtccttatatctaggcactcatttgattttctttttatccctaaatgtaagtcccttttcaaattattagataca 406  Q
    ||||| |||||||||||||| || |||||||||||| ||| ||||  || |||||||||  |||| |||||||||| ||||||||    
T  45214972 tactccctctgtccttatatttacgcactcatttgactttattttcttctctaaatgtatatcccatttcaaattactagataca 45214888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 420 - 466
Target Start/End: Original strand, 8065031 - 8065078
Alignment:
Q  420 taaacataccc-taattaatactactaacttgccttgaaatatgaaaa 466  Q
    ||||||||||| |||||||||||||||||||| |||||||||||||||    
T  8065031 taaacatacccctaattaatactactaacttgtcttgaaatatgaaaa 8065078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 332 - 403
Target Start/End: Complemental strand, 41865952 - 41865881
Alignment:
Q  332 gtccttatatctaggcactcatttgattttctttttatccctaaatgtaagtcccttttcaaattattagat 403  Q
    |||| ||||| || |||||||||||||||| ||||| | |||||||||||   |||||||||||||||||||    
T  41865952 gtccctatatttaagcactcatttgattttatttttgttcctaaatgtaaacaccttttcaaattattagat 41865881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 329 - 403
Target Start/End: Complemental strand, 37355277 - 37355203
Alignment:
Q  329 tctgtccttatatctaggcactcatttgattttctttttatccctaaatgtaagtcccttttcaaattattagat 403  Q
    ||||||| |||||||| |||| ||||||||||| ||||| || |||||| |||  |||||||||||||| |||||    
T  37355277 tctgtccctatatctaagcacccatttgattttatttttgtctctaaatataaaccccttttcaaattactagat 37355203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 321 - 403
Target Start/End: Original strand, 41327661 - 41327743
Alignment:
Q  321 ttactcactctgtccttatatctaggcactcatttgattttctttttatccctaaatgtaagtcccttttcaaattattagat 403  Q
    |||||| ||| |||| |||||||| |||| ||||||| ||| ||||| ||| ||||||||| || |||||||||||| |||||    
T  41327661 ttactccctccgtccatatatctaagcacccatttgactttatttttgtccataaatgtaaatctcttttcaaattactagat 41327743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 420 - 468
Target Start/End: Complemental strand, 3237869 - 3237820
Alignment:
Q  420 taaacata-ccctaattaatactactaacttgccttgaaatatgaaaagt 468  Q
    |||||||| |||||||||||||||||| |||| |||||||||||||||||    
T  3237869 taaacatatccctaattaatactactatcttgtcttgaaatatgaaaagt 3237820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 420 - 468
Target Start/End: Complemental strand, 7255747 - 7255698
Alignment:
Q  420 taaacata-ccctaattaatactactaacttgccttgaaatatgaaaagt 468  Q
    |||||||| ||||||||||||||||||| ||| |||||||||||||||||    
T  7255747 taaacatatccctaattaatactactaatttgtcttgaaatatgaaaagt 7255698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 420 - 468
Target Start/End: Complemental strand, 27297723 - 27297674
Alignment:
Q  420 taaacata-ccctaattaatactactaacttgccttgaaatatgaaaagt 468  Q
    |||||||| |||||||||||||||||| |||| |||||||||||||||||    
T  27297723 taaacatatccctaattaatactactatcttgtcttgaaatatgaaaagt 27297674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 431 - 468
Target Start/End: Original strand, 35178764 - 35178801
Alignment:
Q  431 taattaatactactaacttgccttgaaatatgaaaagt 468  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  35178764 taattaatactactatcttgccttgaaatatgaaaagt 35178801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 321 - 406
Target Start/End: Original strand, 40345933 - 40346018
Alignment:
Q  321 ttactcactctgtccttatatctaggcactcatttgattttctttttatccctaaatgtaagtcccttttcaaattattagataca 406  Q
    |||||| ||| |||| ||||||||  ||||||||| ||||| ||||| | |||||||||||   ||||||||||||| ||||||||    
T  40345933 ttactctctccgtccctatatctaaacactcattttattttatttttgttcctaaatgtaaactccttttcaaattactagataca 40346018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 420 - 468
Target Start/End: Complemental strand, 41665856 - 41665807
Alignment:
Q  420 taaacataccc-taattaatactactaacttgccttgaaatatgaaaagt 468  Q
    ||||||||||| |||||||||||| ||||||| |||||||||||||||||    
T  41665856 taaacatacccctaattaatactattaacttgtcttgaaatatgaaaagt 41665807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 428 - 468
Target Start/End: Complemental strand, 23464820 - 23464780
Alignment:
Q  428 ccctaattaatactactaacttgccttgaaatatgaaaagt 468  Q
    |||||||||||||||||||||||  ||||||||||||||||    
T  23464820 ccctaattaatactactaacttgttttgaaatatgaaaagt 23464780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 319 - 403
Target Start/End: Original strand, 38449569 - 38449653
Alignment:
Q  319 aattactcactctgtccttatatctaggcactcatttgattttctttttatccctaaatgtaagtcccttttcaaattattagat 403  Q
    |||||||| | | |||| ||||| || |||||||||||| ||| ||||||| |||||||||||  |||||||||| ||| |||||    
T  38449569 aattactcccgccgtccctatatataagcactcatttgactttatttttattcctaaatgtaaaccccttttcaacttactagat 38449653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 322 - 406
Target Start/End: Original strand, 45150600 - 45150684
Alignment:
Q  322 tactcactctgtccttatatctaggcactcatttgattttctttttatccctaaatgtaagtcccttttcaaattattagataca 406  Q
    ||||| ||| |||| ||||| ||  ||||||||||||||| ||||| |||||||||||||   ||||||||||||  ||||||||    
T  45150600 tactccctccgtccctatatttaatcactcatttgattttatttttgtccctaaatgtaaactccttttcaaattgctagataca 45150684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 420 - 466
Target Start/End: Original strand, 25731145 - 25731192
Alignment:
Q  420 taaacataccc-taattaatactactaacttgccttgaaatatgaaaa 466  Q
    ||||||||||| |||||||||||||||||||| ||| |||||||||||    
T  25731145 taaacatacccctaattaatactactaacttgtcttaaaatatgaaaa 25731192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 420 - 466
Target Start/End: Complemental strand, 32677621 - 32677574
Alignment:
Q  420 taaacataccc-taattaatactactaacttgccttgaaatatgaaaa 466  Q
    ||||||||||| |||||||||||||||| ||| |||||||||||||||    
T  32677621 taaacatacccctaattaatactactaatttgtcttgaaatatgaaaa 32677574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 415 - 468
Target Start/End: Complemental strand, 2131908 - 2131854
Alignment:
Q  415 cttcataaacataccc-taattaatactactaacttgccttgaaatatgaaaagt 468  Q
    |||| ||||||||||| |||||||||| ||||||||| ||| |||||||||||||    
T  2131908 cttcttaaacatacccctaattaatacaactaacttgtctttaaatatgaaaagt 2131854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 428 - 466
Target Start/End: Original strand, 16808791 - 16808829
Alignment:
Q  428 ccctaattaatactactaacttgccttgaaatatgaaaa 466  Q
    |||||||| |||||||||||||| |||||||||||||||    
T  16808791 ccctaatttatactactaacttgtcttgaaatatgaaaa 16808829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 428 - 466
Target Start/End: Original strand, 16848072 - 16848110
Alignment:
Q  428 ccctaattaatactactaacttgccttgaaatatgaaaa 466  Q
    |||||||| |||||||||||||| |||||||||||||||    
T  16848072 ccctaatttatactactaacttgtcttgaaatatgaaaa 16848110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 322 - 403
Target Start/End: Complemental strand, 247907 - 247826
Alignment:
Q  322 tactcactctgtccttatatctaggcactcatttgattttctttttatccctaaatgtaagtcccttttcaaattattagat 403  Q
    ||||| ||| |||| |||||||| |||| ||||||| |||  ||||||| ||||||||||   ||||||||||||| |||||    
T  247907 tactccctccgtccctatatctaagcacccatttgactttagttttatctctaaatgtaaactccttttcaaattagtagat 247826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 420 - 468
Target Start/End: Original strand, 2048789 - 2048838
Alignment:
Q  420 taaacataccc-taattaatactactaacttgccttgaaatatgaaaagt 468  Q
    ||||||||||| |||| ||||||||||||||| |||||||||| ||||||    
T  2048789 taaacatacccctaataaatactactaacttgtcttgaaatataaaaagt 2048838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 420 - 460
Target Start/End: Original strand, 9718131 - 9718172
Alignment:
Q  420 taaacataccct-aattaatactactaacttgccttgaaata 460  Q
    |||||||||||| ||||||||||||||||||| |||||||||    
T  9718131 taaacatacccttaattaatactactaacttgtcttgaaata 9718172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 431 - 468
Target Start/End: Original strand, 17250932 - 17250969
Alignment:
Q  431 taattaatactactaacttgccttgaaatatgaaaagt 468  Q
    ||||||||||||||| |||| |||||||||||||||||    
T  17250932 taattaatactactatcttgtcttgaaatatgaaaagt 17250969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 319 - 404
Target Start/End: Complemental strand, 24775115 - 24775030
Alignment:
Q  319 aattactcactctgtccttatatctaggcactcatttgattttctttttatccctaaatgtaagtcccttttcaaattattagata 404  Q
    |||||||| ||| |||| ||||| || |||  ||||||||||| ||||| ||||||||| ||| || |||||| ||||| ||||||    
T  24775115 aattactctctccgtccctatatttaagcatccatttgattttatttttgtccctaaatttaaatctcttttcgaattactagata 24775030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 420 - 468
Target Start/End: Complemental strand, 34330148 - 34330099
Alignment:
Q  420 taaacata-ccctaattaatactactaacttgccttgaaatatgaaaagt 468  Q
    |||||||| |||| ||||||||||||| |||| |||||||||||||||||    
T  34330148 taaacatatccctgattaatactactatcttgtcttgaaatatgaaaagt 34330099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 420 - 468
Target Start/End: Original strand, 44274478 - 44274527
Alignment:
Q  420 taaacataccc-taattaatactactaacttgccttgaaatatgaaaagt 468  Q
    ||||||||||| |||||||||| ||||||||| |||||||| ||||||||    
T  44274478 taaacatacccctaattaataccactaacttgtcttgaaatttgaaaagt 44274527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 53; Significance: 5e-21; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 319 - 403
Target Start/End: Complemental strand, 10685334 - 10685250
Alignment:
Q  319 aattactcactctgtccttatatctaggcactcatttgattttctttttatccctaaatgtaagtcccttttcaaattattagat 403  Q
    |||||||| ||| ||||||||||||| |||||||||||||||| ||||| |||||||||||||  |||||||||||||| |||||    
T  10685334 aattactccctccgtccttatatctaagcactcatttgattttatttttgtccctaaatgtaaaccccttttcaaattactagat 10685250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 328 - 403
Target Start/End: Original strand, 29635905 - 29635980
Alignment:
Q  328 ctctgtccttatatctaggcactcatttgattttctttttatccctaaatgtaagtcccttttcaaattattagat 403  Q
    ||||||||||||||||| |||| ||| ||| ||| ||||| ||||||||||||| ||| |||||||||||||||||    
T  29635905 ctctgtccttatatctaagcacccatgtgactttatttttgtccctaaatgtaaatccattttcaaattattagat 29635980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 322 - 468
Target Start/End: Original strand, 2276437 - 2276585
Alignment:
Q  322 tactcactctgtccttatatctaggcactcatttgattttctttttatccctaaatgtaagtcccttttcaaattattagataca-nnnnnnnncttcat 420  Q
    ||||| ||| |||| ||||| || |||| ||||||||||| ||||| ||||||||||||| || |||||||||||| |||| |||         |||| |    
T  2276437 tactccctccgtccctatatataagcacccatttgattttatttttgtccctaaatgtaaatcgcttttcaaattactagacacatttttttttcttcct 2276536  T
Q  421 aaacataccc-taattaatactactaacttgccttgaaatatgaaaagt 468  Q
    |||||||||| |||||||||||| ||||||  |||||||| ||||||||    
T  2276537 aaacatacccttaattaatactagtaacttatcttgaaatttgaaaagt 2276585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 416 - 466
Target Start/End: Original strand, 10408523 - 10408574
Alignment:
Q  416 ttcataaacataccc-taattaatactactaacttgccttgaaatatgaaaa 466  Q
    ||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  10408523 ttcataaacatacccctaattaatactactaacttgcattgaaatatgaaaa 10408574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 322 - 468
Target Start/End: Complemental strand, 1324954 - 1324805
Alignment:
Q  322 tactcactctgtccttatatctaggcactcatttgattttctttttatccctaaatgtaagtcccttttcaaattattagatacannnnnnnnctt--ca 419  Q
    ||||| |||||||| |||||||| || | ||||| ||||| ||||| |||||||||||||  ||| |||||||||| |||||  |         ||  |     
T  1324954 tactccctctgtccctatatctaagcccccattttattttatttttgtccctaaatgtaaaccccctttcaaattactagatgaatttattattttttcc 1324855  T
Q  420 taaacataccc-taattaatactactaacttgccttgaaatatgaaaagt 468  Q
    ||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  1324854 taaacatacccctaattaatactactaacttgtcttgaaatatgaaaagt 1324805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 332 - 466
Target Start/End: Original strand, 19235933 - 19236073
Alignment:
Q  332 gtccttatatctaggcactcatttgattttctttttatccctaaatgtaagtcccttttcaaattattagataca-----nnnnnnnncttcataaacat 426  Q
    |||| |||||||| |||||||||||| ||| ||||| |||||||||||||   ||||||||||||| ||||| ||              ||| |||||||    
T  19235933 gtccctatatctaagcactcatttgactttatttttgtccctaaatgtaaactccttttcaaattactagatgcatttatttatttattttcctaaacat 19236032  T
Q  427 a-ccctaattaatactactaacttgccttgaaatatgaaaa 466  Q
    | ||||||||||||||||||||||| |||||||||||||||    
T  19236033 acccctaattaatactactaacttgtcttgaaatatgaaaa 19236073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 335 - 403
Target Start/End: Complemental strand, 35128619 - 35128551
Alignment:
Q  335 cttatatctaggcactcatttgattttctttttatccctaaatgtaagtcccttttcaaattattagat 403  Q
    ||||||| || |||||||||||||||| ||||| |||||||||||||  | |||||||||||| |||||    
T  35128619 cttatatttaagcactcatttgattttatttttgtccctaaatgtaaacctcttttcaaattactagat 35128551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 420 - 464
Target Start/End: Complemental strand, 37048180 - 37048136
Alignment:
Q  420 taaacataccctaattaatactactaacttgccttgaaatatgaa 464  Q
    |||||||||||||||||||||||||||||||  ||||||||||||    
T  37048180 taaacataccctaattaatactactaacttgtattgaaatatgaa 37048136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 320 - 403
Target Start/End: Complemental strand, 48767814 - 48767731
Alignment:
Q  320 attactcactctgtccttatatctaggcactcatttgattttctttttatccctaaatgtaagtcccttttcaaattattagat 403  Q
    ||||||| ||| |||| |||||||| || | ||||||||||| ||||| |||||||||||||  ||| |||||||||| |||||    
T  48767814 attactccctccgtccctatatctaagcccccatttgattttatttttgtccctaaatgtaaaccccctttcaaattactagat 48767731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 322 - 404
Target Start/End: Complemental strand, 40263958 - 40263877
Alignment:
Q  322 tactcactctgtccttatatctaggcactcatttgattttctttttatccctaaatgtaagtcccttttcaaattattagata 404  Q
    ||||| |||| |||||||| ||| |||| ||| ||||||| |||||||||||||||| || || ||||| |||||||||||||    
T  40263958 tactccctctatccttataactaagcac-catctgattttatttttatccctaaatgcaaatcactttttaaattattagata 40263877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 420 - 468
Target Start/End: Original strand, 4089459 - 4089508
Alignment:
Q  420 taaacataccc-taattaatactactaacttgccttgaaatatgaaaagt 468  Q
    ||||||||||| ||||||||||||||| |||| |||||||||||||||||    
T  4089459 taaacatacccctaattaatactactatcttgtcttgaaatatgaaaagt 4089508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 420 - 468
Target Start/End: Original strand, 21809606 - 21809655
Alignment:
Q  420 taaacataccc-taattaatactactaacttgccttgaaatatgaaaagt 468  Q
    ||||||||||| ||||||||||||||||||||  ||||||||||||||||    
T  21809606 taaacatacccctaattaatactactaacttgttttgaaatatgaaaagt 21809655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 416 - 468
Target Start/End: Complemental strand, 40263861 - 40263808
Alignment:
Q  416 ttcataaacata-ccctaattaatactactaacttgccttgaaatatgaaaagt 468  Q
    |||||||||||| |||||||||||||||||| |||  |||||||||||||||||    
T  40263861 ttcataaacatagccctaattaatactactatcttatcttgaaatatgaaaagt 40263808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 431 - 468
Target Start/End: Original strand, 42983585 - 42983622
Alignment:
Q  431 taattaatactactaacttgccttgaaatatgaaaagt 468  Q
    |||||||||||||||||||| |||||||||||||||||    
T  42983585 taattaatactactaacttgtcttgaaatatgaaaagt 42983622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 428 - 468
Target Start/End: Original strand, 13907711 - 13907751
Alignment:
Q  428 ccctaattaatactactaacttgccttgaaatatgaaaagt 468  Q
    ||||||||||||||||||||||| ||| |||||||||||||    
T  13907711 ccctaattaatactactaacttgtctttaaatatgaaaagt 13907751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 420 - 468
Target Start/End: Original strand, 46783801 - 46783849
Alignment:
Q  420 taaacataccctaattaatactactaacttgccttgaaatatgaaaagt 468  Q
    ||||||| | ||||||||||||||||||||  |||||||||||||||||    
T  46783801 taaacatgctctaattaatactactaacttatcttgaaatatgaaaagt 46783849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 430 - 468
Target Start/End: Original strand, 18122012 - 18122050
Alignment:
Q  430 ctaattaatactactaacttgccttgaaatatgaaaagt 468  Q
    ||||||||||||||||||||  |||||||||||||||||    
T  18122012 ctaattaatactactaacttatcttgaaatatgaaaagt 18122050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 320 - 381
Target Start/End: Original strand, 4089357 - 4089418
Alignment:
Q  320 attactcactctgtccttatatctaggcactcatttgattttctttttatccctaaatgtaa 381  Q
    ||||||| ||| |||| ||||||||  ||| ||||||||||| ||||| |||||||||||||    
T  4089357 attactccctccgtccctatatctaaacacccatttgattttatttttgtccctaaatgtaa 4089418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 431 - 468
Target Start/End: Complemental strand, 8318689 - 8318652
Alignment:
Q  431 taattaatactactaacttgccttgaaatatgaaaagt 468  Q
    |||||||||||| ||||||| |||||||||||||||||    
T  8318689 taattaatactattaacttgtcttgaaatatgaaaagt 8318652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 322 - 379
Target Start/End: Complemental strand, 20124419 - 20124362
Alignment:
Q  322 tactcactctgtccttatatctaggcactcatttgattttctttttatccctaaatgt 379  Q
    ||||| ||| |||| ||||| || |||||||||||||||| ||||| |||||||||||    
T  20124419 tactccctccgtccctatatttaagcactcatttgattttatttttgtccctaaatgt 20124362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 416 - 468
Target Start/End: Complemental strand, 27170161 - 27170108
Alignment:
Q  416 ttcataaacataccc-taattaatactactaacttgccttgaaatatgaaaagt 468  Q
    ||||||||||||| | |||||||||||| ||| ||| |||||||||||||||||    
T  27170161 ttcataaacatactcataattaatactattaatttgtcttgaaatatgaaaagt 27170108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 431 - 468
Target Start/End: Original strand, 28038859 - 28038896
Alignment:
Q  431 taattaatactactaacttgccttgaaatatgaaaagt 468  Q
    ||||||||||| |||||||| |||||||||||||||||    
T  28038859 taattaatactgctaacttgtcttgaaatatgaaaagt 28038896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 420 - 468
Target Start/End: Original strand, 37491578 - 37491627
Alignment:
Q  420 taaacataccc-taattaatactactaacttgccttgaaatatgaaaagt 468  Q
    ||||||||||| ||||||||| ||| || |||||||||||||||||||||    
T  37491578 taaacatacccctaattaatattacaaatttgccttgaaatatgaaaagt 37491627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 427 - 468
Target Start/End: Original strand, 39102746 - 39102787
Alignment:
Q  427 accctaattaatactactaacttgccttgaaatatgaaaagt 468  Q
    |||||||||||||||||||||||| |||| ||||| ||||||    
T  39102746 accctaattaatactactaacttgtcttggaatataaaaagt 39102787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 420 - 468
Target Start/End: Complemental strand, 40741098 - 40741049
Alignment:
Q  420 taaacataccc-taattaatactactaacttgccttgaaatatgaaaagt 468  Q
    ||||||||||| ||||||||||| |||||||  |||||||||||||||||    
T  40741098 taaacatacccctaattaatactgctaacttatcttgaaatatgaaaagt 40741049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 420 - 468
Target Start/End: Original strand, 48610095 - 48610144
Alignment:
Q  420 taaacata-ccctaattaatactactaacttgccttgaaatatgaaaagt 468  Q
    |||||||| ||||||||||||| |||| |||| |||||||||||||||||    
T  48610095 taaacatatccctaattaataccactatcttgtcttgaaatatgaaaagt 48610144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 420 - 468
Target Start/End: Complemental strand, 48767711 - 48767662
Alignment:
Q  420 taaacataccc-taattaatactactaacttgccttgaaatatgaaaagt 468  Q
    ||||||||||| |||||||||||| |||| || |||||||||||||||||    
T  48767711 taaacatacccctaattaatactaataacatgtcttgaaatatgaaaagt 48767662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 2e-17; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 329 - 403
Target Start/End: Original strand, 57054 - 57128
Alignment:
Q  329 tctgtccttatatctaggcactcatttgattttctttttatccctaaatgtaagtcccttttcaaattattagat 403  Q
    ||||||| |||||||| |||||||||||||||| ||||| |||||||||||||  |||||||||||||| |||||    
T  57054 tctgtccctatatctaagcactcatttgattttatttttgtccctaaatgtaaaccccttttcaaattactagat 57128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 322 - 403
Target Start/End: Original strand, 24512025 - 24512106
Alignment:
Q  322 tactcactctgtccttatatctaggcactcatttgattttctttttatccctaaatgtaagtcccttttcaaattattagat 403  Q
    ||||| ||| |||| |||||||| |||||||||||||||| ||||| ||||||||||||| ||| |||||||||| ||||||    
T  24512025 tactccctccgtccatatatctaagcactcatttgattttatttttgtccctaaatgtaaatcctttttcaaattcttagat 24512106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 337 - 403
Target Start/End: Original strand, 38773222 - 38773288
Alignment:
Q  337 tatatctaggcactcatttgattttctttttatccctaaatgtaagtcccttttcaaattattagat 403  Q
    |||||||| |||||||||||||||| ||||||||||||||| |||  | ||||||||||||||||||    
T  38773222 tatatctaagcactcatttgattttatttttatccctaaatttaaacctcttttcaaattattagat 38773288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 332 - 468
Target Start/End: Original strand, 31746275 - 31746414
Alignment:
Q  332 gtccttatatctaggcactcatttgattttctttttatccctaaatgtaagtcccttttcaaattattagataca--nnnnnnnncttcataaacata-c 428  Q
    |||| |||| ||| |||| ||||||| ||| ||||| |||||||||||||  |||||||||||||| ||||||||           ||| |||||||| |    
T  31746275 gtccctataactaagcacccatttgactttatttttgtccctaaatgtaaaccccttttcaaattactagatacatttattattttttcctaaacatacc 31746374  T
Q  429 cctaattaatactactaacttgccttgaaatatgaaaagt 468  Q
    ||||||||||| ||||||||||| ||||||||||||||||    
T  31746375 cctaattaataatactaacttgctttgaaatatgaaaagt 31746414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 331 - 403
Target Start/End: Original strand, 38761224 - 38761296
Alignment:
Q  331 tgtccttatatctaggcactcatttgattttctttttatccctaaatgtaagtcccttttcaaattattagat 403  Q
    |||||||||||||| ||| |||||||||||| ||||| |||||| ||||||  |||||||||||||| |||||    
T  38761224 tgtccttatatctaagcattcatttgattttatttttgtccctatatgtaaaccccttttcaaattactagat 38761296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 332 - 406
Target Start/End: Complemental strand, 17933940 - 17933866
Alignment:
Q  332 gtccttatatctaggcactcatttgattttctttttatccctaaatgtaagtcccttttcaaattattagataca 406  Q
    |||||||||||||  ||||||||||||||| ||||| ||||||||| ||  ||| ||||||||||| ||||||||    
T  17933940 gtccttatatctaaacactcatttgattttatttttgtccctaaatatacatcctttttcaaattactagataca 17933866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 322 - 403
Target Start/End: Complemental strand, 25185280 - 25185199
Alignment:
Q  322 tactcactctgtccttatatctaggcactcatttgattttctttttatccctaaatgtaagtcccttttcaaattattagat 403  Q
    ||||| ||||||||||||||||| |||||||||| ||| | ||||| ||| |||||||||   ||||||||||||| |||||    
T  25185280 tactccctctgtccttatatctaagcactcatttaattctatttttgtccataaatgtaaacaccttttcaaattactagat 25185199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 420 - 468
Target Start/End: Complemental strand, 45203904 - 45203855
Alignment:
Q  420 taaacataccc-taattaatactactaacttgccttgaaatatgaaaagt 468  Q
    ||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  45203904 taaacatacccctaattaatactactaacttgtcttgaaatatgaaaagt 45203855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 322 - 402
Target Start/End: Complemental strand, 40791035 - 40790955
Alignment:
Q  322 tactcactctgtccttatatctaggcactcatttgattttctttttatccctaaatgtaagtcccttttcaaattattaga 402  Q
    ||||| |||||||| ||| ||||  ||| ||||||||||| ||||| ||||||||||||| | ||||||||||||| ||||    
T  40791035 tactcgctctgtccctatgtctaaacacccatttgattttatttttgtccctaaatgtaatttccttttcaaattactaga 40790955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 321 - 405
Target Start/End: Original strand, 45283345 - 45283429
Alignment:
Q  321 ttactcactctgtccttatatctaggcactcatttgattttctttttatccctaaatgtaagtcccttttcaaattattagatac 405  Q
    |||||| ||| ||||||||||||| ||| | |||||| ||| ||||| ||| ||||||||| | | |||||||||||||||||||    
T  45283345 ttactccctccgtccttatatctaagcatttatttgactttatttttgtccttaaatgtaaattctttttcaaattattagatac 45283429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 421 - 468
Target Start/End: Original strand, 14846883 - 14846930
Alignment:
Q  421 aaacataccctaattaatactactaacttgccttgaaatatgaaaagt 468  Q
    |||||||||||||||||||| ||||||||| |||||||||| ||||||    
T  14846883 aaacataccctaattaataccactaacttgtcttgaaatataaaaagt 14846930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 428 - 466
Target Start/End: Original strand, 14577621 - 14577659
Alignment:
Q  428 ccctaattaatactactaacttgccttgaaatatgaaaa 466  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  14577621 ccctaattaatactactaacttgtcttgaaatatgaaaa 14577659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 430 - 468
Target Start/End: Original strand, 41371775 - 41371813
Alignment:
Q  430 ctaattaatactactaacttgccttgaaatatgaaaagt 468  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  41371775 ctaattaatactactaacttgtcttgaaatatgaaaagt 41371813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 420 - 468
Target Start/End: Original strand, 1769408 - 1769457
Alignment:
Q  420 taaacataccct-aattaatactactaacttgccttgaaatatgaaaagt 468  Q
    |||||||||||| ||||||||||||||||||| |||||||||| ||||||    
T  1769408 taaacatacccttaattaatactactaacttgtcttgaaatataaaaagt 1769457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 427 - 468
Target Start/End: Original strand, 7727317 - 7727358
Alignment:
Q  427 accctaattaatactactaacttgccttgaaatatgaaaagt 468  Q
    |||||||||||||||||||||||| |||| ||||||||||||    
T  7727317 accctaattaatactactaacttgtcttggaatatgaaaagt 7727358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 420 - 468
Target Start/End: Original strand, 23399737 - 23399786
Alignment:
Q  420 taaacatacc-ctaattaatactactaacttgccttgaaatatgaaaagt 468  Q
    |||||||||| |||||||||||||||||||||  ||||||||||||||||    
T  23399737 taaacatacctctaattaatactactaacttggtttgaaatatgaaaagt 23399786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 420 - 468
Target Start/End: Complemental strand, 25198435 - 25198386
Alignment:
Q  420 taaacataccc-taattaatactactaacttgccttgaaatatgaaaagt 468  Q
    ||||||||||| |||||||||||||||||||  |||||||||||||||||    
T  25198435 taaacatacccctaattaatactactaacttatcttgaaatatgaaaagt 25198386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 420 - 468
Target Start/End: Complemental strand, 36437647 - 36437598
Alignment:
Q  420 taaacataccc-taattaatactactaacttgccttgaaatatgaaaagt 468  Q
    ||||||||||| ||| |||||||||||||||| |||||||||||||||||    
T  36437647 taaacatacccctaactaatactactaacttgtcttgaaatatgaaaagt 36437598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 420 - 468
Target Start/End: Original strand, 38761318 - 38761367
Alignment:
Q  420 taaacata-ccctaattaatactactaacttgccttgaaatatgaaaagt 468  Q
    |||||||| |||||||||||||||||| |||| |||||||||||||||||    
T  38761318 taaacatatccctaattaatactactatcttgtcttgaaatatgaaaagt 38761367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 428 - 468
Target Start/End: Complemental strand, 12762979 - 12762939
Alignment:
Q  428 ccctaattaatactactaacttgccttgaaatatgaaaagt 468  Q
    |||||||||||| |||||||||| |||||||||||||||||    
T  12762979 ccctaattaatattactaacttgtcttgaaatatgaaaagt 12762939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 428 - 468
Target Start/End: Original strand, 30262507 - 30262547
Alignment:
Q  428 ccctaattaatactactaacttgccttgaaatatgaaaagt 468  Q
    ||||||||||||||||||||||| |||||||| ||||||||    
T  30262507 ccctaattaatactactaacttgtcttgaaatttgaaaagt 30262547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 337 - 397
Target Start/End: Complemental strand, 34158148 - 34158088
Alignment:
Q  337 tatatctaggcactcatttgattttctttttatccctaaatgtaagtcccttttcaaatta 397  Q
    ||||| || |||||||||||||||| ||||| ||||||||||||| | | |||||||||||    
T  34158148 tatatttaagcactcatttgattttatttttgtccctaaatgtaaattcattttcaaatta 34158088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 420 - 468
Target Start/End: Complemental strand, 37956266 - 37956218
Alignment:
Q  420 taaacataccctaattaatactactaacttgccttgaaatatgaaaagt 468  Q
    |||||||||||||||||||| || || |||| |||||||||||||||||    
T  37956266 taaacataccctaattaatattattatcttgtcttgaaatatgaaaagt 37956218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 332 - 403
Target Start/End: Original strand, 31252524 - 31252595
Alignment:
Q  332 gtccttatatctaggcactcatttgattttctttttatccctaaatgtaagtcccttttcaaattattagat 403  Q
    ||||||||||||| |||  ||||||||||| ||||| | |||||||||||  | |||||||||||| |||||    
T  31252524 gtccttatatctaagcatccatttgattttatttttgttcctaaatgtaaacctcttttcaaattactagat 31252595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 431 - 466
Target Start/End: Complemental strand, 41087108 - 41087073
Alignment:
Q  431 taattaatactactaacttgccttgaaatatgaaaa 466  Q
    |||||||||||||||||||| |||||||||||||||    
T  41087108 taattaatactactaacttgtcttgaaatatgaaaa 41087073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 430 - 468
Target Start/End: Original strand, 40807982 - 40808020
Alignment:
Q  430 ctaattaatactactaacttgccttgaaatatgaaaagt 468  Q
    ||||| ||||||||||||||| |||||||||||||||||    
T  40807982 ctaatcaatactactaacttgtcttgaaatatgaaaagt 40808020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 420 - 468
Target Start/End: Original strand, 57148 - 57197
Alignment:
Q  420 taaacataccct-aattaatactactaacttgccttgaaatatgaaaagt 468  Q
    |||||||||||| ||||||||||| || |||| |||||||||||||||||    
T  57148 taaacatacccttaattaatactattatcttgtcttgaaatatgaaaagt 57197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 314 - 403
Target Start/End: Complemental strand, 2303347 - 2303258
Alignment:
Q  314 tttgtaattactcactctgtccttatatctaggcactcatttgattttctttttatccctaaatgtaagtcccttttcaaattattagat 403  Q
    ||||||| ||||| ||| |||| |||||||| |||  ||||||| ||| ||||| |||| ||||||||   ||||||||||||| |||||    
T  2303347 tttgtaagtactccctccgtccctatatctaagcaaccatttgaatttatttttgtcccgaaatgtaaactccttttcaaattactagat 2303258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 314 - 403
Target Start/End: Complemental strand, 2327941 - 2327852
Alignment:
Q  314 tttgtaattactcactctgtccttatatctaggcactcatttgattttctttttatccctaaatgtaagtcccttttcaaattattagat 403  Q
    ||||||| ||||| ||| |||| |||||||| |||  ||||||| ||| ||||| |||| ||||||||   ||||||||||||| |||||    
T  2327941 tttgtaagtactccctccgtccctatatctaagcaaccatttgaatttatttttgtcccgaaatgtaaactccttttcaaattactagat 2327852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 416 - 468
Target Start/End: Complemental strand, 7172369 - 7172316
Alignment:
Q  416 ttcataaacataccc-taattaatactactaacttgccttgaaatatgaaaagt 468  Q
    ||||||||||| ||| |||| ||||||||||||||  |||||||||||||||||    
T  7172369 ttcataaacatgcccataataaatactactaacttatcttgaaatatgaaaagt 7172316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 322 - 403
Target Start/End: Original strand, 24962224 - 24962305
Alignment:
Q  322 tactcactctgtccttatatctaggcactcatttgattttctttttatccctaaatgtaagtcccttttcaaattattagat 403  Q
    ||||| ||| |||| ||||| ||||||  ||||||||||| ||||| ||| |||||||||   ||||||||||||| |||||    
T  24962224 tactccctccgtccctatatgtaggcatccatttgattttatttttgtccttaaatgtaaactccttttcaaattactagat 24962305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 420 - 468
Target Start/End: Original strand, 26878688 - 26878737
Alignment:
Q  420 taaacataccc-taattaatactactaacttgccttgaaatatgaaaagt 468  Q
    ||||||||||| |||||||||||||||||||  ||||||||||| |||||    
T  26878688 taaacatacccctaattaatactactaacttatcttgaaatatgtaaagt 26878737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 431 - 468
Target Start/End: Complemental strand, 33385380 - 33385343
Alignment:
Q  431 taattaatactactaacttgccttgaaatatgaaaagt 468  Q
    |||||||||||||||||||| ||||||||| |||||||    
T  33385380 taattaatactactaacttgtcttgaaatacgaaaagt 33385343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 427 - 468
Target Start/End: Original strand, 36309564 - 36309605
Alignment:
Q  427 accctaattaatactactaacttgccttgaaatatgaaaagt 468  Q
    ||||||||||||| |||||||||| ||| |||||||||||||    
T  36309564 accctaattaataatactaacttgtcttaaaatatgaaaagt 36309605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 420 - 468
Target Start/End: Original strand, 40337151 - 40337200
Alignment:
Q  420 taaacataccct-aattaatactactaacttgccttgaaatatgaaaagt 468  Q
    |||||||||||| ||||||||||| || |||| |||||||||||||||||    
T  40337151 taaacatacccttaattaatactattatcttgtcttgaaatatgaaaagt 40337200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 420 - 468
Target Start/End: Complemental strand, 40517886 - 40517837
Alignment:
Q  420 taaacataccc-taattaatactactaacttgccttgaaatatgaaaagt 468  Q
    ||||||||||| |||||||||||||||||||| |||||||| | ||||||    
T  40517886 taaacatacccctaattaatactactaacttgtcttgaaatttaaaaagt 40517837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 322 - 403
Target Start/End: Complemental strand, 40517987 - 40517906
Alignment:
Q  322 tactcactctgtccttatatctaggcactcatttgattttctttttatccctaaatgtaagtcccttttcaaattattagat 403  Q
    ||||| ||| |||| ||||||||  ||  ||||||| ||| ||||| |||||||||||||   |||||||||||||||||||    
T  40517987 tactccctccgtccctatatctaaacatccatttgactttatttttgtccctaaatgtaaactccttttcaaattattagat 40517906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 322 - 403
Target Start/End: Original strand, 43980442 - 43980523
Alignment:
Q  322 tactcactctgtccttatatctaggcactcatttgattttctttttatccctaaatgtaagtcccttttcaaattattagat 403  Q
    ||||| ||| |||| ||||| || |||| ||||||||||| ||||| ||| |||||||||   ||||||||||||| |||||    
T  43980442 tactccctccgtccctatatgtaagcacccatttgattttatttttgtccttaaatgtaaactccttttcaaattactagat 43980523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 332 - 403
Target Start/End: Complemental strand, 46048759 - 46048688
Alignment:
Q  332 gtccttatatctaggcactcatttgattttctttttatccctaaatgtaagtcccttttcaaattattagat 403  Q
    |||| |||||||| |||||||||||||||| ||||| |||||||||||||  |||||||||||||| |||||    
T  46048759 gtccctatatctaagcactcatttgattttatttttgtccctaaatgtaaaccccttttcaaattaatagat 46048688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 332 - 468
Target Start/End: Original strand, 20945170 - 20945310
Alignment:
Q  332 gtccttatatctaggcactcatttgattttctttttatccctaaatgtaagtcccttttcaaattattagataca---nnnnnnnncttcataaacat-a 427  Q
    |||| |||||||| |||| ||||||| ||| ||||| |||||||||||||  |||||||||||||| ||||| ||            ||| ||||||| |    
T  20945170 gtccctatatctaagcacccatttgactttatttttgtccctaaatgtaaaccccttttcaaattactagatgcatttgttattattttcctaaacataa 20945269  T
Q  428 ccctaattaatactactaacttgccttgaaatatgaaaagt 468  Q
    ||||||||||||||||||||||| ||| |||||||||||||    
T  20945270 ccctaattaatactactaacttgtcttaaaatatgaaaagt 20945310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 321 - 403
Target Start/End: Complemental strand, 29645571 - 29645489
Alignment:
Q  321 ttactcactctgtccttatatctaggcactcatttgattttctttttatccctaaatgtaagtcccttttcaaattattagat 403  Q
    |||||| ||| ||||||||||||| ||| | |||||||||| ||||| |||||||||||||  | |||||||||||| |||||    
T  29645571 ttactccctccgtccttatatctaagcatttatttgattttatttttgtccctaaatgtaaaccacttttcaaattactagat 29645489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 420 - 468
Target Start/End: Original strand, 26517176 - 26517225
Alignment:
Q  420 taaacataccc-taattaatactactaacttgccttgaaatatgaaaagt 468  Q
    ||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  26517176 taaacatacccctaattaatactactaacttgtcttgaaatatgaaaagt 26517225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 420 - 468
Target Start/End: Complemental strand, 50363172 - 50363123
Alignment:
Q  420 taaacataccc-taattaatactactaacttgccttgaaatatgaaaagt 468  Q
    ||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  50363172 taaacatacccctaattaatactactaacttgtcttgaaatatgaaaagt 50363123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 420 - 467
Target Start/End: Original strand, 41308737 - 41308785
Alignment:
Q  420 taaacataccc-taattaatactactaacttgccttgaaatatgaaaag 467  Q
    ||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  41308737 taaacatacccctaattaatactactaacttgtcttgaaatatgaaaag 41308785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 332 - 403
Target Start/End: Original strand, 12077611 - 12077682
Alignment:
Q  332 gtccttatatctaggcactcatttgattttctttttatccctaaatgtaagtcccttttcaaattattagat 403  Q
    |||| ||||||||  ||||||||||||||| ||||| ||| |||||||||  |||||||||||||| |||||    
T  12077611 gtccctatatctaatcactcatttgattttatttttgtccttaaatgtaaaccccttttcaaattactagat 12077682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 322 - 381
Target Start/End: Original strand, 29676601 - 29676660
Alignment:
Q  322 tactcactctgtccttatatctaggcactcatttgattttctttttatccctaaatgtaa 381  Q
    ||||| ||| |||| |||||||| |||||||||||||||| ||||| |||||||||||||    
T  29676601 tactccctccgtccctatatctaagcactcatttgattttatttttgtccctaaatgtaa 29676660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 420 - 468
Target Start/End: Original strand, 5504536 - 5504585
Alignment:
Q  420 taaacataccc-taattaatactactaacttgccttgaaatatgaaaagt 468  Q
    ||||||||||| ||||||||||||||| |||| |||||||||||||||||    
T  5504536 taaacatacccctaattaatactactatcttgtcttgaaatatgaaaagt 5504585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 322 - 403
Target Start/End: Complemental strand, 11345566 - 11345485
Alignment:
Q  322 tactcactctgtccttatatctaggcactcatttgattttctttttatccctaaatgtaagtcccttttcaaattattagat 403  Q
    ||||| ||| |||| |||||||| |||| ||||||||||| |||||  |||||||| |||  |||||||||||||| |||||    
T  11345566 tactccctccgtccctatatctaagcacccatttgattttatttttgcccctaaatttaaaccccttttcaaattactagat 11345485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 99
Target Start/End: Complemental strand, 27844009 - 27843948
Alignment:
Q  38 aaattaaagtgaataaatgaaatattttataattattctatacattattattcagatttgaa 99  Q
    |||||||||||||||||| |||||||| ||| || || |||||||||| ||||| |||||||    
T  27844009 aaattaaagtgaataaataaaatatttcatagttcttatatacattatcattcaaatttgaa 27843948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 420 - 468
Target Start/End: Complemental strand, 29349523 - 29349474
Alignment:
Q  420 taaacatacc-ctaattaatactactaacttgccttgaaatatgaaaagt 468  Q
    |||||||||| ||||||||||||||||||||  |||||||||||||||||    
T  29349523 taaacatacctctaattaatactactaacttatcttgaaatatgaaaagt 29349474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 420 - 468
Target Start/End: Original strand, 31531089 - 31531138
Alignment:
Q  420 taaacataccc-taattaatactactaacttgccttgaaatatgaaaagt 468  Q
    ||||||||||| |||||||||||||||||||| |||||||| ||||||||    
T  31531089 taaacatacccctaattaatactactaacttgtcttgaaatttgaaaagt 31531138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 420 - 468
Target Start/End: Complemental strand, 48309589 - 48309540
Alignment:
Q  420 taaacataccc-taattaatactactaacttgccttgaaatatgaaaagt 468  Q
    ||||||||||| |||||||||||||||||||  |||||||||||||||||    
T  48309589 taaacatacccctaattaatactactaacttatcttgaaatatgaaaagt 48309540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 420 - 468
Target Start/End: Complemental strand, 26043162 - 26043115
Alignment:
Q  420 taaacataccctaattaatactactaacttgccttgaaatatgaaaagt 468  Q
    ||||||||||||||||||||||||||| ||  |||||||||||||||||    
T  26043162 taaacataccctaattaatactactaa-ttatcttgaaatatgaaaagt 26043115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 431 - 467
Target Start/End: Original strand, 33411948 - 33411984
Alignment:
Q  431 taattaatactactaacttgccttgaaatatgaaaag 467  Q
    ||||||||||||||||||||| |||||||||||||||    
T  33411948 taattaatactactaacttgcattgaaatatgaaaag 33411984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 322 - 381
Target Start/End: Original strand, 26517075 - 26517134
Alignment:
Q  322 tactcactctgtccttatatctaggcactcatttgattttctttttatccctaaatgtaa 381  Q
    ||||| ||| |||| |||||||| |||| ||||||||||| ||||| |||||||||||||    
T  26517075 tactccctccgtccatatatctaagcacccatttgattttatttttgtccctaaatgtaa 26517134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 351 - 406
Target Start/End: Original strand, 33411865 - 33411920
Alignment:
Q  351 catttgattttctttttatccctaaatgtaagtcccttttcaaattattagataca 406  Q
    ||||||||||| ||||||| | ||||||||| | | ||||||||||||||||||||    
T  33411865 catttgattttatttttattcttaaatgtaaattcattttcaaattattagataca 33411920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 420 - 466
Target Start/End: Complemental strand, 40645819 - 40645772
Alignment:
Q  420 taaacataccc-taattaatactactaacttgccttgaaatatgaaaa 466  Q
    ||||||||||| |||||||||||| ||||||| |||||||||||||||    
T  40645819 taaacatacccctaattaatactaataacttgtcttgaaatatgaaaa 40645772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 430 - 468
Target Start/End: Complemental strand, 33288000 - 33287962
Alignment:
Q  430 ctaattaatactactaacttgccttgaaatatgaaaagt 468  Q
    ||||||||||||||||||||| |||||||||| ||||||    
T  33288000 ctaattaatactactaacttgtcttgaaatataaaaagt 33287962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 416 - 468
Target Start/End: Complemental strand, 22659729 - 22659676
Alignment:
Q  416 ttcataaacataccct-aattaatactactaacttgccttgaaatatgaaaagt 468  Q
    |||||||||||| ||| ||||||||||||||| |||  ||||||||||||||||    
T  22659729 ttcataaacatatccttaattaatactactaatttgttttgaaatatgaaaagt 22659676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 420 - 468
Target Start/End: Complemental strand, 28229310 - 28229261
Alignment:
Q  420 taaacataccc-taattaatactactaacttgccttgaaatatgaaaagt 468  Q
    ||||||||||| |||||||||||||||||||| ||| |||||| ||||||    
T  28229310 taaacatacccataattaatactactaacttgtcttaaaatattaaaagt 28229261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 420 - 468
Target Start/End: Complemental strand, 30476186 - 30476137
Alignment:
Q  420 taaacataccc-taattaatactactaacttgccttgaaatatgaaaagt 468  Q
    ||||||||||| ||||||||||||||| |||  |||||||||||||||||    
T  30476186 taaacatacccctaattaatactactatcttctcttgaaatatgaaaagt 30476137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 420 - 468
Target Start/End: Complemental strand, 31819551 - 31819502
Alignment:
Q  420 taaacataccc-taattaatactactaacttgccttgaaatatgaaaagt 468  Q
    ||||||||||| |||||||||||||||  ||| |||||||||||||||||    
T  31819551 taaacatacccctaattaatactactatattgtcttgaaatatgaaaagt 31819502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 420 - 468
Target Start/End: Complemental strand, 35055931 - 35055882
Alignment:
Q  420 taaacataccc-taattaatactactaacttgccttgaaatatgaaaagt 468  Q
    ||||||||||| ||||||||||||||||||||  ||||||||| ||||||    
T  35055931 taaacatacccataattaatactactaacttgtattgaaatataaaaagt 35055882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 420 - 465
Target Start/End: Original strand, 41825099 - 41825144
Alignment:
Q  420 taaacataccctaattaatactactaacttgccttgaaatatgaaa 465  Q
    |||| |||||||| ||||||||||||||||| ||| ||||||||||    
T  41825099 taaagataccctagttaatactactaacttgtcttaaaatatgaaa 41825144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 322 - 403
Target Start/End: Complemental strand, 44083873 - 44083792
Alignment:
Q  322 tactcactctgtccttatatctaggcactcatttgattttctttttatccctaaatgtaagtcccttttcaaattattagat 403  Q
    ||||| ||| |||| |||||||| |||  ||||||| ||| ||||| |||||||||||||  || ||||||||||| |||||    
T  44083873 tactccctccgtccctatatctaagcatccatttgactttatttttgtccctaaatgtaaacccattttcaaattactagat 44083792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 321 - 403
Target Start/End: Complemental strand, 31917623 - 31917541
Alignment:
Q  321 ttactcactctgtccttatatctaggcactcatttgattttctttttatccctaaatgtaagtcccttttcaaattattagat 403  Q
    |||||| ||| |||||||||| || |||||||||||||||| ||||||||| |||||||||  || ||||||||||| |||||    
T  31917623 ttactccctccgtccttatatttaagcactcatttgattttatttttatccttaaatgtaaaccctttttcaaattactagat 31917541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 420 - 468
Target Start/End: Original strand, 30153182 - 30153230
Alignment:
Q  420 taaacataccctaattaatactactaacttgccttgaaatatgaaaagt 468  Q
    ||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  30153182 taaacatactctaattaatactactaacttgtcttgaaatatgaaaagt 30153230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 319 - 403
Target Start/End: Complemental strand, 31840345 - 31840261
Alignment:
Q  319 aattactcactctgtccttatatctaggcactcatttgattttctttttatccctaaatgtaagtcccttttcaaattattagat 403  Q
    |||||||||||| |||| ||| |||| ||| |||||||| ||| ||||| ||||||||| |||  ||||||||||||||||||||    
T  31840345 aattactcactccgtccctatttctaagcattcatttgactttatttttgtccctaaatataaaccccttttcaaattattagat 31840261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 351 - 466
Target Start/End: Complemental strand, 38136568 - 38136454
Alignment:
Q  351 catttgattttctttttatccctaaatgtaagtcccttttcaaattattagatacannnnnnnncttcataaacataccc-taattaatactactaactt 449  Q
    ||||||| ||| ||||||||| |||||||||   ||||||||||||| ||||||||         ||| | ||||||||| |||||||||||||||||||    
T  38136568 catttgactttatttttatccataaatgtaaactccttttcaaattactagatacattttttt--ttcctgaacatacccctaattaatactactaactt 38136471  T
Q  450 gccttgaaatatgaaaa 466  Q
    |||||||||||||||||    
T  38136470 gccttgaaatatgaaaa 38136454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 320 - 403
Target Start/End: Complemental strand, 46729554 - 46729471
Alignment:
Q  320 attactcactctgtccttatatctaggcactcatttgattttctttttatccctaaatgtaagtcccttttcaaattattagat 403  Q
    ||||||| ||| |||| ||||||||  ||| ||||||||||| ||||| ||||||||||||| || ||||| ||||||||||||    
T  46729554 attactccctccgtccctatatctaaacacccatttgattttatttttgtccctaaatgtaaatctctttttaaattattagat 46729471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 337 - 403
Target Start/End: Original strand, 37624997 - 37625063
Alignment:
Q  337 tatatctaggcactcatttgattttctttttatccctaaatgtaagtcccttttcaaattattagat 403  Q
    ||||| || |||||||||||||||| ||||| |||||||||||||  | ||||||||||||||||||    
T  37624997 tatatttaagcactcatttgattttatttttgtccctaaatgtaaacctcttttcaaattattagat 37625063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 346 - 468
Target Start/End: Original strand, 52552394 - 52552519
Alignment:
Q  346 gcactcatttgattttctttttatccctaaatgtaagtcccttttcaaattattagatacannnnnnnnctt--cataaacataccc-taattaatacta 442  Q
    |||| ||||||| ||| ||||| ||||||||| ||| |||||||| |||||||||||||||         ||  | ||||||||||| ||||||||||||    
T  52552394 gcacccatttgactttatttttgtccctaaatataaatccctttttaaattattagatacatttattattttttcttaaacatacccctaattaatacta 52552493  T
Q  443 ctaacttgccttgaaatatgaaaagt 468  Q
    |||||||  |||||||||||||||||    
T  52552494 ctaacttatcttgaaatatgaaaagt 52552519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 332 - 406
Target Start/End: Original strand, 54701162 - 54701236
Alignment:
Q  332 gtccttatatctaggcactcatttgattttctttttatccctaaatgtaagtcccttttcaaattattagataca 406  Q
    ||||||||||||| |||||||||||| ||| ||||| ||| |||||||||  | |||||||||||| ||||||||    
T  54701162 gtccttatatctaagcactcatttgactttatttttgtccataaatgtaaacctcttttcaaattactagataca 54701236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 420 - 468
Target Start/End: Complemental strand, 52226165 - 52226116
Alignment:
Q  420 taaacataccc-taattaatactactaacttgccttgaaatatgaaaagt 468  Q
    ||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  52226165 taaacatacccctaattaatactactaacttgtcttgaaatatgaaaagt 52226116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 420 - 468
Target Start/End: Complemental strand, 20291485 - 20291437
Alignment:
Q  420 taaacataccctaattaatactactaacttgccttgaaatatgaaaagt 468  Q
    |||||||| |||||||||||||||||||||  |||||||||||||||||    
T  20291485 taaacatatcctaattaatactactaacttatcttgaaatatgaaaagt 20291437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 322 - 403
Target Start/End: Original strand, 51918513 - 51918596
Alignment:
Q  322 tactcactctgtccttatatctaggcactcatttgattttctttttatccctaaatgtaa--gtcccttttcaaattattagat 403  Q
    ||||| ||| ||| ||||||||| |||| ||||||||||| ||||| |||||||||||||   ||||||||||||||| |||||    
T  51918513 tactccctccgtctttatatctaagcacccatttgattttatttttgtccctaaatgtaattatcccttttcaaattactagat 51918596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 420 - 468
Target Start/End: Original strand, 20185615 - 20185664
Alignment:
Q  420 taaacataccct-aattaatactactaacttgccttgaaatatgaaaagt 468  Q
    |||||||||||| ||||||||||||||| ||| |||||||||||||||||    
T  20185615 taaacatacccttaattaatactactaatttgtcttgaaatatgaaaagt 20185664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 420 - 468
Target Start/End: Complemental strand, 25477371 - 25477322
Alignment:
Q  420 taaacataccc-taattaatactactaacttgccttgaaatatgaaaagt 468  Q
    ||||||||||| ||||||||||||||| |||| |||||||||||||||||    
T  25477371 taaacatacccctaattaatactactatcttgtcttgaaatatgaaaagt 25477322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 420 - 468
Target Start/End: Original strand, 33246456 - 33246505
Alignment:
Q  420 taaacatac-cctaattaatactactaacttgccttgaaatatgaaaagt 468  Q
    ||||||||| |||||||||||||||||||||| ||||||||||| |||||    
T  33246456 taaacatactcctaattaatactactaacttgtcttgaaatatgtaaagt 33246505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 427 - 468
Target Start/End: Complemental strand, 41459725 - 41459684
Alignment:
Q  427 accctaattaatactactaacttgccttgaaatatgaaaagt 468  Q
    |||||||||||||||||||||||| | |||||||||||||||    
T  41459725 accctaattaatactactaacttgtcatgaaatatgaaaagt 41459684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 420 - 468
Target Start/End: Original strand, 41919997 - 41920046
Alignment:
Q  420 taaacataccc-taattaatactactaacttgccttgaaatatgaaaagt 468  Q
    ||||||||||| |||||||||||||||||||  |||||||||||||||||    
T  41919997 taaacatacccctaattaatactactaacttatcttgaaatatgaaaagt 41920046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 420 - 468
Target Start/End: Complemental strand, 54359829 - 54359780
Alignment:
Q  420 taaacatac-cctaattaatactactaacttgccttgaaatatgaaaagt 468  Q
    ||||||||| ||||||||||||||||| |||| |||||||||||||||||    
T  54359829 taaacatacacctaattaatactactatcttgtcttgaaatatgaaaagt 54359780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 428 - 468
Target Start/End: Complemental strand, 16070568 - 16070528
Alignment:
Q  428 ccctaattaatactactaacttgccttgaaatatgaaaagt 468  Q
    |||||||||||||||||||||||  ||||||||||||||||    
T  16070568 ccctaattaatactactaacttgtattgaaatatgaaaagt 16070528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 428 - 468
Target Start/End: Original strand, 22750810 - 22750850
Alignment:
Q  428 ccctaattaatactactaacttgccttgaaatatgaaaagt 468  Q
    ||||||||||||||||||| ||| |||||||||||||||||    
T  22750810 ccctaattaatactactaagttgtcttgaaatatgaaaagt 22750850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 428 - 468
Target Start/End: Complemental strand, 43800945 - 43800905
Alignment:
Q  428 ccctaattaatactactaacttgccttgaaatatgaaaagt 468  Q
    |||||||||||||||| |||||| |||||||||||||||||    
T  43800945 ccctaattaatactaccaacttgtcttgaaatatgaaaagt 43800905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 322 - 406
Target Start/End: Complemental strand, 43801055 - 43800971
Alignment:
Q  322 tactcactctgtccttatatctaggcactcatttgattttctttttatccctaaatgtaagtcccttttcaaattattagataca 406  Q
    ||||| ||| |||| |||||||| || | ||||||| ||| ||||| |||||||||||||  ||| |||||||||| ||||||||    
T  43801055 tactccctccgtccctatatctaagcccccatttgactttatttttgtccctaaatgtaaaccccctttcaaattactagataca 43800971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 337 - 380
Target Start/End: Complemental strand, 25477457 - 25477414
Alignment:
Q  337 tatatctaggcactcatttgattttctttttatccctaaatgta 380  Q
    |||||||| |||||||||||||||| ||||| ||||||||||||    
T  25477457 tatatctaagcactcatttgattttatttttgtccctaaatgta 25477414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 337 - 403
Target Start/End: Complemental strand, 5536716 - 5536650
Alignment:
Q  337 tatatctaggcactcatttgattttctttttatccctaaatgtaagtcccttttcaaattattagat 403  Q
    |||||||| | || ||||||||||| ||||| |||||||||||||  | |||||||||||| |||||    
T  5536716 tatatctaagtacccatttgattttatttttgtccctaaatgtaaacctcttttcaaattactagat 5536650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 333 - 403
Target Start/End: Complemental strand, 22651700 - 22651630
Alignment:
Q  333 tccttatatctaggcactcatttgattttctttttatccctaaatgtaagtcccttttcaaattattagat 403  Q
    ||||||||| ||  ||| ||||||||||| ||||||||| |||||||||   ||||||||||||| |||||    
T  22651700 tccttatatgtaatcacccatttgattttatttttatccttaaatgtaaactccttttcaaattactagat 22651630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 337 - 403
Target Start/End: Complemental strand, 24072999 - 24072933
Alignment:
Q  337 tatatctaggcactcatttgattttctttttatccctaaatgtaagtcccttttcaaattattagat 403  Q
    |||||||| |||| ||||||||||| ||||| ||| ||||| |||  |||||||||||||| |||||    
T  24072999 tatatctaagcacccatttgattttatttttgtccataaatataaaccccttttcaaattactagat 24072933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 322 - 403
Target Start/End: Complemental strand, 12624943 - 12624862
Alignment:
Q  322 tactcactctgtccttatatctaggcactcatttgattttctttttatccctaaatgtaagtcccttttcaaattattagat 403  Q
    ||||| ||| |||| ||||| || |||| ||||||||||| ||||| ||| |||||||||   ||||||||||||| |||||    
T  12624943 tactccctccgtccctatatgtaagcacccatttgattttatttttgtccttaaatgtaaactccttttcaaattactagat 12624862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 420 - 468
Target Start/End: Original strand, 13096501 - 13096550
Alignment:
Q  420 taaacataccct-aattaatactactaacttgccttgaaatatgaaaagt 468  Q
    |||||||||||| ||||||||||| ||||||| ||| |||||||||||||    
T  13096501 taaacatacccttaattaatactagtaacttgtcttaaaatatgaaaagt 13096550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 335 - 400
Target Start/End: Complemental strand, 19654663 - 19654598
Alignment:
Q  335 cttatatctaggcactcatttgattttctttttatccctaaatgtaagtcccttttcaaattatta 400  Q
    |||||||||| |||  ||||||||||| |||| ||||||||||||||   | ||||||||||||||    
T  19654663 cttatatctaagcatccatttgattttattttcatccctaaatgtaaactctttttcaaattatta 19654598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 420 - 468
Target Start/End: Original strand, 20262353 - 20262402
Alignment:
Q  420 taaacataccct-aattaatactactaacttgccttgaaatatgaaaagt 468  Q
    |||||||||||| |||||||||||||| ||||  ||||||||||||||||    
T  20262353 taaacatacccttaattaatactactatcttgttttgaaatatgaaaagt 20262402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 420 - 468
Target Start/End: Complemental strand, 21171870 - 21171821
Alignment:
Q  420 taaacataccc-taattaatactactaacttgccttgaaatatgaaaagt 468  Q
    ||||||||||| |||||||||||||||||||  ||||||||||| |||||    
T  21171870 taaacatacccctaattaatactactaacttatcttgaaatatgtaaagt 21171821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 420 - 468
Target Start/End: Complemental strand, 24072913 - 24072864
Alignment:
Q  420 taaacataccct-aattaatactactaacttgccttgaaatatgaaaagt 468  Q
    |||||||||||| |||||||||||| | |||| |||||||||||||||||    
T  24072913 taaacatacccttaattaatactaccatcttgtcttgaaatatgaaaagt 24072864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 420 - 468
Target Start/End: Complemental strand, 39414380 - 39414331
Alignment:
Q  420 taaacataccc-taattaatactactaacttgccttgaaatatgaaaagt 468  Q
    ||||||||||| |||||||||| ||||||||  |||||||||||||||||    
T  39414380 taaacatacccctaattaataccactaacttatcttgaaatatgaaaagt 39414331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 352 - 397
Target Start/End: Original strand, 41945661 - 41945706
Alignment:
Q  352 atttgattttctttttatccctaaatgtaagtcccttttcaaatta 397  Q
    |||| ||||| ||||| ||||||||||||| |||||||||||||||    
T  41945661 attttattttatttttgtccctaaatgtaaatcccttttcaaatta 41945706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 420 - 468
Target Start/End: Original strand, 52198687 - 52198736
Alignment:
Q  420 taaacataccc-taattaatactactaacttgccttgaaatatgaaaagt 468  Q
    ||||||||||| ||||||||||||||||||||  ||||||||| ||||||    
T  52198687 taaacatacccctaattaatactactaacttgttttgaaatataaaaagt 52198736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 337 - 402
Target Start/End: Complemental strand, 54438742 - 54438677
Alignment:
Q  337 tatatctaggcactcatttgattttctttttatccctaaatgtaagtcccttttcaaattattaga 402  Q
    |||||||| |||  ||||| ||||| ||||| ||||||||||||| || |||||||||||| ||||    
T  54438742 tatatctaagcatccattttattttatttttgtccctaaatgtaaatctcttttcaaattagtaga 54438677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 420 - 468
Target Start/End: Original strand, 56217012 - 56217061
Alignment:
Q  420 taaacatacc-ctaattaatactactaacttgccttgaaatatgaaaagt 468  Q
    |||||||||| |||||||||||||||| |||  |||||||||||||||||    
T  56217012 taaacatacctctaattaatactactatcttatcttgaaatatgaaaagt 56217061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000005; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 420 - 468
Target Start/End: Complemental strand, 30249008 - 30248959
Alignment:
Q  420 taaacataccc-taattaatactactaacttgccttgaaatatgaaaagt 468  Q
    ||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  30249008 taaacatacccctaattaatactactaacttgtcttgaaatatgaaaagt 30248959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 322 - 468
Target Start/End: Complemental strand, 1764060 - 1763910
Alignment:
Q  322 tactcactctgtccttatatctaggcactcatttgattttctttttatccctaaatgtaagtcccttttcaaattattagatacannnnnnnnc---ttc 418  Q
    ||||| ||| |||| |||||||| |||||||||||||||| ||||| || |||||| |||   ||||| ||||||||||||| ||            |||    
T  1764060 tactccctccgtccctatatctaagcactcatttgattttatttttgtctctaaatataaacacctttccaaattattagatgcatttattattattttc 1763961  T
Q  419 ataaacataccct-aattaatactactaacttgccttgaaatatgaaaagt 468  Q
     |||||||||||| ||||||||||||||||||| |||||||| ||||||||    
T  1763960 ctaaacatacccttaattaatactactaacttgtcttgaaatttgaaaagt 1763910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 420 - 466
Target Start/End: Original strand, 3887902 - 3887949
Alignment:
Q  420 taaacataccc-taattaatactactaacttgccttgaaatatgaaaa 466  Q
    ||||||||||| |||||||||||||||||||| |||||||||||||||    
T  3887902 taaacatacccctaattaatactactaacttgtcttgaaatatgaaaa 3887949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 420 - 466
Target Start/End: Original strand, 28238273 - 28238320
Alignment:
Q  420 taaacataccc-taattaatactactaacttgccttgaaatatgaaaa 466  Q
    ||||||||||| |||||||||||||||||||| |||||||||||||||    
T  28238273 taaacatacccctaattaatactactaacttgtcttgaaatatgaaaa 28238320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 322 - 403
Target Start/End: Complemental strand, 19839178 - 19839097
Alignment:
Q  322 tactcactctgtccttatatctaggcactcatttgattttctttttatccctaaatgtaagtcccttttcaaattattagat 403  Q
    ||||| ||| |||| ||||| || |||| ||||||||||| ||||| |||||||||||||   ||||||||||||| |||||    
T  19839178 tactccctccgtccctatatgtaagcacccatttgattttatttttgtccctaaatgtaaactccttttcaaattactagat 19839097  T

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Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 420 - 468
Target Start/End: Original strand, 31945872 - 31945921
Alignment:
Q  420 taaacata-ccctaattaatactactaacttgccttgaaatatgaaaagt 468  Q
    |||||||| ||||||||||||||||||||||| ||||||||||| |||||    
T  31945872 taaacatatccctaattaatactactaacttgtcttgaaatatgtaaagt 31945921  T

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Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 420 - 468
Target Start/End: Complemental strand, 16186715 - 16186667
Alignment:
Q  420 taaacataccctaattaatactactaacttgccttgaaatatgaaaagt 468  Q
    ||||||||| ||||||||||| |||| |||| |||||||||||||||||    
T  16186715 taaacatacactaattaataccactatcttgtcttgaaatatgaaaagt 16186667  T

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Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 428 - 468
Target Start/End: Complemental strand, 31039283 - 31039243
Alignment:
Q  428 ccctaattaatactactaacttgccttgaaatatgaaaagt 468  Q
    ||||||| ||||||||||||||| |||||||||||||||||    
T  31039283 ccctaatcaatactactaacttgtcttgaaatatgaaaagt 31039243  T

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Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 415 - 466
Target Start/End: Complemental strand, 7365637 - 7365586
Alignment:
Q  415 cttcataaacataccctaattaatactactaacttgccttgaaatatgaaaa 466  Q
    |||||||||||| ||||||||||||||| ||||||   ||||||||||||||    
T  7365637 cttcataaacatcccctaattaatactattaacttattttgaaatatgaaaa 7365586  T

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Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 329 - 403
Target Start/End: Complemental strand, 6791616 - 6791542
Alignment:
Q  329 tctgtccttatatctaggcactcatttgattttctttttatccctaaatgtaagtcccttttcaaattattagat 403  Q
    ||||||| |||||||| |||| ||||||||||| ||||| ||  |||||||||  |||||||||| ||| |||||    
T  6791616 tctgtccctatatctaagcacccatttgattttatttttgtctttaaatgtaaaccccttttcaacttactagat 6791542  T

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Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 420 - 468
Target Start/End: Complemental strand, 3729568 - 3729519
Alignment:
Q  420 taaacatac-cctaattaatactactaacttgccttgaaatatgaaaagt 468  Q
    ||||||||| ||||||||||| |||||||||| ||||||||||| |||||    
T  3729568 taaacatactcctaattaatattactaacttgtcttgaaatatgtaaagt 3729519  T

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Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 429 - 466
Target Start/End: Complemental strand, 5191291 - 5191254
Alignment:
Q  429 cctaattaatactactaacttgccttgaaatatgaaaa 466  Q
    |||||||||||||||||||||  |||||||||||||||    
T  5191291 cctaattaatactactaacttatcttgaaatatgaaaa 5191254  T

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Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 420 - 468
Target Start/End: Complemental strand, 9461439 - 9461390
Alignment:
Q  420 taaacataccc-taattaatactactaacttgccttgaaatatgaaaagt 468  Q
    ||||||||||| |||||||| |||||||| || |||||||||||||||||    
T  9461439 taaacatacccataattaattctactaacctgtcttgaaatatgaaaagt 9461390  T

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Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 431 - 468
Target Start/End: Complemental strand, 15981928 - 15981891
Alignment:
Q  431 taattaatactactaacttgccttgaaatatgaaaagt 468  Q
    |||||||||||| ||||||| |||||||||||||||||    
T  15981928 taattaatactattaacttgtcttgaaatatgaaaagt 15981891  T

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Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 431 - 468
Target Start/End: Original strand, 30465940 - 30465977
Alignment:
Q  431 taattaatactactaacttgccttgaaatatgaaaagt 468  Q
    |||||||||||||||||||  |||||||||||||||||    
T  30465940 taattaatactactaacttatcttgaaatatgaaaagt 30465977  T

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Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 431 - 468
Target Start/End: Complemental strand, 31536146 - 31536109
Alignment:
Q  431 taattaatactactaacttgccttgaaatatgaaaagt 468  Q
    |||||||||||||||||||  |||||||||||||||||    
T  31536146 taattaatactactaacttatcttgaaatatgaaaagt 31536109  T

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Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 322 - 403
Target Start/End: Original strand, 31945771 - 31945852
Alignment:
Q  322 tactcactctgtccttatatctaggcactcatttgattttctttttatccctaaatgtaagtcccttttcaaattattagat 403  Q
    ||||| ||| |||||||||| ||  ||||||||||||||| ||||| || ||||||||||    |||||||||||| |||||    
T  31945771 tactccctccgtccttatatgtaaccactcatttgattttatttttgtctctaaatgtaaacttcttttcaaattactagat 31945852  T

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Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 420 - 468
Target Start/End: Original strand, 34513178 - 34513227
Alignment:
Q  420 taaacataccc-taattaatactactaacttgccttgaaatatgaaaagt 468  Q
    ||||||||||| |||||| |||||||| |||| |||||||||||||||||    
T  34513178 taaacatacccctaattattactactatcttgtcttgaaatatgaaaagt 34513227  T

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Target: scaffold0038 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 420 - 466
Target Start/End: Original strand, 38435 - 38482
Alignment:
Q  420 taaacataccc-taattaatactactaacttgccttgaaatatgaaaa 466  Q
    ||||||||||| |||||||||||||||||||| |||||||||||||||    
T  38435 taaacatacccctaattaatactactaacttgtcttgaaatatgaaaa 38482  T

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Target: scaffold0012 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 430 - 468
Target Start/End: Original strand, 99787 - 99825
Alignment:
Q  430 ctaattaatactactaacttgccttgaaatatgaaaagt 468  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  99787 ctaattaatactactaacttgtcttgaaatatgaaaagt 99825  T

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Target: scaffold1091 (Bit Score: 31; Significance: 0.00000007; HSPs: 2)
Name: scaffold1091
Description:

Target: scaffold1091; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 337 - 403
Target Start/End: Original strand, 1786 - 1852
Alignment:
Q  337 tatatctaggcactcatttgattttctttttatccctaaatgtaagtcccttttcaaattattagat 403  Q
    |||||||| |||| ||||||| ||| ||||| ||||| |||||||  |||||||||||||| |||||    
T  1786 tatatctaagcacccatttgactttatttttgtccctcaatgtaaaccccttttcaaattactagat 1852  T

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Target: scaffold1091; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 420 - 468
Target Start/End: Original strand, 1872 - 1921
Alignment:
Q  420 taaacataccc-taattaatactactaacttgccttgaaatatgaaaagt 468  Q
    ||||||||||| |||||||||||||||| ||| |||| ||||||||||||    
T  1872 taaacatacccctaattaatactactaatttgtcttgcaatatgaaaagt 1921  T

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Target: scaffold0009 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 420 - 465
Target Start/End: Complemental strand, 25844 - 25798
Alignment:
Q  420 taaacataccc-taattaatactactaacttgccttgaaatatgaaa 465  Q
    ||||||||||| |||||||||||||| ||||| ||||||||||||||    
T  25844 taaacatacccctaattaatactactcacttgtcttgaaatatgaaa 25798  T

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Target: scaffold0121 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 420 - 468
Target Start/End: Complemental strand, 24205 - 24156
Alignment:
Q  420 taaacataccc-taattaatactactaacttgccttgaaatatgaaaagt 468  Q
    ||||||||||| |||||||||||| ||||||  |||||||||||||||||    
T  24205 taaacatacccctaattaatactattaacttatcttgaaatatgaaaagt 24156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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