View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4940-Insertion-4 (Length: 586)
Name: NF4940-Insertion-4
Description: NF4940
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4940-Insertion-4 |
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Alignment Details
Target: chr8 (Bit Score: 441; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 441; E-Value: 0
Query Start/End: Original strand, 8 - 570
Target Start/End: Complemental strand, 30554448 - 30553894
Alignment:
| Q |
8 |
ctatccatatatggatagatgtcaaagttttataatattttacgagtacactatcaaattaatctttgattttatatgatactcttaaatgacttcctta |
107 |
Q |
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| T |
30554448 |
ctatccatatatagatagatgtcaaagttttataatattttacgagtaaactatcaaattaatctttgattttgtatgatattcttaaatgacttcctca |
30554349 |
T |
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| Q |
108 |
aattaaaactattttaaaaaggtgtct-gattcaattaaaacatcaagttgatctctatatttaacaatttacctacaattagatccctatattttaacc |
206 |
Q |
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| T |
30554348 |
aattaaaactattttaaaaaggtgtcttggttctattaaaacatcaagttgatctctatatttaacaatttacctacaattagatccctatattttaacc |
30554249 |
T |
|
| Q |
207 |
actttctatcaagttgatctgctatatcagtttgatcattatattcaaccactttctatcaatttaatctttaacatgttcttagataaaggtctctcac |
306 |
Q |
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| T |
30554248 |
actttctatcaagttgatctaccat--caatttgatcattatattcaaccactttctatcaatttaatctttaacatgttcttagataaagatctctcac |
30554151 |
T |
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| Q |
307 |
tctactcaaatgtcaagttggtctctatatttaaccatttacagtcaataaaatccccatattttaatcacttacttactaccaggttgatcattatttt |
406 |
Q |
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| T |
30554150 |
tctactcaaatgtcaagttggtctctatatttaaccatttacggtcaataaaatccccatattttaatcacttacttactaccaggttgatcattatttt |
30554051 |
T |
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| Q |
407 |
caaccactcaatatcaatttagtcttagatggtttttaatattctattgatgcgtgacatgtgaaacttgaa-attagattcttcaaattgagctttgaa |
505 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| |||| ||||||||||||||||||||| |
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| T |
30554050 |
caaccactcaatatcaatttagtcttagatggtttttaatatcctattgatgcgtgacatgtgaaatttgaagtttaggttcttcaaattgagctttgaa |
30553951 |
T |
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| Q |
506 |
ataatagcccgcaggcccaaaccatagaaatatagacacttaaaacatacatcgtgtgaagataa |
570 |
Q |
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| T |
30553950 |
ataatagcccgcaggcccaaacc--------atagacacttaaaacatacatcgtgttaagataa |
30553894 |
T |
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