View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4941_low_12 (Length: 235)
Name: NF4941_low_12
Description: NF4941
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4941_low_12 |
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Alignment Details
Target: chr2 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 21 - 228
Target Start/End: Original strand, 37599894 - 37600101
Alignment:
| Q |
21 |
gataatgtgagtccagatccgtctcgattccctgtccattatatattaccattttacccttggaaacgcaagaaatacactacttttaatatctatccct |
120 |
Q |
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| T |
37599894 |
gataatgtgagtccagatccgtctcgattccctgttcattatatattaccattttacccttggaaacgcaagaaatacactacttttaatatatatccct |
37599993 |
T |
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| Q |
121 |
tatacattctacattaccattttacccctgaatggctaccataaaataacttcattcaatttcgtgtcaatgtactttgttaaaaagttaattgtaggtc |
220 |
Q |
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| T |
37599994 |
tatacattctacattaccattttacccctgaatggctaccataaaataacttcattcaatttcgtgtcaatgtactttgttaaaaagttaattgtaggtc |
37600093 |
T |
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| Q |
221 |
tctgtgat |
228 |
Q |
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|||||||| |
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| T |
37600094 |
tctgtgat |
37600101 |
T |
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