View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4943_high_7 (Length: 264)
Name: NF4943_high_7
Description: NF4943
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4943_high_7 |
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Alignment Details
Target: chr1 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 16 - 253
Target Start/End: Complemental strand, 8452081 - 8451846
Alignment:
| Q |
16 |
tagacttcgtcagaatgtactatacaaattctttttcgctctactttttatttt--gaattacttcgtaataaataagttacttgattaatcttcacgca |
113 |
Q |
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| T |
8452081 |
tagacttcgacagaatgtactatacaaattctttttcgctctacttttttttttttgaattacttcgtaataa----gttacttgattaatcttcacgca |
8451986 |
T |
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| Q |
114 |
tgcatttttataggatattgagagcctcaagcatgaagtgacaaagaaaatgcagaaactcgaggtatgccacatttgtgtgtcccttgtttcacctctg |
213 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
8451985 |
tgcatttttataggatattgagagcctcaagcatgaagtgacaaagaaaatgcagaaactcgaggtatgccacatttgtgtgtcccttgttacacctctg |
8451886 |
T |
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| Q |
214 |
ctcactgaatatattgtaagatataatatttttacttctt |
253 |
Q |
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||||||||||||||| |||||||||||||||||||||||| |
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| T |
8451885 |
ctcactgaatatattataagatataatatttttacttctt |
8451846 |
T |
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