View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4945-Insertion-8 (Length: 248)
Name: NF4945-Insertion-8
Description: NF4945
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4945-Insertion-8 |
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| [»] chr7 (2 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 168; Significance: 4e-90; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 77 - 248
Target Start/End: Original strand, 32557869 - 32558040
Alignment:
| Q |
77 |
ggtgagaggattggagtaacagaagaaccaggaggggtatcatggtaaacaaaattggtacgagcacgcgagccacgcatgccacgtgcggctctgtcgt |
176 |
Q |
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| T |
32557869 |
ggtgagaggattggagtaacagaagaaccaggaggggtatcatggtaaacaaaattggtacgagcacgtgagccacgcatgccacgtgcggctctgtcgt |
32557968 |
T |
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| Q |
177 |
aagctaaagctgcttcttcagcagtgtcgaatgttcctaaccagtgtctttcttttgttgaaggatcgcgta |
248 |
Q |
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| T |
32557969 |
aagctaaagctgcttcttcagcagtgtcgaatgttcctaaccagtgtctttcttttgttgaaggatcgcgta |
32558040 |
T |
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Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 11 - 53
Target Start/End: Original strand, 32557800 - 32557842
Alignment:
| Q |
11 |
ggttcaggttgaagaacaaaagaaaggtcgtaaaaactttgag |
53 |
Q |
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| T |
32557800 |
ggttcaggttgaagaacaaaagaaaggtcgtaaaaactttgag |
32557842 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 167 - 243
Target Start/End: Original strand, 6507659 - 6507735
Alignment:
| Q |
167 |
gctctgtcgtaagctaaagctgcttcttcagcagtgtcgaatgttcctaaccagtgtctttcttttgttgaaggatc |
243 |
Q |
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| T |
6507659 |
gctctatcataagcaaaagcagcttcttgagcagtatcaaatgttcctaaccaatgtctttctttagttgcaggatc |
6507735 |
T |
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