View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4945_low_17 (Length: 227)

Name: NF4945_low_17
Description: NF4945
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4945_low_17
NF4945_low_17
[»] chr4 (31 HSPs)
chr4 (1-225)||(17521794-17522018)
chr4 (6-141)||(5575427-5575562)
chr4 (3-157)||(17522473-17522627)
chr4 (6-211)||(5574200-5574405)
chr4 (6-156)||(37642457-37642607)
chr4 (6-156)||(54372796-54372945)
chr4 (3-119)||(20945391-20945507)
chr4 (20-194)||(21570354-21570527)
chr4 (6-136)||(54373869-54373998)
chr4 (1-156)||(49923677-49923831)
chr4 (7-109)||(31204650-31204752)
chr4 (3-107)||(20944374-20944478)
chr4 (5-109)||(7261456-7261560)
chr4 (5-109)||(34095572-34095676)
chr4 (5-109)||(38032333-38032437)
chr4 (5-88)||(18091702-18091785)
chr4 (3-212)||(5470060-5470269)
chr4 (16-88)||(17356483-17356555)
chr4 (5-109)||(22621968-22622072)
chr4 (7-194)||(31205627-31205813)
chr4 (1-74)||(5547044-5547117)
chr4 (11-156)||(21569300-21569444)
chr4 (5-109)||(22623056-22623160)
chr4 (5-109)||(38031269-38031373)
chr4 (1-152)||(49922561-49922711)
chr4 (5-60)||(34122734-34122789)
chr4 (125-219)||(4373364-4373458)
chr4 (6-143)||(46425918-46426055)
chr4 (8-158)||(54822426-54822575)
chr4 (5-109)||(10802990-10803094)
chr4 (6-110)||(46425724-46425827)
[»] chr1 (26 HSPs)
chr1 (6-213)||(51088527-51088735)
chr1 (3-212)||(51694414-51694621)
chr1 (1-212)||(40722945-40723155)
chr1 (20-214)||(51089741-51089935)
chr1 (1-119)||(49618517-49618635)
chr1 (1-143)||(40721847-40721988)
chr1 (1-156)||(49619730-49619885)
chr1 (1-156)||(45042659-45042813)
chr1 (1-156)||(52439197-52439351)
chr1 (3-109)||(5488778-5488884)
chr1 (1-109)||(40778468-40778576)
chr1 (5-109)||(7111388-7111492)
chr1 (9-88)||(5488623-5488702)
chr1 (2-109)||(40779556-40779663)
chr1 (5-88)||(52759485-52759568)
chr1 (7-73)||(18655579-18655645)
chr1 (5-109)||(45228376-45228480)
chr1 (9-109)||(50484913-50485013)
chr1 (5-109)||(52761509-52761613)
chr1 (5-88)||(51693269-51693352)
chr1 (16-109)||(40187703-40187796)
chr1 (5-109)||(51468814-51468918)
chr1 (5-88)||(21203133-21203216)
chr1 (12-106)||(21246399-21246493)
chr1 (8-189)||(9849986-9850166)
chr1 (5-109)||(7110327-7110431)
[»] chr7 (44 HSPs)
chr7 (3-212)||(19218895-19219103)
chr7 (6-211)||(24653584-24653789)
chr7 (10-194)||(47536771-47536954)
chr7 (6-196)||(24651528-24651718)
chr7 (7-109)||(42520317-42520419)
chr7 (4-109)||(22794237-22794342)
chr7 (16-156)||(29408296-29408435)
chr7 (5-88)||(29186786-29186869)
chr7 (5-156)||(29409154-29409304)
chr7 (1-74)||(29658526-29658599)
chr7 (6-119)||(32893543-32893656)
chr7 (7-156)||(40321119-40321267)
chr7 (6-90)||(32518532-32518616)
chr7 (5-109)||(43113775-43113879)
chr7 (1-143)||(36395874-36396017)
chr7 (22-189)||(47535676-47535842)
chr7 (7-73)||(35044752-35044818)
chr7 (7-213)||(36584823-36585028)
chr7 (7-109)||(42521176-42521278)
chr7 (1-109)||(4973961-4974069)
chr7 (5-109)||(18787249-18787353)
chr7 (5-88)||(19217749-19217832)
chr7 (5-88)||(29187943-29188026)
chr7 (5-88)||(44748476-44748559)
chr7 (5-80)||(45398653-45398728)
chr7 (5-88)||(45399923-45400006)
chr7 (1-114)||(29657080-29657194)
chr7 (1-157)||(40918252-40918405)
chr7 (5-109)||(7011734-7011839)
chr7 (5-109)||(7027092-7027197)
chr7 (11-156)||(23153552-23153696)
chr7 (8-109)||(40322154-40322255)
chr7 (3-88)||(44746848-44746933)
chr7 (5-109)||(9392728-9392832)
chr7 (5-109)||(44417558-44417662)
chr7 (5-88)||(9391641-9391724)
chr7 (5-88)||(13597265-13597348)
chr7 (7-88)||(26005473-26005554)
chr7 (7-156)||(35045812-35045960)
chr7 (3-104)||(46203568-46203669)
chr7 (2-109)||(4973609-4973716)
chr7 (4-60)||(8540708-8540764)
chr7 (5-109)||(18788473-18788577)
chr7 (5-33)||(45689023-45689051)
[»] chr3 (39 HSPs)
chr3 (6-212)||(2764003-2764211)
chr3 (6-212)||(44115430-44115636)
chr3 (6-211)||(44116599-44116804)
chr3 (1-156)||(8895206-8895360)
chr3 (6-214)||(2762780-2762988)
chr3 (1-214)||(50003135-50003347)
chr3 (15-143)||(27226465-27226592)
chr3 (5-88)||(5689841-5689924)
chr3 (16-119)||(48336433-48336536)
chr3 (1-106)||(46690206-46690312)
chr3 (5-109)||(28777600-28777704)
chr3 (5-109)||(37609422-37609526)
chr3 (5-109)||(37610676-37610780)
chr3 (5-109)||(47431100-47431204)
chr3 (9-88)||(31937157-31937236)
chr3 (6-109)||(53180718-53180821)
chr3 (5-87)||(46903537-46903619)
chr3 (6-136)||(48338034-48338163)
chr3 (9-109)||(31938224-31938324)
chr3 (5-88)||(17740952-17741035)
chr3 (5-88)||(19042272-19042355)
chr3 (5-88)||(43393966-43394049)
chr3 (7-156)||(50002463-50002611)
chr3 (12-152)||(2088896-2089034)
chr3 (5-109)||(28776549-28776653)
chr3 (55-143)||(50719719-50719805)
chr3 (55-143)||(50793043-50793129)
chr3 (5-57)||(53101675-53101727)
chr3 (9-109)||(54354308-54354408)
chr3 (5-88)||(2232724-2232807)
chr3 (1-60)||(14206693-14206752)
chr3 (1-60)||(14214441-14214500)
chr3 (7-105)||(21248175-21248273)
chr3 (6-60)||(27749237-27749291)
chr3 (11-88)||(5691014-5691091)
chr3 (5-50)||(52522086-52522131)
chr3 (176-212)||(9769591-9769627)
chr3 (2-106)||(46688505-46688608)
chr3 (5-73)||(55209918-55209986)
[»] scaffold0035 (2 HSPs)
scaffold0035 (9-212)||(21135-21338)
scaffold0035 (9-220)||(22386-22596)
[»] scaffold0081 (1 HSPs)
scaffold0081 (3-211)||(42921-43126)
[»] chr8 (23 HSPs)
chr8 (1-214)||(20066069-20066282)
chr8 (1-156)||(11080944-11081098)
chr8 (1-156)||(35462901-35463055)
chr8 (23-141)||(35462732-35462849)
chr8 (5-88)||(9244187-9244270)
chr8 (5-109)||(30640898-30641002)
chr8 (5-88)||(9245344-9245427)
chr8 (12-109)||(4534129-4534226)
chr8 (1-106)||(12820011-12820116)
chr8 (5-109)||(26366107-26366211)
chr8 (5-88)||(26364863-26364946)
chr8 (5-88)||(41636953-41637036)
chr8 (1-157)||(20067147-20067304)
chr8 (52-156)||(9189444-9189546)
chr8 (5-109)||(20309024-20309128)
chr8 (5-109)||(21095657-21095761)
chr8 (9-109)||(41638070-41638169)
chr8 (5-60)||(3714452-3714507)
chr8 (7-105)||(41767082-41767180)
chr8 (2-156)||(42307546-42307698)
chr8 (52-109)||(22913287-22913344)
chr8 (5-73)||(22012274-22012342)
chr8 (5-73)||(22013172-22013240)
[»] chr5 (26 HSPs)
chr5 (6-212)||(25212948-25213155)
chr5 (6-212)||(25277100-25277307)
chr5 (7-194)||(38603668-38603854)
chr5 (9-214)||(1011977-1012182)
chr5 (5-141)||(30673384-30673520)
chr5 (1-156)||(33362479-33362633)
chr5 (10-189)||(42962040-42962218)
chr5 (5-159)||(30674746-30674900)
chr5 (32-213)||(1010827-1011008)
chr5 (1-119)||(14357794-14357912)
chr5 (1-119)||(30916030-30916148)
chr5 (1-74)||(30915628-30915701)
chr5 (1-156)||(14356482-14356635)
chr5 (7-194)||(39051591-39051776)
chr5 (5-109)||(19228939-19229043)
chr5 (5-88)||(13278144-13278227)
chr5 (16-109)||(9083220-9083313)
chr5 (12-156)||(11907085-11907227)
chr5 (5-109)||(19229986-19230090)
chr5 (12-109)||(39135572-39135669)
chr5 (7-87)||(18654420-18654500)
chr5 (9-88)||(39350562-39350641)
chr5 (7-189)||(5163677-5163858)
chr5 (5-49)||(12372475-12372519)
chr5 (7-107)||(38602761-38602861)
chr5 (166-210)||(39291534-39291578)
[»] chr2 (13 HSPs)
chr2 (4-109)||(12364286-12364391)
chr2 (1-213)||(40542227-40542439)
chr2 (7-109)||(38593127-38593228)
chr2 (7-109)||(38596723-38596824)
chr2 (9-107)||(10330804-10330901)
chr2 (10-136)||(370837-370962)
chr2 (4-135)||(12365933-12366061)
chr2 (10-152)||(20921564-20921706)
chr2 (5-88)||(16602847-16602930)
chr2 (11-156)||(371889-372033)
chr2 (12-109)||(30178640-30178737)
chr2 (16-88)||(23833089-23833161)
chr2 (5-49)||(27892249-27892293)
[»] chr6 (21 HSPs)
chr6 (1-156)||(682315-682469)
chr6 (1-157)||(18497983-18498139)
chr6 (7-109)||(13561374-13561476)
chr6 (7-107)||(13562214-13562314)
chr6 (5-213)||(27719733-27719940)
chr6 (5-109)||(32348950-32349054)
chr6 (3-157)||(18499817-18499971)
chr6 (1-159)||(23638475-23638632)
chr6 (7-156)||(10673659-10673807)
chr6 (5-85)||(21094530-21094610)
chr6 (12-156)||(27107231-27107373)
chr6 (12-156)||(27149037-27149179)
chr6 (5-109)||(32713796-32713900)
chr6 (1-109)||(683454-683560)
chr6 (5-109)||(32347909-32348013)
chr6 (5-109)||(32712456-32712560)
chr6 (5-109)||(34995452-34995556)
chr6 (5-109)||(34996674-34996778)
chr6 (3-88)||(18230453-18230538)
chr6 (53-109)||(1692169-1692224)
chr6 (5-109)||(11801255-11801359)
[»] scaffold0041 (3 HSPs)
scaffold0041 (17-143)||(630-755)
scaffold0041 (1-189)||(1036-1223)
scaffold0041 (1-157)||(54690-54843)
[»] scaffold0065 (1 HSPs)
scaffold0065 (1-73)||(35494-35566)
[»] scaffold1337 (1 HSPs)
scaffold1337 (7-121)||(316-431)
[»] scaffold0349 (1 HSPs)
scaffold0349 (5-213)||(9155-9362)
[»] scaffold0009 (1 HSPs)
scaffold0009 (12-109)||(204633-204730)
[»] scaffold0141 (2 HSPs)
scaffold0141 (9-88)||(31155-31234)
scaffold0141 (4-109)||(35197-35302)
[»] scaffold0049 (2 HSPs)
scaffold0049 (9-88)||(83578-83657)
scaffold0049 (4-109)||(79510-79615)
[»] scaffold0013 (3 HSPs)
scaffold0013 (10-109)||(32198-32296)
scaffold0013 (7-109)||(27927-28030)
scaffold0013 (7-73)||(24726-24791)
[»] scaffold1425 (2 HSPs)
scaffold1425 (9-88)||(256-335)
scaffold1425 (9-109)||(1518-1618)
[»] scaffold0171 (1 HSPs)
scaffold0171 (1-46)||(29118-29163)
[»] scaffold0878 (1 HSPs)
scaffold0878 (5-49)||(2939-2983)


Alignment Details
Target: chr4 (Bit Score: 177; Significance: 1e-95; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 177; E-Value: 1e-95
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 17522018 - 17521794
Alignment:
Q  1 agtaaaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaatagga 100  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| |||||||| |||||||||||||| |||||||||    
T  17522018 agtataataaattaagtgttggtgatacactgttagatctcatagaccttgtttatccaatggtcttcttttttaggggattaaaattgacgaaatagga 17521919  T
Q  101 ccaaattgactgatagaaacacatataaaggaccaagttgaaaaatttaatagttatgacacatttttgaaaaagagaattaagttaagagaccgggtgt 200  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||||| || |||||||    
T  17521918 ccaaattgactgatggaaacacatataaaggaccaacttgaaaaatttaatagttatgacacagttttgaaaaagagaattcagttaagggatcgggtgt 17521819  T
Q  201 tcaattaagccttatttttattttt 225  Q
    |||||||||||||||||||||||||    
T  17521818 tcaattaagccttatttttattttt 17521794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 6 - 141
Target Start/End: Original strand, 5575427 - 5575562
Alignment:
Q  6 aataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaaa 105  Q
    |||||||||||| |||||||||||  |||||||| || ||||||| ||||||||| |||||||||||||| | |||||||||||| |||||||||| |||    
T  5575427 aataaattaagtattggtgatacatgattagatcacacagacctcctttatccaacggtctccttttttaggagattaaaattgacgaaataggactaaa 5575526  T
Q  106 ttgactgatagaaacacatataaaggaccaagttga 141  Q
    || || ||  ||||||||||||||||||||| ||||    
T  5575527 ttaaccgacggaaacacatataaaggaccaacttga 5575562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 3 - 157
Target Start/End: Original strand, 17522473 - 17522627
Alignment:
Q  3 taaaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggacc 102  Q
    |||||||||||| |||| ||||||||||| |||||||| ||||||||| ||| ||||| |||||||| ||||| | | ||||||||||||||||||||||    
T  17522473 taaaataaattaggtgtcggtgatacactcttagatcttatagacctcctttttccaacggtctcctgttttaggaggttaaaattgatgaaataggacc 17522572  T
Q  103 aaattgactgatagaaacacatataaaggaccaagttgaaaaatttaatagttat 157  Q
    ||  | || || ||||||||||||| ||   ||| ||||||| ||||||||||||    
T  17522573 aatgtaaccgacagaaacacatatatagtcacaacttgaaaattttaatagttat 17522627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 6 - 211
Target Start/End: Complemental strand, 5574405 - 5574200
Alignment:
Q  6 aataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaaa 105  Q
    |||||||||||| |||||||||||  ||||||||||  ||||||| ||||||||| ||||| |||||||| | |||||||||||| |||||||||| |||    
T  5574405 aataaattaagttttggtgatacatgattagatctctcagacctcctttatccaacggtcttcttttttaggagattaaaattgaggaaataggactaaa 5574306  T
Q  106 ttgactgatagaaacacatataaaggaccaagttgaaaaatttaatagttatgacacatttttgaaaaagagaattaagttaagagaccgggtgttcaat 205  Q
    || || ||  |||||||||||| | |||||| |||| |  ||||| || ||||  ||   ||| || || |||||||||||||| ||||||  | |||||    
T  5574305 ttaaccgactgaaacacatatacaagaccaacttgagacttttaaaagatatggtaccaatttaaataaaagaattaagttaagggaccggaggatcaat 5574206  T
Q  206 taagcc 211  Q
    ||||||    
T  5574205 taagcc 5574200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 6 - 156
Target Start/End: Original strand, 37642457 - 37642607
Alignment:
Q  6 aataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagg-gattaaaattgatgaaataggaccaa 104  Q
    ||||||| | ||||||||||||||| ||||||||| ||| ||||| |||||||||||||||||||||||  || | |||||||  |||||||||||||||    
T  37642457 aataaatcaggtgttggtgatacacaattagatctgataaacctcatttatccaatggtctccttttttttggaggttaaaatgaatgaaataggaccaa 37642556  T
Q  105 attgactgatagaaacacatataaaggaccaagttgaaaaatttaatagtta 156  Q
    ||||| |||| |||| | | ||||||||| |  ||||||  |||||||||||    
T  37642557 attgaatgatggaaaga-agataaaggactattttgaaacgtttaatagtta 37642607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 6 - 156
Target Start/End: Complemental strand, 54372945 - 54372796
Alignment:
Q  6 aataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaaa 105  Q
    ||||||| | |||||||||||||||  |||||||| ||||||||| ||||||||| ||||||||||| |  ||| |||||||  || |||||||||||||    
T  54372945 aataaatcaggtgttggtgatacacagttagatctaatagacctcatttatccaacggtctccttttcttgggggttaaaatgaataaaataggaccaaa 54372846  T
Q  106 ttgactgatagaaacacatataaaggaccaagttgaaaaatttaatagtta 156  Q
    |||| |||| |||| | | |||||||||||| ||| ||  |||||||||||    
T  54372845 ttgaatgatggaaaga-agataaaggaccaatttggaacgtttaatagtta 54372796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 3 - 119
Target Start/End: Original strand, 20945391 - 20945507
Alignment:
Q  3 taaaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggacc 102  Q
    |||||||||||| |||||||||||||||  |||||||| ||||| ||| ||||||||| ||||  |||||||| | | |||||||| |||||||||||||    
T  20945391 taaaataaattaggtgttggtgatacacagttagatctaatagaactcatttatccaacggtcctcttttttaggaggttaaaattaatgaaataggacc 20945490  T
Q  103 aaattgactgatagaaa 119  Q
    || |||| |||| ||||    
T  20945491 aagttgaatgatggaaa 20945507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 20 - 194
Target Start/End: Original strand, 21570354 - 21570527
Alignment:
Q  20 tggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaaattgactgatagaaa 119  Q
    ||||||||||| ||||||||| ||||||||| ||||||||| ||||| |||||| |  || |||||||| || |||||||| |||||||| ||||  |||    
T  21570354 tggtgatacacgattagatctgatagacctcctttatccaacggtcttctttttgagaggtttaaaattaataaaataggatcaaattga-tgatgaaaa 21570452  T
Q  120 cacatataaaggaccaagttgaaaaatttaatagttatgacacatttttgaaaaagagaattaagttaagagacc 194  Q
    || | ||||| |||||| ||||||  ||||||||||| |  ||   || |||||| |||||||||||||| ||||    
T  21570453 caaagataaatgaccaaattgaaacgtttaatagttaggggaccaattcgaaaaaaagaattaagttaagggacc 21570527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 6 - 136
Target Start/End: Original strand, 54373869 - 54373998
Alignment:
Q  6 aataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaaa 105  Q
    ||||||| | |||||||||||||||  |||||||| ||||||||| |||||||| |||||||||||| |  ||| |||||||  || |||||||||||||    
T  54373869 aataaatcaggtgttggtgatacacagttagatcttatagacctcatttatccagtggtctccttttcttgggggttaaaatgaataaaataggaccaaa 54373968  T
Q  106 ttgactgatagaaacacatataaaggaccaa 136  Q
    |||| |||| |||| | | ||||||||||||    
T  54373969 ttgaatgatggaaaga-agataaaggaccaa 54373998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 49923677 - 49923831
Alignment:
Q  1 agtaaaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctcctttt-ttaagggattaaaattgatgaaatagg 99  Q
    |||||||||||| | |||||||||||||||  |||||||| ||||||||| | ||||||| ||||||||||| || |||| |||||||  || |||||||    
T  49923677 agtaaaataaatcacgtgttggtgatacacagttagatctgatagacctcatctatccaacggtctccttttcttgaggg-ttaaaataaataaaatagg 49923775  T
Q  100 accaaattgactgatagaaacacatataaaggaccaagttgaaaaatttaatagtta 156  Q
     ||||||||| |||| ||||   | |||||||||||| ||||||  |||||||||||    
T  49923776 gccaaattgaatgat-gaaaagaagataaaggaccaatttgaaacgtttaatagtta 49923831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 7 - 109
Target Start/End: Complemental strand, 31204752 - 31204650
Alignment:
Q  7 ataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaaat 106  Q
    |||||||| |||||||||||||||| |||||||| || ||| || ||||||||| ||||| |||||| | | | |||||||| || ||||||||||||||    
T  31204752 ataaattatgtgttggtgatacactgttagatctgatggacatcctttatccaacggtcttctttttaaggagtttaaaattaataaaataggaccaaat 31204653  T
Q  107 tga 109  Q
    |||    
T  31204652 tga 31204650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 3 - 107
Target Start/End: Complemental strand, 20944478 - 20944374
Alignment:
Q  3 taaaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggacc 102  Q
    |||||||||||| |||||||||||||||  |||||||| ||||| ||| ||||||||| | ||  |||||||| | | |||||||| |||||||| ||||    
T  20944478 taaaataaattaggtgttggtgatacacggttagatctaatagatctcatttatccaacgatcctcttttttaggaggttaaaattaatgaaatatgacc 20944379  T
Q  103 aaatt 107  Q
    |||||    
T  20944378 aaatt 20944374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 109
Target Start/End: Original strand, 7261456 - 7261560
Alignment:
Q  5 aaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaa 104  Q
    |||||||||| |||||||||||||||||| | |||| ||||||||   | ||||||||||||  ||||||| ||||||||||||    |||| |||||||    
T  7261456 aaataaattaggtgttggtgatacactataaaatcttatagaccttcgtaatccaatggtctatttttttaggggattaaaattatcaaaattggaccaa 7261555  T
Q  105 attga 109  Q
    |||||    
T  7261556 attga 7261560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 109
Target Start/End: Original strand, 34095572 - 34095676
Alignment:
Q  5 aaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaa 104  Q
    |||||||||| |||| ||||||||||||| | |||| |||||||||  | || ||| |||||||||||||| ||||||||||||    |||| |||||||    
T  34095572 aaataaattaggtgtgggtgatacactataaaatctgatagacctccgtaattcaacggtctccttttttaggggattaaaattatcaaaattggaccaa 34095671  T
Q  105 attga 109  Q
    |||||    
T  34095672 attga 34095676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 109
Target Start/End: Original strand, 38032333 - 38032437
Alignment:
Q  5 aaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaa 104  Q
    |||||||||| |||||| ||||||||||| | |||| |||||||||  | |||||| |||||| ||||||| ||||||||||||    |||| |||||||    
T  38032333 aaataaattaggtgttgatgatacactataaaatctgatagacctccgtaatccaacggtctctttttttaggggattaaaattatcaaaattggaccaa 38032432  T
Q  105 attga 109  Q
    |||||    
T  38032433 attga 38032437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 5 - 88
Target Start/End: Complemental strand, 18091785 - 18091702
Alignment:
Q  5 aaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaatt 88  Q
    |||||||||| |||||||||||||||||| | |||| |||||||||  | || ||| |||||| ||||||||| ||||||||||    
T  18091785 aaataaattaggtgttggtgatacactataaaatctgatagacctctgtaattcaacggtctcattttttaagagattaaaatt 18091702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 212
Target Start/End: Original strand, 5470060 - 5470269
Alignment:
Q  3 taaaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggacc 102  Q
    |||||||||||| ||||  |||||| ||||| ||||||  |||||||  | ||||||| ||||| |||||| |   | |||||||| |  ||||| |||     
T  5470060 taaaataaattaggtgtgtgtgatatactataagatctggtagaccttttctatccaacggtcttctttttgagatggttaaaattaactaaataagact 5470159  T
Q  103 aaattgactgatagaaacacatataaaggaccaagttgaaaaatttaatagttatgacacatttttgaaaaagagaattaagttaagagaccgggtgttc 202  Q
    |||||||| |||  ||||| |||||||||||||  ||||||| |||||||||| ||  ||    ||||| ||  ||||||||||||| || |||  ||||    
T  5470160 aaattgacggatgaaaacatatataaaggaccacattgaaaattttaatagttttgggaccaacttgaataaatgaattaagttaagggatcggcagttc 5470259  T
Q  203 aattaagcct 212  Q
    ||||||||||    
T  5470260 aattaagcct 5470269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 88
Target Start/End: Complemental strand, 17356555 - 17356483
Alignment:
Q  16 gtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaatt 88  Q
    |||||||||||||||||| | |||| |||||||||  | |||||| |||||| ||||||| ||||||||||||    
T  17356555 gtgttggtgatacactataaaatctgatagacctccgtaatccaacggtctctttttttaggggattaaaatt 17356483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 109
Target Start/End: Complemental strand, 22622072 - 22621968
Alignment:
Q  5 aaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaa 104  Q
    |||||||||  |||| ||||||||||||| | |||| |||||||||  | |||||| |||||| ||||||| ||||||||||||    |||| |||||||    
T  22622072 aaataaattcggtgtcggtgatacactataaaatctgatagacctccgtaatccaacggtctctttttttaggggattaaaattatcaaaattggaccaa 22621973  T
Q  105 attga 109  Q
    |||||    
T  22621972 attga 22621968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 194
Target Start/End: Original strand, 31205627 - 31205813
Alignment:
Q  7 ataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaaat 106  Q
    |||||||| |||||||||||||||  |||||||| || || ||| |||||||||  |||| |||||| | | | |||||||| || ||||| ||||||||    
T  31205627 ataaattatgtgttggtgatacaccgttagatctgatggatctcctttatccaaatgtcttctttttaaggagtttaaaattaataaaatatgaccaaat 31205726  T
Q  107 tgactgatagaaacacatataaaggaccaagttgaaaaatttaatagttatgacacatttttgaaaaagagaattaagttaagagacc 194  Q
    | | | ||  ||||| | |||||||||||  ||||||  ||||||||||| |  ||   || |||||| |||||||||||||| ||||    
T  31205727 t-aataattaaaacaaagataaaggaccattttgaaacgtttaatagttaggggaccaattcgaaaaaaagaattaagttaagggacc 31205813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 5547117 - 5547044
Alignment:
Q  1 agtaaaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctcctttttt 74  Q
    ||||||||||||   ||||||||||| |||  |||||||| |||||| || ||||||||| |||||||||||||    
T  5547117 agtaaaataaatctggtgttggtgattcacacttagatctgatagacgtcatttatccaacggtctcctttttt 5547044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 156
Target Start/End: Complemental strand, 21569444 - 21569300
Alignment:
Q  11 attaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaaattgac 110  Q
    |||| ||||| |||||||||| |||||||| || |||||| ||||||||| ||||| |||||| |  || |||||||| || ||||| ||  |||| ||     
T  21569444 attaggtgttagtgatacactgttagatctgatggacctcctttatccaacggtcttctttttgagaggtttaaaattaataaaatatgattaaataga- 21569346  T
Q  111 tgatagaaacacatataaaggaccaagttgaaaaatttaatagtta 156  Q
    ||||  ||||| | ||||| |||||| ||||||  |||||||||||    
T  21569345 tgatgaaaacaaagataaatgaccaaattgaaacgtttaatagtta 21569300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 109
Target Start/End: Original strand, 22623056 - 22623160
Alignment:
Q  5 aaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaa 104  Q
    ||||||||||  ||||||||||||| ||| | |||| |||||||||  | |||||| |||||| |||| || ||||||||||||    |||| |||||||    
T  22623056 aaataaattagatgttggtgatacattataaaatctgatagacctccgtaatccaacggtctctttttgtaggggattaaaattatcaaaattggaccaa 22623155  T
Q  105 attga 109  Q
    |||||    
T  22623156 attga 22623160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 109
Target Start/End: Complemental strand, 38031373 - 38031269
Alignment:
Q  5 aaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaa 104  Q
    |||||||||| |||||| ||||||||||| | |||| |||||||||  | || ||| |||||  ||||||| ||||||||||||    |||| |||||||    
T  38031373 aaataaattaggtgttgatgatacactataaaatctgatagacctccgtaattcaacggtctttttttttatgggattaaaattatcaaaattggaccaa 38031274  T
Q  105 attga 109  Q
    |||||    
T  38031273 attga 38031269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 49922711 - 49922561
Alignment:
Q  1 agtaaaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctcctttt-ttaagggattaaaattgatgaaatagg 99  Q
    |||||||||||| | ||||||||| |||||  |||||||| ||||||||| | ||||||| |||||| |||| || |||| |||||||  || |||||||    
T  49922711 agtaaaataaatcatgtgttggtgctacacagttagatctgatagacctcatctatccaacggtctcattttcttgaggg-ttaaaatgaataaaatagg 49922613  T
Q  100 accaaattgactgatagaaacacatataaaggaccaagttgaaaaatttaata 152  Q
      |||||||| ||| ||||| | | ||||| |||||| ||||||  |||||||    
T  49922612 gtcaaattgaatgacagaaaga-agataaaagaccaatttgaaatgtttaata 49922561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 60
Target Start/End: Original strand, 34122734 - 34122789
Alignment:
Q  5 aaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaa 60  Q
    |||||||| |||||||||||||||||||| |||||| ||||| |||  ||||||||    
T  34122734 aaataaatcaagtgttggtgatacactataagatctgatagatctcccttatccaa 34122789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 219
Target Start/End: Complemental strand, 4373458 - 4373364
Alignment:
Q  125 ataaaggaccaagttgaaaaatttaatagttatgacacatttttgaaaaagagaattaagttaagagaccgggtgttcaattaagccttattttt 219  Q
    ||||||||||   |||||| |||| |||||||||| ||  |||||||| | |||||||||||||| |||||  || |||||||| |||| |||||    
T  4373458 ataaaggaccggattgaaatattttatagttatgagactattttgaaataaagaattaagttaagggaccgaatgatcaattaaacctttttttt 4373364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 143
Target Start/End: Original strand, 46425918 - 46426055
Alignment:
Q  6 aataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaaa 105  Q
    |||||||||  ||||||| ||||||  ||| |||| || |||||| |||||||||  ||||||||||||| ||  |||||||| | |||||| || ||||    
T  46425918 aataaattagatgttggttatacaccgttaaatctgatggacctcctttatccaacagtctccttttttagggagttaaaattaacgaaatatga-caaa 46426016  T
Q  106 ttgactga-tagaaacacatataaaggaccaagttgaaa 143  Q
    ||||| || |  || ||||||||||| ||||| ||||||    
T  46426017 ttgacagacttaaaccacatataaagaaccaaattgaaa 46426055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 158
Target Start/End: Complemental strand, 54822575 - 54822426
Alignment:
Q  8 taaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaaatt 107  Q
    ||||||| ||||||||||||||   |||||||  || |||||| |||||||||  |||| ||||||   ||  |||||||| || |||||||| ||||||    
T  54822575 taaattatgtgttggtgatacatggttagatccaatggacctcctttatccaacagtcttctttttgttggatttaaaattaataaaataggatcaaatt 54822476  T
Q  108 gactgatagaaacacatataaaggaccaagttgaaaaatttaatagttatg 158  Q
    || |||   ||||| |||||||||||||  ||||||  || ||||||||||    
T  54822475 ga-tgactaaaacaaatataaaggaccattttgaaacgttcaatagttatg 54822426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 109
Target Start/End: Complemental strand, 10803094 - 10802990
Alignment:
Q  5 aaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaa 104  Q
    |||||||||  |||||||||||||| ||| | |||| ||| |||||  | |||||| |||||| ||||||| || |||||||||    |||| |||||||    
T  10803094 aaataaattcggtgttggtgatacaatataaaatctgataaacctccgtaatccaacggtctctttttttagggtattaaaattatcaaaattggaccaa 10802995  T
Q  105 attga 109  Q
    |||||    
T  10802994 attga 10802990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 110
Target Start/End: Complemental strand, 46425827 - 46425724
Alignment:
Q  6 aataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaaa 105  Q
    ||||||||| |||||||||||||||  ||| |||| || |||||| ||||||||| | |||  ||||||| ||  |||||||| |||||| ||||  |||    
T  46425827 aataaattaggtgttggtgatacac-gttaaatctgattgacctcctttatccaacgatctttttttttatggagttaaaattaatgaaacaggattaaa 46425729  T
Q  106 ttgac 110  Q
    |||||    
T  46425728 ttgac 46425724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 89; Significance: 5e-43; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 6 - 213
Target Start/End: Complemental strand, 51088735 - 51088527
Alignment:
Q  6 aataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaaa 105  Q
    ||||||||||||||||||||||||  ||||||| ||| ||||||| ||||||||| |||||||||||||| | |||||||||||| |||||||||| |||    
T  51088735 aataaattaagtgttggtgatacatgattagatatcacagacctcctttatccaacggtctccttttttaggagattaaaattgacgaaataggactaaa 51088636  T
Q  106 ttgactgatagaaacacatataaaggaccaagttgaaaaatttaatagttatgaca-catttttgaaaaagagaattaagttaagagaccgggtgttcaa 204  Q
    || || ||  ||||||||||||||||||||| |||| |  ||||| || ||||| | || |||  ||||| |||||||||||||| ||||||  ||||||    
T  51088635 ttaaccgacggaaacacatataaaggaccaacttgagacttttaaaagatatgagaccaatttaaaaaaaaagaattaagttaagggaccggaggttcaa 51088536  T
Q  205 ttaagcctt 213  Q
    |||||||||    
T  51088535 ttaagcctt 51088527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 3 - 212
Target Start/End: Original strand, 51694414 - 51694621
Alignment:
Q  3 taaaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggacc 102  Q
    |||||||||||| |||||||||||||||| ||| |  |||| || ||| ||||||||| |||||||||||| |   |||||||||||| ||||||||||     
T  51694414 taaaataaattaggtgttggtgatacactgttaaaa-tcatggatctcttttatccaacggtctcctttttcagaagattaaaattgacgaaataggact 51694512  T
Q  103 aaattgactgatagaaacacatataaaggaccaagttgaaaaatttaatagttatgacacatttttgaaaaagagaattaagttaagagaccgggtgttc 202  Q
    |||| |||  |  |||||| |||||||||||||| ||||| | ||||| ||||||   ||   |||||| || |||||||||||||| ||||||||||||    
T  51694513 aaatggac-aacggaaacatatataaaggaccaacttgaacattttaagagttataggaccaatttgaagaaaagaattaagttaagggaccgggtgttc 51694611  T
Q  203 aattaagcct 212  Q
    ||||||||||    
T  51694612 aattaagcct 51694621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 40722945 - 40723155
Alignment:
Q  1 agtaaaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaatagga 100  Q
    |||| ||||||||| |||||| ||||||||  ||| |||| || |||||| |||||| ||  ||||| ||||||| ||  |||||||| |||||||||||    
T  40722945 agtagaataaattaggtgttgatgatacaccgttaaatctgatggacctcctttatctaacagtctctttttttagggagttaaaattaatgaaatagga 40723044  T
Q  101 ccaaattgactgatagaaacacatataaaggaccaagttgaaaaatttaatagttatgacacatttttgaaaaagagaattaagttaagagaccgggtgt 200  Q
    |||||||||||||| |  ||| |||||||||||||| ||||||  ||||| ||||||   |    ||||||||| |||||||||||||  ||||||| ||    
T  40723045 ccaaattgactgattg-cacatatataaaggaccaaattgaaacttttaaaagttataggatcaatttgaaaaaaagaattaagttaaaggaccgggagt 40723143  T
Q  201 tcaattaagcct 212  Q
    ||||||||||||    
T  40723144 tcaattaagcct 40723155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 20 - 214
Target Start/End: Original strand, 51089741 - 51089935
Alignment:
Q  20 tggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaaattgactgatagaaa 119  Q
    ||||||||||  ||||||||||| ||||||  ||||||||| |||||||||||||| | |||||||||||   ||||||||| ||||| || ||  ||||    
T  51089741 tggtgatacatgattagatctcacagaccttctttatccaacggtctccttttttaggagattaaaattggcaaaataggactaaattaacggacggaaa 51089840  T
Q  120 cacatataaaggaccaagttgaaaaatttaatagttatgacacatttttgaaaaagagaattaagttaagagaccgggtgttcaattaagcctta 214  Q
    ||||||||||||||||| |||| |  ||||| || ||||  ||   ||| ||||| |||||||||||||| ||||||  | ||||||||||||||    
T  51089841 cacatataaaggaccaacttgagacttttaaaagatatgggaccaattttaaaaaaagaattaagttaagggaccggaggatcaattaagcctta 51089935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 49618635 - 49618517
Alignment:
Q  1 agtaaaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaatagga 100  Q
    |||||||||||| ||||||||||||||| |  |||||||| ||||||||| ||||||||| |||||||||||||  ||| |||||||  || ||||| ||    
T  49618635 agtaaaataaatcaagtgttggtgatactcagttagatctgatagacctcatttatccaacggtctcctttttttgggggttaaaatgaataaaatatga 49618536  T
Q  101 ccaaattgactgatagaaa 119  Q
    ||||||||| |||| ||||    
T  49618535 ccaaattgaatgatggaaa 49618517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 40721988 - 40721847
Alignment:
Q  1 agtaaaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaaggga-ttaaaattgatgaaatagg 99  Q
    |||| ||||||||| |||||| ||||||||  ||| |||| || |||||| ||||||||| | ||||||||||  ||| | |||||||| | ||||||||    
T  40721988 agtagaataaattaggtgttgatgatacaccgttaaatctaatggacctcctttatccaacgatctccttttt--aggaagttaaaattaacgaaatagg 40721891  T
Q  100 accaaattgactgatagaaacacatataaaggaccaagttgaaa 143  Q
    ||||||||||| ||   |||||||||||||||||||| ||||||    
T  40721890 accaaattgaccgacttaaacacatataaaggaccaaattgaaa 40721847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 49619730 - 49619885
Alignment:
Q  1 agtaaaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaata-gg 99  Q
    |||||||||||| | |||||||||||||||  ||| |||| ||||||||| |||||| ||||||||||||||||   || |||||||  || ||| | ||    
T  49619730 agtaaaataaatcaggtgttggtgatacacagttaaatctgatagacctcatttatctaatggtctccttttttttagggttaaaatgaataaaaaaagg 49619829  T
Q  100 accaaattgactgatagaaacacatataaaggaccaagttgaaaaatttaatagtta 156  Q
    |||||||||| |||| |||| | | |||||||||||| ||| ||  |||||||||||    
T  49619830 accaaattgaatgatggaaaga-agataaaggaccaatttggaacgtttaatagtta 49619885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 45042813 - 45042659
Alignment:
Q  1 agtaaaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaatagga 100  Q
    ||||||||||||||  ||||| ||||||||  |||||||| ||| ||||| ||||||||| |||||||||||| || |  |||||||| |  ||||| ||    
T  45042813 agtaaaataaattagatgttgatgatacacggttagatctgatatacctcatttatccaacggtctcctttttaaatgagttaaaattaacaaaatatga 45042714  T
Q  101 ccaaattgactgatagaaacacatataaaggaccaagttgaaaaatttaatagtta 156  Q
    ||||||| ||| | | ||||| | ||||| |||||| |||||| |||||| |||||    
T  45042713 ccaaatttactaaca-aaacatagataaaagaccaatttgaaacatttaacagtta 45042659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 52439197 - 52439351
Alignment:
Q  1 agtaaaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaatagga 100  Q
    |||||| ||||||| |||||||||||||||  |||||||| |||||| || ||||||||| | ||||||||||   ||  |||||||  || |||||| |    
T  52439197 agtaaagtaaattaggtgttggtgatacacagttagatctgatagacttcatttatccaacgatctcctttttatgggtgttaaaatgaataaaatagaa 52439296  T
Q  101 ccaaattgactgatagaaacacatataaaggaccaagttgaaaaatttaatagtta 156  Q
    ||||||||| |||| |||| | | |||||||| ||| ||||||  |||||||||||    
T  52439297 ccaaattgaatgatggaaaga-agataaaggatcaatttgaaacgtttaatagtta 52439351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 109
Target Start/End: Original strand, 5488778 - 5488884
Alignment:
Q  3 taaaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggacc 102  Q
    |||||||||||| |||||||||||||||||| | || | |||||||||  | |||||| |||||| |||| |||||||||||||||    |||| |||||    
T  5488778 taaaataaattaggtgttggtgatacactataaaatttgatagacctccgtaatccaacggtctctttttctaagggattaaaattatcaaaattggacc 5488877  T
Q  103 aaattga 109  Q
    |||||||    
T  5488878 aaattga 5488884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 40778576 - 40778468
Alignment:
Q  1 agtaaaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctcctttt-ttaagggattaaaattgatgaaatagg 99  Q
    |||||||||||| | |||  ||||||||||  |||||||| ||||||||| ||||||||| ||||||||||| || |||| |||||||  || |||||||    
T  40778576 agtaaaataaatcaggtgccggtgatacacagttagatctaatagacctcatttatccaacggtctccttttcttgaggg-ttaaaataaataaaatagg 40778478  T
Q  100 accaaattga 109  Q
    ||||||||||    
T  40778477 accaaattga 40778468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 109
Target Start/End: Original strand, 7111388 - 7111492
Alignment:
Q  5 aaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaa 104  Q
    |||||||||| |||||| ||||||||||| | |||| |||||||||  | |||||| |||||| ||||||| ||||||||||||    |||| |||||||    
T  7111388 aaataaattaggtgttgatgatacactataaaatctgatagacctccgtaatccaacggtctctttttttaggggattaaaattatcaaaattggaccaa 7111487  T
Q  105 attga 109  Q
    |||||    
T  7111488 attga 7111492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 9 - 88
Target Start/End: Complemental strand, 5488702 - 5488623
Alignment:
Q  9 aaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaatt 88  Q
    |||||| |||||||||||||||||| | |||| |||||||||  | |||||| |||||| |||| |||||||||||||||    
T  5488702 aaattacgtgttggtgatacactataaaatctgatagacctccgtaatccaacggtctctttttctaagggattaaaatt 5488623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 2 - 109
Target Start/End: Original strand, 40779556 - 40779663
Alignment:
Q  2 gtaaaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggac 101  Q
    ||||||||||| | ||||||||||||||| | | ||| | |||||||||  |||||||| |||||||||||||  ||| |||||||  || |||||||||    
T  40779556 gtaaaataaatcaggtgttggtgatacacaaattgatatgatagacctcacttatccaacggtctcctttttttgggggttaaaatgaataaaataggac 40779655  T
Q  102 caaattga 109  Q
    ||| ||||    
T  40779656 caacttga 40779663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 5 - 88
Target Start/End: Complemental strand, 52759568 - 52759485
Alignment:
Q  5 aaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaatt 88  Q
    |||||||||| |||||||||||||||||| | |||| |||||||||  | || ||| |||||| ||||||||| ||||||||||    
T  52759568 aaataaattaggtgttggtgatacactataaaatctgatagacctctgtaattcaacggtctcattttttaagagattaaaatt 52759485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 7 - 73
Target Start/End: Complemental strand, 18655645 - 18655579
Alignment:
Q  7 ataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttt 73  Q
    |||||||| |||||||| |||||||||||||||| || |||||| ||||||||| ||||| ||||||    
T  18655645 ataaattatgtgttggttatacactattagatctaatggacctcctttatccaacggtcttcttttt 18655579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 109
Target Start/End: Complemental strand, 45228480 - 45228376
Alignment:
Q  5 aaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaa 104  Q
    |||||||||||| ||| |||||||||||| | || | ||||| |||  | |||||| |||||| ||||||| ||||||||||||  | |||| |||||||    
T  45228480 aaataaattaagcgtttgtgatacactataaaatttgatagatctccgtaatccaacggtctctttttttaggggattaaaattattaaaattggaccaa 45228381  T
Q  105 attga 109  Q
    |||||    
T  45228380 attga 45228376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 50484913 - 50485013
Alignment:
Q  9 aaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaaattg 108  Q
    |||||| |||||||||||||||| | | |||| ||||||||   | ||||||||||||| ||||||| ||||||||||||    |||| |||||||||||    
T  50484913 aaattaggtgttggtgatacactgtaaaatctgatagacctatgtaatccaatggtctctttttttaggggattaaaattatcaaaattggaccaaattg 50485012  T
Q  109 a 109  Q
    |    
T  50485013 a 50485013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 109
Target Start/End: Original strand, 52761509 - 52761613
Alignment:
Q  5 aaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaa 104  Q
    |||||||||| |||||||||||||||||| | |||| |||||||||    |||||| |||||| ||||| | ||||||||||||    |||| |||||||    
T  52761509 aaataaattaggtgttggtgatacactataaaatctgatagacctccgcaatccaacggtctcttttttcaggggattaaaattatcaaaattggaccaa 52761608  T
Q  105 attga 109  Q
    |||||    
T  52761609 attga 52761613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 88
Target Start/End: Complemental strand, 51693352 - 51693269
Alignment:
Q  5 aaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaatt 88  Q
    |||||||||| |||||||||||||||||| | |||  |||||||||  | |||||| |||||| ||||||| || |||||||||    
T  51693352 aaataaattaggtgttggtgatacactataaaatccgatagacctccgtaatccaacggtctctttttttagggtattaaaatt 51693269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 109
Target Start/End: Complemental strand, 40187796 - 40187703
Alignment:
Q  16 gtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaaattga 109  Q
    ||||||||||||||| || | |||| |||||||||  | |||||| |||||| ||||||| ||||||||||||    |||| ||||||||||||    
T  40187796 gtgttggtgatacacgataaaatctgatagacctccgtaatccaacggtctctttttttaggggattaaaattataaaaattggaccaaattga 40187703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 109
Target Start/End: Original strand, 51468814 - 51468918
Alignment:
Q  5 aaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaa 104  Q
    |||||||||| |||||||||||||||| | | |||| ||||| |||  | |||||||| | |  ||||||| ||||||||||||  | |||| |||||||    
T  51468814 aaataaattaggtgttggtgatacactgtaaaatctaatagatctccgtaatccaatgctttttttttttaggggattaaaattattaaaattggaccaa 51468913  T
Q  105 attga 109  Q
    |||||    
T  51468914 attga 51468918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 88
Target Start/End: Complemental strand, 21203216 - 21203133
Alignment:
Q  5 aaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaatt 88  Q
    |||||||||| |||||| ||||||||||| | |||| ||||||||   | |||||| |||||| ||||||| ||||||| ||||    
T  21203216 aaataaattaggtgttgatgatacactataaaatctgatagacctttgtaatccaacggtctctttttttaggggattagaatt 21203133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 106
Target Start/End: Original strand, 21246399 - 21246493
Alignment:
Q  12 ttaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaaat 106  Q
    |||||||||||||||||||  |||||| | ||  || || ||||||||| ||||| |||||||| ||  || ||||| || ||||||||||||||    
T  21246399 ttaagtgttggtgatacacggttagatatgatgaacttcctttatccaacggtcttcttttttatggattttaaattaataaaataggaccaaat 21246493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 189
Target Start/End: Complemental strand, 9850166 - 9849986
Alignment:
Q  8 taaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaaatt 107  Q
    ||||||| ||||||||||||||   |||||||  || |||||| ||| | ||| ||||| ||||||   ||  |||||||| || |||||||| ||||||    
T  9850166 taaattatgtgttggtgatacatggttagatccaattgacctccttttttcaacggtcttctttttgttggatttaaaattaataaaataggatcaaatt 9850067  T
Q  108 gactgatagaaacacatataaaggaccaagttgaaaaatttaatagttatgacacatttttgaaaaagagaattaagttaag 189  Q
    || |||   ||||| |||||||||||||  ||||||  || ||||||||||  ||   || |||||| ||||||||||||||    
T  9850066 ga-tgactaaaacaaatataaaggaccattttgaaacgttcaatagttatgggaccaattcgaaaaaaagaattaagttaag 9849986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 109
Target Start/End: Complemental strand, 7110431 - 7110327
Alignment:
Q  5 aaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaa 104  Q
    |||||||||| | |||| ||||||||||| | |||| |||||||||    |||||| | |||| ||||||| ||||||||||||    |||| |||||||    
T  7110431 aaataaattaggcgttgatgatacactataaaatctgatagacctccgcaatccaacgatctctttttttaggggattaaaattatcaaaattggaccaa 7110332  T
Q  105 attga 109  Q
    |||||    
T  7110331 attga 7110327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 82; Significance: 7e-39; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 3 - 212
Target Start/End: Original strand, 19218895 - 19219103
Alignment:
Q  3 taaaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggacc 102  Q
    |||||||||||| |||||||||||||||| ||| ||||||| |||||| ||||||||| |||||||||||| |  ||||||||||||| ||||||||||     
T  19218895 taaaataaattaggtgttggtgatacactgttaaatctcatggacctcttttatccaacggtctcctttttcagaggattaaaattgacgaaataggact 19218994  T
Q  103 aaattgactgatagaaacacatataaaggaccaagttgaaaaatttaatagttatgacacatttttgaaaaagagaattaagttaagagaccgggtgttc 202  Q
    |||| |||  |  |||||| |||||||||||||| ||||| | ||||| ||||||   ||   |||||| || ||||||||||| || ||||||||||||    
T  19218995 aaatggac-cacggaaacatatataaaggaccaacttgaacattttaagagttataggaccaatttgaagaaaagaattaagttcagggaccgggtgttc 19219093  T
Q  203 aattaagcct 212  Q
    ||||||||||    
T  19219094 aattaagcct 19219103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 6 - 211
Target Start/End: Original strand, 24653584 - 24653789
Alignment:
Q  6 aataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaaa 105  Q
    ||||||||||||||||||||||||   |||||||||  ||||||| ||||||||| |||||||||||||| | |||||||||||| |||||||||| |||    
T  24653584 aataaattaagtgttggtgatacatggttagatctcccagacctcctttatccaacggtctccttttttaggagattaaaattgacgaaataggactaaa 24653683  T
Q  106 ttgactgatagaaacacatataaaggaccaagttgaaaaatttaatagttatgacacatttttgaaaaagagaattaagttaagagaccgggtgttcaat 205  Q
    || || ||  |||||||||||||| |||||| |||| |  ||||| || ||||  ||   ||| || || |||||||||||||| ||||||  | |||||    
T  24653684 ttaaccgacggaaacacatataaatgaccaacttgagacttttaaaagatatgggaccaatttaaataaaagaattaagttaagggaccggaggatcaat 24653783  T
Q  206 taagcc 211  Q
    ||||||    
T  24653784 taagcc 24653789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 10 - 194
Target Start/End: Original strand, 47536771 - 47536954
Alignment:
Q  10 aattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaaattga 109  Q
    ||||| ||||||||||||||| ||||||||| ||||||||| ||||||||| ||||| |||||| |   | |||||||  || |||||||||||||||||    
T  47536771 aattaggtgttggtgatacaccattagatctgatagacctcttttatccaacggtcttctttttgagaagtttaaaatcaataaaataggaccaaattga 47536870  T
Q  110 ctgatagaaacacatataaaggaccaagttgaaaaatttaatagttatgacacatttttgaaaaagagaattaagttaagagacc 194  Q
     ||||| ||||| | |||||||||||| || ||   ||||||||||| |  ||   || |||||| |||||||||||||| ||||    
T  47536871 -tgataaaaacaaagataaaggaccaatttaaagtgtttaatagttaggggaccaattcgaaaaaaagaattaagttaagggacc 47536954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 6 - 196
Target Start/End: Complemental strand, 24651718 - 24651528
Alignment:
Q  6 aataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaaa 105  Q
    ||||||||| || ||  |||||||  ||||||||||| | ||||| | |||||||  ||||||| ||||| | |||||||||||| |||||| ||| |||    
T  24651718 aataaattaggtattaatgatacatgattagatctcacaaacctcctgtatccaacagtctcctcttttaggagattaaaattgacgaaatatgactaaa 24651619  T
Q  106 ttgactgatagaaacacatataaaggaccaagttgaaaaatttaatagttatgacacatttttgaaaaagagaattaagttaagagaccgg 196  Q
    || || ||  ||||||||||||||||||||| |||| || ||||| || ||||  ||   ||| ||||| |||||||||||||| ||||||    
T  24651618 ttaaccgacggaaacacatataaaggaccaacttgagaattttaaaagatatgggaccaatttaaaaaaaagaattaagttaagggaccgg 24651528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 7 - 109
Target Start/End: Complemental strand, 42520419 - 42520317
Alignment:
Q  7 ataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaaat 106  Q
    |||||||| |||||||||||||||  |||||||| ||||||||| ||||||||| ||||| |||||| | ||| ||||||||||| ||||| ||| ||||    
T  42520419 ataaattatgtgttggtgatacaccgttagatctgatagacctcctttatccaacggtctactttttaatgggtttaaaattgataaaatatgacaaaat 42520320  T
Q  107 tga 109  Q
    |||    
T  42520319 tga 42520317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 4 - 109
Target Start/End: Original strand, 22794237 - 22794342
Alignment:
Q  4 aaaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggacca 103  Q
    ||||||||| |  |||||||||||||| ||||||||| ||||||||| ||||||||| | |||||||||||  ||| |||||||  || |||||||||||    
T  22794237 aaaataaatcagatgttggtgatacacaattagatctgatagacctcatttatccaacgatctcctttttttgggggttaaaatgaataaaataggacca 22794336  T
Q  104 aattga 109  Q
    ||||||    
T  22794337 aattga 22794342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 16 - 156
Target Start/End: Complemental strand, 29408435 - 29408296
Alignment:
Q  16 gtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaaattgactgata 115  Q
    |||||||||||||||  |||||||| ||||||||| ||||||||||||||| |||||| || |  |||||||| |  ||||| ||| ||||| ||| | |    
T  29408435 gtgttggtgatacaccgttagatctgatagacctcatttatccaatggtctactttttaaatgagttaaaattaacaaaatatgactaaatttactaaca 29408336  T
Q  116 gaaacacatataaaggaccaagttgaaaaatttaatagtta 156  Q
     ||||||| ||||| |||||| |||||| |||| |||||||    
T  29408335 -aaacacagataaatgaccaatttgaaacattttatagtta 29408296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 88
Target Start/End: Complemental strand, 29186869 - 29186786
Alignment:
Q  5 aaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaatt 88  Q
    |||||||||| |||||||||||||||||| | |||| |||||||||  | |||| | |||||| ||||||||||||||||||||    
T  29186869 aaataaattaggtgttggtgatacactataaaatctgatagacctccgtaatcctacggtctcattttttaagggattaaaatt 29186786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 156
Target Start/End: Original strand, 29409154 - 29409304
Alignment:
Q  5 aaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaa 104  Q
    |||||||||| |||||||| ||||||| |||||||| ||||| ||| ||||||||| |||||||||||| || |  |||||||| |  ||||| ||||||    
T  29409154 aaataaattaggtgttggttatacactgttagatctgatagatctcatttatccaacggtctcctttttaaatgagttaaaattaacaaaatatgaccaa 29409253  T
Q  105 attgactgatagaaacacatataaaggaccaagttgaaaaatttaatagtta 156  Q
    ||| ||| | | ||| ||| ||||| |||||| |||| | |||| |||||||    
T  29409254 atttactaaca-aaatacagataaatgaccaatttgagacattttatagtta 29409304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 29658526 - 29658599
Alignment:
Q  1 agtaaaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctcctttttt 74  Q
    |||||||||||| | | ||||||| ||||| ||||||||| ||||||||  |||||||||||||||||||||||    
T  29658526 agtaaaataaatcaggcgttggtggtacacaattagatctgatagaccttatttatccaatggtctcctttttt 29658599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 6 - 119
Target Start/End: Complemental strand, 32893656 - 32893543
Alignment:
Q  6 aataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaaa 105  Q
    ||||||| |||||||||||||||||  |||||||| ||||||| |  |||||||| ||||||||||| |  ||| |||||||  || ||||| |||||||    
T  32893656 aataaatcaagtgttggtgatacacagttagatctgatagaccacacttatccaacggtctccttttcttgggggttaaaatgaataaaataagaccaaa 32893557  T
Q  106 ttgactgatagaaa 119  Q
    |||| |||| ||||    
T  32893556 ttgaatgatggaaa 32893543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 7 - 156
Target Start/End: Complemental strand, 40321267 - 40321119
Alignment:
Q  7 ataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaaat 106  Q
    |||||||| |||||||||||||||| |||||||| || |||||| ||||||||| ||||| |||||| | |   |||||||| || ||| ||| ||||||    
T  40321267 ataaattatgtgttggtgatacactgttagatctaatggacctcctttatccaacggtcttctttttaatgattttaaaattaataaaaaaggcccaaat 40321168  T
Q  107 tgactgatagaaacacatataaaggaccaagttgaaaaatttaatagtta 156  Q
    ||| ||||  ||||| | |||||||| ||  ||||||  |||||||||||    
T  40321167 tga-tgattaaaacaaagataaaggatcattttgaaacgtttaatagtta 40321119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 90
Target Start/End: Complemental strand, 32518616 - 32518532
Alignment:
Q  6 aataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattga 90  Q
    ||||||||| |||||||||||||||||| | |||| |||||||||  | |||||| |||||  ||||||| ||||||||||||||    
T  32518616 aataaattaggtgttggtgatacactataaaatctgatagacctccgtaatccaacggtctttttttttaggggattaaaattga 32518532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 109
Target Start/End: Complemental strand, 43113879 - 43113775
Alignment:
Q  5 aaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaa 104  Q
    |||||||||| ||| |||||||||||||| | |||| |||||||||  | |||||| |||||| ||||||| ||||||||||||    |||| |||||||    
T  43113879 aaataaattaggtgctggtgatacactataaaatctgatagacctctgtaatccaacggtctctttttttaggggattaaaattatcaaaattggaccaa 43113780  T
Q  105 attga 109  Q
    |||||    
T  43113779 attga 43113775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 36396017 - 36395874
Alignment:
Q  1 agtaaaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaaggga-ttaaaattgatgaaatagg 99  Q
    |||| |||||||||  ||||||||||||||| ||| |||| || || ||| |||||||||  ||||  ||||||||| || |||||||| |  |||||||    
T  36396017 agtataataaattagatgttggtgatacactgttaaatctgatggatctcctttatccaaccgtctttttttttaagagagttaaaattaacaaaatagg 36395918  T
Q  100 accaaattgactgatagaaacacatataaaggaccaagttgaaa 143  Q
    || |||||||| ||   ||||||||||||| |||||| ||||||    
T  36395917 actaaattgacagacttaaacacatataaaagaccaaattgaaa 36395874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 22 - 189
Target Start/End: Complemental strand, 47535842 - 47535676
Alignment:
Q  22 gtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaaattgactgatagaaaca 121  Q
    |||||||||  |||||||| || || ||| |||||||||  |||  |||||| |  || |||||||| || ||||||||||||||||| ||||| |||||    
T  47535842 gtgatacaccgttagatctgatggatctcctttatccaacagtcatctttttgagaggtttaaaattaataaaataggaccaaattga-tgataaaaaca 47535744  T
Q  122 catataaaggaccaagttgaaaaatttaatagttatgacacatttttgaaaaagagaattaagttaag 189  Q
     | |||||||||||| ||||||  ||||||||||| |  ||   ||||||||| |||||||| |||||    
T  47535743 aagataaaggaccaaattgaaacgtttaatagttaggggactaatttgaaaaaaagaattaaattaag 47535676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 7 - 73
Target Start/End: Complemental strand, 35044818 - 35044752
Alignment:
Q  7 ataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttt 73  Q
    |||||||| |||||||||||||||| |||||||| || |||||| ||||||||| ||||| ||||||    
T  35044818 ataaattatgtgttggtgatacactcttagatctaatggacctcctttatccaacggtcttcttttt 35044752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 7 - 213
Target Start/End: Original strand, 36584823 - 36585028
Alignment:
Q  7 ataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaaat 106  Q
    |||||||| ||||||||||| |||| |||||| | || |||||| ||||||||| ||||| | |||| | ||  |||||||| || ||||| ||||||||    
T  36584823 ataaattatgtgttggtgatccactcttagatataatggacctcctttatccaacggtcttcgttttaagggctttaaaattaataaaatatgaccaaat 36584922  T
Q  107 tgactgatagaaacacatataaaggaccaagttgaaaaatttaatagttatgacacatttttgaaaaagagaattaagttaagagaccgggtgttcaatt 206  Q
    ||| |||   ||| | | |||||||||||  ||||||  ||||||||||| |  ||   || |||||| |||||||||||||| ||||   || ||||||    
T  36584923 tga-tgactaaaataaagataaaggaccattttgaaatgtttaatagttaggggaccaattcgaaaaaaagaattaagttaagggaccaaatgatcaatt 36585021  T
Q  207 aagcctt 213  Q
    |||||||    
T  36585022 aagcctt 36585028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 7 - 109
Target Start/End: Original strand, 42521176 - 42521278
Alignment:
Q  7 ataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaaat 106  Q
    |||| ||| |||||||||||||||| |||||||  || |||||| ||||||||| |||||  ||||| | |   ||||||||||| ||||||||||||||    
T  42521176 ataagttatgtgttggtgatacactgttagatccgatggacctcctttatccaacggtcttatttttaaggattttaaaattgataaaataggaccaaat 42521275  T
Q  107 tga 109  Q
    |||    
T  42521276 tga 42521278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 4973961 - 4974069
Alignment:
Q  1 agtaaaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaatagga 100  Q
    |||||||||||| | |||| ||||||||||  |||||||| ||||| ||| | ||||||| ||||||||||| |  ||| |||||||  || |||| |||    
T  4973961 agtaaaataaatcatgtgtcggtgatacacagttagatctgatagatctcatctatccaacggtctccttttcttgggggttaaaatgaataaaattgga 4974060  T
Q  101 ccaaattga 109  Q
    |||||||||    
T  4974061 ccaaattga 4974069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 109
Target Start/End: Complemental strand, 18787353 - 18787249
Alignment:
Q  5 aaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaa 104  Q
    |||||||||||||||||||||||||| || | |||| ||| |||||  | |||||| |||||  ||||||| ||||||||||||    |||| |||||||    
T  18787353 aaataaattaagtgttggtgatacaccataaaatctgataaacctccgtaatccaacggtctatttttttaggggattaaaattatcaaaattggaccaa 18787254  T
Q  105 attga 109  Q
    |||||    
T  18787253 attga 18787249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 88
Target Start/End: Complemental strand, 19217832 - 19217749
Alignment:
Q  5 aaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaatt 88  Q
    |||||||||| |||||||||||||||||| | |||  |||||||||  | |||||| |||||| ||||||| || |||||||||    
T  19217832 aaataaattaggtgttggtgatacactataaaatccgatagacctccgtaatccaacggtctctttttttagggtattaaaatt 19217749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 88
Target Start/End: Original strand, 29187943 - 29188026
Alignment:
Q  5 aaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaatt 88  Q
    |||||||||| ||||||||||| |||||| | |||| |||||||||    |||||| |||||| ||||||| ||||||||||||    
T  29187943 aaataaattaggtgttggtgatgcactataaaatctgatagacctctgcaatccaacggtctctttttttaggggattaaaatt 29188026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 88
Target Start/End: Original strand, 44748476 - 44748559
Alignment:
Q  5 aaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaatt 88  Q
    |||||||||| |||||||||||||||||| | |||| ||||||||   | ||||||  |||||||||| || ||||||||||||    
T  44748476 aaataaattaggtgttggtgatacactataaaatctgatagaccttcgtaatccaacagtctccttttctaggggattaaaatt 44748559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 80
Target Start/End: Complemental strand, 45398728 - 45398653
Alignment:
Q  5 aaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaaggga 80  Q
    ||||||||||  ||||||||||||||||| |||| | ||| |||||  |||||||||| |||||||||||| ||||    
T  45398728 aaataaattagatgttggtgatacactataagatttgataaacctcccttatccaatgatctccttttttagggga 45398653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 88
Target Start/End: Original strand, 45399923 - 45400006
Alignment:
Q  5 aaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaatt 88  Q
    |||||||||| ||||| |||||||||||| | |||| ||||||||   | |||||| |||||| ||||||| ||||||||||||    
T  45399923 aaataaattaggtgttagtgatacactataaaatctgatagaccttcgtaatccaacggtctctttttttaggggattaaaatt 45400006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 29657194 - 29657080
Alignment:
Q  1 agtaaaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctcctt-ttttaagggattaaaattgatgaaatagg 99  Q
    |||||||||| | | |||||||||||||||  |||||||| ||||  ||| ||||||||| |||||| || ||||  ||| |||||||| || |||||||    
T  29657194 agtaaaataattcaggtgttggtgatacacagttagatctgatagttctcatttatccaacggtctcgttgtttttgggggttaaaattaataaaatagg 29657095  T
Q  100 accaaattgactgat 114  Q
    | |||||||| ||||    
T  29657094 atcaaattgaatgat 29657080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 40918252 - 40918405
Alignment:
Q  1 agtaaaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaatagga 100  Q
    ||||||||||||||||||||  |||||  || | |||||| |||| |||| | ||||||| |||||||||    |  | || |||||| | ||||||| |    
T  40918252 agtaaaataaattaagtgttactgatatgctgtaagatctaatagtcctcctatatccaacggtctccttg---agagaatcaaaattaacgaaatagta 40918348  T
Q  101 ccaaattgactgatagaaacacatataaaggaccaagttgaaaaatttaatagttat 157  Q
    |||||||||  ||   ||||||| |||||||||||| ||||||| ||||||||||||    
T  40918349 ccaaattgatagaccaaaacacacataaaggaccaaattgaaaattttaatagttat 40918405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 109
Target Start/End: Complemental strand, 7011839 - 7011734
Alignment:
Q  5 aaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtc-tccttttttaagggattaaaattgatgaaataggacca 103  Q
    |||||||||| |||||||||||||||||| | |||| |||||||||  | |||||| |||| |  |||||||| |||||||||||    |||| ||||||    
T  7011839 aaataaattaggtgttggtgatacactataaaatcttatagacctccgtaatccaacggtcttttttttttaatggattaaaattatcaaaattggacca 7011740  T
Q  104 aattga 109  Q
    ||||||    
T  7011739 aattga 7011734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 109
Target Start/End: Complemental strand, 7027197 - 7027092
Alignment:
Q  5 aaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtc-tccttttttaagggattaaaattgatgaaataggacca 103  Q
    |||||||||| |||||||||||||||||| | |||| |||||||||  | |||||| |||| |  |||||||| |||||||||||    |||| ||||||    
T  7027197 aaataaattaggtgttggtgatacactataaaatcttatagacctccgtaatccaacggtcttttttttttaatggattaaaattatcaaaattggacca 7027098  T
Q  104 aattga 109  Q
    ||||||    
T  7027097 aattga 7027092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 156
Target Start/End: Original strand, 23153552 - 23153696
Alignment:
Q  11 attaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaaattgac 110  Q
    |||| ||||| |||||||||  |||||||| || |||||| |||||||||  |||| |||||| |  || |||||||| || ||||| ||  |||||||     
T  23153552 attaggtgttagtgatacaccgttagatctgatggacctcctttatccaacagtcttctttttgagaggtttaaaattaataaaatatgattaaattga- 23153650  T
Q  111 tgatagaaacacatataaaggaccaagttgaaaaatttaatagtta 156  Q
    ||||| ||||| | ||||| |||||| ||||||  |||||||||||    
T  23153651 tgataaaaacaaagataaatgaccaaattgaaacgtttaatagtta 23153696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 109
Target Start/End: Original strand, 40322154 - 40322255
Alignment:
Q  8 taaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaaatt 107  Q
    ||||||| ||||||||||||||   |||||||  || |||||| |||||||||| |||| |||||| | | | |||||||| || |||||||| ||||||    
T  40322154 taaattatgtgttggtgatacatcgttagatccgatggacctcctttatccaattgtcttctttttaaggagtttaaaattaataaaataggatcaaatt 40322253  T
Q  108 ga 109  Q
    ||    
T  40322254 ga 40322255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 44746933 - 44746848
Alignment:
Q  3 taaaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaatt 88  Q
    |||||||||||| |||||| | ||||||||| | || | |||||||||  | |||||| |||||| |||| |||||||||||||||    
T  44746933 taaaataaattaggtgttgataatacactataaaatatgatagacctccgtaatccaacggtctctttttctaagggattaaaatt 44746848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 109
Target Start/End: Original strand, 9392728 - 9392832
Alignment:
Q  5 aaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaa 104  Q
    |||||||||| |||  ||||||||||||| | |||| |||||||||  | |||||| |||||| |||| || ||||||||||||    |||| |||||||    
T  9392728 aaataaattaggtgccggtgatacactataaaatctgatagacctctgtaatccaacggtctctttttctaggggattaaaattatcaaaattggaccaa 9392827  T
Q  105 attga 109  Q
    |||||    
T  9392828 attga 9392832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 109
Target Start/End: Complemental strand, 44417662 - 44417558
Alignment:
Q  5 aaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaa 104  Q
    |||||||||| |||||||||||| ||||| | |||| |||||||||  | ||||||   |||| ||||||| ||||||||||||    |||| |||||||    
T  44417662 aaataaattaggtgttggtgatagactataaaatctgatagacctccgtaatccaacaatctctttttttaggggattaaaattatcaaaattggaccaa 44417563  T
Q  105 attga 109  Q
    |||||    
T  44417562 attga 44417558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 88
Target Start/End: Complemental strand, 9391724 - 9391641
Alignment:
Q  5 aaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaatt 88  Q
    |||||||||  |||||| ||||||||||| | |||| ||||||||   | |||||| |||||| |||||||| |||||||||||    
T  9391724 aaataaatttggtgttgatgatacactataaaatctgatagaccttcgtaatccaacggtctctttttttaaaggattaaaatt 9391641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 88
Target Start/End: Complemental strand, 13597348 - 13597265
Alignment:
Q  5 aaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaatt 88  Q
    |||||||||| |||||||||||||||||| | |||| |||||||||  | |||||| | | || |||||||  |||||||||||    
T  13597348 aaataaattaggtgttggtgatacactataaaatcttatagacctccctaatccaacgatatctttttttagaggattaaaatt 13597265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 26005554 - 26005473
Alignment:
Q  7 ataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaatt 88  Q
    |||||||| |||||||||||||||||| | |||| ||||||||   | |||||| |||||| |||||||  ||| |||||||    
T  26005554 ataaattacgtgttggtgatacactataaaatcttatagacctttgtaatccaacggtctctttttttagtggagtaaaatt 26005473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 156
Target Start/End: Original strand, 35045812 - 35045960
Alignment:
Q  7 ataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaaat 106  Q
    |||||||| ||||||||||||||   |||||||  || || ||| ||||||||| ||| | |||||| | | | |||||||| || |||||||| |||||    
T  35045812 ataaattatgtgttggtgatacatcgttagatccgatggatctcctttatccaacggtattctttttaaggagtttaaaattaataaaataggatcaaat 35045911  T
Q  107 tgactgatagaaacacatataaaggaccaagttgaaaaatttaatagtta 156  Q
    ||| ||||  ||||| | ||||| |||||  ||||||  |||||||||||    
T  35045912 tga-tgattaaaacaaagataaatgaccattttgaaacgtttaatagtta 35045960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 104
Target Start/End: Original strand, 46203568 - 46203669
Alignment:
Q  3 taaaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggacc 102  Q
    |||||| |||||  ||||||||||||||  |||||| | ||||| ||| |||||||||| ||||| ||||  ||   ||||||||| |||||||| ||||    
T  46203568 taaaattaattagatgttggtgatacaccgttagattttatagatctcttttatccaatagtctcattttcgaatatattaaaattaatgaaataagacc 46203667  T
Q  103 aa 104  Q
    ||    
T  46203668 aa 46203669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 109
Target Start/End: Complemental strand, 4973716 - 4973609
Alignment:
Q  2 gtaaaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctcctttt-ttaagggattaaaattgatgaaatagga 100  Q
    ||||||||||| |  ||||||||||||||  |||||| | ||||||||| | ||||||| |||||| |||| || |||| || ||||  || ||||||||    
T  4973716 gtaaaataaatcacatgttggtgatacacagttagatatgatagacctcatctatccaacggtctcattttcttgaggg-ttcaaatgaataaaatagga 4973618  T
Q  101 ccaaattga 109  Q
    |||||||||    
T  4973617 ccaaattga 4973609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 8540764 - 8540708
Alignment:
Q  4 aaaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaa 60  Q
    ||||| |||||||||||| |||||||| || ||||||| ||||| || |||||||||    
T  8540764 aaaattaattaagtgttgatgatacaccatcagatctcgtagacgtcatttatccaa 8540708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 109
Target Start/End: Original strand, 18788473 - 18788577
Alignment:
Q  5 aaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaa 104  Q
    |||||||||| |||||||||||||| ||| | |||| ||||||||   | |||||| |||||  |||||||  |||||||||||    |||| |||||||    
T  18788473 aaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaacggtctatttttttagaggattaaaattatcaaaattggaccaa 18788572  T
Q  105 attga 109  Q
    |||||    
T  18788573 attga 18788577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 33
Target Start/End: Complemental strand, 45689051 - 45689023
Alignment:
Q  5 aaataaattaagtgttggtgatacactat 33  Q
    |||||||||||||||||||||||||||||    
T  45689051 aaataaattaagtgttggtgatacactat 45689023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 78; Significance: 2e-36; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 6 - 212
Target Start/End: Original strand, 2764003 - 2764211
Alignment:
Q  6 aataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaaa 105  Q
    ||||||||||||||||||||||||   |||||||||| ||| ||| ||||||||| |||||||||||||| | |||||||||||| |||||||||| |||    
T  2764003 aataaattaagtgttggtgatacatggttagatctcacagatctcctttatccaacggtctccttttttaggagattaaaattgacgaaataggactaaa 2764102  T
Q  106 ttgactgatagaaacacatataaaggaccaagttgaaaaatttaatagttatgacac--atttttgaaaaagagaattaagttaagagaccgggtgttca 203  Q
    || || || |||||||||||||||||||||| |||| |  ||||| || ||||| ||  ||||   ||||| |||||||||||||| || |||  | |||    
T  2764103 ttaaccgacagaaacacatataaaggaccaacttgagacttttaaaagatatgagaccaatttaaaaaaaaaagaattaagttaagggatcggaggatca 2764202  T
Q  204 attaagcct 212  Q
    |||||||||    
T  2764203 attaagcct 2764211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 6 - 212
Target Start/End: Complemental strand, 44115636 - 44115430
Alignment:
Q  6 aataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaaa 105  Q
    ||||||||| || |||||||||||  ||||||||||| | ||||| ||||||||| |||||||||||||| | |||||||||| | |||||||||| |||    
T  44115636 aataaattaggtattggtgatacatgattagatctcacaaacctcctttatccaacggtctccttttttaggagattaaaattaacgaaataggactaaa 44115537  T
Q  106 ttgactgatagaaacacatataaaggaccaagttgaaaaatttaatagttatgacacatttttgaaaaagagaattaagttaagagaccgggtgttcaat 205  Q
    || || ||  ||||||||||||||||||||| |||| |  ||||| || ||||| ||   ||| ||||| |||||||||||||| ||||||  | |||||    
T  44115536 ttaaccgacggaaacacatataaaggaccaatttgagacttttaaaagatatgagaccaatttaaaaaaaagaattaagttaagggaccggaggatcaat 44115437  T
Q  206 taagcct 212  Q
    |||||||    
T  44115436 taagcct 44115430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 6 - 211
Target Start/End: Original strand, 44116599 - 44116804
Alignment:
Q  6 aataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaaa 105  Q
    ||||||||||||||||||||||||   ||| |||||  ||||||| ||||||||| |||||||||||||| | |||||||||||| |||||||||| |||    
T  44116599 aataaattaagtgttggtgatacatgtttaaatctcccagacctcctttatccaacggtctccttttttaggagattaaaattgacgaaataggactaaa 44116698  T
Q  106 ttgactgatagaaacacatataaaggaccaagttgaaaaatttaatagttatgacacatttttgaaaaagagaattaagttaagagaccgggtgttcaat 205  Q
    || || ||  ||||||||||||||||||||| |||| |  ||||| || ||||  ||   ||| || || |||||||||||||| ||||||  | |||||    
T  44116699 ttaaccgacggaaacacatataaaggaccaacttgagacttttaaaagatatgtgaccaatttaaataaaagaattaagttaagggaccggaggatcaat 44116798  T
Q  206 taagcc 211  Q
    ||||||    
T  44116799 taagcc 44116804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 8895360 - 8895206
Alignment:
Q  1 agtaaaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaatagga 100  Q
    |||||||||||||| |||||||||||||||  |||||||| ||||||||  ||||||| ||| |||||||||||| ||| |||||||| |||||||||||    
T  8895360 agtaaaataaattacgtgttggtgatacacggttagatctgatagacctaatttatccgatgatctccttttttagggggttaaaattaatgaaatagga 8895261  T
Q  101 ccaaattgactgatagaaacacatataaaggaccaagttgaaaaatttaatagtta 156  Q
    ||||||||| |||  |||||| ||| ||| |||||| ||||||  |||| ||||||    
T  8895260 ccaaattgaatgaaggaaaca-ataaaaatgaccaaattgaaacgtttagtagtta 8895206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 6 - 214
Target Start/End: Complemental strand, 2762988 - 2762780
Alignment:
Q  6 aataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaaa 105  Q
    ||||||||| || |||||||||||  ||||||||||| | ||||| ||||||||| |||||||||||||| | |||||||||| | |||||| ||| |||    
T  2762988 aataaattaggtattggtgatacatgattagatctcacatacctcttttatccaacggtctccttttttaggagattaaaattaacgaaatatgactaaa 2762889  T
Q  106 ttgactgatagaaacacatataaaggaccaagttgaaaaatttaatagttatgacacatttttgaaaaagagaattaagttaagagaccgggtgttcaat 205  Q
    || || ||   |||||||||||||||||||| |||| |  ||||| || ||||| ||   ||| ||||| |||||||||||||  || |||  | |||||    
T  2762888 ttaaccgacgaaaacacatataaaggaccaacttgagacttttaaaagatatgagaccaatttaaaaaaaagaattaagttaaaggatcggaggatcaat 2762789  T
Q  206 taagcctta 214  Q
    |||||||||    
T  2762788 taagcctta 2762780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 50003135 - 50003347
Alignment:
Q  1 agtaaaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaatagga 100  Q
    ||||| |||||||| |||||||||||||||  |||||||| || |||||| ||||||||| |||||  ||||| | | | |||||||| || ||||||||    
T  50003135 agtaatataaattatgtgttggtgatacaccgttagatctgattgacctcctttatccaacggtcttatttttaaggagtttaaaattaataaaatagga 50003234  T
Q  101 ccaaattgactgatagaaacacatataaaggaccaagttgaaaaatttaatagttatgacacatttttgaaaaagagaattaagttaagagaccgggtgt 200  Q
    ||||||||| ||||  ||||| | |||||||||||  ||||||  ||||||||||| |  ||   || |||| | |||||||||||||| ||||   ||     
T  50003235 ccaaattga-tgattaaaacaaacataaaggaccattttgaaacgtttaatagttaggggaccaattcgaaataaagaattaagttaagggaccaaatga 50003333  T
Q  201 tcaattaagcctta 214  Q
    ||||||||||||||    
T  50003334 tcaattaagcctta 50003347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 15 - 143
Target Start/End: Original strand, 27226465 - 27226592
Alignment:
Q  15 agtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaaattgactgat 114  Q
    |||||||||||  |||| |||||||| || |||||| ||||||||| | ||| |||||| | ||| |||||||| || ||||||||||||||||| ||||    
T  27226465 agtgttggtgacgcactgttagatcttatggacctcctttatccaacgatcttctttttgaggggtttaaaattaataaaataggaccaaattga-tgat 27226563  T
Q  115 agaaacacatataaaggaccaagttgaaa 143  Q
      ||||| | |||||||||||| ||||||    
T  27226564 gaaaacaaacataaaggaccaaattgaaa 27226592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 88
Target Start/End: Complemental strand, 5689924 - 5689841
Alignment:
Q  5 aaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaatt 88  Q
    ||||||||||||||||||||||||||||| | |||| |||||||||  | |||||| |||||| | |||||| |||||||||||    
T  5689924 aaataaattaagtgttggtgatacactataaaatctgatagacctccgtaatccaacggtctcttgttttaaaggattaaaatt 5689841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 16 - 119
Target Start/End: Complemental strand, 48336536 - 48336433
Alignment:
Q  16 gtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaaattgactgata 115  Q
    |||||||||||||||  |||||||| ||| ||||| ||||||||| ||||||||||| |  ||| |||||||  || ||||||||||||||||| ||||     
T  48336536 gtgttggtgatacacagttagatctaataaacctcatttatccaacggtctccttttcttgggggttaaaatgaataaaataggaccaaattgaatgatg 48336437  T
Q  116 gaaa 119  Q
    ||||    
T  48336436 gaaa 48336433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 46690206 - 46690312
Alignment:
Q  1 agtaaaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaaggga-ttaaaattgatgaaatagg 99  Q
    |||||||||||||| |||||||||||||||  |||||| |  || ||||| ||||||||||||||| ||||||| || || |||||||| || ||||||     
T  46690206 agtaaaataaattaggtgttggtgatacacggttagatatggtaaacctcctttatccaatggtcttcttttttgagagatttaaaattaataaaataga 46690305  T
Q  100 accaaat 106  Q
    |||||||    
T  46690306 accaaat 46690312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 109
Target Start/End: Original strand, 28777600 - 28777704
Alignment:
Q  5 aaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaa 104  Q
    |||||||||| |||||| ||||||||||| | |||| |||||||||  | |||||| |||||| ||||||| ||||||||||||    |||| |||||||    
T  28777600 aaataaattaggtgttgatgatacactataaaatctgatagacctccgtaatccaacggtctctttttttaggggattaaaattatcaaaattggaccaa 28777699  T
Q  105 attga 109  Q
    |||||    
T  28777700 attga 28777704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 109
Target Start/End: Complemental strand, 37609526 - 37609422
Alignment:
Q  5 aaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaa 104  Q
    |||||||||| |||||| ||| ||||||||| |||| |||||||||  | |||||| |||||| ||||||| ||||||||||||  | |||| ||| |||    
T  37609526 aaataaattaggtgttgatgagacactattaaatcttatagacctccctaatccaacggtctctttttttaggggattaaaattattaaaattggatcaa 37609427  T
Q  105 attga 109  Q
    |||||    
T  37609426 attga 37609422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 109
Target Start/End: Original strand, 37610676 - 37610780
Alignment:
Q  5 aaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaa 104  Q
    |||||||||| |||||||||||||||||| | |||| |||||||||  | |||||| |||||  ||||||| ||||||||||||    |||| |||||||    
T  37610676 aaataaattaggtgttggtgatacactataaaatctgatagacctccgtaatccaacggtctttttttttaggggattaaaattatcaaaattggaccaa 37610775  T
Q  105 attga 109  Q
    |||||    
T  37610776 attga 37610780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 109
Target Start/End: Original strand, 47431100 - 47431204
Alignment:
Q  5 aaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaa 104  Q
    |||||||||| |||| ||||||||||||| | |||| |||||||||  | |||||| |||||| ||||||| ||||||||||||    |||| |||||||    
T  47431100 aaataaattaggtgtgggtgatacactataaaatctaatagacctccataatccaacggtctctttttttaggggattaaaattatcaaaattggaccaa 47431199  T
Q  105 attga 109  Q
    |||||    
T  47431200 attga 47431204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 9 - 88
Target Start/End: Complemental strand, 31937236 - 31937157
Alignment:
Q  9 aaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaatt 88  Q
    |||||| |||||||||||||||||| | |||| |||||||||  | |||||| |||||| ||||||| ||||||||||||    
T  31937236 aaattaggtgttggtgatacactataaaatctgatagacctccgtaatccaacggtctctttttttaggggattaaaatt 31937157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 6 - 109
Target Start/End: Original strand, 53180718 - 53180821
Alignment:
Q  6 aataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaaa 105  Q
    ||||||||| ||||||||||||||||||   |||| |||||||||  | |||||| ||||||||||||||  |||||||||||  | |||| |||| |||    
T  53180718 aataaattaggtgttggtgatacactatacaatctgatagacctccgtaatccaacggtctccttttttagaggattaaaattattaaaattggactaaa 53180817  T
Q  106 ttga 109  Q
    ||||    
T  53180818 ttga 53180821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 46903537 - 46903619
Alignment:
Q  5 aaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaat 87  Q
    |||||||||| |||||||||||||||||| | |||| |||||||||  | |||||| |||||  ||||||| |||||||||||    
T  46903537 aaataaattaggtgttggtgatacactataaaatctaatagacctccgtaatccaacggtctttttttttaggggattaaaat 46903619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 136
Target Start/End: Original strand, 48338034 - 48338163
Alignment:
Q  6 aataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaaa 105  Q
    ||||||| | |||||||||||||||  |||||||| ||||||||| | ||||||  ||||||||||| |  | | |||||||  || |||||||||||||    
T  48338034 aataaatcaggtgttggtgatacacagttagatctgatagacctcatatatccagcggtctccttttcttggtggttaaaatgaataaaataggaccaaa 48338133  T
Q  106 ttgactgatagaaacacatataaaggaccaa 136  Q
    |||| |||| |||| | | ||||||||||||    
T  48338134 ttgaatgatggaaaga-agataaaggaccaa 48338163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 31938224 - 31938324
Alignment:
Q  9 aaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaaattg 108  Q
    |||||| |||||||||||||||||| | |||| ||||||||   | |||||| |||||| ||||||| ||||||||||||  | |||| |||| ||||||    
T  31938224 aaattaggtgttggtgatacactataaaatcttatagaccttcgtaatccaacggtctctttttttaggggattaaaattattaaaattggactaaattg 31938323  T
Q  109 a 109  Q
    |    
T  31938324 a 31938324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 88
Target Start/End: Complemental strand, 17741035 - 17740952
Alignment:
Q  5 aaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaatt 88  Q
    |||||||||| |||||||||||||||||| | |||| |||||||||  | |||| | ||||||  ||||||| |||||||||||    
T  17741035 aaataaattaggtgttggtgatacactataaaatctgatagacctccgtaatccgacggtctctatttttaaaggattaaaatt 17740952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 88
Target Start/End: Complemental strand, 19042355 - 19042272
Alignment:
Q  5 aaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaatt 88  Q
    |||||||||| |||||||||||||||||| | |||| |||||||||  | |||| | ||||||  ||||||| |||||||||||    
T  19042355 aaataaattaggtgttggtgatacactataaaatctgatagacctccgtaatccgacggtctctatttttaaaggattaaaatt 19042272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 88
Target Start/End: Original strand, 43393966 - 43394049
Alignment:
Q  5 aaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaatt 88  Q
    |||||||||| |||||||||||||||| | | |||| |||||||||  | |||||| |||||| ||||||| ||| ||||||||    
T  43393966 aaataaattaggtgttggtgatacactgtaaaatctgatagacctccgtaatccaacggtctctttttttagggggttaaaatt 43394049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 156
Target Start/End: Complemental strand, 50002611 - 50002463
Alignment:
Q  7 ataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaaat 106  Q
    |||||||| |||||||||||||||  |||||||| || || ||| ||||||||| | ||| |||||  | | | |||||||| || ||||||||| ||||    
T  50002611 ataaattatgtgttggtgatacaccgttagatctgatggatctcctttatccaacgatcttcttttgaaggagtttaaaattaataaaataggactaaat 50002512  T
Q  107 tgactgatagaaacacatataaaggaccaagttgaaaaatttaatagtta 156  Q
    ||| ||||  ||||| | |||||||||||  | ||||  |||||||||||    
T  50002511 tga-tgattaaaacaaacataaaggaccatttcgaaacgtttaatagtta 50002463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 152
Target Start/End: Complemental strand, 2089034 - 2088896
Alignment:
Q  12 ttaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaaattgact 111  Q
    |||||||||||||||||||  | |||| | ||  || || |||||  |||||||| |||||||| ||  |||||||| || ||||||||||||||||| |    
T  2089034 ttaagtgttggtgatacacggtaagatatgatgaacttcctttatttaatggtctacttttttagggatttaaaattaataaaataggaccaaattga-t 2088936  T
Q  112 gatagaaacacatataaaggaccaagttgaaaaatttaata 152  Q
    |||  ||||| | || ||||||||| |||||| ||||||||    
T  2088935 gatgaaaacaaagat-aaggaccaaattgaaacatttaata 2088896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 109
Target Start/End: Complemental strand, 28776653 - 28776549
Alignment:
Q  5 aaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaa 104  Q
    |||||||||| |||||| ||||||| ||| | |||| |||||||||  | |||||| ||||||  |||||| ||||||||||||    |||| |||||||    
T  28776653 aaataaattaggtgttgatgatacattataaaatctgatagacctccgtaatccaacggtctctgtttttaggggattaaaattatcaaaattggaccaa 28776554  T
Q  105 attga 109  Q
    |||||    
T  28776553 attga 28776549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 143
Target Start/End: Complemental strand, 50719805 - 50719719
Alignment:
Q  55 atccaatggtctccttttttaagggattaaaattgatgaaataggaccaaattgactgatagaaacacatataaaggaccaagttgaaa 143  Q
    |||||||||||||||||||||   | ||||||||||| |||||| |||||||||| |||| |||||| | | |||||||||| ||||||    
T  50719805 atccaatggtctccttttttagccg-ttaaaattgataaaatagaaccaaattgaatgatggaaaca-agacaaaggaccaaattgaaa 50719719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 143
Target Start/End: Original strand, 50793043 - 50793129
Alignment:
Q  55 atccaatggtctccttttttaagggattaaaattgatgaaataggaccaaattgactgatagaaacacatataaaggaccaagttgaaa 143  Q
    |||||||||||||||||||||   | ||||||||||| |||||| |||||||||| |||| |||||| | | |||||||||| ||||||    
T  50793043 atccaatggtctccttttttagccg-ttaaaattgataaaatagaaccaaattgaatgatggaaaca-agacaaaggaccaaattgaaa 50793129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 53101727 - 53101675
Alignment:
Q  5 aaataaattaagtgttggtgatacactattagatctcatagacctcgtttatc 57  Q
    ||||||||||||||||||||||||||||| ||||||  ||||| || ||||||    
T  53101727 aaataaattaagtgttggtgatacactataagatctggtagacatcctttatc 53101675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 54354308 - 54354408
Alignment:
Q  9 aaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaaattg 108  Q
    |||||| |||||||||||||||| | | |||| |||||||||  | ||||||||||||| |||| || || |||||||||    |||| |||||||||||    
T  54354308 aaattaggtgttggtgatacactgtaaaatctgatagacctctataatccaatggtctctttttatagggaattaaaattatcaaaattggaccaaattg 54354407  T
Q  109 a 109  Q
    |    
T  54354408 a 54354408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 88
Target Start/End: Complemental strand, 2232807 - 2232724
Alignment:
Q  5 aaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaatt 88  Q
    |||||||||| |||||| ||||||||  | | ||||||||||||||  | ||||||||||||  |||| || ||||||||||||    
T  2232807 aaataaattaggtgttgctgatacaccgtaaaatctcatagacctccgtaatccaatggtctttttttctaggggattaaaatt 2232724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 14206693 - 14206752
Alignment:
Q  1 agtaaaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaa 60  Q
    ||||||||||||||  | ||||||||||||  |||||||| ||||||||| |||||||||    
T  14206693 agtaaaataaattagatattggtgatacacagttagatctgatagacctcatttatccaa 14206752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 14214441 - 14214500
Alignment:
Q  1 agtaaaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaa 60  Q
    ||||||||||||||  | ||||||||||||  |||||||| ||||||||| |||||||||    
T  14214441 agtaaaataaattagatattggtgatacacagttagatctgatagacctcatttatccaa 14214500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 105
Target Start/End: Original strand, 21248175 - 21248273
Alignment:
Q  7 ataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaaa 105  Q
    |||||||| |||||||||||||||  |||||||  || |||||| || ||||||  |||| |||||| |  || |||||||| || |||||||||||||    
T  21248175 ataaattatgtgttggtgatacaccgttagatccgatggacctccttaatccaacagtcttctttttaagaggtttaaaattaataaaataggaccaaa 21248273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 27749291 - 27749237
Alignment:
Q  6 aataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaa 60  Q
    ||||||| |||||||||||||||||||| |||||| ||||| ||  |||||||||    
T  27749291 aataaatcaagtgttggtgatacactataagatctgatagatcttctttatccaa 27749237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 88
Target Start/End: Original strand, 5691014 - 5691091
Alignment:
Q  11 attaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaatt 88  Q
    |||| |||||||||||||||| | | |||| |||||||||  | |||||| |||||| ||||||| |||||| |||||    
T  5691014 attaggtgttggtgatacactgtaaaatctgatagacctccgtaatccaacggtctctttttttaggggatttaaatt 5691091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 52522131 - 52522086
Alignment:
Q  5 aaataaattaagtgttggtgatacactattagatctcatagacctc 50  Q
    |||||||||| |||||||||||||||||| | |||| |||||||||    
T  52522131 aaataaattaggtgttggtgatacactataaaatctgatagacctc 52522086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 212
Target Start/End: Original strand, 9769591 - 9769627
Alignment:
Q  176 agaattaagttaagagaccgggtgttcaattaagcct 212  Q
    |||||||||||||| ||||||||| ||||||||||||    
T  9769591 agaattaagttaagggaccgggtggtcaattaagcct 9769627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 106
Target Start/End: Complemental strand, 46688608 - 46688505
Alignment:
Q  2 gtaaaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggac 101  Q
    ||||||||||||| |||||||||||||||  |||||| | ||  ||||  ||||||||  ||||| ||||||| |||  |||||||| || ||||| |||    
T  46688608 gtaaaataaattaggtgttggtgatacacagttagatatgatgaacctgctttatccagcggtcttctttttt-aggatttaaaattaataaaatatgac 46688510  T
Q  102 caaat 106  Q
    |||||    
T  46688509 caaat 46688505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 55209986 - 55209918
Alignment:
Q  5 aaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttt 73  Q
    |||||||||| |||||||| ||||||||| |  ||| |||||||||  | ||||||||||||| |||||    
T  55209986 aaataaattaggtgttggtaatacactataaattctgatagacctccgtaatccaatggtctctttttt 55209918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 72; Significance: 7e-33; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 9 - 212
Target Start/End: Complemental strand, 21338 - 21135
Alignment:
Q  9 aaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaaattg 108  Q
    |||||| |||||| ||||||||  ||||||||| |||||||| ||||||| | ||||| ||||||||  |||||||||||||| |||| |||||||||||    
T  21338 aaattatgtgttgatgatacaccgttagatctcgtagacctcctttatccgacggtcttcttttttataggattaaaattgattaaattggaccaaattg 21239  T
Q  109 actgatagaaacacatataaaggaccaagttgaaaaatttaatagttatgacacatttttgaaaaagagaattaagttaagagaccgggtgttcaattaa 208  Q
        ||  |||||||||||||||||||| ||||| | ||||||| || ||  ||   |||||| || |||||||||||||| ||||||| ||||||||||    
T  21238 ttcaatgaaaacacatataaaggaccaaattgaacattttaatacttttgggaccaatttgaataaaagaattaagttaagggaccgggcgttcaattaa 21139  T
Q  209 gcct 212  Q
    ||||    
T  21138 gcct 21135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 9 - 220
Target Start/End: Original strand, 22386 - 22596
Alignment:
Q  9 aaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaaattg 108  Q
    |||||| |||||| ||||||||  ||||||||  |||||||  ||||||| | ||||| ||||||||  |||||||||||||| |||| ||||| |||||    
T  22386 aaattatgtgttgatgatacaccgttagatcttgtagaccttctttatccgacggtcttcttttttataggattaaaattgattaaattggacc-aattg 22484  T
Q  109 actgatagaaacacatataaaggaccaagttgaaaaatttaatagttatgacacatttttgaaaaagagaattaagttaagagaccgggtgttcaattaa 208  Q
        ||  |||||||||||||||||||| ||||| | ||||||| || ||  ||   ||| || || |||||||||||||| ||||||||||||||||||    
T  22485 ttcaatgaaaacacatataaaggaccaaattgaacattttaatacttttgggaccaatttaaataaaagaattaagttaagggaccgggtgttcaattaa 22584  T
Q  209 gccttattttta 220  Q
    ||| | ||||||    
T  22585 gccctcttttta 22596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 3 - 211
Target Start/End: Original strand, 42921 - 43126
Alignment:
Q  3 taaaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggacc 102  Q
    |||||||||||| |||||||||||||||| ||| ||||||| |||||   |||||||| ||||||| ||||    ||||||||||||| ||||||||||     
T  42921 taaaataaattaggtgttggtgatacactgttaaatctcatggacct---ttatccaacggtctccattttcggaggattaaaattgacgaaataggact 43017  T
Q  103 aaattgactgatagaaacacatataaaggaccaagttgaaaaatttaatagttatgacacatttttgaaaaagagaattaagttaagagaccgggtgttc 202  Q
    |||||||| ||  |||||| |||||||||||||| ||||| | ||||| ||||||   ||   |||||| || |||||||||||||| |||| | |||||    
T  43018 aaattgaccgacggaaacatatataaaggaccaacttgaacattttaagagttataggaccaatttgaagaaaagaattaagttaagggaccagatgttc 43117  T
Q  203 aattaagcc 211  Q
    |||||||||    
T  43118 aattaagcc 43126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 70; Significance: 1e-31; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 20066282 - 20066069
Alignment:
Q  1 agtaaaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaatagga 100  Q
    |||| ||||||||| |||||||||||||||| ||| |||| || || ||| ||||||||| |||||| ||||||||||  |||||||| | |||||||||    
T  20066282 agtagaataaattaggtgttggtgatacactgttaaatctgatggatctcttttatccaacggtctctttttttaaggagttaaaattaaggaaatagga 20066183  T
Q  101 ccaaattgactgatagaaacacatataaaggaccaagttgaaaaatttaatagttatgacacatttttgaaaaagagaattaagttaagagaccgggtgt 200  Q
    |||||||||| ||   | ||||||||||| |||||| ||||||  ||||| ||||||   ||   ||| ||||| |||||||| ||||  ||||||| ||    
T  20066182 ccaaattgacagacttagacacatataaaagaccaaattgaaacgtttaaaagttataggaccaatttaaaaaaaagaattaaattaaaggaccgggagt 20066083  T
Q  201 tcaattaagcctta 214  Q
    ||||||||||||||    
T  20066082 tcaattaagcctta 20066069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 11080944 - 11081098
Alignment:
Q  1 agtaaaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaatagga 100  Q
    |||||||||||| | |||||||||||||||  |||||||| ||||||||| ||||||||| |||||||||||||  | | |||||||  |||||||||||    
T  11080944 agtaaaataaatcaggtgttggtgatacacagttagatctgatagacctcatttatccaaaggtctccttttttttgaggttaaaatgaatgaaatagga 11081043  T
Q  101 ccaaattgactgatagaaacacatataaaggaccaagttgaaaaatttaatagtta 156  Q
    ||||||||| |||| |||| | | |||||||||||| ||| ||  |||||||||||    
T  11081044 ccaaattgaatgatggaaaga-agataaaggaccaatttggaacgtttaatagtta 11081098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 35462901 - 35463055
Alignment:
Q  1 agtaaaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaatagga 100  Q
    |||||||||||||| |||||||||||||||| |||||||  ||||||||| ||||||||| | |||||||||| || |  |||||||| |  ||||||||    
T  35462901 agtaaaataaattaggtgttggtgatacactgttagatcagatagacctcatttatccaacgatctcctttttaaatgagttaaaattaacaaaatagga 35463000  T
Q  101 ccaaattgactgatagaaacacatataaaggaccaagttgaaaaatttaatagtta 156  Q
    ||||||| ||| | | ||||||| |||||||||||| |||| | |||| |||||||    
T  35463001 ccaaatttactaaca-aaacacagataaaggaccaatttgagacattttatagtta 35463055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 23 - 141
Target Start/End: Complemental strand, 35462849 - 35462732
Alignment:
Q  23 tgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaaattgactgatagaaacac 122  Q
    ||||||||  |||||||| ||||||||||||||||||| |||||||||||| || |  |||||||| |  ||||||||||||||| ||| | | ||||||    
T  35462849 tgatacacggttagatctgatagacctcgtttatccaacggtctcctttttaaatgagttaaaattaacaaaataggaccaaatttactaaca-aaacac 35462751  T
Q  123 atataaaggaccaagttga 141  Q
    | |||||||||||| ||||    
T  35462750 agataaaggaccaatttga 35462732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 88
Target Start/End: Complemental strand, 9244270 - 9244187
Alignment:
Q  5 aaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaatt 88  Q
    |||||||||| |||||||||||||||||| | |||| |||||||||  | |||| | |||||| ||||||||||||||||||||    
T  9244270 aaataaattaggtgttggtgatacactataaaatctgatagacctccgtaatcctacggtctcattttttaagggattaaaatt 9244187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 109
Target Start/End: Complemental strand, 30641002 - 30640898
Alignment:
Q  5 aaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaa 104  Q
    |||||||||| |||||||||||||||||| | || | |||||||||  | |||||| |||||| ||||||| ||||||||||||  | |||| ||| |||    
T  30641002 aaataaattaggtgttggtgatacactataaaatttgatagacctccgtaatccaacggtctctttttttaggggattaaaattattaaaattggatcaa 30640903  T
Q  105 attga 109  Q
    |||||    
T  30640902 attga 30640898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 5 - 88
Target Start/End: Original strand, 9245344 - 9245427
Alignment:
Q  5 aaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaatt 88  Q
    |||||||||| |||||||||||||||||| | |||| |||||||||    |||||| |||||| ||||||| ||||||||||||    
T  9245344 aaataaattaggtgttggtgatacactataaaatctgatagacctcagcaatccaacggtctctttttttaggggattaaaatt 9245427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 109
Target Start/End: Complemental strand, 4534226 - 4534129
Alignment:
Q  12 ttaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaaattga 109  Q
    |||||||||||||||||||  | |||| | ||  || || ||||||||||||||| |||||||| ||  |||||||| || |||||||||||||||||    
T  4534226 ttaagtgttggtgatacacggtaagatatgatgaacttcctttatccaatggtctacttttttagggatttaaaattaataaaataggaccaaattga 4534129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 12820011 - 12820116
Alignment:
Q  1 agtaaaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaatagga 100  Q
    |||||||||||||| |||||||||||||||  |||||| | ||  ||||| ||||||||| ||||| |||||| |  |  |||||||| || ||||||||    
T  12820011 agtaaaataaattaggtgttggtgatacacagttagatatgatgaacctcctttatccaacggtcttctttttgagagatttaaaattaataaaatagga 12820110  T
Q  101 ccaaat 106  Q
    ||||||    
T  12820111 ccaaat 12820116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 109
Target Start/End: Original strand, 26366107 - 26366211
Alignment:
Q  5 aaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaa 104  Q
    |||||||||| |||||||||||||||||| | |||| |||||||||  | ||| || |||||  ||||||| ||||||||||||  | |||  |||||||    
T  26366107 aaataaattatgtgttggtgatacactataaaatctaatagacctccgtaatctaacggtctttttttttaggggattaaaattattaaaaatggaccaa 26366206  T
Q  105 attga 109  Q
    |||||    
T  26366207 attga 26366211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 88
Target Start/End: Complemental strand, 26364946 - 26364863
Alignment:
Q  5 aaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaatt 88  Q
    |||||||||| |||||||||||||| ||| | |||| |||||||||  | |||||| |||||| |||||||  |||||||||||    
T  26364946 aaataaattaggtgttggtgatacattataaaatctgatagacctctgtaatccaacggtctctttttttagaggattaaaatt 26364863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 88
Target Start/End: Complemental strand, 41637036 - 41636953
Alignment:
Q  5 aaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaatt 88  Q
    |||||||||| ||||||||||||||| || | |||| |||||| ||  | |||||| |||||| ||||||| ||||||||||||    
T  41637036 aaataaattaggtgttggtgatacacgataaaatctgatagacttccgtaatccaacggtctctttttttaggggattaaaatt 41636953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 20067147 - 20067304
Alignment:
Q  1 agtaaaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaatagga 100  Q
    |||| ||||||||| |||||| |||||||   ||| |||| || ||| || |||||  || |||||||||||||| ||  |||||||| |||||||||||    
T  20067147 agtagaataaattaggtgttgatgatacatcgttaaatctgatggacttcctttatttaacggtctccttttttagggagttaaaattaatgaaatagga 20067246  T
Q  101 ccaaattgactgatagaaacacat-ataaaggaccaagttgaaaaatttaatagttat 157  Q
      |||||||| ||   |||||||| |||||||| ||| ||||||  ||||| ||||||    
T  20067247 ataaattgaccgacttaaacacataataaaggatcaaattgaaacttttaaaagttat 20067304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 156
Target Start/End: Complemental strand, 9189546 - 9189444
Alignment:
Q  52 tttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaaattgactgatagaaacacatataaaggaccaagttgaaaaatttaat 151  Q
    ||||||||| ||||| |||||||| ||  |||||||| || ||||| ||||||||||| ||| ||||||| | || ||||||||| ||||||  ||||||    
T  9189546 tttatccaacggtcttcttttttagggatttaaaattaataaaatatgaccaaattga-tgacagaaacaaagat-aaggaccaaattgaaacgtttaat 9189449  T
Q  152 agtta 156  Q
    |||||    
T  9189448 agtta 9189444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 109
Target Start/End: Complemental strand, 20309128 - 20309024
Alignment:
Q  5 aaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaa 104  Q
    |||||||||| || ||||||||||||||| | |||| |||||||||  | |||||| |||||| |||| || ||||| ||||||    |||| |||||||    
T  20309128 aaataaattaggtattggtgatacactataaaatctgatagacctcagtgatccaacggtctctttttctaggggatcaaaattatcaaaattggaccaa 20309029  T
Q  105 attga 109  Q
    |||||    
T  20309028 attga 20309024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 109
Target Start/End: Complemental strand, 21095761 - 21095657
Alignment:
Q  5 aaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaa 104  Q
    |||||||||| || ||||||||||||||| | |||| |||||||||  | |||||| |||||| |||| || ||||| ||||||    |||| |||||||    
T  21095761 aaataaattaggtattggtgatacactataaaatctgatagacctcagtgatccaacggtctctttttctaggggatcaaaattatcaaaattggaccaa 21095662  T
Q  105 attga 109  Q
    |||||    
T  21095661 attga 21095657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 41638070 - 41638169
Alignment:
Q  9 aaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaaattg 108  Q
    |||||| |||||||||||||||||| | |  | |||||||||  | ||||||| ||||| ||||||| ||||||||||||  | |||| |||||||||||    
T  41638070 aaattaggtgttggtgatacactataaaacatgatagacctctgtaatccaattgtctc-ttttttaggggattaaaattattaaaattggaccaaattg 41638168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 60
Target Start/End: Original strand, 3714452 - 3714507
Alignment:
Q  5 aaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaa 60  Q
    |||||||| |||||||||||||||||||| |||||| ||||| |||  ||||||||    
T  3714452 aaataaatcaagtgttggtgatacactataagatctgatagatctcccttatccaa 3714507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 105
Target Start/End: Original strand, 41767082 - 41767180
Alignment:
Q  7 ataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaaa 105  Q
    |||||||| |||||||||||||||  |||||||  || |||||| || ||||||  |||| |||||| |  || |||||||| || |||||||||||||    
T  41767082 ataaattatgtgttggtgatacaccgttagatccgatggacctccttaatccaacagtcttctttttaagaggtttaaaattaataaaataggaccaaa 41767180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 156
Target Start/End: Complemental strand, 42307698 - 42307546
Alignment:
Q  2 gtaaaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggac 101  Q
    ||||||||||| |  |||| ||||||||| ||||||| | ||||||||  ||||||||||| |||| ||||||   ||||||||||  || ||||||| |    
T  42307698 gtaaaataaatcagatgttagtgatacacaattagatatgatagaccttatttatccaatgatctcatttttt-gtggattaaaatgaataaaataggtc 42307600  T
Q  102 caaattgactgatagaaacacatataaaggaccaagttgaaaaatttaatagtta 156  Q
     ||||| | |||| |||| | | ||||| ||| || |||||| ||||||||||||    
T  42307599 taaattaaatgatggaaaga-agataaatgactaatttgaaatatttaatagtta 42307546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 52 - 109
Target Start/End: Complemental strand, 22913344 - 22913287
Alignment:
Q  52 tttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaaattga 109  Q
    ||||||||||| ||| |||||||| ||  |||||||| || |||||||||||||||||    
T  22913344 tttatccaatgatctacttttttagggatttaaaattaataaaataggaccaaattga 22913287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 22012342 - 22012274
Alignment:
Q  5 aaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttt 73  Q
    |||||||| | |||||||||||||||||| | ||||  ||||||||  |||||||| | ||||||||||    
T  22012342 aaataaatcaggtgttggtgatacactataaaatctggtagacctcacttatccaacgatctccttttt 22012274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 22013172 - 22013240
Alignment:
Q  5 aaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttt 73  Q
    |||||||| | |||||||||||||||||| | ||||  ||||||||  |||||||| | ||||||||||    
T  22013172 aaataaatcaggtgttggtgatacactataaaatctggtagacctcacttatccaacgatctccttttt 22013240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 68; Significance: 2e-30; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 6 - 212
Target Start/End: Original strand, 25212948 - 25213155
Alignment:
Q  6 aataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaaa 105  Q
    ||||||||| || |||||||||||  ||||||||||| | ||||| ||||||||| ||||| |||||||| | |||||||||||| |||||||||  |||    
T  25212948 aataaattaggtattggtgatacatgattagatctcacaaacctcctttatccaacggtcttcttttttaggagattaaaattgacgaaataggattaaa 25213047  T
Q  106 ttgactgatagaaacacatataaaggaccaagttgaaaaatttaatagttatgaca-catttttgaaaaagagaattaagttaagagaccgggtgttcaa 204  Q
    || || ||  ||||||||||||||||||||| |||| |  ||||| || ||||  | || |||| ||||| |||||||||||||| ||||||  | ||||    
T  25213048 ttaaccgacggaaacacatataaaggaccaacttgagacttttaaaagatatgggaccaattttaaaaaaaagaattaagttaagggaccggaggatcaa 25213147  T
Q  205 ttaagcct 212  Q
    ||||||||    
T  25213148 ttaagcct 25213155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 6 - 212
Target Start/End: Original strand, 25277100 - 25277307
Alignment:
Q  6 aataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaaa 105  Q
    ||||||||| || |||||||||||  ||||||||||| | ||||| ||||||||| ||||| |||||||| | |||||||||||| |||||||||  |||    
T  25277100 aataaattaggtattggtgatacatgattagatctcacaaacctcctttatccaacggtcttcttttttaggagattaaaattgacgaaataggattaaa 25277199  T
Q  106 ttgactgatagaaacacatataaaggaccaagttgaaaaatttaatagttatgaca-catttttgaaaaagagaattaagttaagagaccgggtgttcaa 204  Q
    || || ||  ||||||||||||||||||||| |||| |  ||||| || ||||  | || |||| ||||| |||||||||||||| ||||||  | ||||    
T  25277200 ttaaccgacggaaacacatataaaggaccaacttgagacttttaaaagatatgggaccaattttaaaaaaaagaattaagttaagggaccggaggatcaa 25277299  T
Q  205 ttaagcct 212  Q
    ||||||||    
T  25277300 ttaagcct 25277307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 7 - 194
Target Start/End: Original strand, 38603668 - 38603854
Alignment:
Q  7 ataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaaat 106  Q
    |||||| | ||||||||||||||||||||||||| || |||||  ||||||||| ||||| |||||||| | | |||||||| || ||||||||||||||    
T  38603668 ataaatgaggtgttggtgatacactattagatctgatggaccttctttatccaacggtcttcttttttaggagtttaaaattaataaaataggaccaaat 38603767  T
Q  107 tgactgatagaaacacatataaaggaccaagttgaaaaatttaatagttatgacacatttttgaaaaagagaattaagttaagagacc 194  Q
    ||| |||   ||||| | |||||||||||  ||||||| ||||||||||| || ||   || |||||| |||||||||||||||||||    
T  38603768 tga-tgactaaaacaaagataaaggaccattttgaaaagtttaatagttaagagaccaattcgaaaaaaagaattaagttaagagacc 38603854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 9 - 214
Target Start/End: Original strand, 1011977 - 1012182
Alignment:
Q  9 aaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaaattg 108  Q
    |||||| |||||| ||||||||  ||||||||| |||||||| |||||| || ||||| ||||||||  |||||||||||||| |||| |||||||||||    
T  1011977 aaattatgtgttgatgatacaccgttagatctcgtagacctcctttatcaaacggtcttcttttttataggattaaaattgattaaattggaccaaattg 1012076  T
Q  109 actgatagaaacacatataaaggaccaagttgaaaaatttaatagttatgacacatttttgaaaaagagaattaagttaagagaccgggtgttcaattaa 208  Q
        ||  |||| ||||||||||||||| ||||| | ||| ||| || ||  ||   ||| || || |||||||||||||  ||||||||||||||||||    
T  1012077 ttcaatgaaaacccatataaaggaccaaattgaacattttgatacttttgggaccaatttaaataaaagaattaagttaaaggaccgggtgttcaattaa 1012176  T
Q  209 gcctta 214  Q
    ||||||    
T  1012177 gcctta 1012182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 5 - 141
Target Start/End: Complemental strand, 30673520 - 30673384
Alignment:
Q  5 aaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaa 104  Q
    |||||||||| ||||||||||||||   ||| |||||| | ||||| ||||||||| ||||||| ||||||   |||||||||||| |||||||||  ||    
T  30673520 aaataaattaggtgttggtgatacatggttaaatctcacaaacctcctttatccaacggtctccctttttagaagattaaaattgacgaaataggattaa 30673421  T
Q  105 attgactgatagaaacacatataaaggaccaagttga 141  Q
    |||||| ||  ||||||||||||||||||||| ||||    
T  30673420 attgaccgacggaaacacatataaaggaccaatttga 30673384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 33362479 - 33362633
Alignment:
Q  1 agtaaaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagg-gattaaaattgatgaaatagg 99  Q
    |||||||||||| | || ||||||||||||  |||||||| ||||||||| |||||||||||||||||||||||   | | |||||||  ||||||||||    
T  33362479 agtaaaataaataaggtattggtgatacacagttagatctgatagacctcatttatccaatggtctcctttttttttgaggttaaaatgaatgaaatagg 33362578  T
Q  100 accaaattgactgatagaaacacatataaaggaccaagttgaaaaatttaatagtta 156  Q
    |||||||||| |||| |||| | | |||||||||||| ||| ||| |||||||||||    
T  33362579 accaaattgaatgatggaaaga-agataaaggaccaatttg-aaagtttaatagtta 33362633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 10 - 189
Target Start/End: Complemental strand, 42962218 - 42962040
Alignment:
Q  10 aattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaaattga 109  Q
    ||||| ||||||||||||||| ||||||||| ||||||||| ||||||||| ||||| |||||| |  || |||||||| || |||||||||||||||||    
T  42962218 aattaggtgttggtgatacaccattagatcttatagacctcctttatccaacggtcttctttttgagaggtttaaaattaataaaataggaccaaattga 42962119  T
Q  110 ctgatagaaacacatataaaggaccaagttgaaaaatttaatagttatgacacatttttgaaaaagagaattaagttaag 189  Q
     ||||  ||||| | |||||||||||| || ||   ||||||||||| |  ||   || |||||| ||||||||||||||    
T  42962118 -tgatgaaaacaaagataaaggaccaatttaaagcgtttaatagttaggggaccaattcgaaaaaaagaattaagttaag 42962040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 5 - 159
Target Start/End: Original strand, 30674746 - 30674900
Alignment:
Q  5 aaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaa 104  Q
    |||||||||| ||||||||||||||   |||||||| | ||||||| ||||| ||| |||||||||||||| | ||||||||||||  ||||||||| ||    
T  30674746 aaataaattaggtgttggtgatacatggttagatcttacagacctcctttattcaacggtctccttttttaggagattaaaattgacaaaataggactaa 30674845  T
Q  105 attgactgatagaaacacatataaaggaccaagttgaaaaatttaatagttatga 159  Q
    |||||  || | ||| |||||||||||| ||| |||| |  ||||| ||||||||    
T  30674846 attgatcgacaaaaatacatataaaggatcaacttgagacttttaagagttatga 30674900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 32 - 213
Target Start/End: Complemental strand, 1011008 - 1010827
Alignment:
Q  32 attagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaaattgactgatagaaacacatataaagg 131  Q
    |||||||||| |||||||  |||||||||  |||| ||||||||  |||||||||||||| |||| |||||||||||    ||  |||| ||||||||||    
T  1011008 attagatctcgtagaccttatttatccaacagtcttcttttttataggattaaaattgattaaattggaccaaattgttcaatgaaaacccatataaagg 1010909  T
Q  132 accaagttgaaaaatttaatagttatgacacatttttgaaaaagagaattaagttaagagaccgggtgttcaattaagcctt 213  Q
    ||||| ||||| | ||||||| || ||  ||   |||||| || |||||||| ||||| |||||| ||||||||||||||||    
T  1010908 accaaattgaacattttaatacttttgggaccaatttgaataaaagaattaaattaagggaccggatgttcaattaagcctt 1010827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 14357794 - 14357912
Alignment:
Q  1 agtaaaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaatagga 100  Q
    |||||||||| | | |||||||||||||||  |||||| | ||||| ||| ||||||||| |||||||||||||  ||| |||||||| || ||||||||    
T  14357794 agtaaaataattcaggtgttggtgatacacagttagatatgatagatctcatttatccaacggtctcctttttttgggggttaaaattaataaaatagga 14357893  T
Q  101 ccaaattgactgatagaaa 119  Q
    ||||||||| |||| ||||    
T  14357894 ccaaattgaatgatggaaa 14357912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 30916030 - 30916148
Alignment:
Q  1 agtaaaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaatagga 100  Q
    |||||||||||| | |||||||| ||||||  |||||||| ||||||||  |||||||||||||||||||||||  | | |||||||  |||||||| ||    
T  30916030 agtaaaataaatcaggtgttggtaatacacagttagatctgatagacctaatttatccaatggtctcctttttttggaggttaaaatgaatgaaatatga 30916129  T
Q  101 ccaaattgactgatagaaa 119  Q
    ||||||||| |||| ||||    
T  30916130 ccaaattgaatgatggaaa 30916148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 30915701 - 30915628
Alignment:
Q  1 agtaaaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctcctttttt 74  Q
    |||||||||||| | |||||||||||||||  |||||||| ||||||||| | |||||||||||||||||||||    
T  30915701 agtaaaataaatcaggtgttggtgatacacagttagatctgatagacctcatatatccaatggtctcctttttt 30915628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 14356635 - 14356482
Alignment:
Q  1 agtaaaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaatagga 100  Q
    |||||||||||| | ||||||||||||||| ||||||| | ||||||||| || ||||||||||||| ||||||  | | |||||||  || ||||||||    
T  14356635 agtaaaataaatcaggtgttggtgatacacaattagatgtgatagacctcattcatccaatggtctctttttttttgag-ttaaaatgaataaaatagga 14356537  T
Q  101 ccaaattgactgatagaaacacatataaaggaccaagttgaaaaatttaatagtta 156  Q
     |||||||| |||| |||| | | ||||| |||||| ||  || ||||||||||||    
T  14356536 tcaaattgaatgatggaaaga-agataaacgaccaatttagaacatttaatagtta 14356482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 7 - 194
Target Start/End: Original strand, 39051591 - 39051776
Alignment:
Q  7 ataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagg-gattaaaattgatgaaataggaccaaa 105  Q
    |||||||| |||||| |||||||||||||||||| || |||||  |||||| |  |||||  |||||| ||| | |||||||| || |||||||| ||||    
T  39051591 ataaattaggtgttgatgatacactattagatctgatggaccttctttatctagcggtct--ttttttgaggagtttaaaattaataaaataggatcaaa 39051688  T
Q  106 ttgactgatagaaacacatataaaggaccaagttgaaaaatttaatagttatgacacatttttgaaaaagagaattaagttaagagacc 194  Q
    |||| |||   ||||| | |||||||||||  |||||| |||||||||||| || ||   || |||||| |||||||||||||| ||||    
T  39051689 ttga-tgactaaaacaaagataaaggaccattttgaaacatttaatagttaagagaccaattcgaaaaaaagaattaagttaagggacc 39051776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 109
Target Start/End: Complemental strand, 19229043 - 19228939
Alignment:
Q  5 aaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaa 104  Q
    |||||||||| |||||| ||||||||||| | |||| |||||||||  | |||||| |||||| ||||||| ||||||||||||    |||| |||||||    
T  19229043 aaataaattaggtgttgatgatacactataaaatctaatagacctccgtaatccaacggtctctttttttaggggattaaaattatcaaaattggaccaa 19228944  T
Q  105 attga 109  Q
    |||||    
T  19228943 attga 19228939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 5 - 88
Target Start/End: Original strand, 13278144 - 13278227
Alignment:
Q  5 aaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaatt 88  Q
    |||||||||| |||||||||||||||||| | |||| |||||||||  | |||||| |||||| |||| || ||||||||||||    
T  13278144 aaataaattaggtgttggtgatacactataaaatctgatagacctccctaatccaacggtctctttttctatgggattaaaatt 13278227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 109
Target Start/End: Original strand, 9083220 - 9083313
Alignment:
Q  16 gtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaaattga 109  Q
    |||||||||||||||||| | |||| ||||||||   | |||||| |||||||||||||| ||||||||||||    |||| ||||||||||||    
T  9083220 gtgttggtgatacactataaaatcttatagaccttcgtaatccaacggtctccttttttaggggattaaaattatcaaaattggaccaaattga 9083313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 156
Target Start/End: Original strand, 11907085 - 11907227
Alignment:
Q  12 ttaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaaattgact 111  Q
    |||||||||||||||||||  | |||| | ||  || || ||||||||||||||| |||||||| ||  |||||||| || ||||| ||||||||||| |    
T  11907085 ttaagtgttggtgatacacggtaagatatgatgaacttcctttatccaatggtctacttttttagggatttaaaattaataaaatatgaccaaattga-t 11907183  T
Q  112 gatagaaacacatataaaggaccaagttgaaaaatttaatagtta 156  Q
    ||   ||||| | || ||||||||| |||||| ||||||||||||    
T  11907184 gacgaaaacaaagat-aaggaccaaattgaaacatttaatagtta 11907227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 109
Target Start/End: Original strand, 19229986 - 19230090
Alignment:
Q  5 aaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaa 104  Q
    ||||||||||||||||| ||||||||||| | || | |||||||||  | |||||| |||||| ||||| | ||||||||||||    |||| |||||||    
T  19229986 aaataaattaagtgttgatgatacactataaaatttgatagacctccgtaatccaacggtctcttttttgaggggattaaaattatcaaaattggaccaa 19230085  T
Q  105 attga 109  Q
    |||||    
T  19230086 attga 19230090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 109
Target Start/End: Original strand, 39135572 - 39135669
Alignment:
Q  12 ttaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaaattga 109  Q
    |||||||||||||||||||  | |||| | ||  || || ||||||||||||||| |||||||  ||  |||||||| || |||||||||||||||||    
T  39135572 ttaagtgttggtgatacacggtaagatatgatgaacttcctttatccaatggtctacttttttggggatttaaaattaataaaataggaccaaattga 39135669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 87
Target Start/End: Complemental strand, 18654500 - 18654420
Alignment:
Q  7 ataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaat 87  Q
    |||||||| |||||||||||||||| | | |||| |||||||||  | |||||| |||||| ||||| | |||||||||||    
T  18654500 ataaattaggtgttggtgatacactgtaaaatctgatagacctccgtaatccaacggtctcttttttaatgggattaaaat 18654420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 88
Target Start/End: Original strand, 39350562 - 39350641
Alignment:
Q  9 aaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaatt 88  Q
    |||||| |||||||||||||||| | | |||| |||||||||  | |||||| |||||| |||||||  |||||||||||    
T  39350562 aaattaggtgttggtgatacactgtaaaatctgatagacctccgtaatccaacggtctctttttttagaggattaaaatt 39350641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 189
Target Start/End: Complemental strand, 5163858 - 5163677
Alignment:
Q  7 ataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaaat 106  Q
    |||||||| |||||||||||||||  ||||||   || || ||| ||||||||| |||||  ||||| | | | |||||||| || ||||| ||||||||    
T  5163858 ataaattatgtgttggtgatacaccgttagattcgatggatctcctttatccaacggtcttatttttaaggagtttaaaattaataaaatatgaccaaat 5163759  T
Q  107 tgactgatagaaacacatataaaggaccaagttgaaaaatttaatagttatgacacatttttgaaaaagagaattaagttaag 189  Q
    ||| | ||  ||||| | |||||||| ||  |||||| |||||||||||| |  ||   || |||||| ||||||||||||||    
T  5163758 tga-taattaaaacaaagataaaggatcattttgaaacatttaatagttaggggaccaattcgaaaaaaagaattaagttaag 5163677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 12372519 - 12372475
Alignment:
Q  5 aaataaattaagtgttggtgatacactattagatctcatagacct 49  Q
    |||||||||| |||||||||||||||||| | |||| ||||||||    
T  12372519 aaataaattaggtgttggtgatacactataaaatctgatagacct 12372475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 107
Target Start/End: Complemental strand, 38602861 - 38602761
Alignment:
Q  7 ataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaaat 106  Q
    ||||||||||||||||||||||| | |||||||| ||  |  || |||||||||  |||| |||||| | | | |||||||| || ||||| ||||||||    
T  38602861 ataaattaagtgttggtgatacattgttagatctgatgaatatcttttatccaactgtcttctttttgaggagtttaaaattaataaaatatgaccaaat 38602762  T
Q  107 t 107  Q
    |    
T  38602761 t 38602761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 210
Target Start/End: Complemental strand, 39291578 - 39291534
Alignment:
Q  166 tttgaaaaagagaattaagttaagagaccgggtgttcaattaagc 210  Q
    |||||| || |||||||||||||| ||||||| ||||||||||||    
T  39291578 tttgaagaaaagaattaagttaagggaccgggagttcaattaagc 39291534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 58; Significance: 1e-24; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 4 - 109
Target Start/End: Complemental strand, 12364391 - 12364286
Alignment:
Q  4 aaaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggacca 103  Q
    ||||||||||| |||||||||||||||  |||||||| ||||||||| |||||||||||||| ||||||||  ||| |||||||  || |||||||||||    
T  12364391 aaaataaattatgtgttggtgatacacagttagatctgatagacctcatttatccaatggtcccctttttttgggggttaaaataaattaaataggacca 12364292  T
Q  104 aattga 109  Q
    ||||||    
T  12364291 aattga 12364286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 40542439 - 40542227
Alignment:
Q  1 agtaaaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaatagga 100  Q
    |||| ||||||||| || ||| ||||||||  ||| |||  || |||||| |||||| || |||||||||||||| ||  |||||||| |||||||||||    
T  40542439 agtagaataaattaggtattgatgatacaccgttaaatccgatggacctcctttatctaacggtctccttttttagggagttaaaattaatgaaatagga 40542340  T
Q  101 ccaaattgactgatagaaacacatataaaggaccaagttgaaaaatttaatagttatgacacatttttgaaaaagagaattaagttaagagaccgggtgt 200  Q
    |||||||||| ||   |||||||||||||||||||| ||  ||  ||||| | |||| | ||   ||| ||||| |||||||||||||  |||  || ||    
T  40542339 ccaaattgaccgacttaaacacatataaaggaccaaattacaacttttaaaaattataaaaccaattttaaaaaaagaattaagttaaaggacatggagt 40542240  T
Q  201 tcaattaagcctt 213  Q
    |||||||||||||    
T  40542239 tcaattaagcctt 40542227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 7 - 109
Target Start/End: Complemental strand, 38593228 - 38593127
Alignment:
Q  7 ataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaaat 106  Q
    |||||||||||||||||||||||||||||||||| || || ||| ||||||||| ||||| |||||| | | | |||||||| || ||||||||||||||    
T  38593228 ataaattaagtgttggtgatacactattagatctgatggatctc-tttatccaacggtcttctttttgaggagtttaaaattaataaaataggaccaaat 38593130  T
Q  107 tga 109  Q
    |||    
T  38593129 tga 38593127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 7 - 109
Target Start/End: Complemental strand, 38596824 - 38596723
Alignment:
Q  7 ataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaaat 106  Q
    |||||||||||||||||||||||||||||||||| || || ||| ||||||||| ||||| |||||| | | | |||||||| || ||||||||||||||    
T  38596824 ataaattaagtgttggtgatacactattagatctgatggatctc-tttatccaacggtcttctttttgaggagtttaaaattaataaaataggaccaaat 38596726  T
Q  107 tga 109  Q
    |||    
T  38596725 tga 38596723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 9 - 107
Target Start/End: Complemental strand, 10330901 - 10330804
Alignment:
Q  9 aaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaaatt 107  Q
    |||||| ||||| |||||||||| |||||||| ||||||||| |||||||||| |||| |||||| | ||| |||||||| || |||||||||||||||    
T  10330901 aaattacgtgtttgtgatacactgttagatctgatagacctc-tttatccaatagtcttctttttaaggggtttaaaattaataaaataggaccaaatt 10330804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 136
Target Start/End: Complemental strand, 370962 - 370837
Alignment:
Q  10 aattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaaattga 109  Q
    ||||| ||||||||||||||| ||||||| | ||||||||| ||||||||| |||||  |||||||  || |||||||  || |||||||| ||||||||    
T  370962 aattaggtgttggtgatacaccattagatttgatagacctcatttatccaacggtcttattttttagaggtttaaaatcaataaaataggatcaaattga 370863  T
Q  110 ctgatagaaacacatataaaggaccaa 136  Q
     ||||| ||||| | ||||| ||||||    
T  370862 -tgataaaaacaaagataaatgaccaa 370837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 135
Target Start/End: Original strand, 12365933 - 12366061
Alignment:
Q  4 aaaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggacca 103  Q
    ||||||||| | |||||||||||||||  ||| |||| ||||| ||| ||||||||| ||||||| ||||   ||| |||||||  || |||||||||||    
T  12365933 aaaataaatcaggtgttggtgatacacagttatatctgatagatctcatttatccaacggtctccatttt--gggggttaaaatgaataaaataggacca 12366030  T
Q  104 aattgactgatagaaacacatataaaggacca 135  Q
    |||||| |||| |||| | |||||||||||||    
T  12366031 aattgaatgatggaaaga-atataaaggacca 12366061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 152
Target Start/End: Complemental strand, 20921706 - 20921564
Alignment:
Q  10 aattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctcctt--ttttaagggattaaaattgatgaaataggaccaaatt 107  Q
    ||||| |||||||||||| ||  |||||| | ||||||||| |||||||||  ||||||||  |||| |||| |||||||  || |||||||||||||||    
T  20921706 aattaggtgttggtgatatacagttagatatgatagacctcatttatccaacagtctcctttttttttaggg-ttaaaatgaataaaataggaccaaatt 20921608  T
Q  108 gactgatagaaacacatataaaggaccaagttgaaaaatttaata 152  Q
    || |||| |||| | | || ||||||||| ||||||  |||||||    
T  20921607 gaatgatggaaaga-agatcaaggaccaatttgaaacgtttaata 20921564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 88
Target Start/End: Complemental strand, 16602930 - 16602847
Alignment:
Q  5 aaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaatt 88  Q
    |||||||||| |||||||||||||||| | | |||| |||||| ||  | |||||| |||||  |||||| |||||||||||||    
T  16602930 aaataaattaggtgttggtgatacactgtaaaatctgatagacatccgtaatccaacggtcttttttttttagggattaaaatt 16602847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 156
Target Start/End: Original strand, 371889 - 372033
Alignment:
Q  11 attaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaaattgac 110  Q
    |||| ||||| |||||||||  |||||||| ||  ||||| |||||||||  |||  |||||| |  || |||||||| || |||||||| ||||||||     
T  371889 attaggtgttagtgatacaccgttagatctgatgaacctcctttatccaacagtcatctttttgagaggtttaaaattaataaaataggatcaaattga- 371987  T
Q  111 tgatagaaacacatataaaggaccaagttgaaaaatttaatagtta 156  Q
    ||||  ||||| | |||||||| ||| ||||||  |||||||||||    
T  371988 tgatgaaaacaaagataaaggatcaaattgaaacgtttaatagtta 372033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 109
Target Start/End: Complemental strand, 30178737 - 30178640
Alignment:
Q  12 ttaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaaattga 109  Q
    ||||||||||||||| |||| | |||| | ||  || || ||||||||||||||| |||||||| |   |||||||| || |||||||| ||||||||    
T  30178737 ttaagtgttggtgatgcactgtaagatatgatgaacttcctttatccaatggtctacttttttaggtatttaaaattaataaaataggatcaaattga 30178640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 88
Target Start/End: Complemental strand, 23833161 - 23833089
Alignment:
Q  16 gtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaatt 88  Q
    |||||| ||||||||||| | ||||  ||||||||  | |||||| ||||| |||||||| ||||||||||||    
T  23833161 gtgttgatgatacactataaaatcttctagacctccgtaatccaacggtcttcttttttaggggattaaaatt 23833089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 27892249 - 27892293
Alignment:
Q  5 aaataaattaagtgttggtgatacactattagatctcatagacct 49  Q
    |||||||||| |||||||||||||||||| | |||| ||||||||    
T  27892249 aaataaattaggtgttggtgatacactataaaatctgatagacct 27892293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 56; Significance: 2e-23; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 682469 - 682315
Alignment:
Q  1 agtaaaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaatagga 100  Q
    |||||||||||| |||||||||||||||||   ||||||| ||||||||| ||||||||| |||||||||||||   ||||||||||  || ||||| ||    
T  682469 agtaaaataaatcaagtgttggtgatacacagctagatctgatagacctcatttatccaacggtctcctttttttgtggattaaaatgaataaaataaga 682370  T
Q  101 ccaaattgactgatagaaacacatataaaggaccaagttgaaaaatttaatagtta 156  Q
    ||||||||| |||| |||| | | ||||| |||||| ||| ||  |||||||||||    
T  682369 ccaaattgaatgatggaaaga-agataaatgaccaatttggaacgtttaatagtta 682315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 18498139 - 18497983
Alignment:
Q  1 agtaaaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaatagga 100  Q
    |||||||||||||| |||||| ||||| ||  | |||||| |||| |||| |||||||||| | ||||||||| || | || |||||| | ||||||| |    
T  18498139 agtaaaataaattatgtgttgttgatataccgtaagatctgatagtcctcctttatccaataggctcctttttgaaagaatcaaaattaacgaaatagta 18498040  T
Q  101 ccaaattgactgatagaaacacatataaaggaccaagttgaaaaatttaatagttat 157  Q
    |||||||||  ||  |||||||| |||||||||||  ||||||| ||||||||||||    
T  18498039 ccaaattgatagaccgaaacacagataaaggaccagattgaaaattttaatagttat 18497983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 7 - 109
Target Start/End: Complemental strand, 13561476 - 13561374
Alignment:
Q  7 ataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaaat 106  Q
    |||||||| ||||||||||||||||||||||||| || |||||  ||||||||| | ||| |||||| | | | |||||||| || ||||||||||||||    
T  13561476 ataaattaggtgttggtgatacactattagatctgatggaccttctttatccaacgatcttctttttgaggagtttaaaattaataaaataggaccaaat 13561377  T
Q  107 tga 109  Q
    |||    
T  13561376 tga 13561374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 7 - 107
Target Start/End: Original strand, 13562214 - 13562314
Alignment:
Q  7 ataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaaat 106  Q
    |||||||| |||||||||||||||| |||||||| || || ||| |||||||||  |||| |||||||| | | |||||||| || ||||||||||||||    
T  13562214 ataaattaggtgttggtgatacactgttagatctgatggatctcctttatccaacagtcttcttttttaggagtttaaaattaataaaataggaccaaat 13562313  T
Q  107 t 107  Q
    |    
T  13562314 t 13562314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 213
Target Start/End: Complemental strand, 27719940 - 27719733
Alignment:
Q  5 aaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaa 104  Q
    |||||||||| |||||||||||||||||| | |||| |||||||||  | |||||| ||||| |||||||| |||||||||||     |||| ||| |||    
T  27719940 aaataaattaggtgttggtgatacactataaaatctgatagacctccgtaatccaacggtct-cttttttaggggattaaaatcatcaaaattggatcaa 27719842  T
Q  105 attgactgatagaaacacatataaaggaccaagttgaaaaatttaatagttatgacacatttttgaaaaagagaattaagttaagagaccgggtgttcaa 204  Q
    ||| |  ||   ||||| | |||||||||||||||||  | ||||| || ||||  ||    ||||| || |||||||||||||  ||||||| ||||||    
T  27719841 attaatagacgaaaacaaagataaaggaccaagttgatgattttaacagctatggaactaacttgaagaaaagaattaagttaaaggaccgggagttcaa 27719742  T
Q  205 ttaagcctt 213  Q
    |||||||||    
T  27719741 ttaagcctt 27719733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 109
Target Start/End: Original strand, 32348950 - 32349054
Alignment:
Q  5 aaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaa 104  Q
    |||||||||| |||||| ||||||||||| | |||| |||||||||  | |||||| |||||| ||||||| ||||||||||||    |||| |||||||    
T  32348950 aaataaattaggtgttgatgatacactataaaatctgatagacctccgtaatccaacggtctctttttttaggggattaaaattatcaaaattggaccaa 32349049  T
Q  105 attga 109  Q
    |||||    
T  32349050 attga 32349054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 157
Target Start/End: Original strand, 18499817 - 18499971
Alignment:
Q  3 taaaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggacc 102  Q
    ||||||||||||||||||| ||||| ||| | |||||| |||||| || ||||||  | |||||||||||| |  | || |||||| | ||||||| |||    
T  18499817 taaaataaattaagtgttgttgatatactgtaagatctgatagacatcatttatctgacggtctcctttttgagagaatcaaaattaacgaaatagtacc 18499916  T
Q  103 aaattgactgatagaaacacatataaaggaccaagttgaaaaatttaatagttat 157  Q
    |||||||  ||  |||  ||| |||||||||||  |||||||  |||||||||||    
T  18499917 aaattgatagactgaagtacagataaaggaccagattgaaaatgttaatagttat 18499971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 23638632 - 23638475
Alignment:
Q  1 agtaaaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaatagga 100  Q
    ||||||||||||||||| || ||||||||   ||| || | ||||| ||  ||||||||  |||||||||||| | ||| |||| ||| |  ||||||||    
T  23638632 agtaaaataaattaagtatttgtgatacatcgttaaatttgatagatctattttatccac-ggtctcctttttaagggggttaagattaacaaaatagga 23638534  T
Q  101 ccaaattgactgatagaaacacatataaaggaccaagttgaaaaatttaatagttatga 159  Q
      | |||||| || | ||||| ||||||| |||||| ||||||||||||||||||||||    
T  23638533 gtatattgaccgacaaaaacaaatataaaagaccaaattgaaaaatttaatagttatga 23638475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 156
Target Start/End: Complemental strand, 10673807 - 10673659
Alignment:
Q  7 ataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaaat 106  Q
    |||||||| ||| |||||||||||  |||||| | || |||||| ||||| ||| ||||| |||||| || || |||||||| || ||||||||| ||||    
T  10673807 ataaattaggtggtggtgatacacctttagatatgatggacctcctttattcaacggtcttctttttgaaaggtttaaaattaataaaataggactaaat 10673708  T
Q  107 tgactgatagaaacacatataaaggaccaagttgaaaaatttaatagtta 156  Q
    ||| |||   ||||| | |||||||||||| ||||||  |||| ||||||    
T  10673707 tga-tgacgaaaacaaacataaaggaccaaattgaaacgtttattagtta 10673659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 85
Target Start/End: Complemental strand, 21094610 - 21094530
Alignment:
Q  5 aaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaa 85  Q
    |||||||||| |||||||||||||||||| | ||||  ||||||||  | |||||| |||||| ||||||| |||||||||    
T  21094610 aaataaattaggtgttggtgatacactataaaatctagtagacctccgtaatccaacggtctctttttttaggggattaaa 21094530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 156
Target Start/End: Complemental strand, 27107373 - 27107231
Alignment:
Q  12 ttaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaaattgact 111  Q
    |||||||||||||||||||  | |||| | ||  || || ||||||||||||||| | |||||| ||  |||||||| || ||||||||||||||||| |    
T  27107373 ttaagtgttggtgatacacggtaagatatgatgaacttcttttatccaatggtctacatttttatggatttaaaattaataaaataggaccaaattga-t 27107275  T
Q  112 gatagaaacacatataaaggaccaagttgaaaaatttaatagtta 156  Q
    ||   ||||| | || ||||||||| |||||| ||||||||||||    
T  27107274 gacgaaaacaaagat-aaggaccaaattgaaatatttaatagtta 27107231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 156
Target Start/End: Complemental strand, 27149179 - 27149037
Alignment:
Q  12 ttaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaaattgact 111  Q
    |||||||||||||||||||  | |||| | ||  || || ||||||||||||||| | |||||| ||  |||||||| || ||||||||||||||||| |    
T  27149179 ttaagtgttggtgatacacggtaagatatgatgaacttcttttatccaatggtctacatttttatggatttaaaattaataaaataggaccaaattga-t 27149081  T
Q  112 gatagaaacacatataaaggaccaagttgaaaaatttaatagtta 156  Q
    ||   ||||| | || ||||||||| |||||| ||||||||||||    
T  27149080 gacgaaaacaaagat-aaggaccaaattgaaatatttaatagtta 27149037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 109
Target Start/End: Original strand, 32713796 - 32713900
Alignment:
Q  5 aaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaa 104  Q
    |||||||||| |||||||||||||||| | | |||| |||||||||  | |||||| |||| | ||||||| ||||||||||||    |||| |||||||    
T  32713796 aaataaattaggtgttggtgatacactgtaaaatcttatagacctccgtaatccaacggtcactttttttaggggattaaaattatcaaaattggaccaa 32713895  T
Q  105 attga 109  Q
    |||||    
T  32713896 attga 32713900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 683454 - 683560
Alignment:
Q  1 agtaaaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaatagga 100  Q
    |||||||||||| | ||||||| |||| ||  |||||||| ||||||||| ||||| ||| |||||| ||||||   ||||||||||  || |||| |||    
T  683454 agtaaaataaatcaggtgttggagatatacagttagatctgatagacctcatttattcaacggtctcttttttt--tggattaaaatgaataaaatggga 683551  T
Q  101 ccaaattga 109  Q
    |||||||||    
T  683552 ccaaattga 683560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 109
Target Start/End: Complemental strand, 32348013 - 32347909
Alignment:
Q  5 aaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaa 104  Q
    |||||||||| |||||| ||||||||||| | |||| ||||||| |  | |||||| | |||| ||||||| ||||||||||||    |||| |||||||    
T  32348013 aaataaattaggtgttgatgatacactataaaatctgatagacccccgtaatccaacgttctctttttttaggggattaaaattatcaaaattggaccaa 32347914  T
Q  105 attga 109  Q
    |||||    
T  32347913 attga 32347909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 109
Target Start/End: Complemental strand, 32712560 - 32712456
Alignment:
Q  5 aaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaa 104  Q
    |||||| ||| ||||||||| |||||||| | || | |||||||||  | |||||| |||||| ||||||| ||||||||||||    |||| |||||||    
T  32712560 aaataagttaggtgttggtggtacactataaaatttgatagacctccgtaatccaacggtctctttttttaggggattaaaattatcaaaattggaccaa 32712461  T
Q  105 attga 109  Q
    |||||    
T  32712460 attga 32712456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 109
Target Start/End: Complemental strand, 34995556 - 34995452
Alignment:
Q  5 aaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaa 104  Q
    ||||||||||  ||||||||||||||||| | |||| ||||||||   | ||| || |||||  ||||||| ||||||||||||  | |||| |||||||    
T  34995556 aaataaattagatgttggtgatacactataaaatctgatagaccttcgtaatctaacggtctgtttttttaggggattaaaattattaaaattggaccaa 34995457  T
Q  105 attga 109  Q
    |||||    
T  34995456 attga 34995452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 109
Target Start/End: Original strand, 34996674 - 34996778
Alignment:
Q  5 aaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaa 104  Q
    |||||||||| |||||||||||||||||| | |||| ||||||||   | |||||| |||||  ||||||| | ||||||||||    |||| |||||||    
T  34996674 aaataaattaggtgttggtgatacactataaaatctgatagaccttcgtaatccaacggtctgtttttttaggagattaaaattatcaaaattggaccaa 34996773  T
Q  105 attga 109  Q
    |||||    
T  34996774 attga 34996778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 18230538 - 18230453
Alignment:
Q  3 taaaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaag-ggattaaaatt 88  Q
    |||||| ||||| |||||||||||||||| ||| |||  ||  ||||| |||||||||||||||| ||||| ||| |||||||||||    
T  18230538 taaaattaattaggtgttggtgatacactgttaaatcatatgaacctcctttatccaatggtctc-tttttcaagcggattaaaatt 18230453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 109
Target Start/End: Complemental strand, 1692224 - 1692169
Alignment:
Q  53 ttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaaattga 109  Q
    |||||||||||||| |||||||| ||  |||||||| || |||||||||||||||||    
T  1692224 ttatccaatggtctacttttttagggatttaaaattaat-aaataggaccaaattga 1692169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 109
Target Start/End: Original strand, 11801255 - 11801359
Alignment:
Q  5 aaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaa 104  Q
    |||||||||| |||||  ||||||||||| | || | |||||||||  | |||||| |||||| ||||| | ||||||||||||    |||| |||||||    
T  11801255 aaataaattaggtgttaatgatacactataaaatttgatagacctccgtaatccaacggtctcttttttgaggggattaaaattatcaaaattggaccaa 11801354  T
Q  105 attga 109  Q
    |||||    
T  11801355 attga 11801359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 55; Significance: 9e-23; HSPs: 3)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 17 - 143
Target Start/End: Complemental strand, 755 - 630
Alignment:
Q  17 tgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaaattgactgatag 116  Q
    ||||||||||| ||  |||||||| ||| || |  ||||||||| |||||||||||||||   |||||||||||| ||||||||||||||||| |||| |    
T  755 tgttggtgatatacagttagatctgatatactttatttatccaacggtctccttttttaacccattaaaattgattaaataggaccaaattgaatgatgg 656  T
Q  117 aaacacatataaaggaccaagttgaaa 143  Q
    ||||| |||||||||||||| ||||||    
T  655 aaaca-atataaaggaccaaattgaaa 630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 1036 - 1223
Alignment:
Q  1 agtaaaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaatagga 100  Q
    |||||||||||||  |||||||||||||||  |||||||| ||| || || ||||| ||| ||||||||||||||     ||||||||||||||||||||    
T  1036 agtaaaataaatttggtgttggtgatacacggttagatctgatatacttcatttattcaacggtctccttttttagcacgttaaaattgatgaaatagga 1135  T
Q  101 ccaaattgactgatagaaacacatataaaggaccaagttgaaaaatttaatagttatgacacatttttgaaaaagagaattaagttaag 189  Q
    ||||||||| |||| ||||   | ||||||| |||| |||||| ||||||  |||| |  ||   ||||||||| ||||||||||||||    
T  1136 ccaaattgaatgat-gaaaataagataaagggccaaattgaaacatttaacggttaagggaccaatttgaaaaaaagaattaagttaag 1223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 54843 - 54690
Alignment:
Q  1 agtaaaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaatagga 100  Q
    ||||||||||||||||||||  |||||  || | |||||| |||| |||| | ||||||| |||||||||    |  | || |||||| | ||||||| |    
T  54843 agtaaaataaattaagtgttactgatatgctgtaagatctaatagtcctcctatatccaacggtctccttg---agagaatcaaaattaacgaaatagta 54747  T
Q  101 ccaaattgactgatagaaacacatataaaggaccaagttgaaaaatttaatagttat 157  Q
    |||||||||  ||   ||||||| |||||||||||| ||||||| ||||||||||||    
T  54746 ccaaattgatagaccaaaacacacataaaggaccaaattgaaaattttaatagttat 54690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 35566 - 35494
Alignment:
Q  1 agtaaaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttt 73  Q
    |||||||||||||| |||||||||||||||  |||||||| ||| ||||| ||||||||||||||||||||||    
T  35566 agtaaaataaattaggtgttggtgatacacagttagatctgataaacctcatttatccaatggtctccttttt 35494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1337 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold1337
Description:

Target: scaffold1337; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 7 - 121
Target Start/End: Complemental strand, 431 - 316
Alignment:
Q  7 ataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctcctttttt-aagggattaaaattgatgaaataggaccaaa 105  Q
    |||||||| |||||||||||||||  |||||| | | ||| ||| ||||||||| |||| | |||||| ||| |||||||||| ||||||||||||||||    
T  431 ataaattaggtgttggtgatacacggttagatatgacagatctcatttatccaacggtcacatttttttaagagattaaaattaatgaaataggaccaaa 332  T
Q  106 ttgactgatagaaaca 121  Q
    |||| |||| ||||||    
T  331 ttgaatgatggaaaca 316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 213
Target Start/End: Complemental strand, 9362 - 9155
Alignment:
Q  5 aaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaa 104  Q
    |||||||||| |||||||||||||||||| | |||| |||||||||  | |||||| ||||| |||||||| |||||||||||     |||| ||| |||    
T  9362 aaataaattaggtgttggtgatacactataaaatctgatagacctccgtaatccaacggtct-cttttttaggggattaaaatcatcaaaattggatcaa 9264  T
Q  105 attgactgatagaaacacatataaaggaccaagttgaaaaatttaatagttatgacacatttttgaaaaagagaattaagttaagagaccgggtgttcaa 204  Q
    ||| |  ||   ||||| | |||||||||||||||||  | ||||| || ||||  ||    ||||| || |||||||||||||  ||||||| ||||||    
T  9263 attaatagacgaaaacaaagataaaggaccaagttgatgattttaacagctatggaactaacttgaagaaaagaattaagttaaaggaccgggagttcaa 9164  T
Q  205 ttaagcctt 213  Q
    |||||||||    
T  9163 ttaagcctt 9155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 109
Target Start/End: Complemental strand, 204730 - 204633
Alignment:
Q  12 ttaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaaattga 109  Q
    |||||||||||||||||||  | |||| | ||  || || ||||||||||||||| |||||||| ||  |||||||| || |||||||||||||||||    
T  204730 ttaagtgttggtgatacacggtaagatatgatgaacttcctttatccaatggtctacttttttagggatttaaaattaataaaataggaccaaattga 204633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 88
Target Start/End: Complemental strand, 31234 - 31155
Alignment:
Q  9 aaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaatt 88  Q
    |||||| |||||||||||||||||| | |||| |||||||||  | |||||| |||||  ||||||| ||||||||||||    
T  31234 aaattaggtgttggtgatacactataaaatctgatagacctccgtaatccaacggtctgtttttttaggggattaaaatt 31155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 109
Target Start/End: Original strand, 35197 - 35302
Alignment:
Q  4 aaaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggacca 103  Q
    |||| |||||| |||||||||||||||| | | |||| |||||||||  | |||||| |||||  ||||||| ||||||||||||    |||| ||||||    
T  35197 aaaaaaaattaggtgttggtgatacactgtaaaatctgatagacctccgtaatccaacggtctgtttttttaggggattaaaattataaaaattggacca 35296  T
Q  104 aattga 109  Q
    ||||||    
T  35297 aattga 35302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 88
Target Start/End: Original strand, 83578 - 83657
Alignment:
Q  9 aaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaatt 88  Q
    |||||| |||||||||||||||||| | |||| |||||||||  | |||||| |||||  ||||||| ||||||||||||    
T  83578 aaattaggtgttggtgatacactataaaatctgatagacctccgtaatccaacggtctgtttttttaggggattaaaatt 83657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 109
Target Start/End: Complemental strand, 79615 - 79510
Alignment:
Q  4 aaaataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggacca 103  Q
    |||| |||||| |||||||||||||||| | | |||| |||||||||  | |||||| |||||  ||||||| ||||||||||||    |||| ||||||    
T  79615 aaaaaaaattaggtgttggtgatacactgtaaaatctgatagacctccgtaatccaacggtctgtttttttaggggattaaaattataaaaattggacca 79516  T
Q  104 aattga 109  Q
    ||||||    
T  79515 aattga 79510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 36; Significance: 0.00000000002; HSPs: 3)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 109
Target Start/End: Complemental strand, 32296 - 32198
Alignment:
Q  10 aattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaaattga 109  Q
    ||||| |||||||||||||| | |||||||| || | |||| |||||||||| |||| |||| | | ||| |||||||| || |||||||||||||||||    
T  32296 aattatgtgttggtgatacattgttagatctgatgggcctc-tttatccaatagtcttctttctaaggggtttaaaattaataaaataggaccaaattga 32198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 109
Target Start/End: Complemental strand, 28030 - 27927
Alignment:
Q  7 ataaattaagtgttggtgatacactattagatctcatagacctcgtttatcc--aatggtctccttttttaaggga-ttaaaattgatgaaataggacca 103  Q
    |||||||| |||||||||||||||| |||||||| || |||||| |||||||  ||| |||| | ||||||||||| |||||||| || |||||||||||    
T  28030 ataaattatgtgttggtgatacacttttagatctgatggacctc-tttatccaaaatagtcttc-tttttaagggatttaaaattaataaaataggacca 27933  T
Q  104 aattga 109  Q
    | ||||    
T  27932 acttga 27927  T

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Target: scaffold0013; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 73
Target Start/End: Complemental strand, 24791 - 24726
Alignment:
Q  7 ataaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttt 73  Q
    |||||||| |||||||||||||||| |||||||| ||  ||||| |||||||||| |||| ||||||    
T  24791 ataaattatgtgttggtgatacacttttagatctgatgcacctc-tttatccaatagtcttcttttt 24726  T

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Target: scaffold1425 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold1425
Description:

Target: scaffold1425; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 88
Target Start/End: Complemental strand, 335 - 256
Alignment:
Q  9 aaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaatt 88  Q
    |||||| ||||||||||||| || | | |||| |||||||||  | |||||| |||||| |||||||||| |||||||||    
T  335 aaattaggtgttggtgatacgctgtaaaatctgatagacctctgtaatccaacggtctctttttttaaggaattaaaatt 256  T

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Target: scaffold1425; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 1518 - 1618
Alignment:
Q  9 aaattaagtgttggtgatacactattagatctcatagacctcgtttatccaatggtctccttttttaagggattaaaattgatgaaataggaccaaattg 108  Q
    |||||| |||||||| ||||||  | | |||| |||||||||  | |||||| |||||  ||||||||||||||||||||    |||| |||||||||||    
T  1518 aaattaggtgttggttatacaccgtaaaatctgatagacctctataatccaacggtctgtttttttaagggattaaaattatcaaaattggaccaaattg 1617  T
Q  109 a 109  Q
    |    
T  1618 a 1618  T

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Target: scaffold0171 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 29118 - 29163
Alignment:
Q  1 agtaaaataaattaagtgttggtgatacactattagatctcataga 46  Q
    |||||||||||||| ||||| |||||||||| |||||||| |||||    
T  29118 agtaaaataaattaggtgttagtgatacactcttagatctgataga 29163  T

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Target: scaffold0878 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0878
Description:

Target: scaffold0878; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 2939 - 2983
Alignment:
Q  5 aaataaattaagtgttggtgatacactattagatctcatagacct 49  Q
    |||||||||| |||||||||||||||||| | |||| ||||||||    
T  2939 aaataaattaggtgttggtgatacactataaaatctgatagacct 2983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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