View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4945_low_7 (Length: 411)
Name: NF4945_low_7
Description: NF4945
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4945_low_7 |
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Alignment Details
Target: chr7 (Bit Score: 366; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 366; E-Value: 0
Query Start/End: Original strand, 10 - 387
Target Start/End: Original strand, 32557421 - 32557798
Alignment:
| Q |
10 |
attattctctgcacctcccatatttgttcccaacatttgattattataacagtcttctgatgcattctgctcccatgatgaataaaaataaccatgatcg |
109 |
Q |
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| T |
32557421 |
attattctctgcacctcccatatttgttcccaacatttgattattataacaatcttctgatgcattctgctcccatgatgaataaaaataaccatgatcg |
32557520 |
T |
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| Q |
110 |
cctccgttgaatactgaatcacctggactataacaggcagagctagtaatatccggtggcaacggaggaagctcaacattgtcgttgttaaaataggaat |
209 |
Q |
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| T |
32557521 |
cctccgttgaatactgaatcacctggactataacaggcagagctagtaatatccggtggcaacggaggaagctcaacattgtcgttgttaaaataggaat |
32557620 |
T |
|
| Q |
210 |
ttccattgttattaatgttattaatactagcctccaatgtatcaagaggaacttgatgaggaagactgtatttattgaaataattattatcatttccctc |
309 |
Q |
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| T |
32557621 |
ttccattattattaatgttattaataccagcctccaatgtatcaagaggaacttgatgaggaagactgtatttattgaaataattattatcatttccctc |
32557720 |
T |
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| Q |
310 |
accgtaaccgtaactcccagaggaagttatgattgaaaccgggtcgatagacaaccccgggttttgttgaataggaac |
387 |
Q |
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| T |
32557721 |
accgtaaccgtaactcccagaggaagttatgattgaaaccgggtcgatagacaaccccgggttttgttgaataggaac |
32557798 |
T |
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