View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4946-Insertion-5 (Length: 151)
Name: NF4946-Insertion-5
Description: NF4946
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4946-Insertion-5 |
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Alignment Details
Target: chr6 (Bit Score: 120; Significance: 1e-61; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 8 - 143
Target Start/End: Original strand, 35049883 - 35050017
Alignment:
| Q |
8 |
gtattatccatggtcattctgatatgtcacaacgtcgaatttgtgtaagcacattgtaggaagcataggggttggagaattaagtatatttgtataattg |
107 |
Q |
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| T |
35049883 |
gtattatccgtggtcattctaatatgtcacaacgtcgaatttgtgtaagcacattgtaggaagcataggggttggagaattaagtatatttgtataattg |
35049982 |
T |
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| Q |
108 |
ctttctttactattaatgtttgtaaatttgtattta |
143 |
Q |
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| T |
35049983 |
ctttctttac-attaatgtttgtaaatttgtattta |
35050017 |
T |
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Target: chr7 (Bit Score: 36; Significance: 0.00000000001; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 88 - 143
Target Start/End: Complemental strand, 35159739 - 35159685
Alignment:
| Q |
88 |
taagtatatttgtataattgctttctttactattaatgtttgtaaatttgtattta |
143 |
Q |
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| T |
35159739 |
taagtttatttgtatatttg-tttctttactattaatgtttgtacatttgtattta |
35159685 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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