View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4946-Insertion-8 (Length: 147)
Name: NF4946-Insertion-8
Description: NF4946
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4946-Insertion-8 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 139; Significance: 4e-73; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 139; E-Value: 4e-73
Query Start/End: Original strand, 9 - 147
Target Start/End: Complemental strand, 45203137 - 45202999
Alignment:
| Q |
9 |
cacatatgatacaatgaagcaagcacatatgatacaagtcagcatataccaatatagtgttatttttatgtgaattatatgacatgatacatgtatgtat |
108 |
Q |
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| T |
45203137 |
cacatatgatacaatgaagcaagcacatatgatacaagtcagcatataccaatatagtgttatttttatgtgaattatatgacatgatacatgtatgtat |
45203038 |
T |
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| Q |
109 |
aatggaggctataaataggggaagattgcattcactctt |
147 |
Q |
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| T |
45203037 |
aatggaggctataaataggggaagattgcattcactctt |
45202999 |
T |
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Target: chr4 (Bit Score: 38; Significance: 0.0000000000008; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.0000000000008
Query Start/End: Original strand, 46 - 104
Target Start/End: Complemental strand, 10418709 - 10418647
Alignment:
| Q |
46 |
gtcagcatatacca----atatagtgttatttttatgtgaattatatgacatgatacatgtat |
104 |
Q |
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| T |
10418709 |
gtcagcatataccactatatatagtgttatttttatgtgaattatatgatatgattcatgtat |
10418647 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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