View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4946_high_2 (Length: 710)

Name: NF4946_high_2
Description: NF4946
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4946_high_2
NF4946_high_2
[»] chr8 (17 HSPs)
chr8 (646-702)||(13152393-13152449)
chr8 (650-702)||(9256513-9256565)
chr8 (650-702)||(27190895-27190947)
chr8 (651-702)||(24592336-24592387)
chr8 (646-702)||(10467871-10467927)
chr8 (648-702)||(40146009-40146063)
chr8 (649-702)||(42447048-42447101)
chr8 (646-702)||(28846725-28846781)
chr8 (646-701)||(21958632-21958687)
chr8 (646-702)||(10014434-10014490)
chr8 (646-702)||(30791457-30791513)
chr8 (650-702)||(32342940-32342992)
chr8 (650-702)||(32355427-32355479)
chr8 (650-702)||(32359546-32359598)
chr8 (651-702)||(24333842-24333893)
chr8 (650-697)||(32372082-32372129)
chr8 (646-683)||(16532649-16532686)
[»] chr6 (5 HSPs)
chr6 (646-702)||(32441973-32442029)
chr6 (646-702)||(11971079-11971135)
chr6 (646-702)||(25599275-25599331)
chr6 (646-701)||(12180525-12180580)
chr6 (649-702)||(25340568-25340620)
[»] chr4 (7 HSPs)
chr4 (646-702)||(3074489-3074545)
chr4 (646-702)||(53693033-53693089)
chr4 (646-702)||(31944736-31944792)
chr4 (646-702)||(4325531-4325587)
chr4 (650-702)||(12211225-12211277)
chr4 (651-702)||(1147624-1147675)
chr4 (650-683)||(48130099-48130132)
[»] chr7 (12 HSPs)
chr7 (646-702)||(9230521-9230577)
chr7 (646-697)||(8638735-8638786)
chr7 (650-698)||(26782317-26782365)
chr7 (648-699)||(14088870-14088921)
chr7 (648-699)||(14398888-14398939)
chr7 (646-702)||(23179885-23179940)
chr7 (646-702)||(26493713-26493769)
chr7 (646-701)||(19400098-19400153)
chr7 (646-702)||(9557808-9557864)
chr7 (649-701)||(27387306-27387358)
chr7 (646-702)||(45197763-45197819)
chr7 (650-701)||(38575289-38575340)
[»] chr1 (15 HSPs)
chr1 (646-702)||(48606611-48606667)
chr1 (646-702)||(52753819-52753875)
chr1 (646-702)||(9637241-9637297)
chr1 (650-702)||(30054945-30054997)
chr1 (646-702)||(40864718-40864774)
chr1 (651-705)||(170445-170500)
chr1 (650-701)||(11843899-11843950)
chr1 (651-702)||(30559004-30559055)
chr1 (646-699)||(26272931-26272984)
chr1 (650-702)||(14499021-14499073)
chr1 (650-698)||(32379859-32379907)
chr1 (646-692)||(25017506-25017552)
chr1 (646-684)||(28463215-28463253)
chr1 (650-683)||(33489827-33489860)
chr1 (650-683)||(41972269-41972302)
[»] chr5 (8 HSPs)
chr5 (646-702)||(27168802-27168858)
chr5 (648-699)||(3055604-3055655)
chr5 (649-702)||(22712898-22712951)
chr5 (650-702)||(203974-204026)
chr5 (646-702)||(2229035-2229091)
chr5 (646-702)||(22542006-22542062)
chr5 (651-702)||(11852840-11852891)
chr5 (653-702)||(8785909-8785958)
[»] chr2 (7 HSPs)
chr2 (650-702)||(12539697-12539749)
chr2 (649-699)||(33453190-33453240)
chr2 (646-680)||(31392520-31392554)
chr2 (649-694)||(34317480-34317525)
chr2 (646-702)||(13309709-13309765)
chr2 (646-699)||(19951833-19951886)
chr2 (661-702)||(31392931-31392972)
[»] chr3 (8 HSPs)
chr3 (651-702)||(9743393-9743444)
chr3 (651-702)||(3856875-3856926)
chr3 (646-701)||(51408609-51408664)
chr3 (650-696)||(51262103-51262149)
chr3 (646-702)||(24988812-24988868)
chr3 (651-699)||(43137251-43137299)
chr3 (646-701)||(53710518-53710573)
chr3 (649-682)||(38282530-38282563)
[»] scaffold0726 (1 HSPs)
scaffold0726 (646-702)||(1003-1059)
[»] scaffold0015 (1 HSPs)
scaffold0015 (646-701)||(214161-214216)
[»] scaffold0019 (1 HSPs)
scaffold0019 (646-702)||(134853-134909)
[»] scaffold0198 (1 HSPs)
scaffold0198 (648-702)||(1518-1572)
[»] scaffold0002 (1 HSPs)
scaffold0002 (650-683)||(435366-435399)


Alignment Details
Target: chr8 (Bit Score: 49; Significance: 1e-18; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 646 - 702
Target Start/End: Complemental strand, 13152449 - 13152393
Alignment:
Q  646 agggcatttacctcttaattttatttagcacactattggcaagttatgtttcatctc 702  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  13152449 agggcatttacctcctaattttatttagcacactattgacaagttatgtttcatctc 13152393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 650 - 702
Target Start/End: Original strand, 9256513 - 9256565
Alignment:
Q  650 catttacctcttaattttatttagcacactattggcaagttatgtttcatctc 702  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  9256513 catttacctcctaattttatttagcacactattgacaagttatgtttcatctc 9256565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 650 - 702
Target Start/End: Original strand, 27190895 - 27190947
Alignment:
Q  650 catttacctcttaattttatttagcacactattggcaagttatgtttcatctc 702  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  27190895 catttacctcctaattttatttagtacactattggcaagttatgtttcatctc 27190947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 651 - 702
Target Start/End: Complemental strand, 24592387 - 24592336
Alignment:
Q  651 atttacctcttaattttatttagcacactattggcaagttatgtttcatctc 702  Q
    ||||||||| |||||||||||||||||||||||||| |||||||||||||||    
T  24592387 atttacctcctaattttatttagcacactattggcaggttatgtttcatctc 24592336  T

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Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 646 - 702
Target Start/End: Original strand, 10467871 - 10467927
Alignment:
Q  646 agggcatttacctcttaattttatttagcacactattggcaagttatgtttcatctc 702  Q
    |||| ||||||||| ||||||||||||||||| ||||| ||||||||||||||||||    
T  10467871 agggtatttacctcataattttatttagcacaatattgacaagttatgtttcatctc 10467927  T

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Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 648 - 702
Target Start/End: Complemental strand, 40146063 - 40146009
Alignment:
Q  648 ggcatttacctcttaattttatttagcacactattggcaagttatgtttcatctc 702  Q
    ||||| |||||| ||||||||||||||||||||||||||  ||||||||||||||    
T  40146063 ggcatctacctcctaattttatttagcacactattggcagattatgtttcatctc 40146009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 649 - 702
Target Start/End: Original strand, 42447048 - 42447101
Alignment:
Q  649 gcatttacctcttaattttatttagcacactattggcaagttatgtttcatctc 702  Q
    ||||||||||| |||||||||||||||||||| || |||||||| |||||||||    
T  42447048 gcatttacctcctaattttatttagcacactaatgacaagttatatttcatctc 42447101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 646 - 702
Target Start/End: Original strand, 28846725 - 28846781
Alignment:
Q  646 agggcatttacctcttaattttatttagcacactattggcaagttatgtttcatctc 702  Q
    |||||||||||||| ||||||||||||||||||| ||| ||  ||||||||||||||    
T  28846725 agggcatttacctcataattttatttagcacacttttgacagattatgtttcatctc 28846781  T

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Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 646 - 701
Target Start/End: Original strand, 21958632 - 21958687
Alignment:
Q  646 agggcatttacctcttaattttatttagcacactattggcaagttatgtttcatct 701  Q
    |||| ||||||||| |||||||||||||||| ||||||||| ||||| ||||||||    
T  21958632 agggaatttacctcctaattttatttagcacgctattggcaggttatatttcatct 21958687  T

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Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 646 - 702
Target Start/End: Complemental strand, 10014490 - 10014434
Alignment:
Q  646 agggcatttacctcttaattttatttagcacactattggcaagttatgtttcatctc 702  Q
    |||||||||||||| ||||||||||||||||| ||||| ||  |||| |||||||||    
T  10014490 agggcatttacctcctaattttatttagcacattattgacatattatatttcatctc 10014434  T

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Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 646 - 702
Target Start/End: Complemental strand, 30791513 - 30791457
Alignment:
Q  646 agggcatttacctcttaattttatttagcacactattggcaagttatgtttcatctc 702  Q
    |||||||||||| | |||||||||||||||| |||||| || ||||| |||||||||    
T  30791513 agggcatttaccacctaattttatttagcacgctattgacaggttatatttcatctc 30791457  T

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Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 650 - 702
Target Start/End: Original strand, 32342940 - 32342992
Alignment:
Q  650 catttacctcttaattttatttagcacactattggcaagttatgtttcatctc 702  Q
    |||||||||| |||||||||||||||||| ||||| | ||||| |||||||||    
T  32342940 catttacctcctaattttatttagcacaccattggtatgttatatttcatctc 32342992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 650 - 702
Target Start/End: Original strand, 32355427 - 32355479
Alignment:
Q  650 catttacctcttaattttatttagcacactattggcaagttatgtttcatctc 702  Q
    |||||||||| |||||||||||||||||| ||||| | ||||| |||||||||    
T  32355427 catttacctcctaattttatttagcacaccattggtatgttatatttcatctc 32355479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 650 - 702
Target Start/End: Original strand, 32359546 - 32359598
Alignment:
Q  650 catttacctcttaattttatttagcacactattggcaagttatgtttcatctc 702  Q
    |||||||||| |||||||||||||||||||||||| |  |||| |||||||||    
T  32359546 catttacctcctaattttatttagcacactattggtagattatatttcatctc 32359598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 651 - 702
Target Start/End: Original strand, 24333842 - 24333893
Alignment:
Q  651 atttacctcttaattttatttagcacactattggcaagttatgtttcatctc 702  Q
    ||||||||| | ||||||||||||||||||||| |  |||||||||||||||    
T  24333842 atttacctcatgattttatttagcacactattgaccggttatgtttcatctc 24333893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 650 - 697
Target Start/End: Original strand, 32372082 - 32372129
Alignment:
Q  650 catttacctcttaattttatttagcacactattggcaagttatgtttc 697  Q
    |||||||||| |||||||||||||||||||||||| | ||||| ||||    
T  32372082 catttacctcctaattttatttagcacactattggtaggttatatttc 32372129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 646 - 683
Target Start/End: Complemental strand, 16532686 - 16532649
Alignment:
Q  646 agggcatttacctcttaattttatttagcacactattg 683  Q
    |||||||||||||| |||||||||||||||| ||||||    
T  16532686 agggcatttacctcctaattttatttagcacgctattg 16532649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 49; Significance: 1e-18; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 646 - 702
Target Start/End: Complemental strand, 32442029 - 32441973
Alignment:
Q  646 agggcatttacctcttaattttatttagcacactattggcaagttatgtttcatctc 702  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  32442029 agggcatttacctcttaattttatttagcacaccattggcaagttatgttttatctc 32441973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 646 - 702
Target Start/End: Original strand, 11971079 - 11971135
Alignment:
Q  646 agggcatttacctcttaattttatttagcacactattggcaagttatgtttcatctc 702  Q
    |||||||||||||| ||||||||||||||||||||||| || |||||||||||||||    
T  11971079 agggcatttacctcctaattttatttagcacactattgacaggttatgtttcatctc 11971135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 646 - 702
Target Start/End: Original strand, 25599275 - 25599331
Alignment:
Q  646 agggcatttacctcttaattttatttagcacactattggcaagttatgtttcatctc 702  Q
    ||||||||||| || |||||| ||||| ||||||||||||||||||| |||||||||    
T  25599275 agggcatttacgtcctaatttgatttaacacactattggcaagttatatttcatctc 25599331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 646 - 701
Target Start/End: Complemental strand, 12180580 - 12180525
Alignment:
Q  646 agggcatttacctcttaattttatttagcacactattggcaagttatgtttcatct 701  Q
    |||||||||||||  ||||||||||||||||| ||||| || ||||||||||||||    
T  12180580 agggcatttaccttctaattttatttagcacattattgacaggttatgtttcatct 12180525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 649 - 702
Target Start/End: Original strand, 25340568 - 25340620
Alignment:
Q  649 gcatttacctcttaattttatttagcacactattggcaagttatgtttcatctc 702  Q
    ||||||||||| |||||||||| | |||||||||||||  ||||||||||||||    
T  25340568 gcatttacctcctaattttattaa-cacactattggcagattatgtttcatctc 25340620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 1e-18; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 646 - 702
Target Start/End: Original strand, 3074489 - 3074545
Alignment:
Q  646 agggcatttacctcttaattttatttagcacactattggcaagttatgtttcatctc 702  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  3074489 agggcatttatctcctaattttatttagcacactattggcaagttatgtttcatctc 3074545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 646 - 702
Target Start/End: Complemental strand, 53693089 - 53693033
Alignment:
Q  646 agggcatttacctcttaattttatttagcacactattggcaagttatgtttcatctc 702  Q
    |||||||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  53693089 agggcattcacctcttaatttcatttagcacactattggcaagttatgtttcatctc 53693033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 646 - 702
Target Start/End: Original strand, 31944736 - 31944792
Alignment:
Q  646 agggcatttacctcttaattttatttagcacactattggcaagttatgtttcatctc 702  Q
    |||||||||||||| ||||||||||||| ||||||||| ||||||||||||||||||    
T  31944736 agggcatttacctcctaattttatttagtacactattgacaagttatgtttcatctc 31944792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 646 - 702
Target Start/End: Original strand, 4325531 - 4325587
Alignment:
Q  646 agggcatttacctcttaattttatttagcacactattggcaagttatgtttcatctc 702  Q
    |||||| ||||||| ||||||||||||||||||||||| || |||||||| ||||||    
T  4325531 agggcaattacctcctaattttatttagcacactattgacaggttatgttgcatctc 4325587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 650 - 702
Target Start/End: Complemental strand, 12211277 - 12211225
Alignment:
Q  650 catttacctcttaattttatttagcacactattggcaagttatgtttcatctc 702  Q
    |||||||||| |||||||||||||||||||||||| | ||||| |||||||||    
T  12211277 catttacctcctaattttatttagcacactattggtaggttatatttcatctc 12211225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 651 - 702
Target Start/End: Original strand, 1147624 - 1147675
Alignment:
Q  651 atttacctcttaattttatttagcacactattggcaagttatgtttcatctc 702  Q
    ||||||||| ||||||| ||||  ||||||||| ||||||||||||||||||    
T  1147624 atttacctcctaattttctttaaaacactattgacaagttatgtttcatctc 1147675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 650 - 683
Target Start/End: Original strand, 48130099 - 48130132
Alignment:
Q  650 catttacctcttaattttatttagcacactattg 683  Q
    |||||||||| |||||||||||||||||||||||    
T  48130099 catttacctcctaattttatttagcacactattg 48130132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 3e-16; HSPs: 12)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 646 - 702
Target Start/End: Original strand, 9230521 - 9230577
Alignment:
Q  646 agggcatttacctcttaattttatttagcacactattggcaagttatgtttcatctc 702  Q
    |||||||||||||| ||||||||||||||||||||||| |||| |||||||||||||    
T  9230521 agggcatttacctcctaattttatttagcacactattgacaaggtatgtttcatctc 9230577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 646 - 697
Target Start/End: Original strand, 8638735 - 8638786
Alignment:
Q  646 agggcatttacctcttaattttatttagcacactattggcaagttatgtttc 697  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  8638735 agggcatttacctcctaattttatttagcacactatcggcaagttatgtttc 8638786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 650 - 698
Target Start/End: Complemental strand, 26782365 - 26782317
Alignment:
Q  650 catttacctcttaattttatttagcacactattggcaagttatgtttca 698  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  26782365 catttacctcctaattttatttagcacactattgacaagttatgtttca 26782317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 648 - 699
Target Start/End: Original strand, 14088870 - 14088921
Alignment:
Q  648 ggcatttacctcttaattttatttagcacactattggcaagttatgtttcat 699  Q
    |||||||||||| ||||||||||||||||||||||| |||||||| ||||||    
T  14088870 ggcatttacctcctaattttatttagcacactattgacaagttatatttcat 14088921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 648 - 699
Target Start/End: Original strand, 14398888 - 14398939
Alignment:
Q  648 ggcatttacctcttaattttatttagcacactattggcaagttatgtttcat 699  Q
    |||||||||||| ||||||||||||||||||||||| |||||||| ||||||    
T  14398888 ggcatttacctcctaattttatttagcacactattgacaagttatatttcat 14398939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 646 - 702
Target Start/End: Complemental strand, 23179940 - 23179885
Alignment:
Q  646 agggcatttacctcttaattttatttagcacactattggcaagttatgtttcatctc 702  Q
    ||||||||||| || |||||| |||||||||||||||| ||||||||||||||||||    
T  23179940 agggcatttac-tcctaatttaatttagcacactattgacaagttatgtttcatctc 23179885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 646 - 702
Target Start/End: Complemental strand, 26493769 - 26493713
Alignment:
Q  646 agggcatttacctcttaattttatttagcacactattggcaagttatgtttcatctc 702  Q
    |||||||||||||| |||||||||||||||| |||||| || ||||| |||||||||    
T  26493769 agggcatttacctcctaattttatttagcacgctattgacaggttatatttcatctc 26493713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 646 - 701
Target Start/End: Original strand, 19400098 - 19400153
Alignment:
Q  646 agggcatttacctcttaattttatttagcacactattggcaagttatgtttcatct 701  Q
    |||| ||||||||| |||||||||||||||| ||||||||| ||||| ||||||||    
T  19400098 agggtatttacctcctaattttatttagcacgctattggcaggttatatttcatct 19400153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 646 - 702
Target Start/End: Original strand, 9557808 - 9557864
Alignment:
Q  646 agggcatttacctcttaattttatttagcacactattggcaagttatgtttcatctc 702  Q
    |||| ||||||||| |||||||||||||||||||||| | | |||| ||||||||||    
T  9557808 aggggatttacctcctaattttatttagcacactattcggaggttaagtttcatctc 9557864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 649 - 701
Target Start/End: Complemental strand, 27387358 - 27387306
Alignment:
Q  649 gcatttacctcttaattttatttagcacactattggcaagttatgtttcatct 701  Q
    ||||||||||| |||||||||||||||| |||||| || ||||| ||||||||    
T  27387358 gcatttacctcctaattttatttagcacgctattgacaggttatatttcatct 27387306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 646 - 702
Target Start/End: Original strand, 45197763 - 45197819
Alignment:
Q  646 agggcatttacctcttaattttatttagcacactattggcaagttatgtttcatctc 702  Q
    ||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||||    
T  45197763 agggcatttacatcctaattttatttagcaccctattggtaggttatatttcatctc 45197819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 650 - 701
Target Start/End: Complemental strand, 38575340 - 38575289
Alignment:
Q  650 catttacctcttaattttatttagcacactattggcaagttatgtttcatct 701  Q
    |||||||||| |||||||||||||||| |||||| || ||||| ||||||||    
T  38575340 catttacctcctaattttatttagcacgctattgacaggttatatttcatct 38575289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 3e-16; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 646 - 702
Target Start/End: Complemental strand, 48606667 - 48606611
Alignment:
Q  646 agggcatttacctcttaattttatttagcacactattggcaagttatgtttcatctc 702  Q
    |||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||    
T  48606667 agggcatttacctcataattttatttagcacactattggcagattatgtttcatctc 48606611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 646 - 702
Target Start/End: Complemental strand, 52753875 - 52753819
Alignment:
Q  646 agggcatttacctcttaattttatttagcacactattggcaagttatgtttcatctc 702  Q
    |||| ||||||||| ||||||||| ||||||||||||| ||||||||||||||||||    
T  52753875 agggtatttacctcctaattttatctagcacactattgacaagttatgtttcatctc 52753819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 646 - 702
Target Start/End: Original strand, 9637241 - 9637297
Alignment:
Q  646 agggcatttacctcttaattttatttagcacactattggcaagttatgtttcatctc 702  Q
    ||||||||||| || |||||||||||||||||||||||  | |||||||||||||||    
T  9637241 agggcatttacatcctaattttatttagcacactattgataggttatgtttcatctc 9637297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 650 - 702
Target Start/End: Original strand, 30054945 - 30054997
Alignment:
Q  650 catttacctcttaattttatttagcacactattggcaagttatgtttcatctc 702  Q
    |||||||||| ||||||||||||||||| ||||| || |||||||||||||||    
T  30054945 catttacctcctaattttatttagcacattattgacacgttatgtttcatctc 30054997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 646 - 702
Target Start/End: Complemental strand, 40864774 - 40864718
Alignment:
Q  646 agggcatttacctcttaattttatttagcacactattggcaagttatgtttcatctc 702  Q
    |||||||||||||| ||||||||||||||||||||||  || |||||||| ||||||    
T  40864774 agggcatttacctcctaattttatttagcacactattaacaggttatgttacatctc 40864718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 651 - 705
Target Start/End: Complemental strand, 170500 - 170445
Alignment:
Q  651 atttacctcttaattttatttagcacactattggcaa-gttatgtttcatctcact 705  Q
    ||||||||| ||||||||||||||||| ||||||||| ||||| ||||||||||||    
T  170500 atttacctcctaattttatttagcacattattggcaaggttatatttcatctcact 170445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 650 - 701
Target Start/End: Complemental strand, 11843950 - 11843899
Alignment:
Q  650 catttacctcttaattttatttagcacactattggcaagttatgtttcatct 701  Q
    |||||||||| |||||||||||||||||||||||| | ||||| ||||||||    
T  11843950 catttacctcctaattttatttagcacactattggtaggttatatttcatct 11843899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 651 - 702
Target Start/End: Complemental strand, 30559055 - 30559004
Alignment:
Q  651 atttacctcttaattttatttagcacactattggcaagttatgtttcatctc 702  Q
    ||||||||| |||||||||||||||||||||||| |  ||||||||||||||    
T  30559055 atttacctcctaattttatttagcacactattggtagattatgtttcatctc 30559004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 646 - 699
Target Start/End: Complemental strand, 26272984 - 26272931
Alignment:
Q  646 agggcatttacctcttaattttatttagcacactattggcaagttatgtttcat 699  Q
    |||||| ||||||  |||||||||||||||||||||||||| ||||| ||||||    
T  26272984 agggcaattacctactaattttatttagcacactattggcatgttatatttcat 26272931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 650 - 702
Target Start/End: Original strand, 14499021 - 14499073
Alignment:
Q  650 catttacctcttaattttatttagcacactattggcaagttatgtttcatctc 702  Q
    |||||||||| ||||| ||||||  ||||||||| ||||||||||||||||||    
T  14499021 catttacctcctaattatatttaaaacactattgacaagttatgtttcatctc 14499073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 650 - 698
Target Start/End: Complemental strand, 32379907 - 32379859
Alignment:
Q  650 catttacctcttaattttatttagcacactattggcaagttatgtttca 698  Q
    |||||||||| ||||||||||||||||||||||| || |||||| ||||    
T  32379907 catttacctcctaattttatttagcacactattgacaggttatgattca 32379859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 646 - 692
Target Start/End: Original strand, 25017506 - 25017552
Alignment:
Q  646 agggcatttacctcttaattttatttagcacactattggcaagttat 692  Q
    ||||||| |||||| ||||||||||||||||||||||| || |||||    
T  25017506 agggcatatacctcctaattttatttagcacactattgacaggttat 25017552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 646 - 684
Target Start/End: Original strand, 28463215 - 28463253
Alignment:
Q  646 agggcatttacctcttaattttatttagcacactattgg 684  Q
    |||||||| ||||| ||||||||||||||||||||||||    
T  28463215 agggcattcacctcctaattttatttagcacactattgg 28463253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 650 - 683
Target Start/End: Original strand, 33489827 - 33489860
Alignment:
Q  650 catttacctcttaattttatttagcacactattg 683  Q
    |||||||||| |||||||||||||||||||||||    
T  33489827 catttacctcctaattttatttagcacactattg 33489860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 650 - 683
Target Start/End: Complemental strand, 41972302 - 41972269
Alignment:
Q  650 catttacctcttaattttatttagcacactattg 683  Q
    |||||||||| |||||||||||||||||||||||    
T  41972302 catttacctcctaattttatttagcacactattg 41972269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 646 - 702
Target Start/End: Complemental strand, 27168858 - 27168802
Alignment:
Q  646 agggcatttacctcttaattttatttagcacactattggcaagttatgtttcatctc 702  Q
    |||||||||||||| ||||||||||||||||||||||||   |||||||||||||||    
T  27168858 agggcatttacctcctaattttatttagcacactattggatggttatgtttcatctc 27168802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 648 - 699
Target Start/End: Original strand, 3055604 - 3055655
Alignment:
Q  648 ggcatttacctcttaattttatttagcacactattggcaagttatgtttcat 699  Q
    |||||||||||| ||||||||||||||||||||||| ||| |||||||||||    
T  3055604 ggcatttacctcctaattttatttagcacactattgacaatttatgtttcat 3055655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 649 - 702
Target Start/End: Complemental strand, 22712951 - 22712898
Alignment:
Q  649 gcatttacctcttaattttatttagcacactattggcaagttatgtttcatctc 702  Q
    ||||||||||| ||||||||||||||||||||||| || |||||||| ||||||    
T  22712951 gcatttacctcctaattttatttagcacactattgtcatgttatgttacatctc 22712898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 650 - 702
Target Start/End: Original strand, 203974 - 204026
Alignment:
Q  650 catttacctcttaattttatttagcacactattggcaagttatgtttcatctc 702  Q
    |||||||||| ||||||||||||||||||||||| ||| |||| |||||||||    
T  203974 catttacctcctaattttatttagcacactattgacaaattatatttcatctc 204026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 646 - 702
Target Start/End: Original strand, 2229035 - 2229091
Alignment:
Q  646 agggcatttacctcttaattttatttagcacactattggcaagttatgtttcatctc 702  Q
    |||||||||||||| |||||||||||||||| ||||||| | ||||| |||||||||    
T  2229035 agggcatttacctcctaattttatttagcacgctattggtaggttatatttcatctc 2229091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 646 - 702
Target Start/End: Original strand, 22542006 - 22542062
Alignment:
Q  646 agggcatttacctcttaattttatttagcacactattggcaagttatgtttcatctc 702  Q
    |||||||||||||| |||||||||||||||| |||||| || ||||| |||| ||||    
T  22542006 agggcatttacctcataattttatttagcacgctattgtcaggttatatttcttctc 22542062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 651 - 702
Target Start/End: Original strand, 11852840 - 11852891
Alignment:
Q  651 atttacctcttaattttatttagcacactattggcaagttatgtttcatctc 702  Q
    ||||||||  ||||||||||||||||||||||| ||| |||| |||||||||    
T  11852840 atttaccttctaattttatttagcacactattgacaaattatctttcatctc 11852891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 653 - 702
Target Start/End: Original strand, 8785909 - 8785958
Alignment:
Q  653 ttacctcttaattttatttagcacactattggcaagttatgtttcatctc 702  Q
    ||||||| ||||||||||||||| | ||||| || |||||||||||||||    
T  8785909 ttacctcctaattttatttagcatattattgacaggttatgtttcatctc 8785958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 650 - 702
Target Start/End: Original strand, 12539697 - 12539749
Alignment:
Q  650 catttacctcttaattttatttagcacactattggcaagttatgtttcatctc 702  Q
    |||||||||| ||||||||||||||||||||||| || |||||||||||||||    
T  12539697 catttacctcctaattttatttagcacactattgacacgttatgtttcatctc 12539749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 649 - 699
Target Start/End: Complemental strand, 33453240 - 33453190
Alignment:
Q  649 gcatttacctcttaattttatttagcacactattggcaagttatgtttcat 699  Q
    ||||||||||| ||||||||||||||| |||||||||||||||| ||||||    
T  33453240 gcatttacctcctaattttatttagcagactattggcaagttatatttcat 33453190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 646 - 680
Target Start/End: Original strand, 31392520 - 31392554
Alignment:
Q  646 agggcatttacctcttaattttatttagcacacta 680  Q
    |||||||||||||||||||||||||||||||||||    
T  31392520 agggcatttacctcttaattttatttagcacacta 31392554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 649 - 694
Target Start/End: Complemental strand, 34317525 - 34317480
Alignment:
Q  649 gcatttacctcttaattttatttagcacactattggcaagttatgt 694  Q
    ||||||||||| |||||||| ||||||||||||||||| |||||||    
T  34317525 gcatttacctcctaattttaattagcacactattggcaggttatgt 34317480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 646 - 702
Target Start/End: Original strand, 13309709 - 13309765
Alignment:
Q  646 agggcatttacctcttaattttatttagcacactattggcaagttatgtttcatctc 702  Q
    |||||||||||||| |||| |||||||||||||||||| ||  |||| |||||||||    
T  13309709 agggcatttacctcataatattatttagcacactattgacagattatatttcatctc 13309765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 646 - 699
Target Start/End: Complemental strand, 19951886 - 19951833
Alignment:
Q  646 agggcatttacctcttaattttatttagcacactattggcaagttatgtttcat 699  Q
    |||||||||||||  |||||| |||||||||||||||| || ||||| ||||||    
T  19951886 agggcatttaccttctaatttaatttagcacactattgacaggttatatttcat 19951833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 661 - 702
Target Start/End: Original strand, 31392931 - 31392972
Alignment:
Q  661 taattttatttagcacactattggcaagttatgtttcatctc 702  Q
    ||||||||||||||||||||||| || |||||||| ||||||    
T  31392931 taattttatttagcacactattgacaggttatgttacatctc 31392972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 8)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 651 - 702
Target Start/End: Original strand, 9743393 - 9743444
Alignment:
Q  651 atttacctcttaattttatttagcacactattggcaagttatgtttcatctc 702  Q
    ||||||||| |||||||||||||||||||||||| | |||||||||||||||    
T  9743393 atttacctcgtaattttatttagcacactattggtaggttatgtttcatctc 9743444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 651 - 702
Target Start/End: Complemental strand, 3856926 - 3856875
Alignment:
Q  651 atttacctcttaattttatttagcacactattggcaagttatgtttcatctc 702  Q
    ||||||||| ||||||||||||||||| |||||||| || ||||||||||||    
T  3856926 atttacctcctaattttatttagcacattattggcatgtaatgtttcatctc 3856875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 646 - 701
Target Start/End: Complemental strand, 51408664 - 51408609
Alignment:
Q  646 agggcatttacctcttaattttatttagcacactattggcaagttatgtttcatct 701  Q
    |||||||||||||| |||||||||||||||| |||||| || ||||| ||||||||    
T  51408664 agggcatttacctcctaattttatttagcacgctattgacatgttatatttcatct 51408609  T

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Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 650 - 696
Target Start/End: Original strand, 51262103 - 51262149
Alignment:
Q  650 catttacctcttaattttatttagcacactattggcaagttatgttt 696  Q
    |||||||||| ||||||||||||||||||||||| || |||||||||    
T  51262103 catttacctcctaattttatttagcacactattgacaggttatgttt 51262149  T

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Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 646 - 702
Target Start/End: Complemental strand, 24988868 - 24988812
Alignment:
Q  646 agggcatttacctcttaattttatttagcacactattggcaagttatgtttcatctc 702  Q
    ||||||| || ||| ||||||||||||||||||||||| ||  ||||||||||||||    
T  24988868 agggcatgtatctcctaattttatttagcacactattgccagattatgtttcatctc 24988812  T

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Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 651 - 699
Target Start/End: Original strand, 43137251 - 43137299
Alignment:
Q  651 atttacctcttaattttatttagcacactattggcaagttatgtttcat 699  Q
    ||||||||| ||||||||||||||||||||||||||  |||| ||||||    
T  43137251 atttacctcctaattttatttagcacactattggcagattatatttcat 43137299  T

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Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 646 - 701
Target Start/End: Original strand, 53710518 - 53710573
Alignment:
Q  646 agggcatttacctcttaattttatttagcacactattggcaagttatgtttcatct 701  Q
    |||||||||||||| |||||||||||||||| |||||| || ||||| ||| ||||    
T  53710518 agggcatttacctcctaattttatttagcacgctattgacaggttatattttatct 53710573  T

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Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 649 - 682
Target Start/End: Original strand, 38282530 - 38282563
Alignment:
Q  649 gcatttacctcttaattttatttagcacactatt 682  Q
    ||||||||||| ||||||||||||||||||||||    
T  38282530 gcatttacctcataattttatttagcacactatt 38282563  T

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Target: scaffold0726 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0726
Description:

Target: scaffold0726; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 646 - 702
Target Start/End: Original strand, 1003 - 1059
Alignment:
Q  646 agggcatttacctcttaattttatttagcacactattggcaagttatgtttcatctc 702  Q
    |||||||||| ||| ||||||||||||||||||||||| ||  ||||||||||||||    
T  1003 agggcatttatctcctaattttatttagcacactattgccagattatgtttcatctc 1059  T

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Target: scaffold0015 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 646 - 701
Target Start/End: Complemental strand, 214216 - 214161
Alignment:
Q  646 agggcatttacctcttaattttatttagcacactattggcaagttatgtttcatct 701  Q
    |||| ||||||||| |||||||||||||||| ||||||||| ||||| ||||||||    
T  214216 agggaatttacctcctaattttatttagcacgctattggcaggttatatttcatct 214161  T

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Target: scaffold0019 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 646 - 702
Target Start/End: Complemental strand, 134909 - 134853
Alignment:
Q  646 agggcatttacctcttaattttatttagcacactattggcaagttatgtttcatctc 702  Q
    |||||||||||||| |||||||||||||||| ||||||  | ||||| |||||||||    
T  134909 agggcatttacctcctaattttatttagcacgctattgataggttatatttcatctc 134853  T

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Target: scaffold0198 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 648 - 702
Target Start/End: Original strand, 1518 - 1572
Alignment:
Q  648 ggcatttacctcttaattttatttagcacactattggcaagttatgtttcatctc 702  Q
    ||||||| |||| ||||||||||||||| ||||| |||| | |||||||||||||    
T  1518 ggcatttgcctcctaattttatttagcatactatcggcatgctatgtttcatctc 1572  T

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Target: scaffold0002 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 650 - 683
Target Start/End: Complemental strand, 435399 - 435366
Alignment:
Q  650 catttacctcttaattttatttagcacactattg 683  Q
    |||||||||| |||||||||||||||||||||||    
T  435399 catttacctcctaattttatttagcacactattg 435366  T

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