View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4947-Insertion-2 (Length: 504)

Name: NF4947-Insertion-2
Description: NF4947
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4947-Insertion-2
NF4947-Insertion-2
[»] chr5 (50 HSPs)
chr5 (8-504)||(706323-706830)
chr5 (68-284)||(39105384-39105600)
chr5 (60-133)||(12425483-12425556)
chr5 (71-133)||(5963367-5963429)
chr5 (71-175)||(42582835-42582939)
chr5 (83-138)||(6593235-6593290)
chr5 (71-222)||(9202744-9202895)
chr5 (186-245)||(16937856-16937915)
chr5 (68-167)||(42569031-42569130)
chr5 (186-284)||(10639991-10640088)
chr5 (63-133)||(19460471-19460541)
chr5 (68-132)||(1465105-1465169)
chr5 (73-129)||(4014513-4014569)
chr5 (70-240)||(8334500-8334663)
chr5 (186-245)||(7808543-7808602)
chr5 (186-245)||(16457952-16458011)
chr5 (79-130)||(34112806-34112857)
chr5 (187-242)||(42646706-42646761)
chr5 (186-240)||(35446093-35446147)
chr5 (79-129)||(40590458-40590508)
chr5 (89-170)||(14932231-14932311)
chr5 (79-123)||(11054117-11054161)
chr5 (69-133)||(11835198-11835262)
chr5 (81-133)||(37112343-37112395)
chr5 (69-117)||(42573880-42573928)
chr5 (186-245)||(17258857-17258915)
chr5 (186-245)||(32859693-32859751)
chr5 (186-245)||(32861865-32861923)
chr5 (85-136)||(37063156-37063207)
chr5 (85-152)||(40452228-40452295)
chr5 (70-152)||(3566384-3566466)
chr5 (71-133)||(7674571-7674633)
chr5 (186-240)||(12857316-12857370)
chr5 (70-128)||(28776897-28776955)
chr5 (186-240)||(28777031-28777085)
chr5 (186-236)||(40426803-40426853)
chr5 (60-122)||(40848669-40848731)
chr5 (186-240)||(42582666-42582720)
chr5 (65-122)||(5559647-5559704)
chr5 (92-133)||(7853602-7853643)
chr5 (195-284)||(15015891-15015978)
chr5 (197-238)||(31038333-31038374)
chr5 (197-238)||(31047557-31047598)
chr5 (102-135)||(34112877-34112910)
chr5 (87-136)||(35960353-35960402)
chr5 (74-146)||(465880-465952)
chr5 (186-242)||(2568696-2568751)
chr5 (189-245)||(3735131-3735187)
chr5 (69-133)||(35095868-35095931)
chr5 (186-222)||(40159855-40159891)
[»] chr6 (18 HSPs)
chr6 (8-240)||(24476461-24476694)
chr6 (70-236)||(9093538-9093704)
chr6 (92-238)||(2735013-2735159)
chr6 (63-132)||(264286-264355)
chr6 (186-245)||(848027-848086)
chr6 (65-123)||(2514620-2514677)
chr6 (79-133)||(9559626-9559680)
chr6 (85-133)||(29274314-29274362)
chr6 (86-141)||(430453-430508)
chr6 (186-245)||(31813199-31813258)
chr6 (76-123)||(32917154-32917201)
chr6 (186-240)||(9912169-9912223)
chr6 (186-232)||(34430447-34430493)
chr6 (85-146)||(507157-507218)
chr6 (85-122)||(10616803-10616840)
chr6 (99-136)||(10749310-10749347)
chr6 (186-243)||(31624128-31624184)
chr6 (70-118)||(1669887-1669935)
[»] chr3 (34 HSPs)
chr3 (69-284)||(25447180-25447393)
chr3 (78-240)||(1816512-1816674)
chr3 (63-245)||(402515-402696)
chr3 (93-245)||(20880422-20880573)
chr3 (71-130)||(30574002-30574059)
chr3 (186-245)||(21367705-21367764)
chr3 (79-133)||(2128336-2128390)
chr3 (186-240)||(26878238-26878292)
chr3 (70-211)||(40665351-40665492)
chr3 (113-245)||(30443858-30443990)
chr3 (70-122)||(34638061-34638113)
chr3 (79-123)||(35394796-35394840)
chr3 (68-119)||(23815973-23816024)
chr3 (186-229)||(35394487-35394530)
chr3 (88-175)||(36189506-36189593)
chr3 (78-133)||(44061108-44061163)
chr3 (73-123)||(2304336-2304386)
chr3 (186-284)||(24085273-24085370)
chr3 (65-123)||(41028946-41029003)
chr3 (186-240)||(46031028-46031082)
chr3 (187-245)||(46778164-46778222)
chr3 (78-123)||(905065-905110)
chr3 (85-122)||(24268251-24268288)
chr3 (69-133)||(36783419-36783484)
chr3 (187-240)||(49556897-49556950)
chr3 (88-136)||(1395611-1395659)
chr3 (93-133)||(30956711-30956751)
chr3 (93-133)||(30972523-30972563)
chr3 (70-122)||(34632154-34632206)
chr3 (93-141)||(35959533-35959581)
chr3 (85-133)||(39602294-39602342)
chr3 (156-240)||(39980737-39980821)
chr3 (89-133)||(42809242-42809286)
chr3 (71-131)||(46030911-46030971)
[»] chr2 (41 HSPs)
chr2 (72-146)||(42457872-42457946)
chr2 (65-152)||(42420360-42420447)
chr2 (93-245)||(32592532-32592683)
chr2 (69-136)||(4026738-4026805)
chr2 (79-238)||(18066059-18066218)
chr2 (70-284)||(2416235-2416448)
chr2 (186-284)||(19608568-19608665)
chr2 (186-245)||(45229549-45229608)
chr2 (186-236)||(41170552-41170601)
chr2 (187-245)||(41812065-41812123)
chr2 (85-122)||(13866826-13866863)
chr2 (186-222)||(9174853-9174889)
chr2 (69-133)||(39567824-39567888)
chr2 (74-133)||(3611152-3611211)
chr2 (186-245)||(16451156-16451215)
chr2 (183-237)||(449882-449936)
chr2 (187-241)||(750709-750763)
chr2 (186-236)||(11201363-11201413)
chr2 (72-146)||(12313245-12313318)
chr2 (186-240)||(20926541-20926594)
chr2 (72-146)||(36114595-36114669)
chr2 (186-240)||(43279507-43279561)
chr2 (186-240)||(43570452-43570505)
chr2 (69-122)||(1985488-1985541)
chr2 (85-170)||(5133709-5133794)
chr2 (204-245)||(20933787-20933828)
chr2 (79-136)||(25609727-25609784)
chr2 (90-135)||(26143724-26143769)
chr2 (189-242)||(33192243-33192295)
chr2 (78-123)||(34339053-34339098)
chr2 (86-123)||(37033982-37034019)
chr2 (63-96)||(39659640-39659673)
chr2 (69-114)||(40682477-40682522)
chr2 (70-132)||(44600461-44600525)
chr2 (78-138)||(31461368-31461428)
chr2 (189-245)||(33503048-33503103)
chr2 (186-238)||(36534806-36534858)
chr2 (189-245)||(41293136-41293192)
chr2 (208-284)||(42419853-42419928)
chr2 (70-133)||(43570338-43570399)
chr2 (86-130)||(44119722-44119766)
[»] chr8 (34 HSPs)
chr8 (79-240)||(10114421-10114581)
chr8 (93-282)||(26771210-26771398)
chr8 (186-238)||(35643968-35644020)
chr8 (186-245)||(1930073-1930132)
chr8 (69-136)||(26215417-26215484)
chr8 (87-136)||(4558737-4558786)
chr8 (68-133)||(14482123-14482187)
chr8 (65-133)||(37353334-37353401)
chr8 (79-122)||(14280497-14280540)
chr8 (105-240)||(16825516-16825650)
chr8 (186-245)||(27028869-27028928)
chr8 (70-133)||(37444500-37444563)
chr8 (74-133)||(41475145-41475204)
chr8 (186-240)||(9956792-9956846)
chr8 (186-240)||(10120794-10120848)
chr8 (192-242)||(12782161-12782211)
chr8 (186-240)||(36338200-36338254)
chr8 (187-240)||(31716205-31716258)
chr8 (81-129)||(1929984-1930032)
chr8 (186-222)||(31751553-31751589)
chr8 (190-245)||(8146371-8146426)
chr8 (70-129)||(16210975-16211034)
chr8 (186-245)||(32840959-32841018)
chr8 (186-245)||(33808341-33808400)
chr8 (186-284)||(30251389-30251486)
chr8 (79-145)||(37152963-37153029)
chr8 (73-123)||(43718025-43718075)
chr8 (89-134)||(1470940-1470985)
chr8 (69-134)||(27492880-27492945)
chr8 (79-128)||(27754334-27754383)
chr8 (69-133)||(3936770-3936834)
chr8 (187-239)||(10383924-10383975)
chr8 (95-175)||(29168935-29169015)
chr8 (63-123)||(40859813-40859873)
[»] chr1 (46 HSPs)
chr1 (70-240)||(45975612-45975782)
chr1 (70-241)||(7136976-7137149)
chr1 (186-238)||(27976642-27976694)
chr1 (79-245)||(1432446-1432612)
chr1 (93-235)||(24915034-24915176)
chr1 (85-130)||(7028229-7028274)
chr1 (78-122)||(6659633-6659677)
chr1 (63-130)||(5894251-5894318)
chr1 (186-245)||(11941300-11941359)
chr1 (186-245)||(27970267-27970326)
chr1 (186-284)||(2295134-2295231)
chr1 (63-133)||(9572193-9572263)
chr1 (72-122)||(23544736-23544786)
chr1 (85-123)||(37591369-37591407)
chr1 (186-240)||(41184628-41184682)
chr1 (85-134)||(3887716-3887765)
chr1 (98-238)||(14576634-14576773)
chr1 (70-133)||(15784257-15784321)
chr1 (68-120)||(15942253-15942305)
chr1 (88-123)||(1725206-1725241)
chr1 (186-245)||(3887605-3887664)
chr1 (111-238)||(4576768-4576894)
chr1 (186-245)||(7941644-7941703)
chr1 (189-240)||(15477606-15477657)
chr1 (186-245)||(37473441-37473500)
chr1 (186-245)||(40977376-40977435)
chr1 (186-245)||(47498812-47498871)
chr1 (186-245)||(49938785-49938844)
chr1 (186-245)||(51695468-51695527)
chr1 (111-245)||(473127-473260)
chr1 (86-136)||(26184689-26184739)
chr1 (72-134)||(27146332-27146394)
chr1 (186-240)||(27820175-27820228)
chr1 (68-166)||(33186186-33186284)
chr1 (186-284)||(36514611-36514708)
chr1 (112-238)||(37631539-37631665)
chr1 (69-123)||(38116281-38116334)
chr1 (90-152)||(38578469-38578531)
chr1 (98-136)||(44251368-44251406)
chr1 (69-122)||(870967-871019)
chr1 (100-133)||(15477530-15477563)
chr1 (68-136)||(4256124-4256192)
chr1 (85-133)||(4549803-4549851)
chr1 (186-218)||(27820337-27820369)
chr1 (79-127)||(33527238-33527286)
chr1 (78-146)||(46499926-46499994)
[»] chr4 (42 HSPs)
chr4 (188-245)||(49939924-49939981)
chr4 (74-285)||(1706548-1706758)
chr4 (186-245)||(13126549-13126608)
chr4 (60-133)||(3155515-3155588)
chr4 (69-141)||(23503480-23503552)
chr4 (68-131)||(11389446-11389509)
chr4 (186-245)||(21523596-21523654)
chr4 (186-245)||(25904196-25904255)
chr4 (93-232)||(55414406-55414545)
chr4 (79-165)||(7601690-7601776)
chr4 (186-240)||(17822843-17822897)
chr4 (71-133)||(26520314-26520376)
chr4 (186-284)||(41336798-41336895)
chr4 (69-123)||(49004065-49004119)
chr4 (186-240)||(50662716-50662770)
chr4 (68-133)||(6364069-6364134)
chr4 (91-136)||(30770826-30770871)
chr4 (86-138)||(40532952-40533004)
chr4 (187-238)||(43886112-43886162)
chr4 (186-240)||(24169301-24169355)
chr4 (93-123)||(27405996-27406026)
chr4 (85-131)||(30338679-30338725)
chr4 (186-240)||(50681067-50681121)
chr4 (186-284)||(54426081-54426178)
chr4 (85-138)||(9680601-9680654)
chr4 (70-175)||(17883990-17884095)
chr4 (78-123)||(18630610-18630655)
chr4 (183-240)||(25571295-25571351)
chr4 (186-239)||(48719371-48719423)
chr4 (78-134)||(4471101-4471157)
chr4 (187-235)||(17223020-17223067)
chr4 (87-123)||(21193937-21193973)
chr4 (87-131)||(21683566-21683610)
chr4 (86-170)||(25885797-25885881)
chr4 (85-133)||(44138496-44138544)
chr4 (186-238)||(44138597-44138649)
chr4 (86-122)||(45128406-45128442)
chr4 (157-245)||(46588046-46588134)
chr4 (157-245)||(46592182-46592270)
chr4 (78-122)||(47970248-47970292)
chr4 (69-133)||(50662817-50662881)
chr4 (98-174)||(54069461-54069537)
[»] chr7 (24 HSPs)
chr7 (105-240)||(20526403-20526538)
chr7 (186-284)||(34035955-34036052)
chr7 (189-268)||(48131594-48131672)
chr7 (189-284)||(48470085-48470179)
chr7 (78-132)||(15328536-15328590)
chr7 (190-240)||(33601388-33601438)
chr7 (71-129)||(37832228-37832286)
chr7 (188-245)||(37832114-37832171)
chr7 (186-245)||(3308224-3308284)
chr7 (79-175)||(33673009-33673104)
chr7 (186-245)||(5947222-5947281)
chr7 (187-258)||(5947280-5947350)
chr7 (186-245)||(38499886-38499945)
chr7 (186-240)||(39967958-39968012)
chr7 (98-136)||(40689068-40689106)
chr7 (79-136)||(5269461-5269518)
chr7 (78-123)||(25827322-25827367)
chr7 (190-283)||(33601963-33602055)
chr7 (99-168)||(34083575-34083644)
chr7 (69-146)||(42656436-42656513)
chr7 (71-120)||(44777080-44777129)
chr7 (214-242)||(946793-946821)
chr7 (93-133)||(45004711-45004751)
chr7 (195-266)||(48131384-48131454)
[»] scaffold0024 (1 HSPs)
scaffold0024 (70-133)||(21363-21426)
[»] scaffold0590 (1 HSPs)
scaffold0590 (78-138)||(1154-1214)
[»] scaffold0275 (1 HSPs)
scaffold0275 (78-138)||(2761-2821)
[»] scaffold0528 (1 HSPs)
scaffold0528 (197-238)||(962-1003)


Alignment Details
Target: chr5 (Bit Score: 421; Significance: 0; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 421; E-Value: 0
Query Start/End: Original strand, 8 - 504
Target Start/End: Original strand, 706323 - 706830
Alignment:
Q  8 gtgaaatggttctttgcattgctcatcggcatttgtaagttttttgaattgcagtacaaatgcttatcattataagcgcttatgtataaactatttctat 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  706323 gtgaaatggttctttgcattgctcatcggcatttgtaagttttttgaattacagtacaaatgcttatcactataagcgcttatgtataagctatttctat 706422  T
Q  108 agtaaaagataaaatacagttaaattattcttgtttaagatataatcagtttttataagttatattggtcatccgatcaaaataagctgaaaatagctta 207  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  706423 agtaaaagataaaatatagttaaattattcttgtttaagatataatcagtttttataagttatattggtgatcctatcaaaataagctgaaaatagctta 706522  T
Q  208 tgaaaaatgtcataaactattttcataagttcttccaacccagtctcataatgcttatgtccgtagataaactcaaaataagagttttaatgcagctgta 307  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  706523 tgaacaatgtcataaactattttcataagttcttccaacccagtctcataatgcttatgtccgtagataaactcaaaataagagttttaacgcagctgta 706622  T
Q  308 tgcccaagtttgagtttccacctgggaccttggttaagctagaagagacatgacatgtgtcatctcattcaatcg----ttattggttatattggttggc 403  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    ||||||| |||||||||||||    
T  706623 tgcccaagtttgagtttcaacctgggaccttggttaagctagaagagacatgacatgtgtcatctcattcaatcgttacttattgggtatattggttggc 706722  T
Q  404 ggttttgtat-------catgtatcagaattaatagtgagttcatagaatgatttaagcggctattcttacttttgattattaattgagggtatgattga 496  Q
    ||||||||||       |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  706723 ggttttgtatatatagacatgtagcagaattaatagtgagttcatagaatgatttaagcggctattcttacttttgattattaattgagggtatgattga 706822  T
Q  497 atggagga 504  Q
    ||||||||    
T  706823 atggagga 706830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 68 - 284
Target Start/End: Original strand, 39105384 - 39105600
Alignment:
Q  68 tgcttatcattataagcgcttatgtataaactatttctatagtaaaagataaaatacagttaaattattcttgtttaagatataatcagtttttataagt 167  Q
    |||||||||| |||||||||||||||||| ||||||||||||  ||| || ||||  ||||||||| || | || |||| ||||||| ||||| |||||     
T  39105384 tgcttatcatgataagcgcttatgtataagctatttctatagctaaatatgaaatgaagttaaattgttttcgtataagctataatctgttttcataagc 39105483  T
Q  168 tatattggtcatccgatcaaaataagctgaaaatagcttatgaaaaatgtcataaactattttcataagttcttccaacccagtctcataatgcttatgt 267  Q
    ||| ||||  | |  || |||||||||| ||||||||||||||| |||||||||| || ||||||||| |||| ||||   ||||||||||  |||||      
T  39105484 tatcttggagaacttatgaaaataagctaaaaatagcttatgaacaatgtcataagctgttttcataaattctcccaaaaaagtctcataaaacttatac 39105583  T
Q  268 ccgtagataaactcaaa 284  Q
    || ||||||||||||||    
T  39105584 ccctagataaactcaaa 39105600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 60 - 133
Target Start/End: Original strand, 12425483 - 12425556
Alignment:
Q  60 agtacaaatgcttatcattataagcgcttatgtataaactatttctatagtaaaagataaaatacagttaaatt 133  Q
    ||||||| || ||||||| |||| |||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  12425483 agtacaagtgtttatcatgataaacgcttatgtataaactatttatatagtaaaagataaaataaagttaaatt 12425556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 71 - 133
Target Start/End: Complemental strand, 5963429 - 5963367
Alignment:
Q  71 ttatcattataagcgcttatgtataaactatttctatagtaaaagataaaatacagttaaatt 133  Q
    ||||||| ||||||||||||||| |||||||||||||| | |||||||||||| |||||||||    
T  5963429 ttatcatgataagcgcttatgtacaaactatttctataatgaaagataaaataaagttaaatt 5963367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 71 - 175
Target Start/End: Original strand, 42582835 - 42582939
Alignment:
Q  71 ttatcattataagcgcttatgtataaactatttctatagtaaaagataaaatacagttaaattattcttgtttaagatataatcagtttttataagttat 170  Q
    ||||||| |||||||||||||||||| ||||||| ||  |||||||| ||||| ||||||||| |  | ||||||| ||||| | |||||| |||| |||    
T  42582835 ttatcataataagcgcttatgtataagctatttccatgataaaagatgaaataaagttaaattgtgttcgtttaaggtataagctgtttttgtaagctat 42582934  T
Q  171 attgg 175  Q
    |||||    
T  42582935 attgg 42582939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 83 - 138
Target Start/End: Original strand, 6593235 - 6593290
Alignment:
Q  83 gcgcttatgtataaactatttctatagtaaaagataaaatacagttaaattattct 138  Q
    |||||||||||||||| |||||||||  ||||||||||||| ||||||||||||||    
T  6593235 gcgcttatgtataaacaatttctataacaaaagataaaataaagttaaattattct 6593290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 71 - 222
Target Start/End: Complemental strand, 9202895 - 9202744
Alignment:
Q  71 ttatcattataagcgcttatgtataaactatttctatagtaaaagataaaatacagttaaattattcttgtttaagatataatcagtttttataagttat 170  Q
    ||||||| ||||| |||||| ||||| |||||||| ||| ||||||||||||| ||||||||| || |  | ||||  |||| | ||||| |||||||||    
T  9202895 ttatcatgataagtgcttatatataagctatttctgtagcaaaagataaaataaagttaaattgttttcatataagcaataagctgttttcataagttat 9202796  T
Q  171 attggtcatccgatcaaaataagctgaaaatagcttatgaaaaatgtcataa 222  Q
     |||   | |  || ||||||||||| ||| |||||||||| ||||||||||    
T  9202795 cttgaagaacttatgaaaataagctggaaacagcttatgaacaatgtcataa 9202744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 186 - 245
Target Start/End: Complemental strand, 16937915 - 16937856
Alignment:
Q  186 aaaataagctgaaaatagcttatgaaaaatgtcataaactattttcataagttcttccaa 245  Q
    ||||||||||||||| |||||||||||  |||||||| || |||||||||||||||||||    
T  16937915 aaaataagctgaaaaaagcttatgaaatttgtcataagctgttttcataagttcttccaa 16937856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 68 - 167
Target Start/End: Complemental strand, 42569130 - 42569031
Alignment:
Q  68 tgcttatcattataagcgcttatgtataaactatttctatagtaaaagataaaatacagttaaattattcttgtttaagatataatcagtttttataagt 167  Q
    |||||||||| ||||||||||||| | || |||||||||||| ||||||||||||| |||  |||| || | || |||| ||||||| ||||| ||||||    
T  42569130 tgcttatcatgataagcgcttatgaaaaagctatttctatagcaaaagataaaataaagtctaattgttttcgtataagctataatctgttttgataagt 42569031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 186 - 284
Target Start/End: Original strand, 10639991 - 10640088
Alignment:
Q  186 aaaataagctgaaaatagcttatgaaaaatgtcataaactattttcataagttcttccaacccagtctcataatgcttatgtccgtagataaactcaaa 284  Q
    ||||||||||  ||| ||||||||||||||||||||| || |||||||||||||| ||||  || | ||| ||  |||||||| |||||||||||||||    
T  10639991 aaaataagctagaaaaagcttatgaaaaatgtcataagctgttttcataagttctcccaa-acaatatcacaaaacttatgtcagtagataaactcaaa 10640088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 63 - 133
Target Start/End: Complemental strand, 19460541 - 19460471
Alignment:
Q  63 acaaatgcttatcattataagcgcttatgtataaactatttctatagtaaaagataaaatacagttaaatt 133  Q
    ||||||||||||||| |||||| |||||||||||||||||||||||  |||| ||  |||| |||||||||    
T  19460541 acaaatgcttatcatgataagcacttatgtataaactatttctatatcaaaacattgaataaagttaaatt 19460471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 68 - 132
Target Start/End: Complemental strand, 1465169 - 1465105
Alignment:
Q  68 tgcttatcattataagcgcttatgtataaactatttctatagtaaaagataaaatacagttaaat 132  Q
    |||||||||  |||||||||||||||||| |||||||||||| | | ||||||||| ||||||||    
T  1465169 tgcttatcaagataagcgcttatgtataagctatttctatagcataggataaaataaagttaaat 1465105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 73 - 129
Target Start/End: Complemental strand, 4014569 - 4014513
Alignment:
Q  73 atcattataagcgcttatgtataaactatttctatagtaaaagataaaatacagtta 129  Q
    ||||| |||||||| ||||||||| |||||||||||| ||||||||||||| |||||    
T  4014569 atcatgataagcgcctatgtataagctatttctatagcaaaagataaaataaagtta 4014513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 70 - 240
Target Start/End: Original strand, 8334500 - 8334663
Alignment:
Q  70 cttatcattataagcgcttatgtataaactatttctatagtaaaagataaaatacagttaaattattcttgtttaagatataatcagtttttataagtta 169  Q
    |||||||| ||| |||||||| ||||||||||||| |||  ||| ||||||||| | |||||||||| | || ||||||       ||||| |||||| |    
T  8334500 cttatcatgatacgcgcttatctataaactatttcaataaaaaatgataaaataaatttaaattattttcgtataagat-------gttttgataagtaa 8334592  T
Q  170 tattggtcatccgatcaaaataagctgaaaatagcttatgaaaaatgtcataaactattttcataagttct 240  Q
    | |||   | |  || ||||||||||||||| |  |||||||| ||||||||| |||||||||||||||||    
T  8334593 tcttgaaaaacttatgaaaataagctgaaaacaatttatgaaatatgtcataagctattttcataagttct 8334663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 186 - 245
Target Start/End: Original strand, 7808543 - 7808602
Alignment:
Q  186 aaaataagctgaaaatagcttatgaaaaatgtcataaactattttcataagttcttccaa 245  Q
    ||||||||||||||| |||||||||| ||||| |||| ||||||||||||| ||| ||||    
T  7808543 aaaataagctgaaaacagcttatgaacaatgttataagctattttcataagctctcccaa 7808602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 186 - 245
Target Start/End: Complemental strand, 16458011 - 16457952
Alignment:
Q  186 aaaataagctgaaaatagcttatgaaaaatgtcataaactattttcataagttcttccaa 245  Q
    ||||||| ||||||| |||||||||||| |||||||| || |||||||||||||| ||||    
T  16458011 aaaataaactgaaaagagcttatgaaaactgtcataagctgttttcataagttctcccaa 16457952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 79 - 130
Target Start/End: Original strand, 34112806 - 34112857
Alignment:
Q  79 ataagcgcttatgtataaactatttctatagtaaaagataaaatacagttaa 130  Q
    |||||||||||||||||| |||||||||||||||||||| || || ||||||    
T  34112806 ataagcgcttatgtataagctatttctatagtaaaagattaattaaagttaa 34112857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 187 - 242
Target Start/End: Original strand, 42646706 - 42646761
Alignment:
Q  187 aaataagctgaaaatagcttatgaaaaatgtcataaactattttcataagttcttc 242  Q
    |||||| || |||| ||||||||||||||||| |||||| ||||||||||||||||    
T  42646706 aaataaactaaaaaaagcttatgaaaaatgtcctaaacttttttcataagttcttc 42646761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 35446093 - 35446147
Alignment:
Q  186 aaaataagctgaaaatagcttatgaaaaatgtcataaactattttcataagttct 240  Q
    ||||||||||||||| |||||| ||||||||||||||||| |||||  |||||||    
T  35446093 aaaataagctgaaaaaagcttacgaaaaatgtcataaactgttttcgaaagttct 35446147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 79 - 129
Target Start/End: Original strand, 40590458 - 40590508
Alignment:
Q  79 ataagcgcttatgtataaactatttctatagtaaaagataaaatacagtta 129  Q
    |||||||||||||||||| ||| |||||||| ||||||||||||| |||||    
T  40590458 ataagcgcttatgtataagctacttctatagaaaaagataaaataaagtta 40590508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 89 - 170
Target Start/End: Original strand, 14932231 - 14932311
Alignment:
Q  89 atgtataaactatttctatagtaaaagataaaatacagttaaattattcttgtttaagatataatcagtttttataagttat 170  Q
    |||||||| |||||| ||||| ||||||||||||| ||||||||| || |||| |||| ||||| | ||| |||||||||||    
T  14932231 atgtataatctatttttatagcaaaagataaaataaagttaaattgtt-ttgtataagctataagctgttgttataagttat 14932311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 123
Target Start/End: Original strand, 11054117 - 11054161
Alignment:
Q  79 ataagcgcttatgtataaactatttctatagtaaaagataaaata 123  Q
    |||| ||||||||||||| ||||||||||| ||||||||||||||    
T  11054117 ataaacgcttatgtataagctatttctataataaaagataaaata 11054161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 69 - 133
Target Start/End: Original strand, 11835198 - 11835262
Alignment:
Q  69 gcttatcattataagcgcttatgtataaactatttctatagtaaaagataaaatacagttaaatt 133  Q
    ||||||||| ||||| | |||||||||||| |||| ||||  ||||||||||||| |||||||||    
T  11835198 gcttatcatgataagtgtttatgtataaaccatttttataacaaaagataaaataaagttaaatt 11835262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 81 - 133
Target Start/End: Complemental strand, 37112395 - 37112343
Alignment:
Q  81 aagcgcttatgtataaactatttctatagtaaaagataaaatacagttaaatt 133  Q
    |||||||||||||||| ||||||||| || ||||||||||| | |||||||||    
T  37112395 aagcgcttatgtataagctatttctacagcaaaagataaaacaaagttaaatt 37112343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 69 - 117
Target Start/End: Complemental strand, 42573928 - 42573880
Alignment:
Q  69 gcttatcattataagcgcttatgtataaactatttctatagtaaaagat 117  Q
    ||||||||| |||||||||||||||||| |||||||||||  |||||||    
T  42573928 gcttatcatgataagcgcttatgtataagctatttctataacaaaagat 42573880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 186 - 245
Target Start/End: Complemental strand, 17258915 - 17258857
Alignment:
Q  186 aaaataagctgaaaatagcttatgaaaaatgtcataaactattttcataagttcttccaa 245  Q
    ||||||||||||||| |||||||| || ||||||||| ||||||||||| ||||| ||||    
T  17258915 aaaataagctgaaaacagcttatg-aacatgtcataagctattttcataggttctcccaa 17258857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 186 - 245
Target Start/End: Complemental strand, 32859751 - 32859693
Alignment:
Q  186 aaaataagctgaaaatagcttatgaaaaatgtcataaactattttcataagttcttccaa 245  Q
    ||||||||||||||| ||||||||||||||||| |||  | ||||||||| |||||||||    
T  32859751 aaaataagctgaaaa-agcttatgaaaaatgtcgtaagttgttttcataaattcttccaa 32859693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 186 - 245
Target Start/End: Complemental strand, 32861923 - 32861865
Alignment:
Q  186 aaaataagctgaaaatagcttatgaaaaatgtcataaactattttcataagttcttccaa 245  Q
    ||||||||||||||| ||||||||||||||||| |||  | ||||||||| |||||||||    
T  32861923 aaaataagctgaaaa-agcttatgaaaaatgtcgtaagttgttttcataaattcttccaa 32861865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 85 - 136
Target Start/End: Complemental strand, 37063207 - 37063156
Alignment:
Q  85 gcttatgtataaactatttctatagtaaaagataaaatacagttaaattatt 136  Q
    ||||||||||||||||||||||||  ||||||||||||| ||| ||| ||||    
T  37063207 gcttatgtataaactatttctataacaaaagataaaataaagtcaaactatt 37063156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 85 - 152
Target Start/End: Original strand, 40452228 - 40452295
Alignment:
Q  85 gcttatgtataaactatttctatagtaaaagataaaatacagttaaattattcttgtttaagatataa 152  Q
    ||||||||||||  ||||||||||| |||  |||||||| |||||||||||| | ||||||| |||||    
T  40452228 gcttatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataa 40452295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 70 - 152
Target Start/End: Complemental strand, 3566466 - 3566384
Alignment:
Q  70 cttatcattataagcgcttatgtataaactatttctatagtaaaagataaaatacagttaaattattcttgtttaagatataa 152  Q
    |||||||| |||||| ||||  ||||| |||||||||||   ||||| |||||| |||||||||||| |||| |||| |||||    
T  3566466 cttatcatgataagcacttacctataagctatttctatacccaaagagaaaataaagttaaattatttttgtataagctataa 3566384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 71 - 133
Target Start/End: Original strand, 7674571 - 7674633
Alignment:
Q  71 ttatcattataagcgcttatgtataaactatttctatagtaaaagataaaatacagttaaatt 133  Q
    ||||||| |||||| ||||| ||||| |||||||||||  ||||||||||||| | |||||||    
T  7674571 ttatcatgataagcacttatatataagctatttctataccaaaagataaaataaatttaaatt 7674633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 12857370 - 12857316
Alignment:
Q  186 aaaataagctgaaaatagcttatgaaaaatgtcataaactattttcataagttct 240  Q
    ||||||||||||||| ||||| |||||| ||||||||  | ||||||||||||||    
T  12857370 aaaataagctgaaaaaagcttgtgaaaattgtcataagttgttttcataagttct 12857316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 70 - 128
Target Start/End: Original strand, 28776897 - 28776955
Alignment:
Q  70 cttatcattataagcgcttatgtataaactatttctatagtaaaagataaaatacagtt 128  Q
    |||||||| ||||| |||||||||||| |||||| ||| | ||||||||||||| ||||    
T  28776897 cttatcatgataagtgcttatgtataagctatttttattgaaaaagataaaataaagtt 28776955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 28777031 - 28777085
Alignment:
Q  186 aaaataagctgaaaatagcttatgaaaaatgtcataaactattttcataagttct 240  Q
    |||||||| | ||||||| || |||| |||||||||||||||||| |||||||||    
T  28777031 aaaataagataaaaatagtttttgaacaatgtcataaactatttttataagttct 28777085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 186 - 236
Target Start/End: Original strand, 40426803 - 40426853
Alignment:
Q  186 aaaataagctgaaaatagcttatgaaaaatgtcataaactattttcataag 236  Q
    |||||||||| |||| ||||||||||||||| ||||| || ||||||||||    
T  40426803 aaaataagcttaaaaaagcttatgaaaaatggcataagctgttttcataag 40426853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 60 - 122
Target Start/End: Original strand, 40848669 - 40848731
Alignment:
Q  60 agtacaaatgcttatcattataagcgcttatgtataaactatttctatagtaaaagataaaat 122  Q
    ||||||| ||||| | || |||||| ||||||||||||||||||||| || ||||||| ||||    
T  40848669 agtacaagtgcttttaatgataagcacttatgtataaactatttctagagcaaaagatgaaat 40848731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 42582720 - 42582666
Alignment:
Q  186 aaaataagctgaaaatagcttatgaaaaatgtcataaactattttcataagttct 240  Q
    ||||||||||||| | ||||||  || ||||||||||||||||||| ||||||||    
T  42582720 aaaataagctgaatacagcttactaacaatgtcataaactattttcttaagttct 42582666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 122
Target Start/End: Original strand, 5559647 - 5559704
Alignment:
Q  65 aaatgcttatcattataagcgcttatgtataaactatttctatagtaaaagataaaat 122  Q
    ||||| ||||||| |||||||||| ||||| |  ||||||||||||||||||| ||||    
T  5559647 aaatgtttatcatgataagcgcttgtgtatgagttatttctatagtaaaagattaaat 5559704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 92 - 133
Target Start/End: Original strand, 7853602 - 7853643
Alignment:
Q  92 tataaactatttctatagtaaaagataaaatacagttaaatt 133  Q
    |||||||||||||||||  ||||||||||||| |||||||||    
T  7853602 tataaactatttctataacaaaagataaaataaagttaaatt 7853643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 284
Target Start/End: Original strand, 15015891 - 15015978
Alignment:
Q  195 tgaaaatagcttatgaaaaatgtcataaactattttcataagttcttccaacccagtctcataatgcttatgtccgtagataaactcaaa 284  Q
    |||||| | |||||||||| |||| | || |||||||||||||||| ||||  |||||||| || ||||||||| |||||||| ||||||    
T  15015891 tgaaaaaatcttatgaaaattgtcttcaa-tattttcataagttctcccaa-acagtctcacaaagcttatgtcagtagataagctcaaa 15015978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 197 - 238
Target Start/End: Original strand, 31038333 - 31038374
Alignment:
Q  197 aaaatagcttatgaaaaatgtcataaactattttcataagtt 238  Q
    |||| ||||||||||||||||||||| ||||||| |||||||    
T  31038333 aaaaaagcttatgaaaaatgtcataagctatttttataagtt 31038374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 197 - 238
Target Start/End: Original strand, 31047557 - 31047598
Alignment:
Q  197 aaaatagcttatgaaaaatgtcataaactattttcataagtt 238  Q
    |||| ||||||||||||||||||||| ||||||| |||||||    
T  31047557 aaaaaagcttatgaaaaatgtcataagctatttttataagtt 31047598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 102 - 135
Target Start/End: Original strand, 34112877 - 34112910
Alignment:
Q  102 ttctatagtaaaagataaaatacagttaaattat 135  Q
    |||||||||||||||||||||| |||||||||||    
T  34112877 ttctatagtaaaagataaaataaagttaaattat 34112910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 136
Target Start/End: Original strand, 35960353 - 35960402
Alignment:
Q  87 ttatgtataaactatttctatagtaaaagataaaatacagttaaattatt 136  Q
    ||||| |||||||||||||||| |||||||||||||| ||| ||| ||||    
T  35960353 ttatgcataaactatttctataataaaagataaaataaagtcaaactatt 35960402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 74 - 146
Target Start/End: Original strand, 465880 - 465952
Alignment:
Q  74 tcattataagcgcttatgtataaactatttctatagtaaaagataaaatacagttaaattattcttgtttaag 146  Q
    |||| |||||| ||||| ||||| ||||||||||   ||||||||||||| ||||||||| || |||| ||||    
T  465880 tcatgataagcacttatatataagctatttctatgacaaaagataaaataaagttaaattgtttttgtataag 465952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 186 - 242
Target Start/End: Original strand, 2568696 - 2568751
Alignment:
Q  186 aaaataagctgaaaatagcttatgaaaaatgtcataaactattttcataagttcttc 242  Q
    |||||||||| |||||| |||||||| | |||||||| || ||||||||||||||||    
T  2568696 aaaataagctaaaaataacttatgaata-tgtcataagctgttttcataagttcttc 2568751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 189 - 245
Target Start/End: Complemental strand, 3735187 - 3735131
Alignment:
Q  189 ataagctgaaaatagcttatgaaaaatgtcataaactattttcataagttcttccaa 245  Q
    |||||||||||| ||||| |||||| |||||||| || ||||||| |||||| ||||    
T  3735187 ataagctgaaaaaagcttttgaaaattgtcataagctgttttcatcagttctaccaa 3735131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 69 - 133
Target Start/End: Complemental strand, 35095931 - 35095868
Alignment:
Q  69 gcttatcattataagcgcttatgtataaactatttctatagtaaaagataaaatacagttaaatt 133  Q
    ||||||||| ||||| |||||| | |||||||||||||||  ||||||||||||| ||| |||||    
T  35095931 gcttatcat-ataagtgcttatatttaaactatttctataacaaaagataaaataaagtcaaatt 35095868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 186 - 222
Target Start/End: Original strand, 40159855 - 40159891
Alignment:
Q  186 aaaataagctgaaaatagcttatgaaaaatgtcataa 222  Q
    |||||||||| |||||||||||||||| |||||||||    
T  40159855 aaaataagctaaaaatagcttatgaaacatgtcataa 40159891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 72; Significance: 2e-32; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 8 - 240
Target Start/End: Original strand, 24476461 - 24476694
Alignment:
Q  8 gtgaaatggttctttgcattgctcatcggcatttgtaagttttttgaattgcagtacaaatgcttatc--attataagcgcttatgtataaactatttct 105  Q
    ||||||||||||||||  |||||||| ||||||||||||||||| |||||  | |||||   |||||   || |||| | ||||||||||| ||||||||    
T  24476461 gtgaaatggttctttgtgttgctcattggcatttgtaagttttt-gaattatattacaatcacttatatgatgataaacacttatgtataagctatttct 24476559  T
Q  106 atagtaaaagataaaatacagttaaattattcttgtttaagatataatcagtttttataagttatattggtcatccgatcaaaataagctgaaaatagct 205  Q
    |||| ||||||||||||  |||||||||||| |  | ||||  |||| ||||||| ||||| ||| ||||  | | |||  ||||||| |||||||||||    
T  24476560 atagcaaaagataaaatgtagttaaattattttcatataagcgataagcagttttgataagctattttggagaacggattgaaataagttgaaaatagct 24476659  T
Q  206 tatgaaaaatgtcataaactattttcataagttct 240  Q
    |||||| ||||| ||||||||||||||||||||||    
T  24476660 tatgaacaatgtaataaactattttcataagttct 24476694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 70 - 236
Target Start/End: Complemental strand, 9093704 - 9093538
Alignment:
Q  70 cttatcattataagcgcttatgtataaactatttctatagtaaaagataaaatacagttaaattattcttgtttaagatataatcagtttttataagtta 169  Q
    |||||||| ||||||||||||| |||| |||||||||||  ||||||||||||| ||||||||| || | || |||| ||||| | ||||| ||||| |     
T  9093704 cttatcatgataagcgcttatggataagctatttctatatcaaaagataaaataaagttaaattgttttcgtataagctataagctgttttcataagctg 9093605  T
Q  170 tattggtcatccgatcaaaataagctgaaaatagcttatgaaaaatgtcataaactattttcataag 236  Q
    | || |  | |  |  ||||||||||||||| || |||| || |||||||||| |||||||||||||    
T  9093604 tcttagagaacttaagaaaataagctgaaaacaggttattaacaatgtcataagctattttcataag 9093538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 92 - 238
Target Start/End: Original strand, 2735013 - 2735159
Alignment:
Q  92 tataaactatttctatagtaaaagataaaatacagttaaattattcttgtttaagatataatcagtttttataagttatattggtcatccgatcaaaata 191  Q
    ||||| |||| ||||||  ||||||||||||| |||||||||||| |||| |||  ||||| | ||||| |||||  || |||  || |  || ||||||    
T  2735013 tataagctatgtctataacaaaagataaaataaagttaaattatttttgtataatctataagctgttttcataagcaatcttgaacaacttatgaaaata 2735112  T
Q  192 agctgaaaatagcttatgaaaaatgtcataaactattttcataagtt 238  Q
    ||| ||||| ||||||||||||||||||||| |  ||||||||||||    
T  2735113 agccgaaaacagcttatgaaaaatgtcataagccgttttcataagtt 2735159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 63 - 132
Target Start/End: Original strand, 264286 - 264355
Alignment:
Q  63 acaaatgcttatcattataagcgcttatgtataaactatttctatagtaaaagataaaatacagttaaat 132  Q
    |||| |||||||||| ||||| |||||| ||||| ||||||||| || ||||||||||||| ||||||||    
T  264286 acaagtgcttatcatgataagtgcttatatataagctatttctaaagcaaaagataaaataaagttaaat 264355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 186 - 245
Target Start/End: Original strand, 848027 - 848086
Alignment:
Q  186 aaaataagctgaaaatagcttatgaaaaatgtcataaactattttcataagttcttccaa 245  Q
    ||||||||||||||| |||||| |||||||||||||| |  |||| ||||||||||||||    
T  848027 aaaataagctgaaaaaagcttaagaaaaatgtcataagcagtttttataagttcttccaa 848086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 2514620 - 2514677
Alignment:
Q  65 aaatgcttatcattataagcgcttatgtataaactatttctatagtaaaagataaaata 123  Q
    |||||||||||||  |||| |||||||||||| ||||||||||| ||||||||||||||    
T  2514620 aaatgcttatcatg-taagtgcttatgtataagctatttctataataaaagataaaata 2514677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 79 - 133
Target Start/End: Complemental strand, 9559680 - 9559626
Alignment:
Q  79 ataagcgcttatgtataaactatttctatagtaaaagataaaatacagttaaatt 133  Q
    ||||||||||||||||||  ||||||||||| ||||||||||||| | |||||||    
T  9559680 ataagcgcttatgtataagttatttctatagcaaaagataaaataaatttaaatt 9559626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 85 - 133
Target Start/End: Complemental strand, 29274362 - 29274314
Alignment:
Q  85 gcttatgtataaactatttctatagtaaaagataaaatacagttaaatt 133  Q
    |||||||||||| |||||||||||| ||||||||||||| ||| |||||    
T  29274362 gcttatgtataagctatttctatagcaaaagataaaataaagtcaaatt 29274314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 141
Target Start/End: Complemental strand, 430508 - 430453
Alignment:
Q  86 cttatgtataaactatttctatagtaaaagataaaatacagttaaattattcttgt 141  Q
    ||||||||||| |||||||||||  ||||||| ||||| |||||||||||| ||||    
T  430508 cttatgtataagctatttctatataaaaagatgaaataaagttaaattatttttgt 430453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 186 - 245
Target Start/End: Original strand, 31813199 - 31813258
Alignment:
Q  186 aaaataagctgaaaatagcttatgaaaaatgtcataaactattttcataagttcttccaa 245  Q
    |||||||||||||||  ||||||||| ||| |||||| | ||||||||||||||| ||||    
T  31813199 aaaataagctgaaaacggcttatgaacaatctcataagcaattttcataagttctcccaa 31813258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 76 - 123
Target Start/End: Original strand, 32917154 - 32917201
Alignment:
Q  76 attataagcgcttatgtataaactatttctatagtaaaagataaaata 123  Q
    |||||||| |||||||||||| ||||||| |||| |||||||||||||    
T  32917154 attataagtgcttatgtataagctatttcaatagcaaaagataaaata 32917201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 9912223 - 9912169
Alignment:
Q  186 aaaataagctgaaaatagcttatgaaaaatgtcataaactattttcataagttct 240  Q
    |||||||||| |||| |||||||||| |||||||||| ||  |||||||||||||    
T  9912223 aaaataagctcaaaacagcttatgaacaatgtcataagctggtttcataagttct 9912169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 186 - 232
Target Start/End: Complemental strand, 34430493 - 34430447
Alignment:
Q  186 aaaataagctgaaaatagcttatgaaaaatgtcataaactattttca 232  Q
    ||||||||||||||| ||||||||| ||||||||||| || ||||||    
T  34430493 aaaataagctgaaaaaagcttatgataaatgtcataagctgttttca 34430447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 146
Target Start/End: Original strand, 507157 - 507218
Alignment:
Q  85 gcttatgtataaactatttctatagtaaaagataaaatacagttaaattattcttgtttaag 146  Q
    ||||||||||||| ||||||||||  ||||||||||||| ||||| ||| || |||| ||||    
T  507157 gcttatgtataaattatttctataacaaaagataaaataaagttagattgtttttgtataag 507218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 122
Target Start/End: Complemental strand, 10616840 - 10616803
Alignment:
Q  85 gcttatgtataaactatttctatagtaaaagataaaat 122  Q
    |||||||||||| |||||| ||||||||||||||||||    
T  10616840 gcttatgtataatctatttttatagtaaaagataaaat 10616803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 99 - 136
Target Start/End: Complemental strand, 10749347 - 10749310
Alignment:
Q  99 tatttctatagtaaaagataaaatacagttaaattatt 136  Q
    |||||||||| |||||||||||||| ||||||||||||    
T  10749347 tatttctataataaaagataaaataaagttaaattatt 10749310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 186 - 243
Target Start/End: Original strand, 31624128 - 31624184
Alignment:
Q  186 aaaataagctgaaaatagcttatgaaaaatgtcataaactattttcataagttcttcc 243  Q
    |||||||| |||||| |||||||||| | |||||||| || |||||||||||||||||    
T  31624128 aaaataagttgaaaacagcttatgaaca-tgtcataagctgttttcataagttcttcc 31624184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 70 - 118
Target Start/End: Complemental strand, 1669935 - 1669887
Alignment:
Q  70 cttatcattataagcgcttatgtataaactatttctatagtaaaagata 118  Q
    |||||||||||||| |||||||||||| ||||||| ||  |||||||||    
T  1669935 cttatcattataagtgcttatgtataagctatttcaattataaaagata 1669887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 3e-18; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 69 - 284
Target Start/End: Complemental strand, 25447393 - 25447180
Alignment:
Q  69 gcttatcattataagcgcttatgtataaactatttctatagtaaaagataaaatacagttaaattattcttgtttaagatataatcagtttttataagtt 168  Q
    ||||||||| | |||| ||| ||| |||||||||||||||||||||||||||||| | ||||||| || |||| |||| ||||| | ||||| ||||| |    
T  25447393 gcttatcatgagaagcacttttgtgtaaactatttctatagtaaaagataaaataaacttaaattgtttttgtataagctataaactgttttcataagct 25447294  T
Q  169 atattggtcatccgatcaaaataagctgaaaatagcttatgaaaaatgtcataaactattttcataagttcttccaacccagtctcataatgcttatgtc 268  Q
    || ||| |  ||  || | || |||||||||| ||||| |||| |||| ||||||||  || | || |||||| |||  |||||||| ||  ||||||||    
T  25447293 atcttgat-ttcttatgagaaaaagctgaaaacagcttgtgaacaatggcataaactgcttccgtatgttcttgcaa-acagtctcacaaaacttatgtc 25447196  T
Q  269 cgtagataaactcaaa 284  Q
     |||||||||||||||    
T  25447195 agtagataaactcaaa 25447180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 78 - 240
Target Start/End: Original strand, 1816512 - 1816674
Alignment:
Q  78 tataagcgcttatgtataaactatttct-atagtaaaagataaaatacagttaaattattcttgtttaagatataatcagtttttataagttatattggt 176  Q
    |||||| ||| ||||||||||||||| | ||| |||||||||||||| ||| ||| | || |||| ||||||||||   ||||| ||||| |||| |||     
T  1816512 tataagagctaatgtataaactattttttataataaaagataaaataaagtcaaactgtttttgtataagatataagttgttttcataagctatactgga 1816611  T
Q  177 catccgatcaaaataagctgaaaatagcttatgaaaaatgtcataaactattttcataagttct 240  Q
     | |  |||||||||||||||||| ||| |||| ||||||||||||  |||||||||| |||||    
T  1816612 gagcttatcaaaataagctgaaaacagcctatg-aaaatgtcataagttattttcatatgttct 1816674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 63 - 245
Target Start/End: Complemental strand, 402696 - 402515
Alignment:
Q  63 acaaatgcttatcattataagcgcttatgtataaactatttctatagtaaaagataaaatacagttaaattattcttgtttaagatataatcagttttta 162  Q
    |||| |||||||||| ||||| |||||||||||| |||||||||||| ||||||| || || | ||||||| || | || |||| ||||| | |||||||    
T  402696 acaagtgcttatcatgataagggcttatgtataagctatttctatagaaaaagat-aattaaatttaaattgttttcgtataagttataagctgttttta 402598  T
Q  163 taagttatattggtcatccgatcaaaataagctgaaaatagcttatgaaaaatgtcataaactattttcataagttcttccaa 245  Q
    |||  ||| |||   | |   | ||| ||||||||||| |||||||||| |||||||||| || |||||||| ||||| ||||    
T  402597 taatctatcttgaagaacttgtgaaattaagctgaaaacagcttatgaacaatgtcataagctgttttcatacgttctcccaa 402515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 93 - 245
Target Start/End: Original strand, 20880422 - 20880573
Alignment:
Q  93 ataaactatttctatagtaaaagataaaatacagttaaattattcttgtttaagatataatcagtttttataagttatattggtcatccgatcaaaataa 192  Q
    |||| |||||| ||||| ||| ||||||| | ||||||||| || |||| || | ||||| | ||||||| ||| ||||||||  | |  || |||||||    
T  20880422 ataagctatttttatagcaaatgataaaaca-agttaaattgtttttgtatatgctataaactgtttttaaaagctatattggagaacttatgaaaataa 20880520  T
Q  193 gctgaaaatagcttatgaaaaatgtcataaactattttcataagttcttccaa 245  Q
    ||| |||| |||||||||||| |||||||| || |||||||| ||||| ||||    
T  20880521 gctcaaaaaagcttatgaaaattgtcataagctgttttcataggttctcccaa 20880573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 71 - 130
Target Start/End: Complemental strand, 30574059 - 30574002
Alignment:
Q  71 ttatcattataagcgcttatgtataaactatttctatagtaaaagataaaatacagttaa 130  Q
    ||||||| |||||||||||||||||| |||||||||||  ||||||||||||| ||||||    
T  30574059 ttatcatgataagcgcttatgtataagctatttctata--aaaagataaaataaagttaa 30574002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 186 - 245
Target Start/End: Original strand, 21367705 - 21367764
Alignment:
Q  186 aaaataagctgaaaatagcttatgaaaaatgtcataaactattttcataagttcttccaa 245  Q
    ||||||||||||||| ||||| |||| |||||||||| || |||||||||||||| ||||    
T  21367705 aaaataagctgaaaacagcttgtgaacaatgtcataagctgttttcataagttctcccaa 21367764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 79 - 133
Target Start/End: Complemental strand, 2128390 - 2128336
Alignment:
Q  79 ataagcgcttatgtataaactatttctatagtaaaagataaaatacagttaaatt 133  Q
    ||||||| |||||||||| |||||||||||  ||||||||||||| |||||||||    
T  2128390 ataagcgtttatgtataagctatttctataacaaaagataaaataaagttaaatt 2128336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 26878238 - 26878292
Alignment:
Q  186 aaaataagctgaaaatagcttatgaaaaatgtcataaactattttcataagttct 240  Q
    ||||||||||||||| || ||||||| |||||||||| ||||||||| |||||||    
T  26878238 aaaataagctgaaaacagtttatgaacaatgtcataagctattttcacaagttct 26878292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 70 - 211
Target Start/End: Original strand, 40665351 - 40665492
Alignment:
Q  70 cttatcattataagcgcttatgtataaactatttctatagtaaaagataaaatacagttaaattattcttgtttaagatataatcagtttttataagtta 169  Q
    |||||||| |||||| ||| |||| || |||||| |||| || |||||||| || | | |||||||| |||| |||| |||||   ||||| ||||||||    
T  40665351 cttatcatgataagcacttctgtacaagctatttttataatagaagataaactaaaataaaattatttttgtgtaagttataagatgttttcataagtta 40665450  T
Q  170 tattggtcatccgatcaaaataagctgaaaatagcttatgaa 211  Q
    | ||||  | |  || ||||||||||||||| ||||||||||    
T  40665451 tcttggagagcttataaaaataagctgaaaacagcttatgaa 40665492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 245
Target Start/End: Original strand, 30443858 - 30443990
Alignment:
Q  113 aagataaaatacagttaaattattcttgtttaagatataatcagtttttataagttatattggtcatccgatcaaaataagctgaaaatagcttatgaaa 212  Q
    ||||||||||  |||||||||  | |||| || | ||||| | ||||||||||  ||||||||  | |  || ||||||||||||||| ||||| |||||    
T  30443858 aagataaaatgaagttaaattgcttttgtatatgctataagctgtttttataaactatattggagaacttatgaaaataagctgaaaaaagcttgtgaaa 30443957  T
Q  213 aatgtcataaactattttcataagttcttccaa 245  Q
    | |||||||| || |||||||||| ||| ||||    
T  30443958 attgtcataagctgttttcataagctctaccaa 30443990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 70 - 122
Target Start/End: Complemental strand, 34638113 - 34638061
Alignment:
Q  70 cttatcattataagcgcttatgtataaactatttctatagtaaaagataaaat 122  Q
    |||||||| |||| ||||||| ||||| |||||||||||| ||||||||||||    
T  34638113 cttatcatgataaccgcttatatataagctatttctatagaaaaagataaaat 34638061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 123
Target Start/End: Complemental strand, 35394840 - 35394796
Alignment:
Q  79 ataagcgcttatgtataaactatttctatagtaaaagataaaata 123  Q
    |||| ||||||||||||| ||||||||||| ||||||||||||||    
T  35394840 ataaacgcttatgtataatctatttctataataaaagataaaata 35394796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 68 - 119
Target Start/End: Original strand, 23815973 - 23816024
Alignment:
Q  68 tgcttatcattataagcgcttatgtataaactatttctatagtaaaagataa 119  Q
    |||||||||| |||||| |||||||||||  |||||||||| ||||||||||    
T  23815973 tgcttatcatgataagcacttatgtataagttatttctataataaaagataa 23816024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 186 - 229
Target Start/End: Complemental strand, 35394530 - 35394487
Alignment:
Q  186 aaaataagctgaaaatagcttatgaaaaatgtcataaactattt 229  Q
    |||||||| |||||| |||||||||| |||||||||||||||||    
T  35394530 aaaataagttgaaaacagcttatgaacaatgtcataaactattt 35394487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 88 - 175
Target Start/End: Original strand, 36189506 - 36189593
Alignment:
Q  88 tatgtataaactatttctatagtaaaagataaaatacagttaaattattcttgtttaagatataatcagtttttataagttatattgg 175  Q
    ||||||||| |||||||| |   ||||||||||||| ||||||||| || |||| || ||||||| |  |||||||||| ||||||||    
T  36189506 tatgtataagctatttctcttacaaaagataaaataaagttaaattgtttttgtatatgatataagctatttttataagatatattgg 36189593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 78 - 133
Target Start/End: Complemental strand, 44061163 - 44061108
Alignment:
Q  78 tataagcgcttatgtataaactatttctatagtaaaagataaaatacagttaaatt 133  Q
    ||||||| ||| ||||||| |||||||||||| |||||||||||||  ||||||||    
T  44061163 tataagcacttctgtataagctatttctatagcaaaagataaaataaggttaaatt 44061108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 73 - 123
Target Start/End: Complemental strand, 2304386 - 2304336
Alignment:
Q  73 atcattataagcgcttatgtataaactatttctatagtaaaagataaaata 123  Q
    ||||| ||||| | |||||||||| ||||||||||| ||||||||||||||    
T  2304386 atcatgataagtgattatgtataagctatttctataataaaagataaaata 2304336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 186 - 284
Target Start/End: Complemental strand, 24085370 - 24085273
Alignment:
Q  186 aaaataagctgaaaatagcttatgaaaaatgtcataaactattttcataagttcttccaacccagtctcataatgcttatgtccgtagataaactcaaa 284  Q
    ||||||||||||||| ||| |||||| | |  ||||| || ||||||||||||| ||||| ||||||||| ||  |||||| | |||||||| ||||||    
T  24085370 aaaataagctgaaaacagcgtatgaacagtaccataagctgttttcataagttc-tccaaaccagtctcacaaaacttatgccggtagataagctcaaa 24085273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 41029003 - 41028946
Alignment:
Q  65 aaatgcttatcattataagcgcttatgtataaactatttctatagtaaaagataaaata 123  Q
    ||||||||||||| ||||| |||||||||||| |||||||||||  |||||| ||||||    
T  41029003 aaatgcttatcat-ataagtgcttatgtataagctatttctataacaaaagaaaaaata 41028946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 46031028 - 46031082
Alignment:
Q  186 aaaataagctgaaaatagcttatgaaaaatgtcataaactattttcataagttct 240  Q
    ||||||||||||||| |||||||||| |||||||||  || ||||| ||||||||    
T  46031028 aaaataagctgaaaacagcttatgaataatgtcataggctgttttcgtaagttct 46031082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 187 - 245
Target Start/End: Complemental strand, 46778222 - 46778164
Alignment:
Q  187 aaataagctgaaaatagcttatgaaaaatgtcataaactattttcataagttcttccaa 245  Q
    |||||||||||| | | |||||||||||||||||||  | |||||||||||||| ||||    
T  46778222 aaataagctgaacaaaacttatgaaaaatgtcataagttgttttcataagttctcccaa 46778164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 123
Target Start/End: Complemental strand, 905110 - 905065
Alignment:
Q  78 tataagcgcttatgtataaactatttctatagtaaaagataaaata 123  Q
    |||||||||||| |||||| |||||||||||  |||||||||||||    
T  905110 tataagcgcttaagtataagctatttctataacaaaagataaaata 905065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 122
Target Start/End: Complemental strand, 24268288 - 24268251
Alignment:
Q  85 gcttatgtataaactatttctatagtaaaagataaaat 122  Q
    ||||||||||||||||||||||||| ||||| ||||||    
T  24268288 gcttatgtataaactatttctatagcaaaagttaaaat 24268251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 133
Target Start/End: Complemental strand, 36783484 - 36783419
Alignment:
Q  69 gcttatcattataagcgcttatgtataaa-ctatttctatagtaaaagataaaatacagttaaatt 133  Q
    ||||||||| ||||| | ||||||||||| |||||||||||  ||||||||||||| ||| |||||    
T  36783484 gcttatcatgataagtgtttatgtataaagctatttctataccaaaagataaaataaagtaaaatt 36783419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 240
Target Start/End: Original strand, 49556897 - 49556950
Alignment:
Q  187 aaataagctgaaaatagcttatgaaaaatgtcataaactattttcataagttct 240  Q
    ||||||| |||||| |||||||||||| |||||||| || ||||||||| ||||    
T  49556897 aaataagttgaaaaaagcttatgaaaattgtcataagctgttttcataaattct 49556950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 88 - 136
Target Start/End: Original strand, 1395611 - 1395659
Alignment:
Q  88 tatgtataaactatttctatagtaaaagataaaatacagttaaattatt 136  Q
    ||||||||| |||||||||||  ||||||||||||| ||| ||||||||    
T  1395611 tatgtataagctatttctataacaaaagataaaataaagtcaaattatt 1395659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 93 - 133
Target Start/End: Complemental strand, 30956751 - 30956711
Alignment:
Q  93 ataaactatttctatagtaaaagataaaatacagttaaatt 133  Q
    |||| |||||||||||| ||||||||||||| |||||||||    
T  30956751 ataagctatttctatagcaaaagataaaataaagttaaatt 30956711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 93 - 133
Target Start/End: Complemental strand, 30972563 - 30972523
Alignment:
Q  93 ataaactatttctatagtaaaagataaaatacagttaaatt 133  Q
    |||| |||||||||||| ||||||||||||| |||||||||    
T  30972563 ataagctatttctatagcaaaagataaaataaagttaaatt 30972523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 70 - 122
Target Start/End: Complemental strand, 34632206 - 34632154
Alignment:
Q  70 cttatcattataagcgcttatgtataaactatttctatagtaaaagataaaat 122  Q
    |||||||| |||| ||||||| ||||| | |||||||||| ||||||||||||    
T  34632206 cttatcatgataatcgcttatatataagcaatttctatagaaaaagataaaat 34632154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 93 - 141
Target Start/End: Complemental strand, 35959581 - 35959533
Alignment:
Q  93 ataaactatttctatagtaaaagataaaatacagttaaattattcttgt 141  Q
    |||| |||||||||||| ||| ||||||||| |||||||||||| ||||    
T  35959581 ataagctatttctatagaaaaggataaaataaagttaaattatttttgt 35959533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 85 - 133
Target Start/End: Complemental strand, 39602342 - 39602294
Alignment:
Q  85 gcttatgtataaactatttctatagtaaaagataaaatacagttaaatt 133  Q
    ||||||| |||| |||||||||||| ||||||||| ||| |||||||||    
T  39602342 gcttatgcataagctatttctatagaaaaagataacataaagttaaatt 39602294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 156 - 240
Target Start/End: Original strand, 39980737 - 39980821
Alignment:
Q  156 gtttttataagttatattggtcatccgatcaaaataagctgaaaatagcttatgaaaaatgtcataaactattttcataagttct 240  Q
    ||||||||||| ||||||||  | |  || |||||||| |||||| |||||||||||   ||||||| || ||||||||||||||    
T  39980737 gtttttataagctatattggagaacttatgaaaataagttgaaaaaagcttatgaaaccagtcataagctgttttcataagttct 39980821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 89 - 133
Target Start/End: Original strand, 42809242 - 42809286
Alignment:
Q  89 atgtataaactatttctatagtaaaagataaaatacagttaaatt 133  Q
    |||||||| |||||||||||  ||||||||||||| |||||||||    
T  42809242 atgtataagctatttctataacaaaagataaaatatagttaaatt 42809286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 71 - 131
Target Start/End: Original strand, 46030911 - 46030971
Alignment:
Q  71 ttatcattataagcgcttatgtataaactatttctatagtaaaagataaaatacagttaaa 131  Q
    ||||||| |||| | ||||| ||||| ||||||| |||| ||||||||||||| |||||||    
T  46030911 ttatcatgataaacacttatatataagctatttcgatagaaaaagataaaataaagttaaa 46030971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 1e-17; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 72 - 146
Target Start/End: Original strand, 42457872 - 42457946
Alignment:
Q  72 tatcattataagcgcttatgtataaactatttctatagtaaaagataaaatacagttaaattattcttgtttaag 146  Q
    |||||| ||||||  |||||||||| |||||||||||||||||||||||||| ||||||||| || |||||||||    
T  42457872 tatcatgataagcatttatgtataatctatttctatagtaaaagataaaataaagttaaattgtttttgtttaag 42457946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 65 - 152
Target Start/End: Complemental strand, 42420447 - 42420360
Alignment:
Q  65 aaatgcttatcattataagcgcttatgtataaactatttctatagtaaaagataaaatacagttaaattattcttgtttaagatataa 152  Q
    ||||||||||||| ||||||||||| |||||| |||||| ||||| |||||||||||||  |||||||| || |||| || |||||||    
T  42420447 aaatgcttatcatgataagcgcttacgtataagctatttttatagcaaaagataaaataacgttaaattgtttttgtatatgatataa 42420360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 93 - 245
Target Start/End: Original strand, 32592532 - 32592683
Alignment:
Q  93 ataaactatttctatagtaaaagataaaatacagttaaattattcttgtttaagatataatcagtttttataagttatattggtcatccgatcaaaataa 192  Q
    ||||||||||| ||||| |||||||||||||  |||||||| || |||| || | |||||   |||||||||||  |||||||  | |  || |||||||    
T  32592532 ataaactatttttatagaaaaagataaaataatgttaaattgtt-ttgtatacgctataagttgtttttataagcaatattggagaacttatgaaaataa 32592630  T
Q  193 gctgaaaatagcttatgaaaaatgtcataaactattttcataagttcttccaa 245  Q
    | ||| || |||||||||||| |||| ||| ||||||||||||||||| ||||    
T  32592631 gttgagaaaagcttatgaaaattgtcgtaagctattttcataagttctcccaa 32592683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 69 - 136
Target Start/End: Original strand, 4026738 - 4026805
Alignment:
Q  69 gcttatcattataagcgcttatgtataaactatttctatagtaaaagataaaatacagttaaattatt 136  Q
    ||||||||| ||||| |||||| ||||| |||||| ||||| ||||||||||||| ||||||||||||    
T  4026738 gcttatcatgataagtgcttatctataagctatttttatagcaaaagataaaataaagttaaattatt 4026805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 79 - 238
Target Start/End: Original strand, 18066059 - 18066218
Alignment:
Q  79 ataagcgcttatgtataaactatttctatagtaaaagataaaatacagttaaattattcttgtttaagatataatcagtttttataagttatattggtca 178  Q
    ||||||||| ||||| || ||||||||| ||||||| || ||||| ||||||||| || |  | |||| ||||| | ||||| ||||| ||| ||||  |    
T  18066059 ataagcgctcatgtagaagctatttctacagtaaaatatgaaataaagttaaattgttttcatataagctataagctgttttcataagctatcttggaga 18066158  T
Q  179 tccgatcaaaataagctgaaaatagcttatgaaaaatgtcataaactattttcataagtt 238  Q
     |  |  |||||||| ||||||||||||||||  |||||||||| || ||||||||||||    
T  18066159 acttaagaaaataaggtgaaaatagcttatgagcaatgtcataagctgttttcataagtt 18066218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 70 - 284
Target Start/End: Original strand, 2416235 - 2416448
Alignment:
Q  70 cttatcattataagcgcttatgtataaactatttctatagtaaaagataaaatacagttaaattattcttgtttaagatataatcagtttttataagtta 169  Q
    ||||||||  |||| ||||||||||||  ||||||| ||| ||||||||||||  ||||||||| || |  | |||| ||||| | ||||||||||||||    
T  2416235 cttatcatgttaagtgcttatgtataagttatttctgtagcaaaagataaaatgaagttaaattgttttgatataagctataagctgtttttataagtta 2416334  T
Q  170 tattggtcatccgatcaaaataagctgaaaatagcttatgaaaaatgtcataaactattttcataagttcttccaacccagtctcataatgcttatgtcc 269  Q
    |||  |  | |  || ||| || ||||||| |||||| |||| |||| || || || |||| ||||||||||||||  |||| ||| ||  |||||||      
T  2416335 tataagagaacttatgaaagtatgctgaaattagcttgtgaacaatgacaaaagctgttttaataagttcttccaa-gcagtttcacaaaacttatgtta 2416433  T
Q  270 gtagataaactcaaa 284  Q
    |||||||||||||||    
T  2416434 gtagataaactcaaa 2416448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 186 - 284
Target Start/End: Complemental strand, 19608665 - 19608568
Alignment:
Q  186 aaaataagctgaaaatagcttatgaaaaatgtcataaactattttcataagttcttccaacccagtctcataatgcttatgtccgtagataaactcaaa 284  Q
    |||||||||| ||||||||||||||| |||||||||| || | || |||||||||  |||  |||||||||||  | |||||| |||||||||||||||    
T  19608665 aaaataagctcaaaatagcttatgaagaatgtcataagctgtgtttataagttctcgcaa-acagtctcataaaacctatgtcagtagataaactcaaa 19608568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 186 - 245
Target Start/End: Original strand, 45229549 - 45229608
Alignment:
Q  186 aaaataagctgaaaatagcttatgaaaaatgtcataaactattttcataagttcttccaa 245  Q
    ||||||||||||||| |||| ||||||||||||||||  | |||||||||||||| ||||    
T  45229549 aaaataagctgaaaaaagctaatgaaaaatgtcataaggtcttttcataagttctcccaa 45229608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 186 - 236
Target Start/End: Original strand, 41170552 - 41170601
Alignment:
Q  186 aaaataagctgaaaatagcttatgaaaaatgtcataaactattttcataag 236  Q
    |||||||||| |||||||||||| ||| |||||||||||||||||||||||    
T  41170552 aaaataagcttaaaatagcttat-aaacatgtcataaactattttcataag 41170601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 187 - 245
Target Start/End: Complemental strand, 41812123 - 41812065
Alignment:
Q  187 aaataagctgaaaatagcttatgaaaaatgtcataaactattttcataagttcttccaa 245  Q
    ||||||| |||||| ||||||||||||||||||||| || |||||| ||||||| ||||    
T  41812123 aaataagttgaaaaaagcttatgaaaaatgtcataagctgttttcaaaagttctcccaa 41812065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 13866826 - 13866863
Alignment:
Q  85 gcttatgtataaactatttctatagtaaaagataaaat 122  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  13866826 gcttatgtataaactatttctatagcaaaagataaaat 13866863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 186 - 222
Target Start/End: Original strand, 9174853 - 9174889
Alignment:
Q  186 aaaataagctgaaaatagcttatgaaaaatgtcataa 222  Q
    |||||||||||||||||||||||||| ||||||||||    
T  9174853 aaaataagctgaaaatagcttatgaacaatgtcataa 9174889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 69 - 133
Target Start/End: Original strand, 39567824 - 39567888
Alignment:
Q  69 gcttatcattataagcgcttatgtataaactatttctatagtaaaagataaaatacagttaaatt 133  Q
    ||||||||| |||||| ||| |||||||  ||||||||||  ||||||||||||| |||||||||    
T  39567824 gcttatcatgataagcacttgtgtataagatatttctataacaaaagataaaataaagttaaatt 39567888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 133
Target Start/End: Original strand, 3611152 - 3611211
Alignment:
Q  74 tcattataagcgcttatgtataaactatttctatagtaaaagataaaatacagttaaatt 133  Q
    |||| ||||| ||||||||||||  ||||||||||| ||||| ||||||| |||||||||    
T  3611152 tcatgataagtgcttatgtataagttatttctatagcaaaaggtaaaataaagttaaatt 3611211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 186 - 245
Target Start/End: Original strand, 16451156 - 16451215
Alignment:
Q  186 aaaataagctgaaaatagcttatgaaaaatgtcataaactattttcataagttcttccaa 245  Q
    ||||||||||||||| |||| ||||| ||||||||||  | |||||||||||||| ||||    
T  16451156 aaaataagctgaaaacagctcatgaacaatgtcataagttgttttcataagttctcccaa 16451215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 183 - 237
Target Start/End: Original strand, 449882 - 449936
Alignment:
Q  183 atcaaaataagctgaaaatagcttatgaaaaatgtcataaactattttcataagt 237  Q
    |||||| |||| | |||||||||||||||||||||||||| || |||||| ||||    
T  449882 atcaaattaagttaaaaatagcttatgaaaaatgtcataagctgttttcaaaagt 449936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 187 - 241
Target Start/End: Original strand, 750709 - 750763
Alignment:
Q  187 aaataagctgaaaatagcttatgaaaaatgtcataaactattttcataagttctt 241  Q
    ||||||||| |||| |||||||||| |||||||| | || |||||||||||||||    
T  750709 aaataagctcaaaacagcttatgaacaatgtcattagctcttttcataagttctt 750763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 186 - 236
Target Start/End: Complemental strand, 11201413 - 11201363
Alignment:
Q  186 aaaataagctgaaaatagcttatgaaaaatgtcataaactattttcataag 236  Q
    ||||| || |||||| |||||||||||  ||||||||||||||||||||||    
T  11201413 aaaatgagttgaaaaaagcttatgaaagttgtcataaactattttcataag 11201363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 72 - 146
Target Start/End: Complemental strand, 12313318 - 12313245
Alignment:
Q  72 tatcattataagcgcttatgtataaactatttctatagtaaaagataaaatacagttaaattattcttgtttaag 146  Q
    |||||| ||||||| ||| ||||||||| ||| |||   ||||||||||||| |||||||||||| |||||||||    
T  12313318 tatcatgataagcgtttacgtataaactgttt-tatcacaaaagataaaataaagttaaattatttttgtttaag 12313245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 20926541 - 20926594
Alignment:
Q  186 aaaataagctgaaaatagcttatgaaaaatgtcataaactattttcataagttct 240  Q
    |||||||| |||||| |||| ||||||| |||||||||||| |||||||||||||    
T  20926541 aaaataagttgaaaaaagctaatgaaaattgtcataaacta-tttcataagttct 20926594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 72 - 146
Target Start/End: Complemental strand, 36114669 - 36114595
Alignment:
Q  72 tatcattataagcgcttatgtataaactatttctatagtaaaagataaaatacagttaaattattcttgtttaag 146  Q
    |||||| ||||| ||||||| |||| ||| |||||||  ||||||||||||| ||||||||| || |||| ||||    
T  36114669 tatcatgataagtgcttatgcataacctagttctataacaaaagataaaataaagttaaattgtttttgtataag 36114595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 43279561 - 43279507
Alignment:
Q  186 aaaataagctgaaaatagcttatgaaaaatgtcataaactattttcataagttct 240  Q
    |||||||| |||||| |||||||||||| |||||||| || ||||||||| ||||    
T  43279561 aaaataagttgaaaaaagcttatgaaaattgtcataagctgttttcataaattct 43279507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 43570452 - 43570505
Alignment:
Q  186 aaaataagctgaaaatagcttatgaaaaatgtcataaactattttcataagttct 240  Q
    |||||||||| |||| |||||||||| |||||||||| || ||||||||||||||    
T  43570452 aaaataagctaaaaa-agcttatgaacaatgtcataagctgttttcataagttct 43570505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 122
Target Start/End: Original strand, 1985488 - 1985541
Alignment:
Q  69 gcttatcattataagcgcttatgtataaactatttctatagtaaaagataaaat 122  Q
    ||||||||| ||||| |||| ||||||||| |||||||||  ||||||||||||    
T  1985488 gcttatcatgataagtgcttttgtataaaccatttctatatcaaaagataaaat 1985541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 170
Target Start/End: Original strand, 5133709 - 5133794
Alignment:
Q  85 gcttatgtataaactatttctatagtaaaagataaaatacagttaaattattcttgtttaagatataatcagtttttataagttat 170  Q
    |||||||||||| |||||||||||  ||||||||||||| || |||| | || || | |||||||||| | ||||| | |||||||    
T  5133709 gcttatgtataagctatttctataacaaaagataaaataaagataaactgtttttatataagatataagctgttttcaaaagttat 5133794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 204 - 245
Target Start/End: Original strand, 20933787 - 20933828
Alignment:
Q  204 cttatgaaaaatgtcataaactattttcataagttcttccaa 245  Q
    |||||||||| ||||||||||| |||||||||||||| ||||    
T  20933787 cttatgaaaattgtcataaactgttttcataagttctcccaa 20933828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 79 - 136
Target Start/End: Original strand, 25609727 - 25609784
Alignment:
Q  79 ataagcgcttatgtataaactatttctatagtaaaagataaaatacagttaaattatt 136  Q
    ||||| |||||||||||| |||||||||||  ||||||||||||| ||| || |||||    
T  25609727 ataagtgcttatgtataagctatttctataagaaaagataaaataaagtcaatttatt 25609784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 90 - 135
Target Start/End: Complemental strand, 26143769 - 26143724
Alignment:
Q  90 tgtataaactatttctatagtaaaagataaaatacagttaaattat 135  Q
    ||||||| |||||||||||| ||||||||||||| |||| ||||||    
T  26143769 tgtataagctatttctatagcaaaagataaaataaagttcaattat 26143724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 189 - 242
Target Start/End: Original strand, 33192243 - 33192295
Alignment:
Q  189 ataagctgaaaatagcttatgaaaaatgtcataaactattttcataagttcttc 242  Q
    |||||||||||| |||||||| | | ||||||||||| ||||||||||||||||    
T  33192243 ataagctgaaaacagcttatggata-tgtcataaactgttttcataagttcttc 33192295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 123
Target Start/End: Original strand, 34339053 - 34339098
Alignment:
Q  78 tataagcgcttatgtataaactatttctatagtaaaagataaaata 123  Q
    |||||| ||||||||||||||| |||||||||  ||||||||||||    
T  34339053 tataagtgcttatgtataaactttttctatagctaaagataaaata 34339098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 86 - 123
Target Start/End: Original strand, 37033982 - 37034019
Alignment:
Q  86 cttatgtataaactatttctatagtaaaagataaaata 123  Q
    |||||||||||||||||||||||  |||||||||||||    
T  37033982 cttatgtataaactatttctataaaaaaagataaaata 37034019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 63 - 96
Target Start/End: Complemental strand, 39659673 - 39659640
Alignment:
Q  63 acaaatgcttatcattataagcgcttatgtataa 96  Q
    ||||||||||||||| ||||||||||||||||||    
T  39659673 acaaatgcttatcatgataagcgcttatgtataa 39659640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 114
Target Start/End: Complemental strand, 40682522 - 40682477
Alignment:
Q  69 gcttatcattataagcgcttatgtataaactatttctatagtaaaa 114  Q
    |||||||||  ||||||||||||||||| |||||||||||| ||||    
T  40682522 gcttatcatggtaagcgcttatgtataagctatttctatagcaaaa 40682477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 70 - 132
Target Start/End: Original strand, 44600461 - 44600525
Alignment:
Q  70 cttatcattataagcgcttatgtataaactatttctatag--taaaagataaaatacagttaaat 132  Q
    |||||| | ||||| |||||||||||| ||||||||||||   ||||||||||||| ||||||||    
T  44600461 cttatcgtgataagtgcttatgtataagctatttctatagccaaaaagataaaataaagttaaat 44600525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 78 - 138
Target Start/End: Original strand, 31461368 - 31461428
Alignment:
Q  78 tataagcgcttatgtataaactatttctatagtaaaagataaaatacagttaaattattct 138  Q
    |||||| | |||| ||||| |||||||||||  ||||||||||||| ||| ||||||||||    
T  31461368 tataagtggttatatataagctatttctataacaaaagataaaataaagtcaaattattct 31461428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 189 - 245
Target Start/End: Original strand, 33503048 - 33503103
Alignment:
Q  189 ataagctgaaaatagcttatgaaaaatgtcataaactattttcataagttcttccaa 245  Q
    ||||||||||||||||||||| |||||||||||| ||  |||||||| |||| ||||    
T  33503048 ataagctgaaaatagcttatg-aaaatgtcataagctgatttcataaattctcccaa 33503103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 186 - 238
Target Start/End: Original strand, 36534806 - 36534858
Alignment:
Q  186 aaaataagctgaaaatagcttatgaaaaatgtcataaactattttcataagtt 238  Q
    |||||||||||||||||| ||||||| ||| | |||| || ||||||||||||    
T  36534806 aaaataagctgaaaatagattatgaacaattttataagctgttttcataagtt 36534858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 189 - 245
Target Start/End: Complemental strand, 41293192 - 41293136
Alignment:
Q  189 ataagctgaaaatagcttatgaaaaatgtcataaactattttcataagttcttccaa 245  Q
    |||||||||||| ||||||||  ||||||||||| || |||| ||||||||| ||||    
T  41293192 ataagctgaaaacagcttatgcgaaatgtcataagctgtttttataagttctcccaa 41293136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 208 - 284
Target Start/End: Original strand, 42419853 - 42419928
Alignment:
Q  208 tgaaaaatgtcataaactattttcataagttcttccaacccagtctcataatgcttatgtccgtagataaactcaaa 284  Q
    ||||||||||||||| || ||||| |||||||| ||||  |||||||| ||  |||||||| | |||||||||||||    
T  42419853 tgaaaaatgtcataagctgttttcgtaagttctcccaa-acagtctcaaaaaacttatgtcagaagataaactcaaa 42419928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 70 - 133
Target Start/End: Original strand, 43570338 - 43570399
Alignment:
Q  70 cttatcattataagcgcttatgtataaactatttctatagtaaaagataaaatacagttaaatt 133  Q
    |||||||| ||||||||||  |||||| ||| ||||||||||||| |||||||  |||||||||    
T  43570338 cttatcatgataagcgctt--gtataagctaattctatagtaaaatataaaatgaagttaaatt 43570399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 86 - 130
Target Start/End: Original strand, 44119722 - 44119766
Alignment:
Q  86 cttatgtataaactatttctatagtaaaagataaaatacagttaa 130  Q
    |||||||||||  ||||| ||||||||||||||||||| ||||||    
T  44119722 cttatgtataagttatttttatagtaaaagataaaataaagttaa 44119766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 5e-17; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 79 - 240
Target Start/End: Original strand, 10114421 - 10114581
Alignment:
Q  79 ataagcgcttatgtataaactatttctatagtaaaagataaaatacagttaaattattcttgtttaagatataatcagtttttataagttatattggtca 178  Q
    ||||| |||||||||||| |||||||||||| ||||||||||||| |||| |||| || | || |||| ||||| | ||||| || || ||||||||  |    
T  10114421 ataagtgcttatgtataagctatttctatagcaaaagataaaata-agttgaattgttttggtataagctataagctgttttcattagctatattggaga 10114519  T
Q  179 tccgatcaaaataagctgaaaatagcttatgaaaaatgtcataaactattttcataagttct 240  Q
     |  || ||||||||||||||| ||| ||||| |||||| ||||  | ||||||||||||||    
T  10114520 acatatgaaaataagctgaaaacagcatatgataaatgttataagttgttttcataagttct 10114581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 93 - 282
Target Start/End: Original strand, 26771210 - 26771398
Alignment:
Q  93 ataaactatttctatagtaaaagataaaatacagttaaattattcttgtttaagatataatcagtttttataagttatattggtcatccgatcaaaataa 192  Q
    |||| ||||||||||||||||  |||||||| | ||||||| || |||| || | ||||| |  |||||||||| |||||| |  | |  || |||||||    
T  26771210 ataagctatttctatagtaaagcataaaataaacttaaattgtttttgtatatgctataagctttttttataagatatattagagaacttatgaaaataa 26771309  T
Q  193 gctgaaaatagcttatgaaaaatgtcataaactattttcataagttcttccaacccagtctcataatgcttatgtccgtagataaactca 282  Q
    | ||||||  |||| |||||| |||||||| || |||||||||||||| ||||  |||||||| ||  |||||| |||||||||| ||||    
T  26771310 gttgaaaaaggcttttgaaaattgtcataagctgttttcataagttctcccaa-acagtctcacaaaacttatgcccgtagataagctca 26771398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 186 - 238
Target Start/End: Complemental strand, 35644020 - 35643968
Alignment:
Q  186 aaaataagctgaaaatagcttatgaaaaatgtcataaactattttcataagtt 238  Q
    |||||||| |||||| |||||||||||| ||||||||||||||||||||||||    
T  35644020 aaaataagttgaaaaaagcttatgaaaattgtcataaactattttcataagtt 35643968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 186 - 245
Target Start/End: Original strand, 1930073 - 1930132
Alignment:
Q  186 aaaataagctgaaaatagcttatgaaaaatgtcataaactattttcataagttcttccaa 245  Q
    ||||||||||||||| |||||||||| ||||||||||||| |||||| ||||||| ||||    
T  1930073 aaaataagctgaaaacagcttatgaacaatgtcataaactgttttcacaagttctcccaa 1930132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 69 - 136
Target Start/End: Original strand, 26215417 - 26215484
Alignment:
Q  69 gcttatcattataagcgcttatgtataaactatttctatagtaaaagataaaatacagttaaattatt 136  Q
    |||||| || |||||||||||||||||| |||||||||||  ||||||||||||| ||||||| ||||    
T  26215417 gcttataatgataagcgcttatgtataagctatttctataacaaaagataaaataaagttaaactatt 26215484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 87 - 136
Target Start/End: Original strand, 4558737 - 4558786
Alignment:
Q  87 ttatgtataaactatttctatagtaaaagataaaatacagttaaattatt 136  Q
    |||||||||| ||||||||||| |||||||||||||| ||||||||||||    
T  4558737 ttatgtataagctatttctataataaaagataaaataaagttaaattatt 4558786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 68 - 133
Target Start/End: Original strand, 14482123 - 14482187
Alignment:
Q  68 tgcttatcattataagcgcttatgtataaactatttctatagtaaaagataaaatacagttaaatt 133  Q
    |||||||||| ||||| ||||||||||||||||||||||||  ||||||||||||| ||| |||||    
T  14482123 tgcttatcat-ataagtgcttatgtataaactatttctataacaaaagataaaataaagtcaaatt 14482187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 65 - 133
Target Start/End: Complemental strand, 37353401 - 37353334
Alignment:
Q  65 aaatgcttatcattataagcgcttatgtataaactatttctatagtaaaagataaaatacagttaaatt 133  Q
    |||||||||| || ||||||||||||||| ||||||||||||||  ||||||| ||||| |||||||||    
T  37353401 aaatgcttatgatgataagcgcttatgtacaaactatttctataacaaaagat-aaataaagttaaatt 37353334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 79 - 122
Target Start/End: Complemental strand, 14280540 - 14280497
Alignment:
Q  79 ataagcgcttatgtataaactatttctatagtaaaagataaaat 122  Q
    |||||||||||||||||| |||||||||||| ||||||||||||    
T  14280540 ataagcgcttatgtataacctatttctatagcaaaagataaaat 14280497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 105 - 240
Target Start/End: Complemental strand, 16825650 - 16825516
Alignment:
Q  105 tatagtaaaagataaaatacagttaaattattcttgtttaagatataatcagtttttataagttatattggtcatccgatcaaaataagctgaaaatagc 204  Q
    ||||||||| |||||||||  |||||||| || ||||||| | |||||   |||| || ||| |||||||   | |  || |||||||| |||||| |||    
T  16825650 tatagtaaaggataaaataatgttaaattgtttttgtttacgttataagttgtttctacaagctatattgccgaacttatgaaaataagttgaaaa-agc 16825552  T
Q  205 ttatgaaaaatgtcataaactattttcataagttct 240  Q
    ||||||||| |||||||| |||||||||||||||||    
T  16825551 ttatgaaaattgtcataagctattttcataagttct 16825516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 186 - 245
Target Start/End: Original strand, 27028869 - 27028928
Alignment:
Q  186 aaaataagctgaaaatagcttatgaaaaatgtcataaactattttcataagttcttccaa 245  Q
    ||||||||||||||||||||||||||||||||| ||| || |||||| || |||| ||||    
T  27028869 aaaataagctgaaaatagcttatgaaaaatgtcctaagctgttttcagaatttctcccaa 27028928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 70 - 133
Target Start/End: Complemental strand, 37444563 - 37444500
Alignment:
Q  70 cttatcattataagcgcttatgtataaactatttctatagtaaaagataaaatacagttaaatt 133  Q
    |||||||| |||||||||||||||||| ||||| |||||  |||||||||| || |||||||||    
T  37444563 cttatcatgataagcgcttatgtataagctattactataacaaaagataaagtaaagttaaatt 37444500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 74 - 133
Target Start/End: Complemental strand, 41475204 - 41475145
Alignment:
Q  74 tcattataagcgcttatgtataaactatttctatagtaaaagataaaatacagttaaatt 133  Q
    |||| |||||| ||||||||||| ||| || ||||| |||||||||||||||||||||||    
T  41475204 tcatgataagcacttatgtataagctaattttatagcaaaagataaaatacagttaaatt 41475145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 9956846 - 9956792
Alignment:
Q  186 aaaataagctgaaaatagcttatgaaaaatgtcataaactattttcataagttct 240  Q
    |||||||||||||||   |||||||| |||| |||||||||||||||||||||||    
T  9956846 aaaataagctgaaaactacttatgaacaatgccataaactattttcataagttct 9956792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 10120794 - 10120848
Alignment:
Q  186 aaaataagctgaaaatagcttatgaaaaatgtcataaactattttcataagttct 240  Q
    ||||||||||||||| ||| ||||| ||||||||||| || ||||||||||||||    
T  10120794 aaaataagctgaaaacagcatatgataaatgtcataagctgttttcataagttct 10120848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 192 - 242
Target Start/End: Complemental strand, 12782211 - 12782161
Alignment:
Q  192 agctgaaaatagcttatgaaaaatgtcataaactattttcataagttcttc 242  Q
    ||||||||| |||||||||| |||||||||  |||||||||||||||||||    
T  12782211 agctgaaaagagcttatgaacaatgtcatagcctattttcataagttcttc 12782161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 36338200 - 36338254
Alignment:
Q  186 aaaataagctgaaaatagcttatgaaaaatgtcataaactattttcataagttct 240  Q
    |||||||||||||||||||||  ||||||||||||||| | |||||| |||||||    
T  36338200 aaaataagctgaaaatagctttggaaaaatgtcataaattgttttcacaagttct 36338254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 187 - 240
Target Start/End: Complemental strand, 31716258 - 31716205
Alignment:
Q  187 aaataagctgaaaatagcttatgaaaaatgtcataaactattttcataagttct 240  Q
    |||||||||||||| |||||||||| |||||||||| || |||||| |||||||    
T  31716258 aaataagctgaaaaaagcttatgaagaatgtcataagctgttttcaaaagttct 31716205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 81 - 129
Target Start/End: Original strand, 1929984 - 1930032
Alignment:
Q  81 aagcgcttatgtataaactatttctatagtaaaagataaaatacagtta 129  Q
    ||||||||||||||||  ||||||||||| ||||||||||||| |||||    
T  1929984 aagcgcttatgtataagttatttctatagaaaaagataaaataaagtta 1930032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 186 - 222
Target Start/End: Complemental strand, 31751589 - 31751553
Alignment:
Q  186 aaaataagctgaaaatagcttatgaaaaatgtcataa 222  Q
    |||||||||||||||||||||||||| ||||||||||    
T  31751589 aaaataagctgaaaatagcttatgaacaatgtcataa 31751553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 245
Target Start/End: Original strand, 8146371 - 8146426
Alignment:
Q  190 taagctgaaaatagcttatgaaaaatgtcataaactattttcataagttcttccaa 245  Q
    ||||||| ||| | |||||||||| ||||||||||| |||||||||||||| ||||    
T  8146371 taagctggaaaaaacttatgaaaagtgtcataaactgttttcataagttctcccaa 8146426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 70 - 129
Target Start/End: Complemental strand, 16211034 - 16210975
Alignment:
Q  70 cttatcattataagcgcttatgtataaactatttctatagtaaaagataaaatacagtta 129  Q
    |||||||| ||| || || |||||||| |||||||||||||||| ||||||||| |||||    
T  16211034 cttatcatgatacgcactcatgtataagctatttctatagtaaatgataaaataaagtta 16210975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 186 - 245
Target Start/End: Complemental strand, 32841018 - 32840959
Alignment:
Q  186 aaaataagctgaaaatagcttatgaaaaatgtcataaactattttcataagttcttccaa 245  Q
    ||||||||||||||| | |||||||| ||||||||||  | |||||||||||||| ||||    
T  32841018 aaaataagctgaaaacaacttatgaacaatgtcataagttgttttcataagttctcccaa 32840959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 186 - 245
Target Start/End: Original strand, 33808341 - 33808400
Alignment:
Q  186 aaaataagctgaaaatagcttatgaaaaatgtcataaactattttcataagttcttccaa 245  Q
    |||||||||| |||| | |||||||| ||| |||||| ||||||||||||||||| ||||    
T  33808341 aaaataagctaaaaacaacttatgaacaatatcataagctattttcataagttctcccaa 33808400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 186 - 284
Target Start/End: Complemental strand, 30251486 - 30251389
Alignment:
Q  186 aaaataagctgaaaatagcttatgaaaaatgtcataaactattttcataagttcttccaacccagtctcataatgcttatgtccgtagataaactcaaa 284  Q
    ||||||||||| ||| |||||||||||||||  |||| || ||||| |||||||| ||||  ||||||||  |  |||||||| |||||||| ||||||    
T  30251486 aaaataagctgtaaaaagcttatgaaaaatgcaataagctgttttcgtaagttctcccaa-acagtctcacgaaacttatgtcagtagataagctcaaa 30251389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 79 - 145
Target Start/End: Complemental strand, 37153029 - 37152963
Alignment:
Q  79 ataagcgcttatgtataaactatttctatagtaaaagataaaatacagttaaattattcttgtttaa 145  Q
    ||||||||||||||||||  ||||||||||  |||  |||||||| ||||||||| || ||||||||    
T  37153029 ataagcgcttatgtataatatatttctataacaaagtataaaataaagttaaattgtttttgtttaa 37152963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 73 - 123
Target Start/End: Complemental strand, 43718075 - 43718025
Alignment:
Q  73 atcattataagcgcttatgtataaactatttctatagtaaaagataaaata 123  Q
    ||||| |||||||||||| ||||| |||||||||| | |||||||||||||    
T  43718075 atcatcataagcgcttatctataagctatttctatcgcaaaagataaaata 43718025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 89 - 134
Target Start/End: Complemental strand, 1470985 - 1470940
Alignment:
Q  89 atgtataaactatttctatagtaaaagataaaatacagttaaatta 134  Q
    |||||||| ||||||||||| |||||||||||||| ||| ||||||    
T  1470985 atgtataagctatttctataataaaagataaaataaagtcaaatta 1470940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 134
Target Start/End: Original strand, 27492880 - 27492945
Alignment:
Q  69 gcttatcattataagcgcttatgtataaactatttctatagtaaaagataaaatacagttaaatta 134  Q
    ||||||||| |||||| |||||||||||  ||||||||||| ||||||| ||| | ||||| ||||    
T  27492880 gcttatcatgataagcacttatgtataaggtatttctatagcaaaagatgaaaaatagttacatta 27492945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 79 - 128
Target Start/End: Original strand, 27754334 - 27754383
Alignment:
Q  79 ataagcgcttatgtataaactatttctatagtaaaagataaaatacagtt 128  Q
    ||||| ||||||||||||||||||||||| | |||| |||||||| ||||    
T  27754334 ataagagcttatgtataaactatttctattgcaaaatataaaataaagtt 27754383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 69 - 133
Target Start/End: Original strand, 3936770 - 3936834
Alignment:
Q  69 gcttatcattataagcgcttatgtataaactatttctatagtaaaagataaaatacagttaaatt 133  Q
    ||||||||| ||| || ||||||||||| |||||||||||  ||| ||||||||| || ||||||    
T  3936770 gcttatcatgataggcacttatgtataatctatttctataacaaaggataaaataaagctaaatt 3936834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 187 - 239
Target Start/End: Original strand, 10383924 - 10383975
Alignment:
Q  187 aaataagctgaaaatagcttatgaaaaatgtcataaactattttcataagttc 239  Q
    |||||||||| ||| |||||||||||| |||||||| || |||||||||||||    
T  10383924 aaataagctgtaaacagcttatgaaaa-tgtcataagctgttttcataagttc 10383975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 95 - 175
Target Start/End: Complemental strand, 29169015 - 29168935
Alignment:
Q  95 aaactatttctatagtaaaagataaaatacagttaaattattcttgtttaagatataatcagtttttataagttatattgg 175  Q
    ||||| ||||||||| ||||||||||||  | |||||||||| |||| || | ||||| | |||||  |||||||||||||    
T  29169015 aaactgtttctatagcaaaagataaaattaaattaaattatttttgtatatgttataagctgttttcctaagttatattgg 29168935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 63 - 123
Target Start/End: Complemental strand, 40859873 - 40859813
Alignment:
Q  63 acaaatgcttatcattataagcgcttatgtataaactatttctatagtaaaagataaaata 123  Q
    |||| |||||||||| |||||||||||||||||| |||||| | |||   |||||||||||    
T  40859873 acaagtgcttatcatgataagcgcttatgtataagctatttttgtagcgtaagataaaata 40859813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 70 - 240
Target Start/End: Original strand, 45975612 - 45975782
Alignment:
Q  70 cttatcattataagcgcttatgtataaactatttctatagtaaaagataaaatacagttaaattattcttgtttaagatataatcagtttttataagtta 169  Q
    |||||||| |||||| |||||||||||||||||| ||||| ||| ||||||||| | |  || |||| |||| |||| || || | ||||| ||||| ||    
T  45975612 cttatcatgataagcccttatgtataaactatttatataggaaaggataaaatagactacaaatatttttgtataagctacaagctgttttcataagcta 45975711  T
Q  170 tattggtcatccgatcaaaataagctgaaaatagcttatgaaaaatgtcataaactattttcataagttct 240  Q
    | ||||  |    || ||||||||||||||| |||||||||| ||||| ||| ||| |||||||| |||||    
T  45975712 tcttggagaatttatgaaaataagctgaaaacagcttatgaataatgttatacactgttttcatatgttct 45975782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 70 - 241
Target Start/End: Complemental strand, 7137149 - 7136976
Alignment:
Q  70 cttatcattataagcgcttatgtataaactatttctatagtaaaagataaaatacagttaaatta---ttcttgtttaagatataatcagtttttataag 166  Q
    |||||| | |||||||||||| |||||||||||| ||||  ||||| ||||||| ||||| ||||   || |||| |||  ||||| | ||||| |||||    
T  7137149 cttatcttgataagcgcttatatataaactatttttataacaaaagttaaaataaagttagattactatttttgtataatctataagctgttttcataag 7137050  T
Q  167 ttatattggtcatccgatcaaaataagctgaaaatagcttatgaaaaatgtcataaactattttcataagttctt 241  Q
     ||| ||||  | |  || ||||||||||||||||| |||||| || ||||||||| | ||||||||||||||||    
T  7137049 ctatcttggagaacttatgaaaataagctgaaaataacttatg-aatatgtcataagcgattttcataagttctt 7136976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 186 - 238
Target Start/End: Original strand, 27976642 - 27976694
Alignment:
Q  186 aaaataagctgaaaatagcttatgaaaaatgtcataaactattttcataagtt 238  Q
    ||||||||||||||| ||||||||||||||||||||| ||||||||| |||||    
T  27976642 aaaataagctgaaaaaagcttatgaaaaatgtcataagctattttcaaaagtt 27976694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 79 - 245
Target Start/End: Original strand, 1432446 - 1432612
Alignment:
Q  79 ataagcgcttatgtataaactatttctatagtaaaagataaaatacagttaaattattcttgtttaagatataatcagtttttataagttatattggtca 178  Q
    |||||| | ||||||||| |||||||||||||||||||||||||| |||| |||| || || | |||| |||||   ||||| ||||  ||| ||||  |    
T  1432446 ataagcacatatgtataagctatttctatagtaaaagataaaatagagttcaattgtttttttataagctataaattgttttcataaactatcttggaga 1432545  T
Q  179 tccgatcaaaataagctgaaaatagcttatgaaaaatgtcataaactattttcataagttcttccaa 245  Q
     |  || ||| |||||| |  ||  |||||||| |||||||||  ||||||||||||||||||||||    
T  1432546 acttatgaaagtaagctaagtatgtcttatgaacaatgtcatacgctattttcataagttcttccaa 1432612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 93 - 235
Target Start/End: Complemental strand, 24915176 - 24915034
Alignment:
Q  93 ataaactatttctatagtaaaagataaaatacagttaaattattcttgtttaagatataatcagtttttataagttatattggtcatccgatcaaaataa 192  Q
    ||||||||||||||||| | ||||||||||| ||||||||| || |||| || | ||||| | ||||| ||||| | | ||||  | |   | |||||||    
T  24915176 ataaactatttctatagcagaagataaaataaagttaaattgtttttgtatatgctataagctgttttcataagctgtcttggagaacttgtgaaaataa 24915077  T
Q  193 gctgaaaatagcttatgaaaaatgtcataaactattttcataa 235  Q
    | |||||| |||||||||||||||||||||  | |||||||||    
T  24915076 gttgaaaaaagcttatgaaaaatgtcataagttgttttcataa 24915034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 85 - 130
Target Start/End: Original strand, 7028229 - 7028274
Alignment:
Q  85 gcttatgtataaactatttctatagtaaaagataaaatacagttaa 130  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||    
T  7028229 gcttatgtataaactatttctatagcaaaagataaaataaagttaa 7028274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 78 - 122
Target Start/End: Original strand, 6659633 - 6659677
Alignment:
Q  78 tataagcgcttatgtataaactatttctatagtaaaagataaaat 122  Q
    |||||| ||||||||||||||||||||||||| ||||||||||||    
T  6659633 tataagtgcttatgtataaactatttctatagcaaaagataaaat 6659677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 63 - 130
Target Start/End: Complemental strand, 5894318 - 5894251
Alignment:
Q  63 acaaatgcttatcattataagcgcttatgtataaactatttctatagtaaaagataaaatacagttaa 130  Q
    |||| |||||||||| |||||||||||||||||| |||||||||| ||   |||||||||| ||||||    
T  5894318 acaagtgcttatcatgataagcgcttatgtataagctatttctatggtggcagataaaataaagttaa 5894251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 186 - 245
Target Start/End: Original strand, 11941300 - 11941359
Alignment:
Q  186 aaaataagctgaaaatagcttatgaaaaatgtcataaactattttcataagttcttccaa 245  Q
    ||||||||||||||| |||||||||| ||||| |||| ||||||||||||| ||| ||||    
T  11941300 aaaataagctgaaaacagcttatgaacaatgttataagctattttcataagctctcccaa 11941359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 186 - 245
Target Start/End: Complemental strand, 27970326 - 27970267
Alignment:
Q  186 aaaataagctgaaaatagcttatgaaaaatgtcataaactattttcataagttcttccaa 245  Q
    ||||||| ||||||| |||||||||||||||||||||||  |||| ||||||||| ||||    
T  27970326 aaaataaactgaaaaaagcttatgaaaaatgtcataaaccgtttttataagttctcccaa 27970267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 186 - 284
Target Start/End: Original strand, 2295134 - 2295231
Alignment:
Q  186 aaaataagctgaaaatagcttatgaaaaatgtcataaactattttcataagttcttccaacccagtctcataatgcttatgtccgtagataaactcaaa 284  Q
    |||||||| |||| | |||||||||||| |||||||| || |||||||||||||| ||||  |||||||| ||  |||||| | |||||||| ||||||    
T  2295134 aaaataagttgaatagagcttatgaaaattgtcataagctgttttcataagttctcccaa-acagtctcacaaaacttatgccagtagataagctcaaa 2295231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 63 - 133
Target Start/End: Complemental strand, 9572263 - 9572193
Alignment:
Q  63 acaaatgcttatcattataagcgcttatgtataaactatttctatagtaaaagataaaatacagttaaatt 133  Q
    |||| ||| |||||| || |||||| |||||| | |||||||||||| ||||||||||||| |||||||||    
T  9572263 acaagtgcctatcatgatcagcgctaatgtattagctatttctatagcaaaagataaaataaagttaaatt 9572193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 72 - 122
Target Start/End: Complemental strand, 23544786 - 23544736
Alignment:
Q  72 tatcattataagcgcttatgtataaactatttctatagtaaaagataaaat 122  Q
    |||||| |||||||||||||||||| |||||||||| | ||||||||||||    
T  23544786 tatcatgataagcgcttatgtataagctatttctatggaaaaagataaaat 23544736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 85 - 123
Target Start/End: Original strand, 37591369 - 37591407
Alignment:
Q  85 gcttatgtataaactatttctatagtaaaagataaaata 123  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  37591369 gcttatgtataaactatttctataataaaagataaaata 37591407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 41184682 - 41184628
Alignment:
Q  186 aaaataagctgaaaatagcttatgaaaaatgtcataaactattttcataagttct 240  Q
    |||||||| |||||| | |||||||||| |||||||| |||||||||||||||||    
T  41184682 aaaataagttgaaaaaaacttatgaaaattgtcataagctattttcataagttct 41184628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 85 - 134
Target Start/End: Complemental strand, 3887765 - 3887716
Alignment:
Q  85 gcttatgtataaactatttctatagtaaaagataaaatacagttaaatta 134  Q
    |||||||||||| ||||||| |||| ||||||||||||| ||||||||||    
T  3887765 gcttatgtataagctatttcaatagcaaaagataaaataaagttaaatta 3887716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 98 - 238
Target Start/End: Complemental strand, 14576773 - 14576634
Alignment:
Q  98 ctatttctatagtaaaagataaaatacagttaaattattcttgtttaagatataatcagtttttataagttatattggtcatccgatcaaaataagctga 197  Q
    ||||||| |||||||| ||||||||| ||||||||| || |||| || | ||||||   |||||||||| |||||| |  | |   | ||||||||||||    
T  14576773 ctatttccatagtaaaggataaaataaagttaaattgtttttgtatatgctataatttttttttataagctatattagagaactt-tgaaaataagctga 14576675  T
Q  198 aaatagcttatgaaaaatgtcataaactattttcataagtt 238  Q
    ||| ||||| |||||| |||||||| || |||||| |||||    
T  14576674 aaaaagcttttgaaaattgtcataagctgttttcacaagtt 14576634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 70 - 133
Target Start/End: Original strand, 15784257 - 15784321
Alignment:
Q  70 cttatcattataagcgcttatgtataaactatttctatagt-aaaagataaaatacagttaaatt 133  Q
    ||||| || |||||||||||||||||| ||||||||| ||| ||||| ||||||| |||||||||    
T  15784257 cttattatgataagcgcttatgtataagctatttctaaagtaaaaaggtaaaataaagttaaatt 15784321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 68 - 120
Target Start/End: Original strand, 15942253 - 15942305
Alignment:
Q  68 tgcttatcattataagcgcttatgtataaactatttctatagtaaaagataaa 120  Q
    |||||||||| ||||| |||||||||||| |||||| ||||| ||||||||||    
T  15942253 tgcttatcatgataagtgcttatgtataagctatttatatagaaaaagataaa 15942305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 88 - 123
Target Start/End: Complemental strand, 1725241 - 1725206
Alignment:
Q  88 tatgtataaactatttctatagtaaaagataaaata 123  Q
    ||||||||||||||||||||| ||||||||||||||    
T  1725241 tatgtataaactatttctataataaaagataaaata 1725206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 186 - 245
Target Start/End: Complemental strand, 3887664 - 3887605
Alignment:
Q  186 aaaataagctgaaaatagcttatgaaaaatgtcataaactattttcataagttcttccaa 245  Q
    |||||||| | |||| |||||||||| ||||||||||  | |||||||||||||||||||    
T  3887664 aaaataagttaaaaacagcttatgaacaatgtcataagatgttttcataagttcttccaa 3887605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 111 - 238
Target Start/End: Original strand, 4576768 - 4576894
Alignment:
Q  111 aaaagataaaatacagttaaattattcttgtttaagatataatcagtttttataagttatattggtcatccgatcaaaataagctgaaaatagcttatga 210  Q
    ||||||| ||||| ||||||| |||| ||||  ||| ||||| | ||||| ||||| |||||||   | |  || ||||||||||||| | | ||||| |    
T  4576768 aaaagattaaataaagttaaaatatttttgtacaagttataagctgttttcataagctatattgaataacttatgaaaataagctgaacacaacttat-a 4576866  T
Q  211 aaaatgtcataaactattttcataagtt 238  Q
    || |||||||||||||||||||||||||    
T  4576867 aacatgtcataaactattttcataagtt 4576894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 186 - 245
Target Start/End: Original strand, 7941644 - 7941703
Alignment:
Q  186 aaaataagctgaaaatagcttatgaaaaatgtcataaactattttcataagttcttccaa 245  Q
    |||||||| ||||||||||||  ||| |||||||||| || ||||||||| |||||||||    
T  7941644 aaaataagttgaaaatagcttcggaacaatgtcataagctgttttcataaattcttccaa 7941703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 189 - 240
Target Start/End: Original strand, 15477606 - 15477657
Alignment:
Q  189 ataagctgaaaatagcttatgaaaaatgtcataaactattttcataagttct 240  Q
    |||||||||||| ||||| |||||| |||||||| || ||||||||||||||    
T  15477606 ataagctgaaaaaagcttttgaaaattgtcataagctgttttcataagttct 15477657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 186 - 245
Target Start/End: Original strand, 37473441 - 37473500
Alignment:
Q  186 aaaataagctgaaaatagcttatgaaaaatgtcataaactattttcataagttcttccaa 245  Q
    ||||||||||| ||| |||||||||||||||||||||  | |||||| ||||||| ||||    
T  37473441 aaaataagctggaaaaagcttatgaaaaatgtcataagttgttttcaaaagttctcccaa 37473500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 186 - 245
Target Start/End: Complemental strand, 40977435 - 40977376
Alignment:
Q  186 aaaataagctgaaaatagcttatgaaaaatgtcataaactattttcataagttcttccaa 245  Q
    ||||||||||| ||| ||||| |||||| ||||||||| | |||||||||||||| ||||    
T  40977435 aaaataagctggaaaaagcttttgaaaattgtcataaattgttttcataagttctcccaa 40977376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 186 - 245
Target Start/End: Complemental strand, 47498871 - 47498812
Alignment:
Q  186 aaaataagctgaaaatagcttatgaaaaatgtcataaactattttcataagttcttccaa 245  Q
    |||||||||| |||| | |||||||| ||| |||||| ||||||||||||||||| ||||    
T  47498871 aaaataagctaaaaacaacttatgaacaatatcataagctattttcataagttctcccaa 47498812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 186 - 245
Target Start/End: Original strand, 49938785 - 49938844
Alignment:
Q  186 aaaataagctgaaaatagcttatgaaaaatgtcataaactattttcataagttcttccaa 245  Q
    |||||||| |||||| ||||| |||||| |||||||| || |||||||||||||| ||||    
T  49938785 aaaataagttgaaaaaagcttttgaaaattgtcataagctgttttcataagttctcccaa 49938844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 186 - 245
Target Start/End: Complemental strand, 51695527 - 51695468
Alignment:
Q  186 aaaataagctgaaaatagcttatgaaaaatgtcataaactattttcataagttcttccaa 245  Q
    |||||||||||||||||||||||||| ||||| ||||  | |||  ||||||||||||||    
T  51695527 aaaataagctgaaaatagcttatgaacaatgtgataagttgtttatataagttcttccaa 51695468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 111 - 245
Target Start/End: Original strand, 473127 - 473260
Alignment:
Q  111 aaaagataaaatacagttaaattattcttgtttaagatataatcagtttttataagttatattggtcatccgatcaaaataagctgaaaatagcttatga 210  Q
    ||||| ||||||| ||||||||| || | || || | |||||   ||||||||||||| ||||||  | |  || |||||||| |||||| |||||||||    
T  473127 aaaaggtaaaataaagttaaattgttttcgtgtatgctataagttgtttttataagttctattggagaacttatgaaaataagttgaaaaaagcttatga 473226  T
Q  211 aaaatgtcataaactattttcataagttcttccaa 245  Q
    ||| ||| |||| || |||||||||||||| ||||    
T  473227 aaattgt-ataagcttttttcataagttctcccaa 473260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 86 - 136
Target Start/End: Original strand, 26184689 - 26184739
Alignment:
Q  86 cttatgtataaactatttctatagtaaaagataaaatacagttaaattatt 136  Q
    |||||||||||||||||||||||  ||||| ||||||| ||| ||||||||    
T  26184689 cttatgtataaactatttctataagaaaaggtaaaataaagtcaaattatt 26184739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 72 - 134
Target Start/End: Complemental strand, 27146394 - 27146332
Alignment:
Q  72 tatcattataagcgcttatgtataaactatttctatagtaaaagataaaatacagttaaatta 134  Q
    |||||| ||||||| ||||||||||  |||||||| || ||||||||||||| | ||||||||    
T  27146394 tatcatgataagcgtttatgtataaggtatttctacagcaaaagataaaataaatttaaatta 27146332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 27820228 - 27820175
Alignment:
Q  186 aaaataagctgaaaatagcttatgaaaaatgtcataaactattttcataagttct 240  Q
    |||||||||||||||||||||||||| ||||| |||| || ||||||||| ||||    
T  27820228 aaaataagctgaaaatagcttatgaacaatgtaataagct-ttttcataaattct 27820175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 68 - 166
Target Start/End: Original strand, 33186186 - 33186284
Alignment:
Q  68 tgcttatcattataagcgcttatgtataaactatttctatagtaaaagataaaatacagttaaattattcttgtttaagatataatcagtttttataag 166  Q
    ||||||| || |||| |||||||| |||| || ||||||||| ||| ||||||| | ||||||||| ||||||| || | |||||   |||||||||||    
T  33186186 tgcttattatgataaccgcttatgcataagctctttctatagcaaaggataaaagaaagttaaatttttcttgtatatgctataagttgtttttataag 33186284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 186 - 284
Target Start/End: Complemental strand, 36514708 - 36514611
Alignment:
Q  186 aaaataagctgaaaatagcttatgaaaaatgtcataaactattttcataagttcttccaacccagtctcataatgcttatgtccgtagataaactcaaa 284  Q
    |||| |||||||||| ||||| | || ||||||||||  |||||||||||||||| || |  |||||||| ||  |||||| | |||||||||||||||    
T  36514708 aaaaaaagctgaaaacagcttctaaacaatgtcataagttattttcataagttctcccta-acagtctcaaaaaacttatggcagtagataaactcaaa 36514611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 112 - 238
Target Start/End: Complemental strand, 37631665 - 37631539
Alignment:
Q  112 aaagataaaatacagttaaattattcttgtttaagatataatcagtttttataagttatattggtcatccgatcaaaataagctgaaaatagcttatgaa 211  Q
    |||||||||||  || |||||| || |||| || ||||| | | |||||| |||| ||||||||  | |  || ||||||||||||||| ||||| ||||    
T  37631665 aaagataaaatgaagctaaattgtttttgtgtatgatattagctgtttttgtaagctatattggagaacttatgaaaataagctgaaaaaagcttgtgaa 37631566  T
Q  212 aaatgtcataaactattttcataagtt 238  Q
    || ||||| || || ||||||||||||    
T  37631565 aattgtcagaagctgttttcataagtt 37631539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 69 - 123
Target Start/End: Complemental strand, 38116334 - 38116281
Alignment:
Q  69 gcttatcattataagcgcttatgtataaactatttctatagtaaaagataaaata 123  Q
    ||||||||| |||||||||||||||||| ||||||| ||||  ||||||||||||    
T  38116334 gcttatcatgataagcgcttatgtataagctatttcaatag-caaagataaaata 38116281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 90 - 152
Target Start/End: Original strand, 38578469 - 38578531
Alignment:
Q  90 tgtataaactatttctatagtaaaagataaaatacagttaaattattcttgtttaagatataa 152  Q
    ||||||| |||||||||||  ||||||||| ||| |||||||||||| |||| |||| |||||    
T  38578469 tgtataagctatttctataacaaaagataacataaagttaaattatttttgtataagctataa 38578531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 98 - 136
Target Start/End: Original strand, 44251368 - 44251406
Alignment:
Q  98 ctatttctatagtaaaagataaaatacagttaaattatt 136  Q
    ||||||||||| |||||||||||||| ||||||||||||    
T  44251368 ctatttctataataaaagataaaataaagttaaattatt 44251406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 122
Target Start/End: Original strand, 870967 - 871019
Alignment:
Q  69 gcttatcattataagcgcttatgtataaactatttctatagtaaaagataaaat 122  Q
    ||||||||| ||||| ||||||||||||||||||| ||||  ||||||||||||    
T  870967 gcttatcat-ataagtgcttatgtataaactatttttataacaaaagataaaat 871019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 133
Target Start/End: Original strand, 15477530 - 15477563
Alignment:
Q  100 atttctatagtaaaagataaaatacagttaaatt 133  Q
    |||||||||||||||||||||||| |||||||||    
T  15477530 atttctatagtaaaagataaaataaagttaaatt 15477563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 68 - 136
Target Start/End: Complemental strand, 4256192 - 4256124
Alignment:
Q  68 tgcttatcattataagcgcttatgtataaactatttctatagtaaaagataaaatacagttaaattatt 136  Q
    |||||||||| ||| | | |||||||||| ||||||||| |  |||||||| |||| ||||||||||||    
T  4256192 tgcttatcatgatacgtgtttatgtataagctatttctacaacaaaagatacaataaagttaaattatt 4256124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 85 - 133
Target Start/End: Original strand, 4549803 - 4549851
Alignment:
Q  85 gcttatgtataaactatttctatagtaaaagataaaatacagttaaatt 133  Q
    ||||||||| || |||||||||||  ||||||||||||| |||||||||    
T  4549803 gcttatgtacaagctatttctataacaaaagataaaataaagttaaatt 4549851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 186 - 218
Target Start/End: Complemental strand, 27820369 - 27820337
Alignment:
Q  186 aaaataagctgaaaatagcttatgaaaaatgtc 218  Q
    |||||||||||||||||||||||||| ||||||    
T  27820369 aaaataagctgaaaatagcttatgaacaatgtc 27820337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 79 - 127
Target Start/End: Complemental strand, 33527286 - 33527238
Alignment:
Q  79 ataagcgcttatgtataaactatttctatagtaaaagataaaatacagt 127  Q
    ||||||||||||| |||| ||||||||| |  |||||||||||||||||    
T  33527286 ataagcgcttatgaataagctatttctaaaacaaaagataaaatacagt 33527238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 78 - 146
Target Start/End: Complemental strand, 46499994 - 46499926
Alignment:
Q  78 tataagcgcttatgtataaactatttctatagtaaaagataaaatacagttaaattattcttgtttaag 146  Q
    |||||| |||||| ||||| |||||||||||  ||||||||||||| ||| ||||| || || ||||||    
T  46499994 tataagtgcttatctataagctatttctataagaaaagataaaataaagtcaaattgtttttatttaag 46499926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 188 - 245
Target Start/End: Complemental strand, 49939981 - 49939924
Alignment:
Q  188 aataagctgaaaatagcttatgaaaaatgtcataaactattttcataagttcttccaa 245  Q
    ||||||||||||| |||||||||| |||||||||| || |||||||||||||||||||    
T  49939981 aataagctgaaaacagcttatgaacaatgtcataagctcttttcataagttcttccaa 49939924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 74 - 285
Target Start/End: Original strand, 1706548 - 1706758
Alignment:
Q  74 tcattataagcgcttatgtataaactatttctatagtaaaagataaaatacagttaaattattcttgtttaagatataatcagtttttataagttatatt 173  Q
    |||| ||||| ||||||||| || |||||| ||||| ||||| |||||||  ||| |||| || | ||  ||| ||||| | ||||| ||||  ||| ||    
T  1706548 tcatgataagtgcttatgtagaagctatttttatagaaaaagttaaaataatgttcaattgttttcgtagaagctataagctgttttcataaactatctt 1706647  T
Q  174 ggtcatccgatcaaaataagctgaaaatagcttatgaaaaatgtcataaactattttcataagttcttccaacccagtctcataatgcttatgtccgtag 273  Q
    || || |  || |||||||| || |||||||||||||| |||| ||||| || ||||||||| ||||  ||| || |||||| ||  |||||||| ||||    
T  1706648 ggacagcttatgaaaataagttggaaatagcttatgaacaatgccataagctgttttcataatttctctcaaacc-gtctcacaaaacttatgtcagtag 1706746  T
Q  274 ataaactcaaaa 285  Q
    ||||||||||||    
T  1706747 ataaactcaaaa 1706758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 186 - 245
Target Start/End: Complemental strand, 13126608 - 13126549
Alignment:
Q  186 aaaataagctgaaaatagcttatgaaaaatgtcataaactattttcataagttcttccaa 245  Q
    ||||||||||||||| ||||||||| ||||||||||| || |||| ||||||||||||||    
T  13126608 aaaataagctgaaaaaagcttatgataaatgtcataagctgtttttataagttcttccaa 13126549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 60 - 133
Target Start/End: Original strand, 3155515 - 3155588
Alignment:
Q  60 agtacaaatgcttatcattataagcgcttatgtataaactatttctatagtaaaagataaaatacagttaaatt 133  Q
    |||||||  ||||||||| ||||||   ||||||||| |||||||||||| ||||||||||||| |||||||||    
T  3155515 agtacaagcgcttatcatgataagcatgtatgtataagctatttctatagcaaaagataaaataaagttaaatt 3155588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 23503480 - 23503552
Alignment:
Q  69 gcttatcattataagcgcttatgtataaactatttctatagtaaaagataaaatacagttaaattattcttgt 141  Q
    ||||||||| ||||| |||||||||||| ||| |||||||  |||| |||||||| |||||||||||| ||||    
T  23503480 gcttatcatgataagtgcttatgtataatctaattctataacaaaatataaaataaagttaaattatttttgt 23503552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 68 - 131
Target Start/End: Original strand, 11389446 - 11389509
Alignment:
Q  68 tgcttatcattataagcgcttatgtataaactatttctatagtaaaagataaaatacagttaaa 131  Q
    |||||||||| ||||| ||||||||||||| ||||||||||  |||||||||| || |||||||    
T  11389446 tgcttatcatgataagtgcttatgtataaattatttctataaaaaaagataaagtaaagttaaa 11389509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 186 - 245
Target Start/End: Original strand, 21523596 - 21523654
Alignment:
Q  186 aaaataagctgaaaatagcttatgaaaaatgtcataaactattttcataagttcttccaa 245  Q
    ||||||||||||||| |||||||||||||||||||||  | ||||||||| |||||||||    
T  21523596 aaaataagctgaaaa-agcttatgaaaaatgtcataagttgttttcataaattcttccaa 21523654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 186 - 245
Target Start/End: Complemental strand, 25904255 - 25904196
Alignment:
Q  186 aaaataagctgaaaatagcttatgaaaaatgtcataaactattttcataagttcttccaa 245  Q
    ||||||||||||||| ||||||||||||||| ||||| || |||||||||| ||| ||||    
T  25904255 aaaataagctgaaaaaagcttatgaaaaatggcataagctgttttcataagctctcccaa 25904196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 93 - 232
Target Start/End: Complemental strand, 55414545 - 55414406
Alignment:
Q  93 ataaactatttctatagtaaaagataaaatacagttaaattattcttgtttaagatataatcagtttttataagttatattggtcatccgatcaaaataa 192  Q
    |||| |||||||||| | ||||||||||||| |||||| || || |||  || | |||||   ||||| ||||||||| ||||  | |  || |||||||    
T  55414545 ataagctatttctattggaaaagataaaataaagttaatttttttttgcatatgctataaattgttttcataagttatcttggagaacttatgaaaataa 55414446  T
Q  193 gctgaaaatagcttatgaaaaatgtcataaactattttca 232  Q
    | |||||| ||||||||||||||||||||| || ||||||    
T  55414445 gttgaaaaaagcttatgaaaaatgtcataagctgttttca 55414406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 79 - 165
Target Start/End: Original strand, 7601690 - 7601776
Alignment:
Q  79 ataagcgcttatgtataaactatttctatagtaaaagataaaatacagttaaattattcttgtttaagatataatcagtttttataa 165  Q
    |||||||||||||||||| ||||| |||||| ||| ||||||||| ||||||||| || |||| || | ||| |  |||||||||||    
T  7601690 ataagcgcttatgtataagctattcctatagcaaaggataaaataaagttaaattgtttttgtatatgttatgagtagtttttataa 7601776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 17822897 - 17822843
Alignment:
Q  186 aaaataagctgaaaatagcttatgaaaaatgtcataaactattttcataagttct 240  Q
    |||||||||| |||| ||||||||||||||||||||| || |||||||| |||||    
T  17822897 aaaataagctaaaaaaagcttatgaaaaatgtcataagctgttttcatatgttct 17822843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 71 - 133
Target Start/End: Complemental strand, 26520376 - 26520314
Alignment:
Q  71 ttatcattataagcgcttatgtataaactatttctatagtaaaagataaaatacagttaaatt 133  Q
    ||||||| |||||| |||||||||||||| ||||||||  ||||||| ||||| |||||||||    
T  26520376 ttatcatgataagcacttatgtataaactgtttctataacaaaagatgaaataaagttaaatt 26520314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 186 - 284
Target Start/End: Original strand, 41336798 - 41336895
Alignment:
Q  186 aaaataagctgaaaatagcttatgaaaaatgtcataaactattttcataagttcttccaacccagtctcataatgcttatgtccgtagataaactcaaa 284  Q
    |||||||| |||||| |||||||||||| |||||||| || ||||| ||||||||||| | | | ||||| ||  |||||||  |||||||||||||||    
T  41336798 aaaataagttgaaaaaagcttatgaaaactgtcataagctgttttcttaagttcttcctaacta-tctcacaaaacttatgtgagtagataaactcaaa 41336895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 69 - 123
Target Start/End: Complemental strand, 49004119 - 49004065
Alignment:
Q  69 gcttatcattataagcgcttatgtataaactatttctatagtaaaagataaaata 123  Q
    |||||| || |||||||||||||||||| | |||||||||| |||||||||||||    
T  49004119 gcttataatgataagcgcttatgtataagcaatttctatagcaaaagataaaata 49004065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 50662770 - 50662716
Alignment:
Q  186 aaaataagctgaaaatagcttatgaaaaatgtcataaactattttcataagttct 240  Q
    |||||||| |||||| |||||||||||| |||||| |||| ||||||||||||||    
T  50662770 aaaataagttgaaaaaagcttatgaaaattgtcattaactgttttcataagttct 50662716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 68 - 133
Target Start/End: Original strand, 6364069 - 6364134
Alignment:
Q  68 tgcttatcattataagcgcttatgtataaactatttctatagtaaaagataaaatacagttaaatt 133  Q
    |||||||||  |||||| ||||||||||| |||||||||||  ||||||||||||| ||| |||||    
T  6364069 tgcttatcaagataagcacttatgtataagctatttctataacaaaagataaaataaagtgaaatt 6364134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 91 - 136
Target Start/End: Original strand, 30770826 - 30770871
Alignment:
Q  91 gtataaactatttctatagtaaaagataaaatacagttaaattatt 136  Q
    ||||||||||||| |||| |||||||||||||| ||||||||||||    
T  30770826 gtataaactatttttataataaaagataaaataaagttaaattatt 30770871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 86 - 138
Target Start/End: Complemental strand, 40533004 - 40532952
Alignment:
Q  86 cttatgtataaactatttctatagtaaaagataaaatacagttaaattattct 138  Q
    |||||| ||| | |||||||| |||||||||||||||| ||||||||||||||    
T  40533004 cttatgaatacattatttctaaagtaaaagataaaataaagttaaattattct 40532952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 187 - 238
Target Start/End: Complemental strand, 43886162 - 43886112
Alignment:
Q  187 aaataagctgaaaatagcttatgaaaaatgtcataaactattttcataagtt 238  Q
    ||||||||||||||||||||||| |||||| ||||| || ||||||||||||    
T  43886162 aaataagctgaaaatagcttatg-aaaatgccataagctgttttcataagtt 43886112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 24169301 - 24169355
Alignment:
Q  186 aaaataagctgaaaatagcttatgaaaaatgtcataaactattttcataagttct 240  Q
    |||||||| |||||| | ||||||||||||||||||| ||||||| | |||||||    
T  24169301 aaaataagttgaaaaaatcttatgaaaaatgtcataagctatttttaaaagttct 24169355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 93 - 123
Target Start/End: Original strand, 27405996 - 27406026
Alignment:
Q  93 ataaactatttctatagtaaaagataaaata 123  Q
    |||||||||||||||||||||||||||||||    
T  27405996 ataaactatttctatagtaaaagataaaata 27406026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 85 - 131
Target Start/End: Complemental strand, 30338725 - 30338679
Alignment:
Q  85 gcttatgtataaactatttctatagtaaaagataaaatacagttaaa 131  Q
    ||||||||||||||||||||||||  |||||||| |||| |||||||    
T  30338725 gcttatgtataaactatttctataacaaaagatagaataaagttaaa 30338679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 50681121 - 50681067
Alignment:
Q  186 aaaataagctgaaaatagcttatgaaaaatgtcataaactattttcataagttct 240  Q
    |||||||  |||||| |||||||||||| |||||| |||| ||||||||||||||    
T  50681121 aaaataaattgaaaaaagcttatgaaaattgtcattaactgttttcataagttct 50681067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 186 - 284
Target Start/End: Original strand, 54426081 - 54426178
Alignment:
Q  186 aaaataagctgaaaatagcttatgaaaaatgtcataaactattttcataagttcttccaacccagtctcataatgcttatgtccgtagataaactcaaa 284  Q
    |||||||  |||||| |||||||||||| |||||||| || ||||| |||||||| ||||  |||||||| ||  |||||| | |||||||| ||||||    
T  54426081 aaaataacttgaaaaaagcttatgaaaattgtcataagctgttttcctaagttctcccaa-gcagtctcacaaaacttatgccagtagataagctcaaa 54426178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 138
Target Start/End: Original strand, 9680601 - 9680654
Alignment:
Q  85 gcttatgtataaactatttctatagtaaaagataaaatacagttaaattattct 138  Q
    |||||||||||| ||||||| ||| |||||||||||||| ||| ||||| ||||    
T  9680601 gcttatgtataagctatttcgataataaaagataaaataaagtcaaattgttct 9680654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 70 - 175
Target Start/End: Original strand, 17883990 - 17884095
Alignment:
Q  70 cttatcattataagcgcttatgtataaactatttctatagtaaaagataaaatacagttaaattattcttgtttaagatataatcagtttttataagtta 169  Q
    ||||||||  |||| ||| |||| ||| |||||||||||  ||||||||||||| ||||||||| || |||| |||| ||| |   ||||| ||||| ||    
T  17883990 cttatcatggtaagtgctcatgtgtaagctatttctataacaaaagataaaataaagttaaattgtttttgtataagttatcagttgttttcataagcta 17884089  T
Q  170 tattgg 175  Q
    ||||||    
T  17884090 tattgg 17884095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 123
Target Start/End: Original strand, 18630610 - 18630655
Alignment:
Q  78 tataagcgcttatgtataaactatttctatagtaaaagataaaata 123  Q
    |||||||||||||| |||||||||||| |||  |||||||||||||    
T  18630610 tataagcgcttatgcataaactatttcaataacaaaagataaaata 18630655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 240
Target Start/End: Original strand, 25571295 - 25571351
Alignment:
Q  183 atcaaaataagctgaaaatagcttatgaaaaatgtcataaactattttcataagttct 240  Q
    |||||||||||||||||| |||||||| || || ||||||||| ||| ||||||||||    
T  25571295 atcaaaataagctgaaaacagcttatg-aacatatcataaactgtttccataagttct 25571351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 48719423 - 48719371
Alignment:
Q  186 aaaataagctgaaaatagcttatgaaaaatgtcataaactattttcataagttc 239  Q
    ||||||||||||||| |||||| ||| | |||||||||| ||||||||||||||    
T  48719423 aaaataagctgaaaacagcttacgaaca-tgtcataaaccattttcataagttc 48719371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 78 - 134
Target Start/End: Original strand, 4471101 - 4471157
Alignment:
Q  78 tataagcgcttatgtataaactatttctatagtaaaagataaaatacagttaaatta 134  Q
    |||||| ||||||| ||||||||||| ||||  ||||||||||||| || |||||||    
T  4471101 tataagtgcttatgcataaactatttttataacaaaagataaaataaaggtaaatta 4471157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 17223067 - 17223020
Alignment:
Q  187 aaataagctgaaaatagcttatgaaaaatgtcataaactattttcataa 235  Q
    ||||||| |||||| |||||||||| | |||||||||||||||||||||    
T  17223067 aaataagttgaaaacagcttatgaaca-tgtcataaactattttcataa 17223020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 87 - 123
Target Start/End: Original strand, 21193937 - 21193973
Alignment:
Q  87 ttatgtataaactatttctatagtaaaagataaaata 123  Q
    |||||||||| |||||| |||||||||||||||||||    
T  21193937 ttatgtataagctatttttatagtaaaagataaaata 21193973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 87 - 131
Target Start/End: Complemental strand, 21683610 - 21683566
Alignment:
Q  87 ttatgtataaactatttctatagtaaaagataaaatacagttaaa 131  Q
    ||||||||||||||||||||||  ||||||||| ||| |||||||    
T  21683610 ttatgtataaactatttctataacaaaagataagataaagttaaa 21683566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 86 - 170
Target Start/End: Original strand, 25885797 - 25885881
Alignment:
Q  86 cttatgtataaactatttctatagtaaaagataaaatacagttaaattattcttgtttaagatataatcagtttttataagttat 170  Q
    ||||||||| | || ||||||||| ||||||||||||| ||||||||| || | || |||| |||||   ||||| |||||||||    
T  25885797 cttatgtattagctctttctatagcaaaagataaaataaagttaaattgttttcgtgtaagctataagttgttttcataagttat 25885881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 85 - 133
Target Start/End: Original strand, 44138496 - 44138544
Alignment:
Q  85 gcttatgtataaactatttctatagtaaaagataaaatacagttaaatt 133  Q
    |||||||||||| || ||||||||| | ||||||||||| |||||||||    
T  44138496 gcttatgtataagctgtttctatagcagaagataaaataaagttaaatt 44138544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 186 - 238
Target Start/End: Original strand, 44138597 - 44138649
Alignment:
Q  186 aaaataagctgaaaatagcttatgaaaaatgtcataaactattttcataagtt 238  Q
    |||||||||||||||| |||| |||| ||||||||||  ||| ||||||||||    
T  44138597 aaaataagctgaaaattgcttgtgaataatgtcataagttatcttcataagtt 44138649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 86 - 122
Target Start/End: Complemental strand, 45128442 - 45128406
Alignment:
Q  86 cttatgtataaactatttctatagtaaaagataaaat 122  Q
    |||||||||||||||||||||||  ||||||||||||    
T  45128442 cttatgtataaactatttctataacaaaagataaaat 45128406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 157 - 245
Target Start/End: Complemental strand, 46588134 - 46588046
Alignment:
Q  157 tttttataagttatattggtcatccgatcaaaataagctgaaaatagcttatgaaaaatgtcataaactattttcataagttcttccaa 245  Q
    |||||||||||||||||||  | |  || |||||||| || |||  ||||||||||| ||||||||  ||||||| |||||||| ||||    
T  46588134 tttttataagttatattggagaacttatgaaaataagttggaaaaggcttatgaaaattgtcataagttattttcgtaagttctaccaa 46588046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 157 - 245
Target Start/End: Complemental strand, 46592270 - 46592182
Alignment:
Q  157 tttttataagttatattggtcatccgatcaaaataagctgaaaatagcttatgaaaaatgtcataaactattttcataagttcttccaa 245  Q
    |||||||||||||||||||  | |  || |||||||| || |||  ||||||||||| ||||||||  ||||||  |||||||||||||    
T  46592270 tttttataagttatattggagaacttatgaaaataagttggaaaaggcttatgaaaattgtcataagttatttttgtaagttcttccaa 46592182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 78 - 122
Target Start/End: Original strand, 47970248 - 47970292
Alignment:
Q  78 tataagcgcttatgtataaactatttctatagtaaaagataaaat 122  Q
    |||||| |||||||||||| |||||||||||  ||||||||||||    
T  47970248 tataagtgcttatgtataagctatttctataacaaaagataaaat 47970292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 69 - 133
Target Start/End: Complemental strand, 50662881 - 50662817
Alignment:
Q  69 gcttatcattataagcgcttatgtataaactatttctatagtaaaagataaaatacagttaaatt 133  Q
    ||||||||| || |||| |||||||||| |||||| ||||| | |||||||||||  ||||||||    
T  50662881 gcttatcatgatgagcgtttatgtataagctatttttatagcataagataaaataatgttaaatt 50662817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 98 - 174
Target Start/End: Complemental strand, 54069537 - 54069461
Alignment:
Q  98 ctatttctatagtaaaagataaaatacagttaaattattcttgtttaagatataatcagtttttataagttatattg 174  Q
    |||||| ||||  |||||||||||||  |||||||| || |||| || | ||||||  |||||||||||||||||||    
T  54069537 ctatttttatatcaaaagataaaataatgttaaattgtttttgtatatgctataatttgtttttataagttatattg 54069461  T

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Target: chr7 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 105 - 240
Target Start/End: Original strand, 20526403 - 20526538
Alignment:
Q  105 tatagtaaaagataaaatacagttaaattattcttgtttaagatataatcagtttttataagttatattggtcatccgatcaaaataagctgaaaatagc 204  Q
    ||||| ||||||||||||| |||||||||||  ||||  | | ||||| | ||||| ||||| ||| ||||  | |  || |||||||||| |||| |||    
T  20526403 tatagcaaaagataaaataaagttaaattatgtttgtacatgctataagctgttttcataagctattttggagaactaatgaaaataagctaaaaacagc 20526502  T
Q  205 ttatgaaaaatgtcataaactattttcataagttct 240  Q
    ||| ||||||||| ||||||| ||||||||||||||    
T  20526503 ttacgaaaaatgtgataaactgttttcataagttct 20526538  T

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Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 186 - 284
Target Start/End: Original strand, 34035955 - 34036052
Alignment:
Q  186 aaaataagctgaaaatagcttatgaaaaatgtcataaactattttcataagttcttccaacccagtctcataatgcttatgtccgtagataaactcaaa 284  Q
    |||||||| |||||| | |||||||| ||||||||||  |||||||||||||||||||||   ||||||| ||| | |||||| |||||||| ||||||    
T  34035955 aaaataagttgaaaacaacttatgaacaatgtcataagttattttcataagttcttccaa-gtagtctcacaatacatatgtcagtagataagctcaaa 34036052  T

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Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 189 - 268
Target Start/End: Original strand, 48131594 - 48131672
Alignment:
Q  189 ataagctgaaaatagcttatgaaaaatgtcataaactattttcataagttcttccaacccagtctcat-aatgcttatgtc 268  Q
    ||||||||||||||| ||||||||| ||||||||  ||||||| |||||||||||||  ||||||||| ||||||||||||    
T  48131594 ataagctgaaaatagtttatgaaaa-tgtcataacttattttcgtaagttcttccaa-acagtctcataaatgcttatgtc 48131672  T

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Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 189 - 284
Target Start/End: Original strand, 48470085 - 48470179
Alignment:
Q  189 ataagctgaaaatagcttatgaaaaatgtcataaactattttcataagttcttccaacccagtctcataatgcttatgtccgtagataaactcaaa 284  Q
    ||||||| |||| ||||||||||||||| ||||| || |||||||||||||| ||||  || ||||||||  ||||||||  ||||||| ||||||    
T  48470085 ataagctcaaaaaagcttatgaaaaatgccataagctgttttcataagttctcccaa-acaatctcataaaacttatgtctatagataagctcaaa 48470179  T

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Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 78 - 132
Target Start/End: Original strand, 15328536 - 15328590
Alignment:
Q  78 tataagcgcttatgtataaactatttctatagtaaaagataaaatacagttaaat 132  Q
    |||||| ||||||| |||| ||||||||||| |||||||||||||| ||||||||    
T  15328536 tataagtgcttatgcataatctatttctataataaaagataaaataaagttaaat 15328590  T

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Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 190 - 240
Target Start/End: Complemental strand, 33601438 - 33601388
Alignment:
Q  190 taagctgaaaatagcttatgaaaaatgtcataaactattttcataagttct 240  Q
    ||||||||||| |||||||||||| |||||||| || ||||||||||||||    
T  33601438 taagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttct 33601388  T

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Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 71 - 129
Target Start/End: Complemental strand, 37832286 - 37832228
Alignment:
Q  71 ttatcattataagcgcttatgtataaactatttctatagtaaaagataaaatacagtta 129  Q
    ||||||| ||||| |||| |||||||||||||||||||| |||| |||||||| |||||    
T  37832286 ttatcatgataagtgcttgtgtataaactatttctatagcaaaatataaaataaagtta 37832228  T

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Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 188 - 245
Target Start/End: Complemental strand, 37832171 - 37832114
Alignment:
Q  188 aataagctgaaaatagcttatgaaaaatgtcataaactattttcataagttcttccaa 245  Q
    |||||||||||||||||||||||| |||||  |||||| |||  ||||||||||||||    
T  37832171 aataagctgaaaatagcttatgaacaatgttgtaaactgtttatataagttcttccaa 37832114  T

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Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 186 - 245
Target Start/End: Complemental strand, 3308284 - 3308224
Alignment:
Q  186 aaaataagctgaaaatagcttatga-aaaatgtcataaactattttcataagttcttccaa 245  Q
    ||||||||||||||| ||||||||| |||||| ||||| ||||||||| ||||||| ||||    
T  3308284 aaaataagctgaaaaaagcttatgagaaaatggcataagctattttcaaaagttctcccaa 3308224  T

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Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 175
Target Start/End: Original strand, 33673009 - 33673104
Alignment:
Q  79 ataagcgcttatgtataaactatttctatagtaaaagataaaatacagttaaattattcttgtttaagatataatcagtttttataagttatattgg 175  Q
    |||||||||||||||||| ||| |||||||| ||| ||||||||| | |||||||||  |||| |||| ||||| | ||||  ||||| ||||||||    
T  33673009 ataagcgcttatgtataagctacttctatagcaaaggataaaata-acttaaattatatttgtataagctataagctgtttccataagctatattgg 33673104  T

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Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 186 - 245
Target Start/End: Original strand, 5947222 - 5947281
Alignment:
Q  186 aaaataagctgaaaatagcttatgaaaaatgtcataaactattttcataagttcttccaa 245  Q
    ||||||||||||||| ||||||||||||||| ||||| ||  ||||| ||||||| ||||    
T  5947222 aaaataagctgaaaagagcttatgaaaaatgccataagctggtttcaaaagttctaccaa 5947281  T

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Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 187 - 258
Target Start/End: Original strand, 5947280 - 5947350
Alignment:
Q  187 aaataagctgaaaatagcttatgaaaaatgtcataaactattttcataagttcttccaacccagtctcataa 258  Q
    |||||||||| ||| ||| ||||||||||||||||| ||  ||||| ||||||||||||  |||||||||||    
T  5947280 aaataagctgtaaaaagcatatgaaaaatgtcataagctggtttcaaaagttcttccaa-acagtctcataa 5947350  T

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Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 186 - 245
Target Start/End: Complemental strand, 38499945 - 38499886
Alignment:
Q  186 aaaataagctgaaaatagcttatgaaaaatgtcataaactattttcataagttcttccaa 245  Q
    ||||||||||| ||| ||||||||||||||||||||| || |||| | ||||||| ||||    
T  38499945 aaaataagctggaaaaagcttatgaaaaatgtcataagctgttttgaaaagttctcccaa 38499886  T

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Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 39967958 - 39968012
Alignment:
Q  186 aaaataagctgaaaatagcttatgaaaaatgtcataaactattttcataagttct 240  Q
    |||||||| |||||| |||||||||| |||| ||||| || ||||||||||||||    
T  39967958 aaaataagttgaaaacagcttatgaacaatgccataagctgttttcataagttct 39968012  T

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Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 98 - 136
Target Start/End: Complemental strand, 40689106 - 40689068
Alignment:
Q  98 ctatttctatagtaaaagataaaatacagttaaattatt 136  Q
    |||||||||||| ||||||||||||| ||||||||||||    
T  40689106 ctatttctatagcaaaagataaaataaagttaaattatt 40689068  T

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Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 79 - 136
Target Start/End: Original strand, 5269461 - 5269518
Alignment:
Q  79 ataagcgcttatgtataaactatttctatagtaaaagataaaatacagttaaattatt 136  Q
    ||||| |||||| |||||| ||||||| || |||||||||||||| ||| ||||||||    
T  5269461 ataagtgcttatatataaattatttctttaataaaagataaaataaagtcaaattatt 5269518  T

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Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 123
Target Start/End: Original strand, 25827322 - 25827367
Alignment:
Q  78 tataagcgcttatgtataaactatttctatagtaaaagataaaata 123  Q
    |||||||||||||| |||||||||||||| || ||| |||||||||    
T  25827322 tataagcgcttatgaataaactatttctacagcaaacgataaaata 25827367  T

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Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 283
Target Start/End: Complemental strand, 33602055 - 33601963
Alignment:
Q  190 taagctgaaaatagcttatgaaaaatgtcataaactattttcataagttcttccaacccagtctcataatgcttatgtccgtagataaactcaa 283  Q
    |||||||||||  ||||||||||| |||||||| || |||||||||||| ||| ||   ||||||||||  |||||| | |||||||| |||||    
T  33602055 taagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagtt-ttcgaaaagagtctcataaaacttatgccagtagataagctcaa 33601963  T

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Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 99 - 168
Target Start/End: Complemental strand, 34083644 - 34083575
Alignment:
Q  99 tatttctatagtaaaagataaaatacagttaaattattcttgtttaagatataatcagtttttataagtt 168  Q
    ||||||||||| ||||||||||||| ||||||||| ||  ||| |||| ||||| | ||||| |||||||    
T  34083644 tatttctatagcaaaagataaaataaagttaaattgtttgtgtataagctataagctgttttcataagtt 34083575  T

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Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 146
Target Start/End: Original strand, 42656436 - 42656513
Alignment:
Q  69 gcttatcattataagcgcttatgtataaactatttctatagtaaaagataaaatacagttaaattattcttgtttaag 146  Q
    ||||||||  |||||| ||||| ||||| |||||||||||  ||||||||||||| ||| |||| ||| |||| ||||    
T  42656436 gcttatcaaaataagcacttatatataagctatttctataacaaaagataaaataaagtcaaatcatttttgtataag 42656513  T

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Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 120
Target Start/End: Complemental strand, 44777129 - 44777080
Alignment:
Q  71 ttatcattataagcgcttatgtataaactatttctatagtaaaagataaa 120  Q
    ||||||| |||||| |||||| ||||||||||||||| | ||||||||||    
T  44777129 ttatcatgataagcacttatgcataaactatttctattgcaaaagataaa 44777080  T

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Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 214 - 242
Target Start/End: Original strand, 946793 - 946821
Alignment:
Q  214 atgtcataaactattttcataagttcttc 242  Q
    |||||||||||||||||||||||||||||    
T  946793 atgtcataaactattttcataagttcttc 946821  T

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Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 93 - 133
Target Start/End: Original strand, 45004711 - 45004751
Alignment:
Q  93 ataaactatttctatagtaaaagataaaatacagttaaatt 133  Q
    ||||||||||| ||||| ||||||||||||| |||||||||    
T  45004711 ataaactatttttatagcaaaagataaaataaagttaaatt 45004751  T

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Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 195 - 266
Target Start/End: Original strand, 48131384 - 48131454
Alignment:
Q  195 tgaaaatagcttatgaaaaatgtcataaactattttcataagttcttccaacccagtctcataa-tgcttatg 266  Q
    ||||||||| ||||||||| | ||||||  |||||||||||||||||||||  ||||||||||| ||||||||    
T  48131384 tgaaaatagattatgaaaatt-tcataacttattttcataagttcttccaa-acagtctcataagtgcttatg 48131454  T

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Target: scaffold0024 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 70 - 133
Target Start/End: Complemental strand, 21426 - 21363
Alignment:
Q  70 cttatcattataagcgcttatgtataaactatttctatagtaaaagataaaatacagttaaatt 133  Q
    |||| ||| |||||| ||||||||||| |||||| ||||| ||||||||||||| |||||||||    
T  21426 cttaccatgataagcacttatgtataagctatttttataggaaaagataaaataaagttaaatt 21363  T

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Target: scaffold0590 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 78 - 138
Target Start/End: Complemental strand, 1214 - 1154
Alignment:
Q  78 tataagcgcttatgtataaactatttctatagtaaaagataaaatacagttaaattattct 138  Q
    |||||| |||||||||||| |||||||||||  ||||||||||||| ||| ||| ||||||    
T  1214 tataagtgcttatgtataagctatttctataacaaaagataaaataaagtcaaactattct 1154  T

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Target: scaffold0275 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 78 - 138
Target Start/End: Original strand, 2761 - 2821
Alignment:
Q  78 tataagcgcttatgtataaactatttctatagtaaaagataaaatacagttaaattattct 138  Q
    |||||| |||||||||||| |||||||||||  ||||||||||||| ||| ||| ||||||    
T  2761 tataagtgcttatgtataagctatttctataacaaaagataaaataaagtcaaactattct 2821  T

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Target: scaffold0528 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0528
Description:

Target: scaffold0528; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 197 - 238
Target Start/End: Complemental strand, 1003 - 962
Alignment:
Q  197 aaaatagcttatgaaaaatgtcataaactattttcataagtt 238  Q
    |||| ||||||||||||||||||||| ||||||| |||||||    
T  1003 aaaaaagcttatgaaaaatgtcataagctatttttataagtt 962  T

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