View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4948_high_12 (Length: 224)
Name: NF4948_high_12
Description: NF4948
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4948_high_12 |
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Alignment Details
Target: chr8 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 16 - 213
Target Start/End: Complemental strand, 29648839 - 29648642
Alignment:
| Q |
16 |
tcttcctctatggctgcaacattattgcatggagaaagactcgtataaactacagatttattttcgagatagttccgacaaaggaactaaagtacagtga |
115 |
Q |
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| T |
29648839 |
tcttcctctatggatgcaacattattgcatggagaaagactcgtataaactacagatttattttcgagatagttccgacaaaggaactaaagtacagtga |
29648740 |
T |
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| Q |
116 |
tgtattcttgatttgtacaatgtctatgactgctgtggttggagtcttgctttttcatttgactctactcacaaaagggtattcctatgcacaggttc |
213 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
29648739 |
tgtattcttgatttgtacaatgtctatgactgctgtggttggagtcttgctttttcatttgactctactcacaaaagggtattcctatgcacaagttc |
29648642 |
T |
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