View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4950_high_2 (Length: 472)
Name: NF4950_high_2
Description: NF4950
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4950_high_2 |
 |  |
|
Alignment Details
Target: chr6 (Bit Score: 361; Significance: 0; HSPs: 11)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 361; E-Value: 0
Query Start/End: Original strand, 17 - 457
Target Start/End: Complemental strand, 1915059 - 1914619
Alignment:
| Q |
17 |
tcaatgttgcagatccgaggacgcgaatattatagagacttgaatatattcatatttgtaggcatagccgtatagttactctgacattttatgctattaa |
116 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1915059 |
tcaatattgcagatccgaggacgcgaatattatagagacttgaatatattcatatttgtaggcatagccgtatagttactctgacattttatgctattaa |
1914960 |
T |
 |
| Q |
117 |
cgataatgtaagtgtgtttacagattcatccgttttatttttagtgtactttatcaaattaaatgaatataatctatttttgtctnnnnnnnntcgaact |
216 |
Q |
| |
|
|||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| |
|
|
| T |
1914959 |
cgatgatgtaagtgtgtttacagattcacccgttttatttttagtgtactttatcaaattaaatgaatatcatctatttttgtctaaaaaaaatcgaact |
1914860 |
T |
 |
| Q |
217 |
tagtattttcatatataccttgttttggctaaatgtannnnnnnngtgcatgtatcttacgattcatatgtttataaacattttcaatttgataaccatg |
316 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
1914859 |
tagtattttcatatataccttgtttttgctaaatgtattttttttgtgcatgtatcttacgattcatatgcttataaacattttcaatttgataaccatg |
1914760 |
T |
 |
| Q |
317 |
tttttaaacatttccatctattttcttttcaaaagtttctgctctatagctttgcaaaagaggtgcattctcagtagatggtgactgcaagctaccacca |
416 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1914759 |
tttttaaacatttccatctattttcttttcaaaagtttctgctctattgctttgcaaaagaggtgcattctcagtagatggtgactgcaagctaccacca |
1914660 |
T |
 |
| Q |
417 |
acatcttcctctatctcttctgttgctttgccccataatac |
457 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
1914659 |
acatcttcctctatctcttctgtagctttgccccataatac |
1914619 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 318 - 457
Target Start/End: Complemental strand, 1905210 - 1905074
Alignment:
| Q |
318 |
ttttaaacatttccatctattttcttttcaaaagtttctgctctatagctttgcaaaagaggtgcattctcagtagatggtgactgcaagctaccaccaa |
417 |
Q |
| |
|
|||||||||||||||| | |||| ||||||||||||| | |||| |||||||||||||||||||||||||| |||||||||||| ||| || ||||| |
|
|
| T |
1905210 |
ttttaaacatttccatttgttttattttcaaaagtttgagttctagagctttgcaaaagaggtgcattctcattagatggtgactccaa---actaccaa |
1905114 |
T |
 |
| Q |
418 |
catcttcctctatctcttctgttgctttgccccataatac |
457 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
1905113 |
catcttcctctatctcttctgtagctttgccccataatac |
1905074 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 318 - 457
Target Start/End: Complemental strand, 1909443 - 1909307
Alignment:
| Q |
318 |
ttttaaacatttccatctattttcttttcaaaagtttctgctctatagctttgcaaaagaggtgcattctcagtagatggtgactgcaagctaccaccaa |
417 |
Q |
| |
|
|||||||||||||||| | |||| ||||||||||||| | |||| |||||||||||||||||||||||||| |||||||||||| ||| || ||||| |
|
|
| T |
1909443 |
ttttaaacatttccatttgttttattttcaaaagtttgagttctagagctttgcaaaagaggtgcattctcattagatggtgactccaa---actaccaa |
1909347 |
T |
 |
| Q |
418 |
catcttcctctatctcttctgttgctttgccccataatac |
457 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
1909346 |
catcttcctctatctcttctgtagctttgccccataatac |
1909307 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 303 - 456
Target Start/End: Complemental strand, 1899761 - 1899612
Alignment:
| Q |
303 |
atttgataaccatgtttttaaacatttccatctattttcttttcaaaagtttctgctctatagctttgcaaaagaggtgcattctcagtagatggtgact |
402 |
Q |
| |
|
||||||||||||| |||| ||||| |||||| | |||| || |||||||| | | |||| |||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
1899761 |
atttgataaccatatttt-aaacagttccatttgttttattgtcaaaagtgtgagttctagagctttgcaaaagaggtgcattctcattagatggtgact |
1899663 |
T |
 |
| Q |
403 |
gcaagctaccaccaacatcttcctctatctcttctgttgctttgccccataata |
456 |
Q |
| |
|
||| || ||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
1899662 |
ccaa---actaccaacatcttcctctatctcttctgtagctttgccccataata |
1899612 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 318 - 457
Target Start/End: Complemental strand, 1893835 - 1893699
Alignment:
| Q |
318 |
ttttaaacatttccatctattttcttttcaaaagtttctgctctatagctttgcaaaagaggtgcattctcagtagatggtgactgcaagctaccaccaa |
417 |
Q |
| |
|
||||||| |||||||| | ||||||||||||| ||||| | |||||| ||||| ||||||||||||||||| |||||||||||| | ||| ||||| |
|
|
| T |
1893835 |
ttttaaatatttccatttgttttcttttcaaatgtttcagttctataactttgtaaaagaggtgcattctctatagatggtgactctaggct---accaa |
1893739 |
T |
 |
| Q |
418 |
catcttcctctatctcttctgttgctttgccccataatac |
457 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
1893738 |
catcttcctctatcttttctgttgctttgccccataatac |
1893699 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 307 - 451
Target Start/End: Complemental strand, 1881672 - 1881531
Alignment:
| Q |
307 |
gataaccatgtttttaaacatttccatctattttcttttcaaaagtttctgctctatagctttgcaaaagaggtgcattctcagtagatggtgactgcaa |
406 |
Q |
| |
|
||||||| | ||||||||||||||||| | |||| |||||||||||||| |||| |||||||||| ||||||||||| || ||||||||||||| | |
|
|
| T |
1881672 |
gataaccttatttttaaacatttccatttgttttgttttcaaaagtttcaattctacagctttgcaatagaggtgcattatctgtagatggtgactctga |
1881573 |
T |
 |
| Q |
407 |
gctaccaccaacatcttcctctatctcttctgttgctttgcccca |
451 |
Q |
| |
|
||| ||||||||||||||||||||||||| ||| ||||||||| |
|
|
| T |
1881572 |
gct---accaacatcttcctctatctcttctcttgatttgcccca |
1881531 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 307 - 451
Target Start/End: Complemental strand, 1888675 - 1888534
Alignment:
| Q |
307 |
gataaccatgtttttaaacatttccatctattttcttttcaaaagtttctgctctatagctttgcaaaagaggtgcattctcagtagatggtgactgcaa |
406 |
Q |
| |
|
||||||||| ||| |||||| |||||| | |||| |||||||||||||| |||| |||||||||| ||||||||||| || ||||||||||||| | |
|
|
| T |
1888675 |
gataaccatatttctaaacaattccatttgttttgttttcaaaagtttcaattctacagctttgcaatagaggtgcattatctgtagatggtgactctga |
1888576 |
T |
 |
| Q |
407 |
gctaccaccaacatcttcctctatctcttctgttgctttgcccca |
451 |
Q |
| |
|
||| ||||||||||||||||||||||||| ||| ||||||||| |
|
|
| T |
1888575 |
gct---accaacatcttcctctatctcttctcttgatttgcccca |
1888534 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 50 - 79
Target Start/End: Original strand, 3338087 - 3338116
Alignment:
| Q |
50 |
agagacttgaatatattcatatttgtaggc |
79 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
3338087 |
agagacttgaatatattcatatttgtaggc |
3338116 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 88 - 160
Target Start/End: Complemental strand, 14782950 - 14782875
Alignment:
| Q |
88 |
atagttactctgacattttatgctattaac---gataatgtaagtgtgtttacagattcatccgttttatttttag |
160 |
Q |
| |
|
|||| |||| || ||||||||||||||||| |||||||| ||| |||| |||||||||||| |||| ||||||| |
|
|
| T |
14782950 |
ataggtactttgccattttatgctattaacatggataatgtgagtttgttcacagattcatcctttttgtttttag |
14782875 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 50 - 83
Target Start/End: Original strand, 30813353 - 30813386
Alignment:
| Q |
50 |
agagacttgaatatattcatatttgtaggcatag |
83 |
Q |
| |
|
||||||||||||||| |||||||||||||||||| |
|
|
| T |
30813353 |
agagacttgaatatagtcatatttgtaggcatag |
30813386 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 51 - 83
Target Start/End: Complemental strand, 12481203 - 12481171
Alignment:
| Q |
51 |
gagacttgaatatattcatatttgtaggcatag |
83 |
Q |
| |
|
|||||||||||||| |||||||||||||||||| |
|
|
| T |
12481203 |
gagacttgaatatagtcatatttgtaggcatag |
12481171 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 36; Significance: 0.00000000004; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 19 - 82
Target Start/End: Complemental strand, 45425346 - 45425283
Alignment:
| Q |
19 |
aatgttgcagatccgaggacgcgaatattatagagacttgaatatattcatatttgtaggcata |
82 |
Q |
| |
|
||||||| |||||| | ||| |||||||||||||| ||||||||| ||||||||||||||||| |
|
|
| T |
45425346 |
aatgttgtagatcctaagacatgaatattatagagaattgaatataatcatatttgtaggcata |
45425283 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 44 - 82
Target Start/End: Original strand, 13999236 - 13999274
Alignment:
| Q |
44 |
tattatagagacttgaatatattcatatttgtaggcata |
82 |
Q |
| |
|
|||||| |||||||||||||| ||||||||||||||||| |
|
|
| T |
13999236 |
tattatggagacttgaatatagtcatatttgtaggcata |
13999274 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 51 - 83
Target Start/End: Original strand, 47551377 - 47551409
Alignment:
| Q |
51 |
gagacttgaatatattcatatttgtaggcatag |
83 |
Q |
| |
|
|||||||||||||| |||||||||||||||||| |
|
|
| T |
47551377 |
gagacttgaatatagtcatatttgtaggcatag |
47551409 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 35; Significance: 0.0000000002; HSPs: 5)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 17767433 - 17767367
Alignment:
| Q |
17 |
tcaatgttgcagatccgaggacgcgaatattatagagacttgaatatattcatatttgtaggcatag |
83 |
Q |
| |
|
|||| |||||||||||| ||| || |||||| |||||||||||||| |||||||||||||||||| |
|
|
| T |
17767433 |
tcaacgttgcagatccggagacatgagtattattgagacttgaatatagtcatatttgtaggcatag |
17767367 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 44 - 83
Target Start/End: Complemental strand, 4604147 - 4604108
Alignment:
| Q |
44 |
tattatagagacttgaatatattcatatttgtaggcatag |
83 |
Q |
| |
|
|||| |||||||||||||||| |||||||||||||||||| |
|
|
| T |
4604147 |
tattctagagacttgaatatagtcatatttgtaggcatag |
4604108 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 44 - 83
Target Start/End: Complemental strand, 11798368 - 11798329
Alignment:
| Q |
44 |
tattatagagacttgaatatattcatatttgtaggcatag |
83 |
Q |
| |
|
|||||| |||||||||||||| |||||||||||||||||| |
|
|
| T |
11798368 |
tattatggagacttgaatatagtcatatttgtaggcatag |
11798329 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 82
Target Start/End: Complemental strand, 2763394 - 2763329
Alignment:
| Q |
17 |
tcaatgttgcagatccgaggacgcgaatattatagagacttgaatatattcatatttgtaggcata |
82 |
Q |
| |
|
|||| ||||||||||||| ||| || |||| |||||| ||||||||| |||||||| |||||||| |
|
|
| T |
2763394 |
tcaacgttgcagatccgaagacatgagtattttagagatttgaatataatcatatttataggcata |
2763329 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 82
Target Start/End: Complemental strand, 7581960 - 7581895
Alignment:
| Q |
17 |
tcaatgttgcagatccgaggacgcgaatattatagagacttgaatatattcatatttgtaggcata |
82 |
Q |
| |
|
|||| |||| |||||||| ||| ||||||| | ||||||| |||||| ||||||||||||||||| |
|
|
| T |
7581960 |
tcaacgttgtagatccgaagacatgaatattctggagacttcaatataatcatatttgtaggcata |
7581895 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 31; Significance: 0.00000004; HSPs: 5)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 101 - 158
Target Start/End: Original strand, 38434922 - 38434982
Alignment:
| Q |
101 |
cattttatgctattaac---gataatgtaagtgtgtttacagattcatccgttttattttt |
158 |
Q |
| |
|
||||||||||||||||| ||| |||| ||| ||||||||||||||||| |||||||||| |
|
|
| T |
38434922 |
cattttatgctattaacatggatgatgtgagtttgtttacagattcatcctttttattttt |
38434982 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 5814591 - 5814659
Alignment:
| Q |
14 |
tcatcaatgttgcagatccgaggacgcgaatattatagagacttgaatatattcatatttgtaggcata |
82 |
Q |
| |
|
||||||| ||||||||||| ||| || |||| | |||||||||||||| ||||||||||||||||| |
|
|
| T |
5814591 |
tcatcaacgttgcagatccagagacatgagtattctggagacttgaatatagtcatatttgtaggcata |
5814659 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 22 - 82
Target Start/End: Complemental strand, 12716985 - 12716925
Alignment:
| Q |
22 |
gttgcagatccgaggacgcgaatattatagagacttgaatatattcatatttgtaggcata |
82 |
Q |
| |
|
||||||||||| | ||| ||||||| ||||||||| |||||| |||||| |||||||||| |
|
|
| T |
12716985 |
gttgcagatccaaagacatgaatattctagagactttaatatagtcatatgtgtaggcata |
12716925 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 50 - 82
Target Start/End: Original strand, 15182755 - 15182787
Alignment:
| Q |
50 |
agagacttgaatatattcatatttgtaggcata |
82 |
Q |
| |
|
||||||||||||||||||| ||||||||||||| |
|
|
| T |
15182755 |
agagacttgaatatattcacatttgtaggcata |
15182787 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 51 - 83
Target Start/End: Original strand, 28837353 - 28837385
Alignment:
| Q |
51 |
gagacttgaatatattcatatttgtaggcatag |
83 |
Q |
| |
|
|||||||||||||| |||||||||||||||||| |
|
|
| T |
28837353 |
gagacttgaatatagtcatatttgtaggcatag |
28837385 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 30; Significance: 0.0000002; HSPs: 5)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 41 - 82
Target Start/End: Original strand, 25084296 - 25084337
Alignment:
| Q |
41 |
gaatattatagagacttgaatatattcatatttgtaggcata |
82 |
Q |
| |
|
||||||| | |||||||||||||| ||||||||||||||||| |
|
|
| T |
25084296 |
gaatattctggagacttgaatataatcatatttgtaggcata |
25084337 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 83
Target Start/End: Complemental strand, 29017158 - 29017097
Alignment:
| Q |
22 |
gttgcagatccgaggacgcgaatattatagagacttgaatatattcatatttgtaggcatag |
83 |
Q |
| |
|
||||||||||||| ||| | ||||| |||||||||||||||| |||||||| || |||||| |
|
|
| T |
29017158 |
gttgcagatccgaagacatgtatattctagagacttgaatatagtcatatttatatgcatag |
29017097 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 83
Target Start/End: Original strand, 53962363 - 53962432
Alignment:
| Q |
14 |
tcatcaatgttgcagatccgaggacgcgaatattatagagacttgaatatattcatatttgtaggcatag |
83 |
Q |
| |
|
||||||| |||| ||||| | |||| ||||||| | ||||||||||||| |||||||||||||||||| |
|
|
| T |
53962363 |
tcatcaacgttggagatcaggggacatgaatatttcaaagacttgaatatagtcatatttgtaggcatag |
53962432 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 51 - 83
Target Start/End: Original strand, 33637691 - 33637723
Alignment:
| Q |
51 |
gagacttgaatatattcatatttgtaggcatag |
83 |
Q |
| |
|
|||||||||||||| |||||||||||||||||| |
|
|
| T |
33637691 |
gagacttgaatatagtcatatttgtaggcatag |
33637723 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 51 - 83
Target Start/End: Complemental strand, 48652281 - 48652249
Alignment:
| Q |
51 |
gagacttgaatatattcatatttgtaggcatag |
83 |
Q |
| |
|
|||||||||||||| |||||||||||||||||| |
|
|
| T |
48652281 |
gagacttgaatatagtcatatttgtaggcatag |
48652249 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 41 - 73
Target Start/End: Complemental strand, 44972264 - 44972232
Alignment:
| Q |
41 |
gaatattatagagacttgaatatattcatattt |
73 |
Q |
| |
|
|||||||||||||||||||||||| |||||||| |
|
|
| T |
44972264 |
gaatattatagagacttgaatataatcatattt |
44972232 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 50 - 82
Target Start/End: Original strand, 35402320 - 35402352
Alignment:
| Q |
50 |
agagacttgaatatattcatatttgtaggcata |
82 |
Q |
| |
|
||||||||||||||| ||||||||||||||||| |
|
|
| T |
35402320 |
agagacttgaatatagtcatatttgtaggcata |
35402352 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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