View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4950_low_3 (Length: 385)

Name: NF4950_low_3
Description: NF4950
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4950_low_3
NF4950_low_3
[»] chr6 (14 HSPs)
chr6 (13-246)||(1915667-1915900)
chr6 (238-284)||(1915204-1915250)
chr6 (345-385)||(1106784-1106824)
chr6 (345-385)||(1915103-1915143)
chr6 (345-385)||(19402727-19402767)
chr6 (345-385)||(23638037-23638077)
chr6 (345-385)||(23654414-23654454)
chr6 (345-385)||(31937337-31937377)
chr6 (347-385)||(31705331-31705369)
chr6 (345-382)||(35219833-35219870)
chr6 (345-385)||(2304755-2304795)
chr6 (345-385)||(6419775-6419815)
chr6 (345-385)||(12481287-12481327)
chr6 (345-385)||(15590025-15590065)
[»] chr2 (28 HSPs)
chr2 (346-385)||(32015418-32015457)
chr2 (345-385)||(11798440-11798480)
chr2 (347-385)||(13740577-13740615)
chr2 (345-385)||(4426575-4426615)
chr2 (345-385)||(9978586-9978626)
chr2 (345-385)||(10286924-10286964)
chr2 (345-385)||(22597299-22597339)
chr2 (345-385)||(28231014-28231054)
chr2 (345-385)||(28261805-28261845)
chr2 (345-385)||(32314606-32314646)
chr2 (345-385)||(34962993-34963033)
chr2 (345-385)||(43474045-43474085)
chr2 (346-385)||(35333670-35333709)
chr2 (347-385)||(5754454-5754492)
chr2 (347-385)||(36868174-36868212)
chr2 (348-385)||(4739496-4739533)
chr2 (345-385)||(4732234-4732274)
chr2 (345-385)||(9689902-9689942)
chr2 (345-385)||(12704851-12704891)
chr2 (345-385)||(13878926-13878966)
chr2 (345-385)||(14019051-14019091)
chr2 (349-385)||(20561049-20561085)
chr2 (349-385)||(20607231-20607267)
chr2 (345-385)||(25068016-25068055)
chr2 (345-385)||(27095870-27095910)
chr2 (345-385)||(27666374-27666414)
chr2 (345-385)||(33012212-33012252)
chr2 (345-385)||(38535222-38535262)
[»] chr8 (21 HSPs)
chr8 (345-385)||(4757329-4757369)
chr8 (348-385)||(38546078-38546115)
chr8 (345-385)||(1810147-1810187)
chr8 (345-385)||(7579780-7579820)
chr8 (345-385)||(10952206-10952246)
chr8 (345-385)||(10960211-10960251)
chr8 (345-385)||(43937102-43937142)
chr8 (346-385)||(22787657-22787696)
chr8 (345-384)||(31308312-31308351)
chr8 (346-385)||(37128412-37128451)
chr8 (347-385)||(14600623-14600661)
chr8 (349-382)||(10148113-10148146)
chr8 (348-385)||(31407673-31407710)
chr8 (345-385)||(1039819-1039859)
chr8 (346-382)||(2234398-2234434)
chr8 (345-385)||(9501750-9501790)
chr8 (345-385)||(24699996-24700036)
chr8 (349-385)||(28297032-28297068)
chr8 (345-385)||(30026807-30026847)
chr8 (345-385)||(37612817-37612857)
chr8 (345-385)||(41361896-41361936)
[»] chr7 (20 HSPs)
chr7 (345-385)||(29352390-29352430)
chr7 (345-385)||(45482228-45482268)
chr7 (346-385)||(41288121-41288160)
chr7 (347-385)||(3266552-3266590)
chr7 (347-385)||(45457473-45457511)
chr7 (345-385)||(1281054-1281094)
chr7 (345-385)||(10094605-10094645)
chr7 (345-385)||(21603624-21603664)
chr7 (345-385)||(24988397-24988437)
chr7 (346-385)||(9719890-9719929)
chr7 (346-385)||(24320140-24320179)
chr7 (346-385)||(37714644-37714683)
chr7 (347-385)||(11833184-11833222)
chr7 (347-385)||(25112678-25112716)
chr7 (347-385)||(48304310-48304348)
chr7 (348-385)||(6496059-6496096)
chr7 (349-385)||(9785485-9785521)
chr7 (345-385)||(21990826-21990866)
chr7 (345-385)||(36579258-36579298)
chr7 (345-385)||(46025946-46025986)
[»] chr5 (20 HSPs)
chr5 (345-385)||(6281208-6281248)
chr5 (345-385)||(17096158-17096198)
chr5 (345-385)||(980946-980986)
chr5 (345-385)||(11734736-11734776)
chr5 (345-385)||(11858074-11858114)
chr5 (345-385)||(17331492-17331532)
chr5 (345-385)||(33164385-33164425)
chr5 (349-385)||(39531327-39531363)
chr5 (346-385)||(32309329-32309368)
chr5 (346-385)||(39531654-39531693)
chr5 (347-385)||(39415571-39415609)
chr5 (347-385)||(42609310-42609348)
chr5 (348-385)||(23882033-23882070)
chr5 (345-382)||(29097953-29097990)
chr5 (345-385)||(3079251-3079291)
chr5 (349-385)||(17687373-17687409)
chr5 (345-385)||(20483350-20483390)
chr5 (345-385)||(25487772-25487812)
chr5 (346-382)||(26294977-26295013)
chr5 (345-385)||(32347631-32347671)
[»] chr4 (26 HSPs)
chr4 (345-385)||(8712694-8712734)
chr4 (346-385)||(29923000-29923039)
chr4 (345-385)||(394191-394231)
chr4 (345-385)||(7861123-7861163)
chr4 (345-385)||(11210230-11210270)
chr4 (345-385)||(27394994-27395034)
chr4 (345-385)||(29268694-29268734)
chr4 (345-385)||(36124265-36124305)
chr4 (345-385)||(42197717-42197757)
chr4 (346-385)||(13586157-13586196)
chr4 (345-384)||(38944066-38944105)
chr4 (345-383)||(3159158-3159196)
chr4 (347-385)||(39523575-39523613)
chr4 (345-382)||(477932-477969)
chr4 (348-385)||(22757261-22757298)
chr4 (345-382)||(39837759-39837796)
chr4 (345-382)||(51152288-51152325)
chr4 (349-385)||(6082341-6082377)
chr4 (345-385)||(7060487-7060527)
chr4 (345-385)||(13965724-13965764)
chr4 (345-385)||(20399820-20399860)
chr4 (345-385)||(26742380-26742420)
chr4 (345-385)||(32616776-32616816)
chr4 (349-385)||(44756959-44756995)
chr4 (345-385)||(50801381-50801421)
chr4 (346-382)||(53647797-53647833)
[»] chr1 (16 HSPs)
chr1 (345-385)||(14265448-14265488)
chr1 (346-385)||(3232953-3232992)
chr1 (346-385)||(32878873-32878912)
chr1 (347-385)||(13999132-13999170)
chr1 (345-385)||(15391169-15391209)
chr1 (345-385)||(20411736-20411776)
chr1 (345-385)||(27534861-27534901)
chr1 (345-385)||(44517311-44517351)
chr1 (345-385)||(45193545-45193585)
chr1 (345-385)||(45750642-45750682)
chr1 (345-382)||(33486950-33486987)
chr1 (345-385)||(7995477-7995517)
chr1 (349-385)||(9298333-9298369)
chr1 (345-385)||(13488453-13488493)
chr1 (345-381)||(29205449-29205485)
chr1 (349-385)||(42276523-42276559)
[»] scaffold0007 (1 HSPs)
scaffold0007 (345-382)||(201971-202008)
[»] scaffold1350 (1 HSPs)
scaffold1350 (345-385)||(1738-1778)
[»] scaffold0536 (1 HSPs)
scaffold0536 (345-385)||(3064-3104)
[»] chr3 (18 HSPs)
chr3 (345-385)||(3457103-3457143)
chr3 (345-385)||(11819247-11819287)
chr3 (345-385)||(14585626-14585666)
chr3 (345-385)||(35174872-35174912)
chr3 (345-385)||(36624620-36624660)
chr3 (345-385)||(49628020-49628060)
chr3 (345-385)||(53402785-53402825)
chr3 (345-385)||(54706640-54706680)
chr3 (346-385)||(22485130-22485169)
chr3 (346-385)||(36691724-36691763)
chr3 (346-385)||(55455030-55455069)
chr3 (345-385)||(31270490-31270530)
chr3 (345-385)||(33637567-33637607)
chr3 (349-385)||(40013197-40013233)
chr3 (346-382)||(40401429-40401465)
chr3 (345-385)||(40883791-40883831)
chr3 (345-385)||(48652365-48652405)
chr3 (345-385)||(53962282-53962322)
[»] scaffold0432 (1 HSPs)
scaffold0432 (345-383)||(2339-2377)
[»] scaffold0121 (1 HSPs)
scaffold0121 (345-385)||(13162-13202)
[»] scaffold0056 (1 HSPs)
scaffold0056 (349-385)||(74332-74368)


Alignment Details
Target: chr6 (Bit Score: 214; Significance: 1e-117; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 13 - 246
Target Start/End: Complemental strand, 1915900 - 1915667
Alignment:
Q  13 aatatccaatatgatgattgatatttgtattgacaagttggcaattagtaaatttagaattataggtaaaaagttttcactaatgtttaacgataatcaa 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||| |||||    
T  1915900 aatatccaatatgatgattgatatttgtattgacaagttggcaattagtaaatttaaaattataggtaaaaagttttcactgatgtttaacgatgatcaa 1915801  T
Q  113 gttttatcaagaaacatgtagactaaggtagatttttctctgtcgaattttctatgtaagcatagggtcaatgattgaatccttgatcacttaggattcg 212  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  1915800 gttttatcaagaaacatgtagactaaggtagatttttctctgtcgaattttctacgtaagcatagggtcaatgattgaatccttgatcacttaggattcg 1915701  T
Q  213 atacaaatgtgagaaactttgtatgttaatcttt 246  Q
    |||||||||||||| |||||||||||||||||||    
T  1915700 atacaaatgtgagagactttgtatgttaatcttt 1915667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 238 - 284
Target Start/End: Complemental strand, 1915250 - 1915204
Alignment:
Q  238 ttaatcttttcacttatgtttgttaatctttttgggtcaactgccga 284  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  1915250 ttaatcttttcacttatgtttgttaatctttttgggtcaactgccga 1915204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 345 - 385
Target Start/End: Complemental strand, 1106824 - 1106784
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  1106824 cccgtcttagtacgatgtttatttgattcaggttgaaagat 1106784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 345 - 385
Target Start/End: Complemental strand, 1915143 - 1915103
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    |||||||||||||| ||||||||||||||||||||||||||    
T  1915143 cccgtcttagtacggtgtttatttgattcaggttgaaagat 1915103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 345 - 385
Target Start/End: Complemental strand, 19402767 - 19402727
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||||||| || ||||||||||||||||||||||||||    
T  19402767 cccgtcttagtgcggtgtttatttgattcaggttgaaagat 19402727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 345 - 385
Target Start/End: Complemental strand, 23638077 - 23638037
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||||||| || ||||||||||||||||||||||||||    
T  23638077 cccgtcttagtgcggtgtttatttgattcaggttgaaagat 23638037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 345 - 385
Target Start/End: Original strand, 23654414 - 23654454
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||||||| || ||||||||||||||||||||||||||    
T  23654414 cccgtcttagtgcggtgtttatttgattcaggttgaaagat 23654454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 345 - 385
Target Start/End: Complemental strand, 31937377 - 31937337
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||||||| || ||||||||||||||||||||||||||    
T  31937377 cccgtcttagtgcggtgtttatttgattcaggttgaaagat 31937337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 347 - 385
Target Start/End: Original strand, 31705331 - 31705369
Alignment:
Q  347 cgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||||| || ||||||||||||||||||||||||||    
T  31705331 cgtcttagtgcggtgtttatttgattcaggttgaaagat 31705369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 345 - 382
Target Start/End: Complemental strand, 35219870 - 35219833
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaa 382  Q
    ||||||||||| || |||||||||||||||||||||||    
T  35219870 cccgtcttagtgcggtgtttatttgattcaggttgaaa 35219833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 345 - 385
Target Start/End: Complemental strand, 2304795 - 2304755
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||||||| |  ||||||||||||||||||||||||||    
T  2304795 cccgtcttagtgcagtgtttatttgattcaggttgaaagat 2304755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 345 - 385
Target Start/End: Complemental strand, 6419815 - 6419775
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||||||| | ||||||||||| |||||||||||||||    
T  6419815 cccgtcttagtgcaatgtttatttggttcaggttgaaagat 6419775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 345 - 385
Target Start/End: Complemental strand, 12481327 - 12481287
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||||||| || ||||||||||||| ||||||||||||    
T  12481327 cccgtcttagtgcggtgtttatttgatttaggttgaaagat 12481287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 345 - 385
Target Start/End: Complemental strand, 15590065 - 15590025
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||||| | || ||||||||||||||||||||||||||    
T  15590065 cccgtcttaatgcggtgtttatttgattcaggttgaaagat 15590025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 346 - 385
Target Start/End: Original strand, 32015418 - 32015457
Alignment:
Q  346 ccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  32015418 ccgtcttagtacgatgtttatttgattcaggttgaaagat 32015457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 345 - 385
Target Start/End: Complemental strand, 11798480 - 11798440
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  11798480 cccgtcttagtgcgatgtttatttgattcaggttgaaagat 11798440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 347 - 385
Target Start/End: Complemental strand, 13740615 - 13740577
Alignment:
Q  347 cgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  13740615 cgtcttagtgcgatgtttatttgattcaggttgaaagat 13740577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 345 - 385
Target Start/End: Complemental strand, 4426615 - 4426575
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||||||| || ||||||||||||||||||||||||||    
T  4426615 cccgtcttagtgcggtgtttatttgattcaggttgaaagat 4426575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 345 - 385
Target Start/End: Complemental strand, 9978626 - 9978586
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||||||| || ||||||||||||||||||||||||||    
T  9978626 cccgtcttagtgcggtgtttatttgattcaggttgaaagat 9978586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 345 - 385
Target Start/End: Complemental strand, 10286964 - 10286924
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||||||| || ||||||||||||||||||||||||||    
T  10286964 cccgtcttagtgcggtgtttatttgattcaggttgaaagat 10286924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 345 - 385
Target Start/End: Original strand, 22597299 - 22597339
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||||||| || ||||||||||||||||||||||||||    
T  22597299 cccgtcttagtgcggtgtttatttgattcaggttgaaagat 22597339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 345 - 385
Target Start/End: Complemental strand, 28231054 - 28231014
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||||||| || ||||||||||||||||||||||||||    
T  28231054 cccgtcttagtgcggtgtttatttgattcaggttgaaagat 28231014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 345 - 385
Target Start/End: Complemental strand, 28261845 - 28261805
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||||||| || ||||||||||||||||||||||||||    
T  28261845 cccgtcttagtgcggtgtttatttgattcaggttgaaagat 28261805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 345 - 385
Target Start/End: Original strand, 32314606 - 32314646
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||||||| || ||||||||||||||||||||||||||    
T  32314606 cccgtcttagtgcggtgtttatttgattcaggttgaaagat 32314646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 345 - 385
Target Start/End: Complemental strand, 34963033 - 34962993
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||||||| || ||||||||||||||||||||||||||    
T  34963033 cccgtcttagtgcggtgtttatttgattcaggttgaaagat 34962993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 345 - 385
Target Start/End: Complemental strand, 43474085 - 43474045
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||||||| || ||||||||||||||||||||||||||    
T  43474085 cccgtcttagtgcggtgtttatttgattcaggttgaaagat 43474045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 346 - 385
Target Start/End: Original strand, 35333670 - 35333709
Alignment:
Q  346 ccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    |||||||||| || ||||||||||||||||||||||||||    
T  35333670 ccgtcttagtgcggtgtttatttgattcaggttgaaagat 35333709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 347 - 385
Target Start/End: Original strand, 5754454 - 5754492
Alignment:
Q  347 cgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||||| || ||||||||||||||||||||||||||    
T  5754454 cgtcttagtgcggtgtttatttgattcaggttgaaagat 5754492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 347 - 385
Target Start/End: Original strand, 36868174 - 36868212
Alignment:
Q  347 cgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||||| || ||||||||||||||||||||||||||    
T  36868174 cgtcttagtgcggtgtttatttgattcaggttgaaagat 36868212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 348 - 385
Target Start/End: Original strand, 4739496 - 4739533
Alignment:
Q  348 gtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    |||||||| || ||||||||||||||||||||||||||    
T  4739496 gtcttagtgcggtgtttatttgattcaggttgaaagat 4739533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 345 - 385
Target Start/End: Original strand, 4732234 - 4732274
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||||||| || ||||||||||||||| ||||||||||    
T  4732234 cccgtcttagtgcggtgtttatttgattcaagttgaaagat 4732274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 345 - 385
Target Start/End: Complemental strand, 9689942 - 9689902
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||| ||| || ||||||||||||||||||||||||||    
T  9689942 cccgtctcagtgcggtgtttatttgattcaggttgaaagat 9689902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 345 - 385
Target Start/End: Original strand, 12704851 - 12704891
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||||||| || ||||||||||||| ||||||||||||    
T  12704851 cccgtcttagtgcggtgtttatttgatttaggttgaaagat 12704891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 345 - 385
Target Start/End: Complemental strand, 13878966 - 13878926
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||| |||||| | ||||||||||||||||||||||||||    
T  13878966 cccgttttagtagggtgtttatttgattcaggttgaaagat 13878926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 345 - 385
Target Start/End: Complemental strand, 14019091 - 14019051
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||| |||||| | ||||||||||||||||||||||||||    
T  14019091 cccgttttagtagggtgtttatttgattcaggttgaaagat 14019051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 349 - 385
Target Start/End: Complemental strand, 20561085 - 20561049
Alignment:
Q  349 tcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||| || ||||||||||||||||||||||||||    
T  20561085 tcttagtgcggtgtttatttgattcaggttgaaagat 20561049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 349 - 385
Target Start/End: Complemental strand, 20607267 - 20607231
Alignment:
Q  349 tcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||| || ||||||||||||||||||||||||||    
T  20607267 tcttagttcggtgtttatttgattcaggttgaaagat 20607231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 345 - 385
Target Start/End: Original strand, 25068016 - 25068055
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||||||| || ||||||||||||||||||||||||||    
T  25068016 cccgtcttagtgcg-tgtttatttgattcaggttgaaagat 25068055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 345 - 385
Target Start/End: Original strand, 27095870 - 27095910
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    |||||| |||| |||||||||||||||||| ||||||||||    
T  27095870 cccgtcgtagtgcgatgtttatttgattcaagttgaaagat 27095910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 345 - 385
Target Start/End: Original strand, 27666374 - 27666414
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||||||| || ||||||||||||||||||| ||||||    
T  27666374 cccgtcttagtgcggtgtttatttgattcaggttaaaagat 27666414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 345 - 385
Target Start/End: Original strand, 33012212 - 33012252
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||||||| || ||||||||| ||||||||||||||||    
T  33012212 cccgtcttagtgcggtgtttatttaattcaggttgaaagat 33012252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 345 - 385
Target Start/End: Complemental strand, 38535262 - 38535222
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    |||||| |||| || ||||||||||||||||||||||||||    
T  38535262 cccgtcctagtgcggtgtttatttgattcaggttgaaagat 38535222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 37; Significance: 0.000000000009; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 345 - 385
Target Start/End: Original strand, 4757329 - 4757369
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  4757329 cccgtcttagtgcgatgtttatttgattcaggttgaaagat 4757369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 348 - 385
Target Start/End: Complemental strand, 38546115 - 38546078
Alignment:
Q  348 gtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    |||||||||||||||||||||||||||| |||||||||    
T  38546115 gtcttagtacgatgtttatttgattcagattgaaagat 38546078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 345 - 385
Target Start/End: Complemental strand, 1810187 - 1810147
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||||||  |||||||||||||||||||||||||||||    
T  1810187 cccgtcttagcgcgatgtttatttgattcaggttgaaagat 1810147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 345 - 385
Target Start/End: Complemental strand, 7579820 - 7579780
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||||||| || ||||||||||||||||||||||||||    
T  7579820 cccgtcttagtgcggtgtttatttgattcaggttgaaagat 7579780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 345 - 385
Target Start/End: Complemental strand, 10952246 - 10952206
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||| |||||| ||||||||||||||||||||||||||||    
T  10952246 cccgttttagtaggatgtttatttgattcaggttgaaagat 10952206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 345 - 385
Target Start/End: Complemental strand, 10960251 - 10960211
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||| |||||| ||||||||||||||||||||||||||||    
T  10960251 cccgttttagtaggatgtttatttgattcaggttgaaagat 10960211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 345 - 385
Target Start/End: Complemental strand, 43937142 - 43937102
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||||||| || ||||||||||||||||||||||||||    
T  43937142 cccgtcttagtgcggtgtttatttgattcaggttgaaagat 43937102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 346 - 385
Target Start/End: Original strand, 22787657 - 22787696
Alignment:
Q  346 ccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    |||||||||| || ||||||||||||||||||||||||||    
T  22787657 ccgtcttagtgcggtgtttatttgattcaggttgaaagat 22787696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 345 - 384
Target Start/End: Original strand, 31308312 - 31308351
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaaga 384  Q
    ||||| |||||||||||||||||| |||||||||||||||    
T  31308312 cccgttttagtacgatgtttatttaattcaggttgaaaga 31308351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 346 - 385
Target Start/End: Complemental strand, 37128451 - 37128412
Alignment:
Q  346 ccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    |||||||||| || ||||||||||||||||||||||||||    
T  37128451 ccgtcttagtgcggtgtttatttgattcaggttgaaagat 37128412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 347 - 385
Target Start/End: Complemental strand, 14600661 - 14600623
Alignment:
Q  347 cgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||||| || ||||||||||||||||||||||||||    
T  14600661 cgtcttagtgcggtgtttatttgattcaggttgaaagat 14600623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 349 - 382
Target Start/End: Original strand, 10148113 - 10148146
Alignment:
Q  349 tcttagtacgatgtttatttgattcaggttgaaa 382  Q
    |||||||||| |||||||||||||||||||||||    
T  10148113 tcttagtacggtgtttatttgattcaggttgaaa 10148146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 348 - 385
Target Start/End: Complemental strand, 31407710 - 31407673
Alignment:
Q  348 gtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    |||||||| || ||||||||||||||||||||||||||    
T  31407710 gtcttagtgcggtgtttatttgattcaggttgaaagat 31407673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 345 - 385
Target Start/End: Complemental strand, 1039859 - 1039819
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||||||| || |||||||||||| |||||||||||||    
T  1039859 cccgtcttagtgcggtgtttatttgatccaggttgaaagat 1039819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 346 - 382
Target Start/End: Complemental strand, 2234434 - 2234398
Alignment:
Q  346 ccgtcttagtacgatgtttatttgattcaggttgaaa 382  Q
    |||||||||| || |||||||||||||||||||||||    
T  2234434 ccgtcttagtgcggtgtttatttgattcaggttgaaa 2234398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 345 - 385
Target Start/End: Original strand, 9501750 - 9501790
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    |||||||| || || ||||||||||||||||||||||||||    
T  9501750 cccgtctttgtgcggtgtttatttgattcaggttgaaagat 9501790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 345 - 385
Target Start/End: Original strand, 24699996 - 24700036
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||| ||||| || ||||||||||||||||||||||||||    
T  24699996 cccgtgttagtgcggtgtttatttgattcaggttgaaagat 24700036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 349 - 385
Target Start/End: Complemental strand, 28297068 - 28297032
Alignment:
Q  349 tcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||| || ||||||||||||||||||||||||||    
T  28297068 tcttagtgcggtgtttatttgattcaggttgaaagat 28297032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 345 - 385
Target Start/End: Complemental strand, 30026847 - 30026807
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||||||| || ||||||||||||||| ||||||||||    
T  30026847 cccgtcttagtgcggtgtttatttgattcatgttgaaagat 30026807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 345 - 385
Target Start/End: Original strand, 37612817 - 37612857
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||||||| || ||||||||||||||| ||||||||||    
T  37612817 cccgtcttagtgcggtgtttatttgattcaagttgaaagat 37612857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 345 - 385
Target Start/End: Original strand, 41361896 - 41361936
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||| ||||| || ||||||||||||||||||||||||||    
T  41361896 cccgttttagtgcggtgtttatttgattcaggttgaaagat 41361936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 37; Significance: 0.000000000009; HSPs: 20)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 345 - 385
Target Start/End: Original strand, 29352390 - 29352430
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  29352390 cccgtcttagtgcgatgtttatttgattcaggttgaaagat 29352430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 345 - 385
Target Start/End: Original strand, 45482228 - 45482268
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  45482228 cccgtcttagtgcgatgtttatttgattcaggttgaaagat 45482268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 346 - 385
Target Start/End: Original strand, 41288121 - 41288160
Alignment:
Q  346 ccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  41288121 ccgtcttagtacggtgtttatttgattcaggttgaaagat 41288160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 347 - 385
Target Start/End: Original strand, 3266552 - 3266590
Alignment:
Q  347 cgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  3266552 cgtcttagtacggtgtttatttgattcaggttgaaagat 3266590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 347 - 385
Target Start/End: Complemental strand, 45457511 - 45457473
Alignment:
Q  347 cgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  45457511 cgtcttagtacggtgtttatttgattcaggttgaaagat 45457473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 345 - 385
Target Start/End: Complemental strand, 1281094 - 1281054
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||||||| || ||||||||||||||||||||||||||    
T  1281094 cccgtcttagtgcggtgtttatttgattcaggttgaaagat 1281054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 345 - 385
Target Start/End: Original strand, 10094605 - 10094645
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||||||| || ||||||||||||||||||||||||||    
T  10094605 cccgtcttagtgcggtgtttatttgattcaggttgaaagat 10094645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 345 - 385
Target Start/End: Original strand, 21603624 - 21603664
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||||||| || ||||||||||||||||||||||||||    
T  21603624 cccgtcttagtgcggtgtttatttgattcaggttgaaagat 21603664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 345 - 385
Target Start/End: Complemental strand, 24988437 - 24988397
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||||||| || ||||||||||||||||||||||||||    
T  24988437 cccgtcttagtgcggtgtttatttgattcaggttgaaagat 24988397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 346 - 385
Target Start/End: Complemental strand, 9719929 - 9719890
Alignment:
Q  346 ccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    |||||||||| || ||||||||||||||||||||||||||    
T  9719929 ccgtcttagtgcggtgtttatttgattcaggttgaaagat 9719890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 346 - 385
Target Start/End: Complemental strand, 24320179 - 24320140
Alignment:
Q  346 ccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    |||||||||| || ||||||||||||||||||||||||||    
T  24320179 ccgtcttagtgcggtgtttatttgattcaggttgaaagat 24320140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 346 - 385
Target Start/End: Original strand, 37714644 - 37714683
Alignment:
Q  346 ccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    |||||||||| | |||||||||||||||||||||||||||    
T  37714644 ccgtcttagtgcaatgtttatttgattcaggttgaaagat 37714683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 347 - 385
Target Start/End: Original strand, 11833184 - 11833222
Alignment:
Q  347 cgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||||| || ||||||||||||||||||||||||||    
T  11833184 cgtcttagtgcggtgtttatttgattcaggttgaaagat 11833222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 347 - 385
Target Start/End: Original strand, 25112678 - 25112716
Alignment:
Q  347 cgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    |||||||||||||||||||||||||| | ||||||||||    
T  25112678 cgtcttagtacgatgtttatttgatttaagttgaaagat 25112716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 347 - 385
Target Start/End: Complemental strand, 48304348 - 48304310
Alignment:
Q  347 cgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||||| || ||||||||||||||||||||||||||    
T  48304348 cgtcttagtgcggtgtttatttgattcaggttgaaagat 48304310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 348 - 385
Target Start/End: Original strand, 6496059 - 6496096
Alignment:
Q  348 gtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    |||||||| | |||||||||||||||||||||||||||    
T  6496059 gtcttagtgcaatgtttatttgattcaggttgaaagat 6496096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 349 - 385
Target Start/End: Original strand, 9785485 - 9785521
Alignment:
Q  349 tcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||| || ||||||||||||||||||||||||||    
T  9785485 tcttagtgcggtgtttatttgattcaggttgaaagat 9785521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 345 - 385
Target Start/End: Original strand, 21990826 - 21990866
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||||||| || |||||||||||||||| |||||||||    
T  21990826 cccgtcttagtgcggtgtttatttgattcagcttgaaagat 21990866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 345 - 385
Target Start/End: Complemental strand, 36579298 - 36579258
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||||||| || |||||||||||||||| |||||||||    
T  36579298 cccgtcttagtgcggtgtttatttgattcagattgaaagat 36579258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 345 - 385
Target Start/End: Complemental strand, 46025986 - 46025946
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||||||| || ||||||||||||| ||||||||||||    
T  46025986 cccgtcttagtgcggtgtttatttgatttaggttgaaagat 46025946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 37; Significance: 0.000000000009; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 345 - 385
Target Start/End: Original strand, 6281208 - 6281248
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  6281208 cccgtcttagtgcgatgtttatttgattcaggttgaaagat 6281248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 345 - 385
Target Start/End: Complemental strand, 17096198 - 17096158
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    |||||||||||||| ||||||||||||||||||||||||||    
T  17096198 cccgtcttagtacggtgtttatttgattcaggttgaaagat 17096158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 345 - 385
Target Start/End: Complemental strand, 980986 - 980946
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||||||| || ||||||||||||||||||||||||||    
T  980986 cccgtcttagtgcggtgtttatttgattcaggttgaaagat 980946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 345 - 385
Target Start/End: Complemental strand, 11734776 - 11734736
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||||||| ||||||||||||||||||| |||||||||    
T  11734776 cccgtcttagtgcgatgtttatttgattcagattgaaagat 11734736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 345 - 385
Target Start/End: Original strand, 11858074 - 11858114
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||||||| || ||||||||||||||||||||||||||    
T  11858074 cccgtcttagtgcggtgtttatttgattcaggttgaaagat 11858114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 345 - 385
Target Start/End: Original strand, 17331492 - 17331532
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||||||| || ||||||||||||||||||||||||||    
T  17331492 cccgtcttagtgcggtgtttatttgattcaggttgaaagat 17331532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 345 - 385
Target Start/End: Complemental strand, 33164425 - 33164385
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||||||| || ||||||||||||||||||||||||||    
T  33164425 cccgtcttagtgcggtgtttatttgattcaggttgaaagat 33164385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 349 - 385
Target Start/End: Complemental strand, 39531363 - 39531327
Alignment:
Q  349 tcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||||||||||||||||||||| |||||||||||    
T  39531363 tcttagtacgatgtttatttgattcgggttgaaagat 39531327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 346 - 385
Target Start/End: Original strand, 32309329 - 32309368
Alignment:
Q  346 ccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||||||||||| |||||||||||||||||| |||||    
T  32309329 ccgtcttagtacgatatttatttgattcaggttgtaagat 32309368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 346 - 385
Target Start/End: Complemental strand, 39531693 - 39531654
Alignment:
Q  346 ccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    |||||||||||| ||| |||||||||||||||||||||||    
T  39531693 ccgtcttagtacaatgcttatttgattcaggttgaaagat 39531654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 347 - 385
Target Start/End: Complemental strand, 39415609 - 39415571
Alignment:
Q  347 cgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    |||||||||| |||||||||||||| |||||||||||||    
T  39415609 cgtcttagtatgatgtttatttgatgcaggttgaaagat 39415571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 347 - 385
Target Start/End: Original strand, 42609310 - 42609348
Alignment:
Q  347 cgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    |||||||||| ||||||||||||||||| ||||||||||    
T  42609310 cgtcttagtatgatgtttatttgattcatgttgaaagat 42609348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 348 - 385
Target Start/End: Complemental strand, 23882070 - 23882033
Alignment:
Q  348 gtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    |||||||| || ||||||||||||||||||||||||||    
T  23882070 gtcttagtgcggtgtttatttgattcaggttgaaagat 23882033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 345 - 382
Target Start/End: Original strand, 29097953 - 29097990
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaa 382  Q
    ||||||||||| || |||||||||||||||||||||||    
T  29097953 cccgtcttagtgcggtgtttatttgattcaggttgaaa 29097990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 345 - 385
Target Start/End: Complemental strand, 3079291 - 3079251
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||||||| |||||||||||||||||  ||||||||||    
T  3079291 cccgtcttagtgcgatgtttatttgattcgagttgaaagat 3079251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 349 - 385
Target Start/End: Original strand, 17687373 - 17687409
Alignment:
Q  349 tcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    |||||||||| |||||||||||||||| |||||||||    
T  17687373 tcttagtacggtgtttatttgattcagattgaaagat 17687409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 345 - 385
Target Start/End: Original strand, 20483350 - 20483390
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    |||||||||||||| ||||||||||| ||| ||||||||||    
T  20483350 cccgtcttagtacggtgtttatttgactcaagttgaaagat 20483390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 345 - 385
Target Start/End: Original strand, 25487772 - 25487812
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||||||| |  ||||||||||||||||||||||||||    
T  25487772 cccgtcttagtgcattgtttatttgattcaggttgaaagat 25487812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 346 - 382
Target Start/End: Complemental strand, 26295013 - 26294977
Alignment:
Q  346 ccgtcttagtacgatgtttatttgattcaggttgaaa 382  Q
    |||||||||| || |||||||||||||||||||||||    
T  26295013 ccgtcttagtgcggtgtttatttgattcaggttgaaa 26294977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 345 - 385
Target Start/End: Complemental strand, 32347671 - 32347631
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    |||||||||||||| ||||||||| ||||| ||||||||||    
T  32347671 cccgtcttagtacggtgtttatttaattcaagttgaaagat 32347631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.000000000009; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 345 - 385
Target Start/End: Original strand, 8712694 - 8712734
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  8712694 cccgtcttagtgcgatgtttatttgattcaggttgaaagat 8712734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 346 - 385
Target Start/End: Original strand, 29923000 - 29923039
Alignment:
Q  346 ccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  29923000 ccgtcttagtacggtgtttatttgattcaggttgaaagat 29923039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 345 - 385
Target Start/End: Complemental strand, 394231 - 394191
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||||||| || ||||||||||||||||||||||||||    
T  394231 cccgtcttagtgcggtgtttatttgattcaggttgaaagat 394191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 345 - 385
Target Start/End: Complemental strand, 7861163 - 7861123
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||||||| || ||||||||||||||||||||||||||    
T  7861163 cccgtcttagtgcggtgtttatttgattcaggttgaaagat 7861123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 345 - 385
Target Start/End: Complemental strand, 11210270 - 11210230
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||||||| || ||||||||||||||||||||||||||    
T  11210270 cccgtcttagtgcggtgtttatttgattcaggttgaaagat 11210230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 345 - 385
Target Start/End: Original strand, 27394994 - 27395034
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||||||| || ||||||||||||||||||||||||||    
T  27394994 cccgtcttagtgcggtgtttatttgattcaggttgaaagat 27395034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 345 - 385
Target Start/End: Complemental strand, 29268734 - 29268694
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||||||| || ||||||||||||||||||||||||||    
T  29268734 cccgtcttagtgcggtgtttatttgattcaggttgaaagat 29268694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 345 - 385
Target Start/End: Complemental strand, 36124305 - 36124265
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||||||| || ||||||||||||||||||||||||||    
T  36124305 cccgtcttagtgcggtgtttatttgattcaggttgaaagat 36124265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 345 - 385
Target Start/End: Original strand, 42197717 - 42197757
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||||||| || ||||||||||||||||||||||||||    
T  42197717 cccgtcttagtgcggtgtttatttgattcaggttgaaagat 42197757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 346 - 385
Target Start/End: Complemental strand, 13586196 - 13586157
Alignment:
Q  346 ccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    |||||||||| || ||||||||||||||||||||||||||    
T  13586196 ccgtcttagtgcggtgtttatttgattcaggttgaaagat 13586157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 345 - 384
Target Start/End: Complemental strand, 38944105 - 38944066
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaaga 384  Q
    ||||||||||| || |||||||||||||||||||||||||    
T  38944105 cccgtcttagtgcggtgtttatttgattcaggttgaaaga 38944066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 345 - 383
Target Start/End: Original strand, 3159158 - 3159196
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaag 383  Q
    ||||||||||| |||||||||||||| ||||||||||||    
T  3159158 cccgtcttagtgcgatgtttatttgaatcaggttgaaag 3159196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 347 - 385
Target Start/End: Original strand, 39523575 - 39523613
Alignment:
Q  347 cgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||||| || ||||||||||||||||||||||||||    
T  39523575 cgtcttagtgcggtgtttatttgattcaggttgaaagat 39523613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 345 - 382
Target Start/End: Complemental strand, 477969 - 477932
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaa 382  Q
    ||||||||||| || |||||||||||||||||||||||    
T  477969 cccgtcttagtgcggtgtttatttgattcaggttgaaa 477932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 348 - 385
Target Start/End: Original strand, 22757261 - 22757298
Alignment:
Q  348 gtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    |||||||| || ||||||||||||||||||||||||||    
T  22757261 gtcttagtgcggtgtttatttgattcaggttgaaagat 22757298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 345 - 382
Target Start/End: Original strand, 39837759 - 39837796
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaa 382  Q
    ||||||||||| || |||||||||||||||||||||||    
T  39837759 cccgtcttagtgcggtgtttatttgattcaggttgaaa 39837796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 345 - 382
Target Start/End: Original strand, 51152288 - 51152325
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaa 382  Q
    ||||| |||||||| |||||||||||||||||||||||    
T  51152288 cccgttttagtacggtgtttatttgattcaggttgaaa 51152325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 349 - 385
Target Start/End: Complemental strand, 6082377 - 6082341
Alignment:
Q  349 tcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    |||||||| ||||||||||||||| ||||||||||||    
T  6082377 tcttagtatgatgtttatttgatttaggttgaaagat 6082341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 345 - 385
Target Start/End: Original strand, 7060487 - 7060527
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||||| | || ||||||||||||||||||||||||||    
T  7060487 cccgtcttaatgcggtgtttatttgattcaggttgaaagat 7060527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 345 - 385
Target Start/End: Original strand, 13965724 - 13965764
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||||||| || ||||||||||||| ||||||||||||    
T  13965724 cccgtcttagtgcggtgtttatttgatttaggttgaaagat 13965764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 345 - 385
Target Start/End: Complemental strand, 20399860 - 20399820
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||||||| || |||||||||||||||| |||||||||    
T  20399860 cccgtcttagtgcggtgtttatttgattcagtttgaaagat 20399820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 345 - 385
Target Start/End: Complemental strand, 26742420 - 26742380
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||||||| || |||||||||||||||| |||||||||    
T  26742420 cccgtcttagtgcggtgtttatttgattcagattgaaagat 26742380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 345 - 385
Target Start/End: Complemental strand, 32616816 - 32616776
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||||||| || ||||||||||||||| ||||||||||    
T  32616816 cccgtcttagtgcggtgtttatttgattcaagttgaaagat 32616776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 349 - 385
Target Start/End: Complemental strand, 44756995 - 44756959
Alignment:
Q  349 tcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||| || ||||||||||||||||||||||||||    
T  44756995 tcttagtgcggtgtttatttgattcaggttgaaagat 44756959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 345 - 385
Target Start/End: Original strand, 50801381 - 50801421
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||||||| |  ||||||||||||||||||||||||||    
T  50801381 cccgtcttagtgctgtgtttatttgattcaggttgaaagat 50801421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 346 - 382
Target Start/End: Original strand, 53647797 - 53647833
Alignment:
Q  346 ccgtcttagtacgatgtttatttgattcaggttgaaa 382  Q
    |||||||||| || |||||||||||||||||||||||    
T  53647797 ccgtcttagtgcggtgtttatttgattcaggttgaaa 53647833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.000000000009; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 345 - 385
Target Start/End: Original strand, 14265448 - 14265488
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  14265448 cccgtcttagtgcgatgtttatttgattcaggttgaaagat 14265488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 346 - 385
Target Start/End: Original strand, 3232953 - 3232992
Alignment:
Q  346 ccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  3232953 ccgtcttagtgcgatgtttatttgattcaggttgaaagat 3232992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 346 - 385
Target Start/End: Original strand, 32878873 - 32878912
Alignment:
Q  346 ccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  32878873 ccgtcttagtacggtgtttatttgattcaggttgaaagat 32878912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 347 - 385
Target Start/End: Original strand, 13999132 - 13999170
Alignment:
Q  347 cgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  13999132 cgtcttagtacgatgtttatttgattcaggttgtaagat 13999170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 345 - 385
Target Start/End: Complemental strand, 15391209 - 15391169
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||||||| || ||||||||||||||||||||||||||    
T  15391209 cccgtcttagtgcggtgtttatttgattcaggttgaaagat 15391169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 345 - 385
Target Start/End: Original strand, 20411736 - 20411776
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||||||| || ||||||||||||||||||||||||||    
T  20411736 cccgtcttagtgcggtgtttatttgattcaggttgaaagat 20411776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 345 - 385
Target Start/End: Original strand, 27534861 - 27534901
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    |||||||||||  ||||||||||||||||||||||||||||    
T  27534861 cccgtcttagtgtgatgtttatttgattcaggttgaaagat 27534901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 345 - 385
Target Start/End: Original strand, 44517311 - 44517351
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||||||| || ||||||||||||||||||||||||||    
T  44517311 cccgtcttagtgcggtgtttatttgattcaggttgaaagat 44517351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 345 - 385
Target Start/End: Complemental strand, 45193585 - 45193545
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    |||||||||||||| ||||||||||| ||||||||||||||    
T  45193585 cccgtcttagtacggtgtttatttgaatcaggttgaaagat 45193545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 345 - 385
Target Start/End: Original strand, 45750642 - 45750682
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||||||| || ||||||||||||||||||||||||||    
T  45750642 cccgtcttagtgcggtgtttatttgattcaggttgaaagat 45750682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 345 - 382
Target Start/End: Complemental strand, 33486987 - 33486950
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaa 382  Q
    ||||||||||| || |||||||||||||||||||||||    
T  33486987 cccgtcttagtgcggtgtttatttgattcaggttgaaa 33486950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 345 - 385
Target Start/End: Complemental strand, 7995517 - 7995477
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    |||||||||||  | ||||||||||||||||||||||||||    
T  7995517 cccgtcttagtgtggtgtttatttgattcaggttgaaagat 7995477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 349 - 385
Target Start/End: Complemental strand, 9298369 - 9298333
Alignment:
Q  349 tcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||| || ||||||||||||||||||||||||||    
T  9298369 tcttagtgcggtgtttatttgattcaggttgaaagat 9298333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 345 - 385
Target Start/End: Complemental strand, 13488493 - 13488453
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||||||| || ||||||||| ||||||||||||||||    
T  13488493 cccgtcttagtgcggtgtttatttaattcaggttgaaagat 13488453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 345 - 381
Target Start/End: Original strand, 29205449 - 29205485
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaa 381  Q
    ||||||||||| || ||||||||||||||||||||||    
T  29205449 cccgtcttagtgcggtgtttatttgattcaggttgaa 29205485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 349 - 385
Target Start/End: Original strand, 42276523 - 42276559
Alignment:
Q  349 tcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||| || ||||||||||||||||||||||||||    
T  42276523 tcttagtgcggtgtttatttgattcaggttgaaagat 42276559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 345 - 382
Target Start/End: Complemental strand, 202008 - 201971
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaa 382  Q
    |||||||||||| |||||||||||||||||||||||||    
T  202008 cccgtcttagtatgatgtttatttgattcaggttgaaa 201971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1350 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold1350
Description:

Target: scaffold1350; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 345 - 385
Target Start/End: Original strand, 1738 - 1778
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||||||| || ||||||||||||||||||||||||||    
T  1738 cccgtcttagtgcggtgtttatttgattcaggttgaaagat 1778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0536 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0536
Description:

Target: scaffold0536; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 345 - 385
Target Start/End: Original strand, 3064 - 3104
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||| |||||||| ||||||||||||||||||||||||||    
T  3064 cccgttttagtacggtgtttatttgattcaggttgaaagat 3104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 33; Significance: 0.000000002; HSPs: 18)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 345 - 385
Target Start/End: Original strand, 3457103 - 3457143
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    |||||||||||||| ||||||||||||||| ||||||||||    
T  3457103 cccgtcttagtacggtgtttatttgattcaagttgaaagat 3457143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 345 - 385
Target Start/End: Original strand, 11819247 - 11819287
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||||||| || ||||||||||||||||||||||||||    
T  11819247 cccgtcttagtgcggtgtttatttgattcaggttgaaagat 11819287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 345 - 385
Target Start/End: Original strand, 14585626 - 14585666
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||||||| || ||||||||||||||||||||||||||    
T  14585626 cccgtcttagtgcggtgtttatttgattcaggttgaaagat 14585666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 345 - 385
Target Start/End: Original strand, 35174872 - 35174912
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||||||| || ||||||||||||||||||||||||||    
T  35174872 cccgtcttagtgcggtgtttatttgattcaggttgaaagat 35174912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 345 - 385
Target Start/End: Complemental strand, 36624660 - 36624620
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||||||| || ||||||||||||||||||||||||||    
T  36624660 cccgtcttagtgcggtgtttatttgattcaggttgaaagat 36624620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 345 - 385
Target Start/End: Complemental strand, 49628060 - 49628020
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||||||| || ||||||||||||||||||||||||||    
T  49628060 cccgtcttagtgcggtgtttatttgattcaggttgaaagat 49628020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 345 - 385
Target Start/End: Original strand, 53402785 - 53402825
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||||||| || ||||||||||||||||||||||||||    
T  53402785 cccgtcttagtgcgctgtttatttgattcaggttgaaagat 53402825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 345 - 385
Target Start/End: Complemental strand, 54706680 - 54706640
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||||||| || ||||||||||||||||||||||||||    
T  54706680 cccgtcttagtgcggtgtttatttgattcaggttgaaagat 54706640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 346 - 385
Target Start/End: Original strand, 22485130 - 22485169
Alignment:
Q  346 ccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    |||||||||| || ||||||||||||||||||||||||||    
T  22485130 ccgtcttagtgcggtgtttatttgattcaggttgaaagat 22485169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 346 - 385
Target Start/End: Complemental strand, 36691763 - 36691724
Alignment:
Q  346 ccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||||||||| |||||||||||| |||||||||||||    
T  36691763 ccgtcttagtacggtgtttatttgatccaggttgaaagat 36691724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 346 - 385
Target Start/End: Original strand, 55455030 - 55455069
Alignment:
Q  346 ccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    |||||||||| || ||||||||||||||||||||||||||    
T  55455030 ccgtcttagtgcggtgtttatttgattcaggttgaaagat 55455069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 345 - 385
Target Start/End: Original strand, 31270490 - 31270530
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||||||| || |||||||| |||||||||||||||||    
T  31270490 cccgtcttagtgcggtgtttattcgattcaggttgaaagat 31270530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 345 - 385
Target Start/End: Original strand, 33637567 - 33637607
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||||||| || ||||||||||||| ||||||||||||    
T  33637567 cccgtcttagtgcggtgtttatttgatttaggttgaaagat 33637607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 349 - 385
Target Start/End: Complemental strand, 40013233 - 40013197
Alignment:
Q  349 tcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||| || ||||||||||||||||||||||||||    
T  40013233 tcttagtgcggtgtttatttgattcaggttgaaagat 40013197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 346 - 382
Target Start/End: Complemental strand, 40401465 - 40401429
Alignment:
Q  346 ccgtcttagtacgatgtttatttgattcaggttgaaa 382  Q
    ||||||||| || ||||||||||||||||||||||||    
T  40401465 ccgtcttagaacaatgtttatttgattcaggttgaaa 40401429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 345 - 385
Target Start/End: Complemental strand, 40883831 - 40883791
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||||||| || ||||| ||||||||||||||||||||    
T  40883831 cccgtcttagtgcggtgtttctttgattcaggttgaaagat 40883791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 345 - 385
Target Start/End: Complemental strand, 48652405 - 48652365
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||||||| || ||||||||||||| ||||||||||||    
T  48652405 cccgtcttagtgcggtgtttatttgatttaggttgaaagat 48652365  T

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Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 345 - 385
Target Start/End: Original strand, 53962282 - 53962322
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||||||| || ||||||||||||||||||| ||||||    
T  53962282 cccgtcttagtgcggtgtttatttgattcaggttaaaagat 53962322  T

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Target: scaffold0432 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 345 - 383
Target Start/End: Complemental strand, 2377 - 2339
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaag 383  Q
    ||||||||||| || ||||||||||||||||||||||||    
T  2377 cccgtcttagtgcggtgtttatttgattcaggttgaaag 2339  T

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Target: scaffold0121 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 345 - 385
Target Start/End: Complemental strand, 13202 - 13162
Alignment:
Q  345 cccgtcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    |||||||||||  | ||||||||||||||||||||||||||    
T  13202 cccgtcttagtgaggtgtttatttgattcaggttgaaagat 13162  T

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Target: scaffold0056 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 349 - 385
Target Start/End: Original strand, 74332 - 74368
Alignment:
Q  349 tcttagtacgatgtttatttgattcaggttgaaagat 385  Q
    ||||||||||  |||||||||||||||||||||||||    
T  74332 tcttagtacggagtttatttgattcaggttgaaagat 74368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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