View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4952-Insertion-2 (Length: 369)

Name: NF4952-Insertion-2
Description: NF4952
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4952-Insertion-2
NF4952-Insertion-2
[»] chr3 (27 HSPs)
chr3 (7-365)||(4045343-4045700)
chr3 (30-204)||(4070637-4070811)
chr3 (275-341)||(40956663-40956729)
chr3 (275-369)||(24130584-24130678)
chr3 (275-364)||(6054201-6054290)
chr3 (275-332)||(17262281-17262338)
chr3 (275-326)||(3461699-3461750)
chr3 (278-365)||(42665904-42665991)
chr3 (299-365)||(3973331-3973397)
chr3 (275-365)||(3993683-3993773)
chr3 (299-365)||(3996479-3996545)
chr3 (276-330)||(47497142-47497196)
chr3 (296-365)||(31917865-31917933)
chr3 (275-359)||(54983683-54983765)
chr3 (293-365)||(19137648-19137720)
chr3 (290-365)||(26583130-26583206)
chr3 (290-365)||(28951895-28951970)
chr3 (275-329)||(4009994-4010048)
chr3 (314-360)||(9167286-9167332)
chr3 (275-332)||(36763493-36763551)
chr3 (207-264)||(4071538-4071594)
chr3 (276-364)||(8493259-8493345)
chr3 (280-329)||(21248971-21249020)
chr3 (293-329)||(32080120-32080156)
chr3 (293-365)||(34407084-34407156)
chr3 (285-368)||(38682246-38682327)
chr3 (276-332)||(40160797-40160853)
[»] chr1 (41 HSPs)
chr1 (7-365)||(13941348-13941706)
chr1 (275-361)||(9410304-9410389)
chr1 (293-365)||(9768803-9768875)
chr1 (290-365)||(42908800-42908875)
chr1 (275-365)||(35424169-35424259)
chr1 (275-365)||(50898726-50898815)
chr1 (293-365)||(11238022-11238094)
chr1 (293-365)||(41677089-41677161)
chr1 (275-330)||(195108-195163)
chr1 (275-330)||(50147588-50147643)
chr1 (275-341)||(9769556-9769622)
chr1 (275-337)||(19866532-19866594)
chr1 (275-341)||(40679838-40679904)
chr1 (275-360)||(1576097-1576182)
chr1 (275-332)||(16182871-16182928)
chr1 (293-365)||(2903021-2903093)
chr1 (293-365)||(50199470-50199542)
chr1 (290-329)||(23750215-23750254)
chr1 (275-365)||(23758228-23758319)
chr1 (275-365)||(43020640-43020730)
chr1 (275-324)||(39928310-39928359)
chr1 (293-365)||(1721169-1721241)
chr1 (293-365)||(3341730-3341802)
chr1 (293-341)||(9976378-9976426)
chr1 (275-365)||(7015662-7015753)
chr1 (275-365)||(11405485-11405573)
chr1 (293-364)||(27654999-27655070)
chr1 (293-368)||(41182800-41182874)
chr1 (291-329)||(8904319-8904357)
chr1 (296-365)||(12035336-12035403)
chr1 (275-341)||(33844670-33844736)
chr1 (275-341)||(33949242-33949308)
chr1 (275-341)||(48565123-48565189)
chr1 (292-365)||(4605836-4605908)
chr1 (293-365)||(12553222-12553295)
chr1 (296-365)||(17643008-17643074)
chr1 (280-364)||(24889170-24889255)
chr1 (280-329)||(32609233-32609282)
chr1 (293-365)||(18003845-18003917)
chr1 (290-365)||(37733784-37733857)
chr1 (293-341)||(48260183-48260231)
[»] chr8 (24 HSPs)
chr8 (275-365)||(35779784-35779872)
chr8 (275-362)||(220338-220425)
chr8 (275-362)||(689493-689580)
chr8 (275-362)||(733961-734048)
chr8 (275-362)||(857857-857944)
chr8 (280-369)||(42711185-42711274)
chr8 (278-341)||(25470825-25470888)
chr8 (275-365)||(33570407-33570495)
chr8 (275-369)||(216123-216217)
chr8 (275-369)||(692683-692777)
chr8 (275-369)||(696892-696986)
chr8 (275-369)||(729746-729840)
chr8 (275-369)||(853641-853735)
chr8 (276-327)||(11900632-11900683)
chr8 (290-365)||(14011029-14011104)
chr8 (275-329)||(36130514-36130568)
chr8 (293-365)||(22847256-22847328)
chr8 (293-368)||(26900445-26900518)
chr8 (275-365)||(13537289-13537377)
chr8 (275-365)||(13626837-13626925)
chr8 (278-332)||(12926457-12926511)
chr8 (275-333)||(39208845-39208903)
chr8 (292-365)||(7345457-7345530)
chr8 (293-365)||(43468701-43468771)
[»] chr7 (39 HSPs)
chr7 (276-365)||(24579263-24579352)
chr7 (275-365)||(43635617-43635707)
chr7 (281-369)||(38363184-38363272)
chr7 (275-365)||(11808067-11808158)
chr7 (275-365)||(10020445-10020535)
chr7 (275-341)||(23470477-23470543)
chr7 (279-329)||(38328547-38328597)
chr7 (280-368)||(8724406-8724492)
chr7 (293-365)||(23799329-23799401)
chr7 (291-365)||(7162660-7162734)
chr7 (275-337)||(35498454-35498516)
chr7 (291-341)||(38854000-38854050)
chr7 (275-369)||(42976576-42976670)
chr7 (275-365)||(43712289-43712379)
chr7 (280-365)||(2567813-2567898)
chr7 (276-365)||(32309125-32309214)
chr7 (276-365)||(35195872-35195961)
chr7 (293-365)||(45198094-45198164)
chr7 (296-355)||(27454050-27454107)
chr7 (293-365)||(5773158-5773232)
chr7 (278-361)||(13905970-13906053)
chr7 (296-343)||(19687282-19687329)
chr7 (290-329)||(44409265-44409304)
chr7 (275-365)||(7392282-7392372)
chr7 (275-365)||(16916486-16916576)
chr7 (295-341)||(21877668-21877714)
chr7 (275-365)||(27726345-27726435)
chr7 (275-365)||(36315950-36316040)
chr7 (275-365)||(39524717-39524806)
chr7 (276-365)||(3481146-3481234)
chr7 (275-331)||(17997716-17997770)
chr7 (292-365)||(19837304-19837377)
chr7 (279-332)||(25200634-25200687)
chr7 (293-330)||(26734265-26734302)
chr7 (316-365)||(31694099-31694148)
chr7 (280-365)||(37410462-37410547)
chr7 (275-360)||(41000794-41000879)
chr7 (281-365)||(44843721-44843802)
chr7 (301-365)||(24427392-24427456)
[»] chr5 (27 HSPs)
chr5 (296-365)||(38040295-38040363)
chr5 (291-368)||(13754032-13754107)
chr5 (293-365)||(27006369-27006441)
chr5 (290-369)||(6291021-6291099)
chr5 (275-330)||(29561712-29561767)
chr5 (278-341)||(40384304-40384367)
chr5 (293-365)||(31556847-31556919)
chr5 (293-369)||(38361510-38361586)
chr5 (290-365)||(13862154-13862228)
chr5 (275-365)||(42260696-42260786)
chr5 (275-365)||(42553117-42553206)
chr5 (276-365)||(10192868-10192956)
chr5 (275-320)||(18535988-18536033)
chr5 (280-329)||(22687862-22687911)
chr5 (293-365)||(7147013-7147085)
chr5 (293-341)||(22396982-22397030)
chr5 (275-330)||(4429207-4429262)
chr5 (278-365)||(11246473-11246560)
chr5 (290-365)||(38129004-38129079)
chr5 (280-365)||(9408933-9409016)
chr5 (275-365)||(28537164-28537254)
chr5 (303-369)||(31709967-31710032)
chr5 (276-329)||(14077233-14077286)
chr5 (276-365)||(37986844-37986933)
chr5 (293-330)||(41539378-41539415)
chr5 (290-365)||(9963445-9963518)
chr5 (293-341)||(10106683-10106731)
[»] chr4 (30 HSPs)
chr4 (280-365)||(1589139-1589223)
chr4 (294-365)||(36045859-36045930)
chr4 (275-365)||(49743391-49743481)
chr4 (293-365)||(33359846-33359918)
chr4 (310-365)||(9084788-9084843)
chr4 (275-365)||(11084227-11084318)
chr4 (275-365)||(20610768-20610858)
chr4 (296-365)||(54413974-54414042)
chr4 (280-360)||(47416502-47416582)
chr4 (275-330)||(9302634-9302689)
chr4 (275-365)||(35122073-35122164)
chr4 (275-329)||(4419662-4419716)
chr4 (275-341)||(6202656-6202722)
chr4 (275-365)||(35230271-35230361)
chr4 (314-360)||(43115302-43115348)
chr4 (275-341)||(55677158-55677224)
chr4 (277-329)||(12585537-12585589)
chr4 (290-330)||(21023343-21023383)
chr4 (293-341)||(49039439-49039487)
chr4 (296-367)||(32887158-32887229)
chr4 (290-365)||(55967607-55967682)
chr4 (279-341)||(47094116-47094178)
chr4 (275-320)||(21664152-21664197)
chr4 (275-320)||(21672916-21672961)
chr4 (293-365)||(37032175-37032245)
chr4 (278-365)||(31480300-31480385)
chr4 (278-365)||(32885717-32885802)
chr4 (281-368)||(34684594-34684679)
chr4 (290-365)||(41003165-41003237)
chr4 (293-365)||(41492493-41492564)
[»] chr2 (36 HSPs)
chr2 (293-365)||(45314439-45314511)
chr2 (280-369)||(1244594-1244683)
chr2 (290-365)||(17239930-17240003)
chr2 (275-345)||(38581582-38581652)
chr2 (304-365)||(44132568-44132629)
chr2 (292-368)||(2057507-2057581)
chr2 (293-365)||(22355112-22355184)
chr2 (293-365)||(37123215-37123287)
chr2 (275-346)||(33124341-33124412)
chr2 (275-365)||(25463242-25463332)
chr2 (276-330)||(36345158-36345212)
chr2 (276-349)||(42507333-42507406)
chr2 (293-365)||(44721700-44721770)
chr2 (293-369)||(12206523-12206599)
chr2 (293-365)||(14307688-14307760)
chr2 (275-331)||(29896137-29896193)
chr2 (310-357)||(1962863-1962910)
chr2 (278-329)||(17896883-17896934)
chr2 (290-364)||(2394964-2395037)
chr2 (310-368)||(3364751-3364809)
chr2 (275-325)||(23664038-23664088)
chr2 (275-365)||(36386090-36386179)
chr2 (275-341)||(39334857-39334923)
chr2 (275-341)||(44487743-44487809)
chr2 (296-365)||(4529760-4529829)
chr2 (293-365)||(9796926-9796996)
chr2 (324-365)||(11001758-11001799)
chr2 (293-365)||(11133105-11133175)
chr2 (290-331)||(22285165-22285206)
chr2 (292-341)||(25406643-25406692)
chr2 (304-365)||(34830616-34830676)
chr2 (278-330)||(407542-407594)
chr2 (281-365)||(18065283-18065367)
chr2 (290-365)||(25731963-25732039)
chr2 (298-369)||(36190079-36190151)
chr2 (295-359)||(41305062-41305126)
[»] chr6 (21 HSPs)
chr6 (296-369)||(14949016-14949090)
chr6 (275-330)||(26669635-26669690)
chr6 (279-341)||(3037569-3037631)
chr6 (275-365)||(4844172-4844262)
chr6 (276-365)||(32057063-32057150)
chr6 (293-365)||(30833046-30833118)
chr6 (293-364)||(7233995-7234066)
chr6 (290-369)||(29204860-29204939)
chr6 (292-365)||(1488117-1488190)
chr6 (292-337)||(16110985-16111030)
chr6 (293-365)||(19680242-19680314)
chr6 (293-331)||(20149973-20150011)
chr6 (293-331)||(22182821-22182859)
chr6 (275-320)||(3243890-3243935)
chr6 (281-341)||(15126295-15126353)
chr6 (278-341)||(8176049-8176113)
chr6 (278-341)||(9422886-9422950)
chr6 (290-330)||(12291234-12291274)
chr6 (275-331)||(17305580-17305635)
chr6 (293-341)||(29430297-29430345)
chr6 (293-365)||(34524904-34524976)
[»] scaffold0119 (1 HSPs)
scaffold0119 (275-330)||(1103-1158)
[»] scaffold0129 (1 HSPs)
scaffold0129 (293-365)||(7085-7157)
[»] scaffold0011 (1 HSPs)
scaffold0011 (292-338)||(19388-19434)
[»] scaffold1603 (1 HSPs)
scaffold1603 (291-364)||(630-703)
[»] scaffold0009 (1 HSPs)
scaffold0009 (293-341)||(62766-62814)


Alignment Details
Target: chr3 (Bit Score: 272; Significance: 1e-152; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 7 - 365
Target Start/End: Original strand, 4045343 - 4045700
Alignment:
Q  7 atataatttataaattgaagtagtcaagcaattccttcctggaagacaaagcaatgttatagctggaaaccagagaccgtgatttcagttgagttgctct 106  Q
    |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4045343 atataattcataaattgaagaagtcaagcaattccttcctggaagacaaagcaatgttatagctggaaaccagagaccgtgatttcagttgagttgctct 4045442  T
Q  107 ttgtcccctttcattctattcttggatttaccttatcacgggtagggttgcttcatcagttcaatcaatgtcacaaatcataaaacaaactcggactaac 206  Q
    | ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  4045443 t-gtcccctttcattctattcttggatttaccttatcacaggtggggttgcttcatcagttcaatcaatgtcacaaatcataaaacaaactcggattaac 4045541  T
Q  207 atagacattcaatgttacccttcaacaatgttacccatttattcattttaaaagataaannnnnnnnngtcaagtagtttaggggttagaattcaccttt 306  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||          ||||| | |||||| |||||||||||||||||    
T  4045542 ataaacattcaatgttacccttcaacaatgttacccatttattcattttaaaagataattttttttttgtcaactggtttagcggttagaattcaccttt 4045641  T
Q  307 ttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    |||||||||||||| |||||||||||||||||||| ||||||| |||||||||||||||    
T  4045642 ttcaagatgaataagtggggtgtccgaagttcgaacctcgacccctgcatataacaatg 4045700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 30 - 204
Target Start/End: Original strand, 4070637 - 4070811
Alignment:
Q  30 tcaagcaattccttcctggaagacaaagcaatgttatagctggaaaccagagaccgtgatttcagttgagttgctctttgtcccctttcattctattctt 129  Q
    |||||||||||||| ||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  4070637 tcaagcaattccttactggaagacaaagcattcttatagctggaaaccagagaccgtgatttcagttgagttgctctttgtcccctttcgttctattctt 4070736  T
Q  130 ggatttaccttatcacgggtagggttgcttcatcagttcaatcaatgtcacaaatcataaaacaaactcggacta 204  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  4070737 ggatttaccttatcacaggtggggttgcttcatcagttcaatcaatgtcacaaatcataaaacaaactcagacta 4070811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 275 - 341
Target Start/End: Original strand, 40956663 - 40956729
Alignment:
Q  275 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaa 341  Q
    |||||||||||||| ||||||||||||||||||| ||| |||||||||| ||||||||  |||||||    
T  40956663 gtcaagtagtttagtggttagaattcaccttttttaagctgaataaatgaggtgtccggggttcgaa 40956729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 275 - 369
Target Start/End: Complemental strand, 24130678 - 24130584
Alignment:
Q  275 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatg 369  Q
    |||||||||| ||| || ||| ||||| |||||||||| ||||||| |||||||||||  |||| || | || || |||||||||||||||||||    
T  24130678 gtcaagtagtctagtggctagtattcaactttttcaaggtgaataagtggggtgtccggggttcaaaccccgtcccctgcatataacaatgtatg 24130584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 275 - 364
Target Start/End: Original strand, 6054201 - 6054290
Alignment:
Q  275 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaat 364  Q
    ||||| |||| ||| ||||||||||||||||||||||| ||||||| || ||||| || ||||||||   ||||| |||||| |||||||    
T  6054201 gtcaaatagtctagtggttagaattcacctttttcaaggtgaataagtgaggtgttcggagttcgaactccgacctctgcatctaacaat 6054290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 275 - 332
Target Start/End: Complemental strand, 17262338 - 17262281
Alignment:
Q  275 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccg 332  Q
    |||||||||||||  | ||||||||||||||||||||| ||||||| |||||||||||    
T  17262338 gtcaagtagtttaatgattagaattcacctttttcaaggtgaataagtggggtgtccg 17262281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 275 - 326
Target Start/End: Original strand, 3461699 - 3461750
Alignment:
Q  275 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatgggg 326  Q
    |||||||||| ||| |||||||||||||||| ||||| ||||||||||||||    
T  3461699 gtcaagtagtctagcggttagaattcaccttattcaaaatgaataaatgggg 3461750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 278 - 365
Target Start/End: Original strand, 42665904 - 42665991
Alignment:
Q  278 aagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    ||||||| ||| | ||||||||||  ||||||||| ||||||| ||||||||||| ||||||||   ||||| |||||| ||||||||    
T  42665904 aagtagtctagtgattagaattcatttttttcaaggtgaataagtggggtgtccggagttcgaactccgacccctgcatttaacaatg 42665991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 299 - 365
Target Start/End: Complemental strand, 3973397 - 3973331
Alignment:
Q  299 tcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    ||||| |||||||| |||||||||||||||||||  |||| |||| || || |||||||||||||||    
T  3973397 tcaccattttcaaggtgaataaatggggtgtccggggttcaaatcgcggcccctgcatataacaatg 3973331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 275 - 365
Target Start/End: Original strand, 3993683 - 3993773
Alignment:
Q  275 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    |||||||||  ||| |||||||||||||| |||||||  || ||||||||||||||||  |||| || | || || |||||||||||||||    
T  3993683 gtcaagtagcctagtggttagaattcaccattttcaaagtgcataaatggggtgtccggggttcaaaccgcggcccctgcatataacaatg 3993773  T

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Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 299 - 365
Target Start/End: Original strand, 3996479 - 3996545
Alignment:
Q  299 tcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    ||||| |||||||| |||||||||||||||||||  |||| |||| || || |||||||||||||||    
T  3996479 tcaccattttcaaggtgaataaatggggtgtccggggttcaaatcgcggcccctgcatataacaatg 3996545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 276 - 330
Target Start/End: Complemental strand, 47497196 - 47497142
Alignment:
Q  276 tcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtc 330  Q
    ||||||||||||| ||||| ||||||||||||| ||| ||||||| |||||||||    
T  47497196 tcaagtagtttagtggttaaaattcaccttttttaaggtgaataagtggggtgtc 47497142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 296 - 365
Target Start/End: Original strand, 31917865 - 31917933
Alignment:
Q  296 aattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    |||| |||||||| ||| ||||||| |||||||||||||||||||| | ||||| || ||||||||||||    
T  31917865 aatttaccttttt-aaggtgaataagtggggtgtccgaagttcgaagcccgacctctacatataacaatg 31917933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 275 - 359
Target Start/End: Original strand, 54983683 - 54983765
Alignment:
Q  275 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatata 359  Q
    |||| ||||||||| || ||||||||||||| |  ||| |||||||||||||||||||  ||||||| | ||||| |||||||||    
T  54983683 gtcaggtagtttagtggctagaattcaccttat--aaggtgaataaatggggtgtccggggttcgaaccccgacccctgcatata 54983765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 365
Target Start/End: Complemental strand, 19137720 - 19137648
Alignment:
Q  293 tagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    |||||||| | |||||||||  |||||||||||||||| |  ||||||| |||| || |||||||||||||||    
T  19137720 tagaattctcttttttcaaggagaataaatggggtgtctggggttcgaacctcggcccctgcatataacaatg 19137648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 290 - 365
Target Start/End: Complemental strand, 26583206 - 26583130
Alignment:
Q  290 ggttagaattcacc-tttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    |||||||||||||  ||||| ||||||||||| || |||||||| |||||||| | ||||| |||||||||| ||||    
T  26583206 ggttagaattcactattttttaagatgaataattgaggtgtccgtagttcgaaccccgacccctgcatataataatg 26583130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 290 - 365
Target Start/End: Complemental strand, 28951970 - 28951895
Alignment:
Q  290 ggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    ||||||||||||| ||||||||| ||||||| |||||||| ||  ||||||| |  |||| |||||||||| ||||    
T  28951970 ggttagaattcacatttttcaaggtgaataagtggggtgttcggggttcgaaccctgacccctgcatataataatg 28951895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 329
Target Start/End: Original strand, 4009994 - 4010048
Alignment:
Q  275 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgt 329  Q
    |||||||||  ||| |||||||||||| | |||||||| ||||||||||||||||    
T  4009994 gtcaagtagcctagtggttagaattcaacattttcaaggtgaataaatggggtgt 4010048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 314 - 360
Target Start/End: Original strand, 9167286 - 9167332
Alignment:
Q  314 tgaataaatggggtgtccgaagttcgaatctcgaccactgcatataa 360  Q
    ||||||| |||||||||||||||||||| | ||||| ||||||||||    
T  9167286 tgaataactggggtgtccgaagttcgaaccccgacccctgcatataa 9167332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 332
Target Start/End: Complemental strand, 36763551 - 36763493
Alignment:
Q  275 gtcaagtagtttaggggttagaa-ttcacctttttcaagatgaataaatggggtgtccg 332  Q
    |||||||||| ||| || ||||| ||||||||||| ||||||||||| |||||||||||    
T  36763551 gtcaagtagtctagtggctagaaattcacctttttaaagatgaataagtggggtgtccg 36763493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 264
Target Start/End: Original strand, 4071538 - 4071594
Alignment:
Q  207 atagacattcaatgttacccttcaacaatgttacccatttattcattttaaaagataa 264  Q
    ||||||||| ||||||||||||||| ||||  || |||||||| ||||||||||||||    
T  4071538 atagacatt-aatgttacccttcaataatgacacacatttatttattttaaaagataa 4071594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 364
Target Start/End: Complemental strand, 8493345 - 8493259
Alignment:
Q  276 tcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaat 364  Q
    ||||||||||||   | |||||||||||||||  ||| ||||||| |  ||||| || |||||||||||||||| |||||||| |||||    
T  8493345 tcaagtagtttaatagctagaattcacctttt--aaggtgaataagtaaggtgttcggagttcgaatctcgacctctgcatattacaat 8493259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 329
Target Start/End: Original strand, 21248971 - 21249020
Alignment:
Q  280 gtagtttaggggttagaattcacctttttcaagatgaataaatggggtgt 329  Q
    ||||| ||| || |||||||||||||||||||| ||||||| ||||||||    
T  21248971 gtagtctagtggctagaattcacctttttcaaggtgaataagtggggtgt 21249020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 329
Target Start/End: Complemental strand, 32080156 - 32080120
Alignment:
Q  293 tagaattcacctttttcaagatgaataaatggggtgt 329  Q
    |||||||||||||||||||| ||||||| ||||||||    
T  32080156 tagaattcacctttttcaaggtgaataagtggggtgt 32080120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 365
Target Start/End: Original strand, 34407084 - 34407156
Alignment:
Q  293 tagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    ||||||||| | |||||||||||||||| ||||||||| |  ||||||| | | ||| |||||||||| ||||    
T  34407084 tagaattcatcattttcaagatgaataagtggggtgtctggggttcgaaccccaacccctgcatataataatg 34407156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 368
Target Start/End: Original strand, 38682246 - 38682327
Alignment:
Q  285 ttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtat 368  Q
    |||| |||||||||||||||| |  |||||||||||   |||||||||   |||||||| ||||| |||||||||| |||||||    
T  38682246 ttagtggttagaattcaccttat--aagatgaataaggagggtgtccgggattcgaatcccgacccctgcatataataatgtat 38682327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 276 - 332
Target Start/End: Complemental strand, 40160853 - 40160797
Alignment:
Q  276 tcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccg 332  Q
    ||||||||  ||| || |||||||||||||||| ||| ||||||| |||||||||||    
T  40160853 tcaagtagcctagtggctagaattcacctttttaaaggtgaataagtggggtgtccg 40160797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 269; Significance: 1e-150; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 7 - 365
Target Start/End: Complemental strand, 13941706 - 13941348
Alignment:
Q  7 atataatttataaattgaagtagtcaagcaattccttcctggaagacaaagcaatgttatagctggaaaccagagaccgtgatttcagttgagttgctct 106  Q
    |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13941706 atataattcataaattgaagaagtcaagcaattccttcctggaagacaaagcaatgttatagctggaaaccagagaccgtgatttcagttgagttgctct 13941607  T
Q  107 ttgtcccctttcattctattcttggatttaccttatcacgggtagggttgcttcatcagttcaatcaatgtcacaaatcataaaacaaactcggactaac 206  Q
    ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  13941606 ttgtcccctttcattctattcttggatttaccttatcacaggtggggttgcttcatcagttcaatcaatgtcacaaatcataaaacaaactcggattaac 13941507  T
Q  207 atagacattcaatgttacccttcaacaatgttacccatttattcattt---taaaagataaannnnnnnnngtcaagtagtttaggggttagaattcacc 303  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||          |||||||||||||| |||||||||||||     
T  13941506 atagacattcaatgttacccttcaacaatgttacccatttattcattttaataaaagataa---tttttttgtcaagtagtttagtggttagaattcact 13941410  T
Q  304 tttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    ||||||||||||||||| |||||||||||||||||||| ||||| | |||||||||||||||    
T  13941409 tttttcaagatgaataagtggggtgtccgaagttcgaacctcgaaccctgcatataacaatg 13941348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 275 - 361
Target Start/End: Original strand, 9410304 - 9410389
Alignment:
Q  275 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataac 361  Q
    ||||||||||||||  |||| ||||||||||||||||||||||||| ||||||||| || ||||||||||| ||| |||||||||||    
T  9410304 gtcaagtagtttagtagttaaaattcacctttttcaagatgaataagtggggtgtctgaggttcgaatctcaacc-ctgcatataac 9410389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 293 - 365
Target Start/End: Original strand, 9768803 - 9768875
Alignment:
Q  293 tagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    |||||||||||||||||||| ||||||| |||||||||||  ||||||| | ||||| |||||||||||||||    
T  9768803 tagaattcacctttttcaaggtgaataagtggggtgtccggggttcgaaccccgacccctgcatataacaatg 9768875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 290 - 365
Target Start/End: Complemental strand, 42908875 - 42908800
Alignment:
Q  290 ggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    ||||||||||| |||||||||||| |||||| |||||| |||| |||||||| | ||||| |||||||||||||||    
T  42908875 ggttagaattctcctttttcaagaagaataagtggggtatccggagttcgaaccccgacccctgcatataacaatg 42908800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 275 - 365
Target Start/End: Complemental strand, 35424259 - 35424169
Alignment:
Q  275 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    |||||||||| ||| || ||||||||| |||||||||| |||||||||||||| ||||  |||||||||||  ||  ||||||||||||||    
T  35424259 gtcaagtagtctagtggctagaattcatctttttcaaggtgaataaatggggtatccggggttcgaatctcagcccatgcatataacaatg 35424169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 275 - 365
Target Start/End: Original strand, 50898726 - 50898815
Alignment:
Q  275 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    ||||| |||||||| ||||||||||||||||||| ||||||||| ||||||||||| |  |||||||||  |||  |||||||||||||||    
T  50898726 gtcaaatagtttagtggttagaattcacctttttaaagatgaat-aatggggtgtctggggttcgaatccagactcctgcatataacaatg 50898815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 293 - 365
Target Start/End: Original strand, 11238022 - 11238094
Alignment:
Q  293 tagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    |||||||||||||||||||||||||||| |||||||||||   |||||| | ||||| |||||||||| ||||    
T  11238022 tagaattcacctttttcaagatgaataagtggggtgtccgggattcgaaccccgacccctgcatataataatg 11238094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 293 - 365
Target Start/End: Complemental strand, 41677161 - 41677089
Alignment:
Q  293 tagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    |||||||||||||||||||| ||||||| ||||||||||| |||||||| | ||||| | |||||||| ||||    
T  41677161 tagaattcacctttttcaaggtgaataagtggggtgtccggagttcgaaccccgacccccgcatataataatg 41677089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 275 - 330
Target Start/End: Complemental strand, 195163 - 195108
Alignment:
Q  275 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtc 330  Q
    ||||||||| |||| ||||||||||||||||||||||| ||||||| |||||||||    
T  195163 gtcaagtagcttagtggttagaattcacctttttcaaggtgaataagtggggtgtc 195108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 275 - 330
Target Start/End: Complemental strand, 50147643 - 50147588
Alignment:
Q  275 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtc 330  Q
    |||||||||||||| ||||||||||||| ||||| ||| |||||||||||||||||    
T  50147643 gtcaagtagtttagtggttagaattcactttttttaaggtgaataaatggggtgtc 50147588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 275 - 341
Target Start/End: Original strand, 9769556 - 9769622
Alignment:
Q  275 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaa 341  Q
    |||| |||| |||| ||||||||||||||||||||||| ||||||| |||||||||||  |||||||    
T  9769556 gtcaggtagcttagtggttagaattcacctttttcaaggtgaataagtggggtgtccggggttcgaa 9769622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 19866594 - 19866532
Alignment:
Q  275 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagtt 337  Q
    |||||||||||||| || |||||||||||||||| ||| ||||||| ||||||||||| ||||    
T  19866594 gtcaagtagtttagtggctagaattcaccttttttaaggtgaataagtggggtgtccggagtt 19866532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 275 - 341
Target Start/End: Complemental strand, 40679904 - 40679838
Alignment:
Q  275 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaa 341  Q
    |||| ||||||||| ||||||||||| ||||||| |||  |||||| ||||||||||||||||||||    
T  40679904 gtcaggtagtttagaggttagaattctccttttttaaggagaataagtggggtgtccgaagttcgaa 40679838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 275 - 360
Target Start/End: Original strand, 1576097 - 1576182
Alignment:
Q  275 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataa 360  Q
    |||||||||||||| | ||||||||||| ||||||||| | ||||| |||||||||||  ||| ||||| || || ||||||||||    
T  1576097 gtcaagtagtttagtgattagaattcacttttttcaaggtaaataagtggggtgtccggggtttgaatcccggcccctgcatataa 1576182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 275 - 332
Target Start/End: Complemental strand, 16182928 - 16182871
Alignment:
Q  275 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccg 332  Q
    |||||||| ||||| ||||||||||||  ||||||||||||||||| |||||||||||    
T  16182928 gtcaagtaatttagtggttagaattcatatttttcaagatgaataagtggggtgtccg 16182871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 293 - 365
Target Start/End: Original strand, 2903021 - 2903093
Alignment:
Q  293 tagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    |||||||| ||||||||||| ||||||| |||||||| ||  ||||||| | ||||| |||||||||||||||    
T  2903021 tagaattctcctttttcaaggtgaataagtggggtgttcggggttcgaaccccgacctctgcatataacaatg 2903093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 293 - 365
Target Start/End: Original strand, 50199470 - 50199542
Alignment:
Q  293 tagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    ||||||| |||||||||||| ||||||| |||||||||||  ||||||| | || || |||||||||||||||    
T  50199470 tagaattgacctttttcaaggtgaataagtggggtgtccggggttcgaaccccggcccctgcatataacaatg 50199542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 290 - 329
Target Start/End: Complemental strand, 23750254 - 23750215
Alignment:
Q  290 ggttagaattcacctttttcaagatgaataaatggggtgt 329  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  23750254 ggttagaattcacctttttcaagatgaataagtggggtgt 23750215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 275 - 365
Target Start/End: Original strand, 23758228 - 23758319
Alignment:
Q  275 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaa-tggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    |||||||||| ||| |||||||||||||  |||| |||||||||||| |||||||| ||  ||||||| ||| ||| |||||||||| ||||    
T  23758228 gtcaagtagtctagtggttagaattcacaatttttaagatgaataaagtggggtgttcggggttcgaacctcaacccctgcatataataatg 23758319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 275 - 365
Target Start/End: Complemental strand, 43020730 - 43020640
Alignment:
Q  275 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    |||||||||  ||| || |||||||||| ||||||||| ||||| | |||||||||||| ||||||| | | ||| |||||||||| ||||    
T  43020730 gtcaagtagcgtagtggctagaattcacatttttcaaggtgaatgagtggggtgtccgaggttcgaaccccaacccctgcatataataatg 43020640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 275 - 324
Target Start/End: Complemental strand, 39928359 - 39928310
Alignment:
Q  275 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatgg 324  Q
    |||| ||||||||| ||||||||||||||||||| |||||||| ||||||    
T  39928359 gtcaggtagtttagtggttagaattcaccttttttaagatgaaaaaatgg 39928310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 365
Target Start/End: Complemental strand, 1721241 - 1721169
Alignment:
Q  293 tagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    |||||||||||||||| ||| ||||||| || ||||||||  ||||||| | || || |||||||||||||||    
T  1721241 tagaattcaccttttttaaggtgaataagtgaggtgtccggggttcgaaacccggcccctgcatataacaatg 1721169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 365
Target Start/End: Original strand, 3341730 - 3341802
Alignment:
Q  293 tagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    |||||||||||||||||||| ||||||| |||||||||||  ||||||  | || || |||||||||| ||||    
T  3341730 tagaattcacctttttcaaggtgaataagtggggtgtccggggttcgatccccggcccctgcatataataatg 3341802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 341
Target Start/End: Original strand, 9976378 - 9976426
Alignment:
Q  293 tagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaa 341  Q
    |||||||||| ||||||||| ||||||| ||||||||||| ||||||||    
T  9976378 tagaattcacttttttcaaggtgaataagtggggtgtccggagttcgaa 9976426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 275 - 365
Target Start/End: Original strand, 7015662 - 7015753
Alignment:
Q  275 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaa-tggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    |||||||| ||||| ||||| ||||||| ||||||||| ||||| || |||||||| || |||||||| |||  || || ||||||||||||    
T  7015662 gtcaagtaatttagtggttaaaattcacatttttcaaggtgaattaagtggggtgttcggagttcgaacctcagcccctacatataacaatg 7015753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 275 - 365
Target Start/End: Complemental strand, 11405573 - 11405485
Alignment:
Q  275 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    |||| |||| |||| || ||||||||||||| |  ||| ||||||| |||||||||||  ||||||| | ||||| |||||||||||||||    
T  11405573 gtcaggtagcttagtggctagaattcaccttat--aaggtgaataagtggggtgtccggggttcgaaccccgacccctgcatataacaatg 11405485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 293 - 364
Target Start/End: Original strand, 27654999 - 27655070
Alignment:
Q  293 tagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaat 364  Q
    |||||||||||||||||||| ||||||| ||||||||| |  ||||| |||  |||| ||| ||||||||||    
T  27654999 tagaattcacctttttcaaggtgaataagtggggtgtctggggttcgtatccagacctctgtatataacaat 27655070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 293 - 368
Target Start/End: Complemental strand, 41182874 - 41182800
Alignment:
Q  293 tagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtat 368  Q
    |||||||||||||||  ||| ||||||| |||||||||||  |||| || | ||||| ||||||||||||||||||    
T  41182874 tagaattcaccttttcaaag-tgaataagtggggtgtccggggttcaaaccccgacccctgcatataacaatgtat 41182800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 291 - 329
Target Start/End: Complemental strand, 8904357 - 8904319
Alignment:
Q  291 gttagaattcacctttttcaagatgaataaatggggtgt 329  Q
    ||||||||||||||||||||| |||||||| ||||||||    
T  8904357 gttagaattcacctttttcaaaatgaataagtggggtgt 8904319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 296 - 365
Target Start/End: Original strand, 12035336 - 12035403
Alignment:
Q  296 aattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    ||||||||||||||||| |||| |||||||  ||||||  |||||| ||||||| |||||||||| ||||    
T  12035336 aattcacctttttcaaggtgaaaaaatggg--gtccgagattcgaacctcgacccctgcatataataatg 12035403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 341
Target Start/End: Complemental strand, 33844736 - 33844670
Alignment:
Q  275 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaa 341  Q
    |||||||||| ||| || || ||||||||||||||||  ||||||| |||||||||||  |||||||    
T  33844736 gtcaagtagtctagtggctataattcacctttttcaaagtgaataagtggggtgtccggggttcgaa 33844670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 341
Target Start/End: Original strand, 33949242 - 33949308
Alignment:
Q  275 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaa 341  Q
    |||||||||| ||| || || ||||||||||||||||  ||||||| |||||||||||  |||||||    
T  33949242 gtcaagtagtctagtggctataattcacctttttcaaagtgaataagtggggtgtccggggttcgaa 33949308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 341
Target Start/End: Original strand, 48565123 - 48565189
Alignment:
Q  275 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaa 341  Q
    ||||||||| |||| |  |||||||||||||||||||  | ||||| |||||||||||| |||||||    
T  48565123 gtcaagtagcttagtgtctagaattcacctttttcaaagtaaataagtggggtgtccgaggttcgaa 48565189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 365
Target Start/End: Original strand, 4605836 - 4605908
Alignment:
Q  292 ttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    ||||||||||||||||| ||| |||||||||| |||||| || ||| ||| || | || |||||||||||||||    
T  4605836 ttagaattcaccttttttaaggtgaataaatgaggtgtctgaggtttgaa-cttggcccctgcatataacaatg 4605908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 365
Target Start/End: Complemental strand, 12553295 - 12553222
Alignment:
Q  293 tagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaa-tctcgaccactgcatataacaatg 365  Q
    |||||||||||||||||||  ||||||| |||||||||||  |||||||  | || || |||||||||||||||    
T  12553295 tagaattcacctttttcaaagtgaataagtggggtgtccggggttcgaacccccggcccctgcatataacaatg 12553222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 365
Target Start/End: Original strand, 17643008 - 17643074
Alignment:
Q  296 aattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    ||||||||||||| ||||||||||||||   ||||||| ||||||||||||||  |||||||||||||||    
T  17643008 aattcaccttttt-aagatgaataaatgaa-tgtccga-gttcgaatctcgactcctgcatataacaatg 17643074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 364
Target Start/End: Complemental strand, 24889255 - 24889170
Alignment:
Q  280 gtagtttaggggtt-agaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaat 364  Q
    ||||||||| |||| | ||||||||||||||||  ||||||| |||||||| || |||||||| |||| ||  || ||||||||||    
T  24889255 gtagtttagtggtttaaaattcacctttttcaaagtgaataagtggggtgttcggagttcgaacctcggcccttgtatataacaat 24889170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 329
Target Start/End: Original strand, 32609233 - 32609282
Alignment:
Q  280 gtagtttaggggttagaattcacctttttcaagatgaataaatggggtgt 329  Q
    ||||| ||| |||||||||||| ||||||||||  |||||||||||||||    
T  32609233 gtagtctagtggttagaattcatctttttcaaggcgaataaatggggtgt 32609282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 365
Target Start/End: Complemental strand, 18003917 - 18003845
Alignment:
Q  293 tagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    ||||||||||||||||| || ||||||| |||||||| ||  | ||||| | || || |||||||||||||||    
T  18003917 tagaattcacctttttccaggtgaataagtggggtgttcggggctcgaaccccggcccctgcatataacaatg 18003845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 290 - 365
Target Start/End: Complemental strand, 37733857 - 37733784
Alignment:
Q  290 ggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    |||||||||||||||| |  ||| ||||||| |||||||||||  ||||||| | || ||||||||||||| ||||    
T  37733857 ggttagaattcaccttat--aaggtgaataagtggggtgtccggggttcgaaccccgtccactgcatataataatg 37733784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 341
Target Start/End: Original strand, 48260183 - 48260231
Alignment:
Q  293 tagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaa 341  Q
    |||||||||| ||||||||| ||||||| |||||||||||  |||||||    
T  48260183 tagaattcacatttttcaaggtgaataagtggggtgtccggggttcgaa 48260231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 48; Significance: 2e-18; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 275 - 365
Target Start/End: Complemental strand, 35779872 - 35779784
Alignment:
Q  275 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    |||||||||||||| || ||||||||| |||||||||||||||||| |||||||||| | ||||||| | ||||  |||||||||||||||    
T  35779872 gtcaagtagtttagaggctagaattcatctttttcaagatgaataagtggggtgtcctaggttcgaaccccgac--ctgcatataacaatg 35779784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 275 - 362
Target Start/End: Original strand, 220338 - 220425
Alignment:
Q  275 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataaca 362  Q
    |||||||||| ||| ||||||||||||||||||||||| ||||||| |||||||||||   |||||| |  |||| ||||||||||||    
T  220338 gtcaagtagtctagtggttagaattcacctttttcaaggtgaataagtggggtgtccgggattcgaaccctgacctctgcatataaca 220425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 275 - 362
Target Start/End: Original strand, 689493 - 689580
Alignment:
Q  275 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataaca 362  Q
    |||||||||| ||| ||||||||||||||||||||||| ||||||| |||||||||||   |||||| |  |||| ||||||||||||    
T  689493 gtcaagtagtctagtggttagaattcacctttttcaaggtgaataagtggggtgtccgggattcgaaccctgacctctgcatataaca 689580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 275 - 362
Target Start/End: Original strand, 733961 - 734048
Alignment:
Q  275 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataaca 362  Q
    |||||||||| ||| ||||||||||||||||||||||| ||||||| |||||||||||   |||||| |  |||| ||||||||||||    
T  733961 gtcaagtagtctagtggttagaattcacctttttcaaggtgaataagtggggtgtccgggattcgaaccctgacctctgcatataaca 734048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 275 - 362
Target Start/End: Original strand, 857857 - 857944
Alignment:
Q  275 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataaca 362  Q
    |||||||||| ||| ||||||||||||||||||||||| ||||||| |||||||||||   |||||| |  |||| ||||||||||||    
T  857857 gtcaagtagtctagtggttagaattcacctttttcaaggtgaataagtggggtgtccgggattcgaaccctgacctctgcatataaca 857944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 280 - 369
Target Start/End: Complemental strand, 42711274 - 42711185
Alignment:
Q  280 gtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatg 369  Q
    ||||||||| ||||||||||||| |||||||||   ||||| |||| |||||| ||||| ||||  |||| |||||||||||||||||||    
T  42711274 gtagtttagtggttagaattcacatttttcaaggcaaataagtgggatgtccggagttcaaatcctgacccctgcatataacaatgtatg 42711185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 278 - 341
Target Start/End: Original strand, 25470825 - 25470888
Alignment:
Q  278 aagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaa 341  Q
    ||||||| ||| || ||||||||||||| |||||| |||||||||||||||||||| |||||||    
T  25470825 aagtagtctagtggctagaattcaccttcttcaaggtgaataaatggggtgtccgaggttcgaa 25470888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 275 - 365
Target Start/End: Original strand, 33570407 - 33570495
Alignment:
Q  275 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    |||||||||||||| || ||||||||||||| |  ||| ||||||| |||||||||||| ||||||| | |||||  ||||||||||||||    
T  33570407 gtcaagtagtttagtggctagaattcaccttat--aaggtgaataagtggggtgtccgaggttcgaaccccgacccatgcatataacaatg 33570495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 275 - 369
Target Start/End: Original strand, 216123 - 216217
Alignment:
Q  275 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatg 369  Q
    |||| ||||| ||| |||||| |||||||||||||||| ||||||| || ||||||||   |||||| |  |||| |||||||||||||||||||    
T  216123 gtcaggtagtctagtggttagtattcacctttttcaaggtgaataagtgaggtgtccgtgattcgaaccctgacctctgcatataacaatgtatg 216217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 275 - 369
Target Start/End: Original strand, 692683 - 692777
Alignment:
Q  275 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatg 369  Q
    |||| ||||| ||| |||||| |||||||||||||||| ||||||| || ||||||||   |||||| |  |||| |||||||||||||||||||    
T  692683 gtcaggtagtctagtggttagtattcacctttttcaaggtgaataagtgaggtgtccgtgattcgaaccctgacctctgcatataacaatgtatg 692777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 275 - 369
Target Start/End: Original strand, 696892 - 696986
Alignment:
Q  275 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatg 369  Q
    |||| ||||| ||| |||||| |||||||||||||||| ||||||| || ||||||||   |||||| |  |||| |||||||||||||||||||    
T  696892 gtcaggtagtctagtggttagtattcacctttttcaaggtgaataagtgaggtgtccgtgattcgaaccctgacctctgcatataacaatgtatg 696986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 275 - 369
Target Start/End: Original strand, 729746 - 729840
Alignment:
Q  275 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatg 369  Q
    |||| ||||| ||| |||||| |||||||||||||||| ||||||| || ||||||||   |||||| |  |||| |||||||||||||||||||    
T  729746 gtcaggtagtctagtggttagtattcacctttttcaaggtgaataagtgaggtgtccgtgattcgaaccctgacctctgcatataacaatgtatg 729840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 275 - 369
Target Start/End: Original strand, 853641 - 853735
Alignment:
Q  275 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatg 369  Q
    |||| ||||| ||| |||||| |||||||||||||||| ||||||| || ||||||||   |||||| |  |||| |||||||||||||||||||    
T  853641 gtcaggtagtctagtggttagtattcacctttttcaaggtgaataagtgaggtgtccgtgattcgaaccctgacctctgcatataacaatgtatg 853735  T

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Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 276 - 327
Target Start/End: Complemental strand, 11900683 - 11900632
Alignment:
Q  276 tcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggt 327  Q
    |||| |||||||| || |||||||||||||||||||||||||||| ||||||    
T  11900683 tcaaatagtttagtggctagaattcacctttttcaagatgaataagtggggt 11900632  T

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Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 290 - 365
Target Start/End: Original strand, 14011029 - 14011104
Alignment:
Q  290 ggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    ||||||||||||| ||||| ||||||||||| |||| ||||||| |||||||   || || |||||||||||||||    
T  14011029 ggttagaattcacattttttaagatgaataagtgggatgtccgaggttcgaactccggcccctgcatataacaatg 14011104  T

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Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 275 - 329
Target Start/End: Original strand, 36130514 - 36130568
Alignment:
Q  275 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgt 329  Q
    ||||| |||||||| |||||||||||| ||||| |||| ||||||||||||||||    
T  36130514 gtcaaatagtttagtggttagaattcagcttttgcaagctgaataaatggggtgt 36130568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 365
Target Start/End: Original strand, 22847256 - 22847328
Alignment:
Q  293 tagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    |||||||||||||||| ||| ||||||| || |||||  |  ||||||| ||||||| |||||||||||||||    
T  22847256 tagaattcaccttttttaaggtgaataagtgaggtgtgtggggttcgaacctcgacccctgcatataacaatg 22847328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 368
Target Start/End: Complemental strand, 26900518 - 26900445
Alignment:
Q  293 tagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtat 368  Q
    |||||||||||||||  |||||||||||||||||||||||| ||| ||| ||| | | ||  ||||||||||||||    
T  26900518 tagaattcacctttt--aagatgaataaatggggtgtccgaggtttgaacctcaatccctatatataacaatgtat 26900445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 275 - 365
Target Start/End: Original strand, 13537289 - 13537377
Alignment:
Q  275 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    |||||||||||||| || || |||||||||| |  ||||||||||| ||||||||| |  ||||||| | ||||  |||||||||||||||    
T  13537289 gtcaagtagtttagtggctacaattcaccttat--aagatgaataagtggggtgtctggggttcgaaccccgacacctgcatataacaatg 13537377  T

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Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 275 - 365
Target Start/End: Original strand, 13626837 - 13626925
Alignment:
Q  275 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    |||||||||||||| || || |||||||||| |  ||||||||||| ||||||||| |  ||||||| | ||||  |||||||||||||||    
T  13626837 gtcaagtagtttagtggctacaattcaccttat--aagatgaataagtggggtgtctggggttcgaaccccgacacctgcatataacaatg 13626925  T

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Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 332
Target Start/End: Original strand, 12926457 - 12926511
Alignment:
Q  278 aagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccg 332  Q
    ||||||| ||| || ||||||| |||||||||||||||||||| || ||||||||    
T  12926457 aagtagtctagtggctagaatttacctttttcaagatgaataagtgaggtgtccg 12926511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 333
Target Start/End: Original strand, 39208845 - 39208903
Alignment:
Q  275 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccga 333  Q
    |||||||||| ||| || |||||||||||||||| ||| ||||||| || |||||||||    
T  39208845 gtcaagtagtctagtggctagaattcacctttttaaaggtgaataagtgaggtgtccga 39208903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 365
Target Start/End: Complemental strand, 7345530 - 7345457
Alignment:
Q  292 ttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    ||||||||||||||||| ||| ||||||| ||||||||  | |||| ||| | ||||| |||||||||| ||||    
T  7345530 ttagaattcaccttttttaaggtgaataagtggggtgtttggagttggaagcccgacccctgcatataataatg 7345457  T

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Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 365
Target Start/End: Original strand, 43468701 - 43468771
Alignment:
Q  293 tagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    ||||||||||||| |  ||| ||||||| ||||||||||| |||||||| | ||||| || ||||||||||||    
T  43468701 tagaattcaccttat--aaggtgaataagtggggtgtccggagttcgaaccccgacccctacatataacaatg 43468771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 4e-17; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 276 - 365
Target Start/End: Original strand, 24579263 - 24579352
Alignment:
Q  276 tcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    ||||||||||||| || |||||||||||||||||||| ||||||| ||||||||| |  |||||||||||  || |||||||||| ||||    
T  24579263 tcaagtagtttagtggatagaattcacctttttcaaggtgaataagtggggtgtctggggttcgaatctcatcccctgcatataataatg 24579352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 275 - 365
Target Start/End: Complemental strand, 43635707 - 43635617
Alignment:
Q  275 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    |||||||||||||| || ||||||||||| |||  ||| ||||||| |||||||||||  ||||||| | ||||| |||||||||||||||    
T  43635707 gtcaagtagtttagtggctagaattcaccctttgtaaggtgaataagtggggtgtccggggttcgaaccccgaccgctgcatataacaatg 43635617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 281 - 369
Target Start/End: Complemental strand, 38363272 - 38363184
Alignment:
Q  281 tagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatg 369  Q
    |||| ||| ||||||||||||||||||| |||||||||||||| ||||| || | ||||||  ||| ||  ||||||||||||||||||    
T  38363272 tagtctagtggttagaattcaccttttttaagatgaataaatgaggtgttcggaattcgaacatcggcccttgcatataacaatgtatg 38363184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 275 - 365
Target Start/End: Complemental strand, 11808158 - 11808067
Alignment:
Q  275 gtcaagtagtttaggggttagaattcacctttttc-aagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    |||||||||| |||  |||||||||||| |||||| ||| ||||||| |||||||||||  ||||||| | ||||| |||||||||||||||    
T  11808158 gtcaagtagtctagttgttagaattcacgtttttctaaggtgaataagtggggtgtccggggttcgaaccccgacccctgcatataacaatg 11808067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 275 - 365
Target Start/End: Original strand, 10020445 - 10020535
Alignment:
Q  275 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    |||||||||  ||| || |||||||||||||||||||||||||||| |||| ||| ||  ||||||| | | ||| |||||||||||||||    
T  10020445 gtcaagtaggctagtgggtagaattcacctttttcaagatgaataagtgggttgttcggggttcgaaccccaacccctgcatataacaatg 10020535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 275 - 341
Target Start/End: Original strand, 23470477 - 23470543
Alignment:
Q  275 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaa 341  Q
    |||| ||||| ||| |||||||| ||||||||||||||||||||||||||| ||||||  |||||||    
T  23470477 gtcaggtagtctagtggttagaactcacctttttcaagatgaataaatgggatgtccggggttcgaa 23470543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 279 - 329
Target Start/End: Original strand, 38328547 - 38328597
Alignment:
Q  279 agtagtttaggggttagaattcacctttttcaagatgaataaatggggtgt 329  Q
    |||||||||| |||||||||| |||||||||||| ||||||||||||||||    
T  38328547 agtagtttagtggttagaattaacctttttcaaggtgaataaatggggtgt 38328597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 280 - 368
Target Start/End: Complemental strand, 8724492 - 8724406
Alignment:
Q  280 gtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtat 368  Q
    ||||||||| | |||||||||||||| |  ||| ||||||| |||||||||||| |||||| || ||||| |||||||||| |||||||    
T  8724492 gtagtttagtgattagaattcaccttat--aaggtgaataagtggggtgtccgaggttcgattcccgacctctgcatataataatgtat 8724406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 293 - 365
Target Start/End: Complemental strand, 23799401 - 23799329
Alignment:
Q  293 tagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    ||||||| |||||||| ||   |||||| |||||||||||| ||||||||| ||||| |||||||||||||||    
T  23799401 tagaattaaccttttttaaagagaataagtggggtgtccgaggttcgaatcccgacccctgcatataacaatg 23799329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 291 - 365
Target Start/End: Original strand, 7162660 - 7162734
Alignment:
Q  291 gttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    |||||||||||||||||||||||||||||| |||  | | |  |||||||| | ||||| |||||||||||||||    
T  7162660 gttagaattcacctttttcaagatgaataagtggaatattcagagttcgaaccccgacccctgcatataacaatg 7162734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 35498516 - 35498454
Alignment:
Q  275 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagtt 337  Q
    |||||||| | ||| || |||||||||||||||||||  ||||||| ||||||||||||||||    
T  35498516 gtcaagtaatatagtggctagaattcacctttttcaaagtgaataagtggggtgtccgaagtt 35498454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 291 - 341
Target Start/End: Original strand, 38854000 - 38854050
Alignment:
Q  291 gttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaa 341  Q
    ||||||||||||||||| |||||| ||||||||||||||| | ||||||||    
T  38854000 gttagaattcaccttttacaagataaataaatggggtgtctggagttcgaa 38854050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 275 - 369
Target Start/End: Original strand, 42976576 - 42976670
Alignment:
Q  275 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatg 369  Q
    |||||||||| |||  | |||||||||||||||| ||  ||||||| ||| ||||||| |||||||| ||||| | || | ||||||||||||||    
T  42976576 gtcaagtagtctagtaggtagaattcaccttttttaaagtgaataagtggagtgtccgtagttcgaacctcgatccctacctataacaatgtatg 42976670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 275 - 365
Target Start/End: Original strand, 43712289 - 43712379
Alignment:
Q  275 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    |||| ||||||||| || |||||||| |||||||||||  | |||| |||||| ||||| ||||||| | ||||| ||| |||||||||||    
T  43712289 gtcaggtagtttagtggctagaattctcctttttcaaggaggataagtggggtatccgaggttcgaaccccgacccctgtatataacaatg 43712379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 280 - 365
Target Start/End: Original strand, 2567813 - 2567898
Alignment:
Q  280 gtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    ||||| ||| ||||||||||||||||||||||| | ||||| ||||||| |||  ||||||| | || || |||||||||| ||||    
T  2567813 gtagtctagtggttagaattcacctttttcaaggttaataagtggggtgaccggggttcgaaccccggcccctgcatataaaaatg 2567898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 276 - 365
Target Start/End: Original strand, 32309125 - 32309214
Alignment:
Q  276 tcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    ||||||||| ||| || |||||||||| ||||| ||| ||||||| ||||||||| ||  ||||||   ||||| |||||||||||||||    
T  32309125 tcaagtagtctagtggctagaattcacattttttaaggtgaataactggggtgtctgagattcgaactccgacccctgcatataacaatg 32309214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 276 - 365
Target Start/End: Complemental strand, 35195961 - 35195872
Alignment:
Q  276 tcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    ||||||| ||||| |  ||||| |||||||||||||| |||||||||||||||| ||  ||||||| | || || |||||||||| ||||    
T  35195961 tcaagtaatttagtgactagaagtcacctttttcaaggtgaataaatggggtgttcggggttcgaaccccggcccctgcatataataatg 35195872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 293 - 365
Target Start/End: Original strand, 45198094 - 45198164
Alignment:
Q  293 tagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    ||||||||||||| |  ||| |||||||||||||||||||  ||||||||||| | |||||||||||| ||||    
T  45198094 tagaattcaccttat--aaggtgaataaatggggtgtccggggttcgaatctcaatcactgcatataataatg 45198164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 355
Target Start/End: Complemental strand, 27454107 - 27454050
Alignment:
Q  296 aattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgca 355  Q
    ||||||||||||  ||||||||||| |||||||||||| ||||||| ||||||| |||||    
T  27454107 aattcacctttt--aagatgaataagtggggtgtccgaggttcgaacctcgacccctgca 27454050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 293 - 365
Target Start/End: Complemental strand, 5773232 - 5773158
Alignment:
Q  293 tagaattcacctttttcaagatgaataaatggg--gtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    |||||| ||||||||||||| ||||||| ||||  |||||||  ||||||| ||||||| || ||||||||||||    
T  5773232 tagaatccacctttttcaaggtgaataagtgggatgtgtccggggttcgaacctcgacccctacatataacaatg 5773158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 278 - 361
Target Start/End: Complemental strand, 13906053 - 13905970
Alignment:
Q  278 aagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataac 361  Q
    ||||||||||| |||||||||||| |||||| ||  | ||||| |||||||| || ||||||||  || ||| |||||||||||    
T  13906053 aagtagtttagtggttagaattcaacttttttaaagtaaataagtggggtgttcggagttcgaacatcaacccctgcatataac 13905970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 343
Target Start/End: Original strand, 19687282 - 19687329
Alignment:
Q  296 aattcacctttttcaagatgaataaatggggtgtccgaagttcgaatc 343  Q
    ||||||| ||||||||||||||||| ||||||||||| | ||||||||    
T  19687282 aattcacttttttcaagatgaataagtggggtgtccggaattcgaatc 19687329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 290 - 329
Target Start/End: Complemental strand, 44409304 - 44409265
Alignment:
Q  290 ggttagaattcacctttttcaagatgaataaatggggtgt 329  Q
    ||||||||||||||||||||||| ||||||| ||||||||    
T  44409304 ggttagaattcacctttttcaaggtgaataagtggggtgt 44409265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 365
Target Start/End: Original strand, 7392282 - 7392372
Alignment:
Q  275 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    |||||||||||||| || || ||||||  ||||||||| ||||||| |||||||| ||  |||| || | | ||| |||||||||||||||    
T  7392282 gtcaagtagtttagtggctataattcatatttttcaaggtgaataagtggggtgttcggggttcaaaccccaacctctgcatataacaatg 7392372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 365
Target Start/End: Complemental strand, 16916576 - 16916486
Alignment:
Q  275 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    ||||||||| |||| || || |||| | |||||| ||| ||||||| || ||||||||||||||||| | ||||| || |||||| |||||    
T  16916576 gtcaagtagcttagtggctaaaatttatcttttttaagctgaataagtgaggtgtccgaagttcgaaccccgacccctacatatagcaatg 16916486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 295 - 341
Target Start/End: Original strand, 21877668 - 21877714
Alignment:
Q  295 gaattcacctttttcaagatgaataaatggggtgtccgaagttcgaa 341  Q
    |||| ||||||||||||||||||||| |||||||| ||| |||||||    
T  21877668 gaatccacctttttcaagatgaataagtggggtgttcgaggttcgaa 21877714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 365
Target Start/End: Original strand, 27726345 - 27726435
Alignment:
Q  275 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    |||||||||| ||| |||||||||||||||||| |||   ||||||   |||||||||| ||||||| | || ||||||| ||||| ||||    
T  27726345 gtcaagtagtctagtggttagaattcaccttttccaaagcgaataagcagggtgtccgaggttcgaaccccggccactgcttataataatg 27726435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 365
Target Start/End: Original strand, 36315950 - 36316040
Alignment:
Q  275 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    ||||||||| ||||  |||||||||||| || |  ||| ||||||| |||||||||||| ||||||| | || || |||||||||| ||||    
T  36315950 gtcaagtagcttagttgttagaattcactttatataaggtgaataagtggggtgtccgaggttcgaaccccggcccctgcatataataatg 36316040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 365
Target Start/End: Complemental strand, 39524806 - 39524717
Alignment:
Q  275 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    ||||||||  |||| || |||||||||||||||||||  | |||||||| ||||| || | |||||| ||| ||| |||||||||||||||    
T  39524806 gtcaagtaacttagtggatagaattcacctttttcaaagtaaataaatgaggtgttcgga-ttcgaacctcaacccctgcatataacaatg 39524717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 365
Target Start/End: Original strand, 3481146 - 3481234
Alignment:
Q  276 tcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    ||||||||||||| |||||||||||||| |||| ||| ||||||| || ||| | || |||||||| | || |  |||||||||||||||    
T  3481146 tcaagtagtttagtggttagaattcaccatttttaaggtgaataagtgaggtat-cggagttcgaaccccggctcctgcatataacaatg 3481234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 331
Target Start/End: Original strand, 17997716 - 17997770
Alignment:
Q  275 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtcc 331  Q
    |||||||||| ||| || |||||||||||||||  ||| ||||||||||||||||||    
T  17997716 gtcaagtagtctagtggctagaattcacctttt--aaggtgaataaatggggtgtcc 17997770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 365
Target Start/End: Original strand, 19837304 - 19837377
Alignment:
Q  292 ttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    |||||||||||| |||| || |||||||| | |||||||||| ||| ||| | ||||  |||||||||||||||    
T  19837304 ttagaattcaccattttgaaaatgaataagttgggtgtccgaggtttgaaccgcgacacctgcatataacaatg 19837377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 332
Target Start/End: Complemental strand, 25200687 - 25200634
Alignment:
Q  279 agtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccg 332  Q
    |||||||||| || |||||||||   ||||||| ||||||||||||||||||||    
T  25200687 agtagtttagtggctagaattcattattttcaatatgaataaatggggtgtccg 25200634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 330
Target Start/End: Original strand, 26734265 - 26734302
Alignment:
Q  293 tagaattcacctttttcaagatgaataaatggggtgtc 330  Q
    |||||||||||||||||||| ||||||| |||||||||    
T  26734265 tagaattcacctttttcaaggtgaataagtggggtgtc 26734302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 316 - 365
Target Start/End: Complemental strand, 31694148 - 31694099
Alignment:
Q  316 aataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    ||||| ||||||||||| ||||||||||||| || |||||||||| ||||    
T  31694148 aataagtggggtgtccggagttcgaatctcgtcccctgcatataataatg 31694099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 365
Target Start/End: Original strand, 37410462 - 37410547
Alignment:
Q  280 gtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    ||||| ||| || |||||||| || |||| |||  |||||| || |||||||| |||||||| || |||| |||||||||||||||    
T  37410462 gtagtctagtggctagaattctccctttttaaggagaataagtgaggtgtccggagttcgaaccttgacccctgcatataacaatg 37410547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 360
Target Start/End: Complemental strand, 41000879 - 41000794
Alignment:
Q  275 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataa 360  Q
    |||||||||| | | ||||||||||||| ||||| ||| ||||||| |||| ||| ||   |||||||||||| | ||||||||||    
T  41000879 gtcaagtagtctggtggttagaattcacattttttaaggtgaataagtgggatgttcgggattcgaatctcgatctctgcatataa 41000794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 365
Target Start/End: Complemental strand, 44843802 - 44843721
Alignment:
Q  281 tagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    |||| ||| |||||||||||||||| |  |||||||||||||||||||||||  ||||||| | ||||| || ||||||| ||||    
T  44843802 tagtctagtggttagaattcaccttat--aagatgaataaatggggtgtccg-ggttcgaaccccgacccctacatataataatg 44843721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 365
Target Start/End: Complemental strand, 24427456 - 24427392
Alignment:
Q  301 acctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    |||| ||||||| |||||||||||||| | ||  ||||||| || |||| |||||||||||||||    
T  24427456 acctatttcaaggtgaataaatggggtattcggggttcgaaccttgacccctgcatataacaatg 24427392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 4e-17; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 296 - 365
Target Start/End: Complemental strand, 38040363 - 38040295
Alignment:
Q  296 aattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    ||||||||||||||||||||||||| |||| |||||| |||||||| ||||||| |||||||||||||||    
T  38040363 aattcacctttttcaagatgaataagtgggatgtccg-agttcgaacctcgacccctgcatataacaatg 38040295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 291 - 368
Target Start/End: Complemental strand, 13754107 - 13754032
Alignment:
Q  291 gttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtat 368  Q
    ||||||||||||||| |  |||||||||||||||||||||||| |||||||  |||||| |||||||||| |||||||    
T  13754107 gttagaattcaccttat--aagatgaataaatggggtgtccgacgttcgaacatcgacccctgcatataataatgtat 13754032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 293 - 365
Target Start/End: Complemental strand, 27006441 - 27006369
Alignment:
Q  293 tagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    |||||||||||||||||||| ||||||| ||| ||||||| |||||||| | ||||| | |||||||||||||    
T  27006441 tagaattcacctttttcaaggtgaataagtggagtgtccggagttcgaaccccgaccccagcatataacaatg 27006369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 290 - 369
Target Start/End: Complemental strand, 6291099 - 6291021
Alignment:
Q  290 ggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatg 369  Q
    ||||||||||||||||||||||  ||||||||||||||||| |  ||||||| ||| |||| | ||||||||||||||||    
T  6291099 ggttagaattcacctttttcaatgtgaataaatggggtgtctggggttcgaacctcaacca-tacatataacaatgtatg 6291021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 275 - 330
Target Start/End: Complemental strand, 29561767 - 29561712
Alignment:
Q  275 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtc 330  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||| |||| ||||    
T  29561767 gtcaactagtttagtggttagaattcacctttttcaagatgaataagtgggatgtc 29561712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 278 - 341
Target Start/End: Complemental strand, 40384367 - 40384304
Alignment:
Q  278 aagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaa 341  Q
    ||||||||||| || |||||||||||||||| ||| ||||||| ||||||||||| ||||||||    
T  40384367 aagtagtttagtggctagaattcaccttttttaaggtgaataagtggggtgtccggagttcgaa 40384304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 293 - 365
Target Start/End: Complemental strand, 31556919 - 31556847
Alignment:
Q  293 tagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    ||||||||||| |||||||| ||||||| |||||||||||  |||||||   ||||| |||||||||||||||    
T  31556919 tagaattcacccttttcaaggtgaataagtggggtgtccggggttcgaactccgacccctgcatataacaatg 31556847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 293 - 369
Target Start/End: Complemental strand, 38361586 - 38361510
Alignment:
Q  293 tagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatg 369  Q
    |||||||||| |||||||||  |||||||||||||||| || ||||||||  || || |||||||| ||||||||||    
T  38361586 tagaattcacatttttcaaggagaataaatggggtgtctgaggttcgaattccggcccctgcatatcacaatgtatg 38361510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 290 - 365
Target Start/End: Complemental strand, 13862228 - 13862154
Alignment:
Q  290 ggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    ||||||||||| |||||||||||| |||||| |||||||||||  |||||||   ||||| |||||||||||||||    
T  13862228 ggttagaattctcctttttcaagaagaataagtggggtgtccg-ggttcgaactccgacccctgcatataacaatg 13862154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 275 - 365
Target Start/End: Original strand, 42260696 - 42260786
Alignment:
Q  275 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    |||| |||||||||  | ||||||||| |||||| ||| ||||||| |||| |||||| |||||||| | ||| | |||||||||||||||    
T  42260696 gtcaggtagtttagtagctagaattcatctttttaaaggtgaataagtgggatgtccggagttcgaaacccgaaccctgcatataacaatg 42260786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 275 - 365
Target Start/End: Original strand, 42553117 - 42553206
Alignment:
Q  275 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    ||||| ||||||||  |||||||||||| ||||||||| ||||||| ||  |||||||  ||||||| | ||||| |||||||||||||||    
T  42553117 gtcaaatagtttagttgttagaattcacatttttcaaggtgaataagtgtagtgtccggggttcgaaccccgacc-ctgcatataacaatg 42553206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 276 - 365
Target Start/End: Original strand, 10192868 - 10192956
Alignment:
Q  276 tcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    |||||||||  ||||| ||||||| |||||||| ||||||||||| |||||||||||  |||  |||||||||| || | ||||||||||    
T  10192868 tcaagtagtccaggggctagaattaaccttttt-aagatgaataagtggggtgtccgtggtttaaatctcgacccctacttataacaatg 10192956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 275 - 320
Target Start/End: Complemental strand, 18536033 - 18535988
Alignment:
Q  275 gtcaagtagtttaggggttagaattcacctttttcaagatgaataa 320  Q
    |||||||||||||| ||||||||||||| ||||||||| |||||||    
T  18536033 gtcaagtagtttagtggttagaattcacttttttcaaggtgaataa 18535988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 280 - 329
Target Start/End: Original strand, 22687862 - 22687911
Alignment:
Q  280 gtagtttaggggttagaattcacctttttcaagatgaataaatggggtgt 329  Q
    ||||| ||| ||||||||||||||||||||||| ||||||| ||||||||    
T  22687862 gtagtctagtggttagaattcacctttttcaaggtgaataagtggggtgt 22687911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 365
Target Start/End: Original strand, 7147013 - 7147085
Alignment:
Q  293 tagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    |||||||||||||||||||  | |||||||| |||||| || ||||||| | ||||| |||||||||| ||||    
T  7147013 tagaattcacctttttcaatgtaaataaatgaggtgtcagaggttcgaaccccgacccctgcatataataatg 7147085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 341
Target Start/End: Original strand, 22396982 - 22397030
Alignment:
Q  293 tagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaa 341  Q
    ||||||||||| |||||||||||||||| |||||||||||  |||||||    
T  22396982 tagaattcacccttttcaagatgaataagtggggtgtccggggttcgaa 22397030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 275 - 330
Target Start/End: Complemental strand, 4429262 - 4429207
Alignment:
Q  275 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtc 330  Q
    ||||| |||||||  |||||||||||| |||||| ||||||||||| |||||||||    
T  4429262 gtcaaatagtttaatggttagaattcatcttttttaagatgaataagtggggtgtc 4429207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 278 - 365
Target Start/End: Original strand, 11246473 - 11246560
Alignment:
Q  278 aagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    ||||||| ||| || |||||||||||||||||||| ||||||| |||| |||| |  ||| ||  | ||||| |||||||||||||||    
T  11246473 aagtagtctagtggctagaattcacctttttcaagctgaataagtgggatgtctggggtttgagccccgacccctgcatataacaatg 11246560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 290 - 365
Target Start/End: Original strand, 38129004 - 38129079
Alignment:
Q  290 ggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    |||||||||||| | |||||||| ||||||| ||| ||||||   ||||||| | ||||| |||||||||||||||    
T  38129004 ggttagaattcatcattttcaaggtgaataagtggagtgtccagggttcgaaccccgacccctgcatataacaatg 38129079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 280 - 365
Target Start/End: Original strand, 9408933 - 9409016
Alignment:
Q  280 gtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    ||||||||| |||||||||||| ||| |  ||| |||||||||| ||||||||  |||||||   ||||| |||||||||||||||    
T  9408933 gtagtttagtggttagaattcatcttat--aagttgaataaatgaggtgtccggggttcgaactccgacccctgcatataacaatg 9409016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 365
Target Start/End: Complemental strand, 28537254 - 28537164
Alignment:
Q  275 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    |||||||||  ||| || ||||||||||| |||||||  ||||||| |||||||||||  ||||||| | || ||  ||||||||||||||    
T  28537254 gtcaagtagcctagtggctagaattcaccattttcaaagtgaataagtggggtgtccggggttcgaaccccggcccatgcatataacaatg 28537164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 303 - 369
Target Start/End: Complemental strand, 31710032 - 31709967
Alignment:
Q  303 ctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatg 369  Q
    |||||||||| ||||||||||| || ||||| ||||||||||| ||| || ||||||||||| ||||    
T  31710032 ctttttcaaggtgaataaatggagt-tccgaggttcgaatctcaacccctacatataacaatatatg 31709967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 329
Target Start/End: Original strand, 14077233 - 14077286
Alignment:
Q  276 tcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgt 329  Q
    ||||||||||||| ||||||||||||||||||  || || ||||| ||||||||    
T  14077233 tcaagtagtttagtggttagaattcaccttttataaaataaataagtggggtgt 14077286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 365
Target Start/End: Original strand, 37986844 - 37986933
Alignment:
Q  276 tcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    ||||||||  ||| || |||||||||||||||||||| ||||||| |||| ||||||  |||| ||   ||||| |||||||||| ||||    
T  37986844 tcaagtagcctagtggctagaattcacctttttcaaggtgaataagtgggatgtccggggttcaaactccgacctctgcatataataatg 37986933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 330
Target Start/End: Complemental strand, 41539415 - 41539378
Alignment:
Q  293 tagaattcacctttttcaagatgaataaatggggtgtc 330  Q
    |||||||||||||||||||||| ||||| |||||||||    
T  41539415 tagaattcacctttttcaagattaataagtggggtgtc 41539378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 290 - 365
Target Start/End: Complemental strand, 9963518 - 9963445
Alignment:
Q  290 ggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    ||||||||||||| || |  ||| ||||||| ||||| |||||||||||||| | | ||| |||||||||||||||    
T  9963518 ggttagaattcactttat--aaggtgaataagtggggggtccgaagttcgaaccccaacccctgcatataacaatg 9963445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 341
Target Start/End: Complemental strand, 10106731 - 10106683
Alignment:
Q  293 tagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaa 341  Q
    |||||||  ||||||||||||||||||| |||||||||||  |||||||    
T  10106731 tagaatttgcctttttcaagatgaataagtggggtgtccggggttcgaa 10106683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 4e-17; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 280 - 365
Target Start/End: Original strand, 1589139 - 1589223
Alignment:
Q  280 gtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    ||||||||| || |||||||||||||||| |||||||||||||||| ||||||  |||||||||  |||| |||||||||||||||    
T  1589139 gtagtttagtggctagaattcaccttttt-aagatgaataaatgggatgtccggggttcgaatcctgacccctgcatataacaatg 1589223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 294 - 365
Target Start/End: Complemental strand, 36045930 - 36045859
Alignment:
Q  294 agaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    |||||||||||||||||| |||| ||| || |||||||| |||||||||||| ||| |||||||||||||||    
T  36045930 agaattcacctttttcaatatgactaagtgaggtgtccggagttcgaatctcaacccctgcatataacaatg 36045859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 275 - 365
Target Start/End: Complemental strand, 49743481 - 49743391
Alignment:
Q  275 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    |||||||||||||| ||||| ||||||||||||||||| | ||||| || ||||||||  ||||||||| || || |||||||||| ||||    
T  49743481 gtcaagtagtttagtggttaaaattcacctttttcaaggtaaataagtgaggtgtccggggttcgaatcccggcccctgcatataataatg 49743391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 293 - 365
Target Start/End: Complemental strand, 33359918 - 33359846
Alignment:
Q  293 tagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    |||||||||||||||||||| ||||||| ||||||||||   ||||||| |||||||  ||||||||||||||    
T  33359918 tagaattcacctttttcaaggtgaataagtggggtgtccagggttcgaacctcgacccttgcatataacaatg 33359846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 310 - 365
Target Start/End: Complemental strand, 9084843 - 9084788
Alignment:
Q  310 aagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    ||||||||||| |||||||||||| ||||||||| ||||| |||||||||||||||    
T  9084843 aagatgaataagtggggtgtccgaggttcgaatcccgacccctgcatataacaatg 9084788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 275 - 365
Target Start/End: Original strand, 11084227 - 11084318
Alignment:
Q  275 gtcaagtagtttaggggttagaattcacctttttcaaga-tgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    |||||||||  ||| |||||||||||||||||||  | | ||||||||||||||||||  |||||||||| ||||| |||||||||| ||||    
T  11084227 gtcaagtagcatagtggttagaattcacctttttttaaagtgaataaatggggtgtcccgagttcgaatcccgacccctgcatataaaaatg 11084318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 275 - 365
Target Start/End: Complemental strand, 20610858 - 20610768
Alignment:
Q  275 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    |||| ||||| ||| || |||||||||||||||| ||| ||||||| |||| |||||| |||||||| | || || |||||||||||||||    
T  20610858 gtcaggtagtctagtggctagaattcaccttttttaaggtgaataagtgggatgtccggagttcgaaccccggcccctgcatataacaatg 20610768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 296 - 365
Target Start/End: Complemental strand, 54414042 - 54413974
Alignment:
Q  296 aattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    ||||||| ||||||||  ||||||||||||||||||||| |||||||| ||||| || ||||||||||||    
T  54414042 aattcacttttttcaaagtgaataaatggggtgtccgaa-ttcgaatcccgaccgctacatataacaatg 54413974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 280 - 360
Target Start/End: Complemental strand, 47416582 - 47416502
Alignment:
Q  280 gtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataa 360  Q
    |||| |||| ||||||||||||||||||||||  ||||||| ||||||||||||  |||||| | | ||| ||||||||||    
T  47416582 gtagcttagtggttagaattcacctttttcaaagtgaataagtggggtgtccgagattcgaaccccaacccctgcatataa 47416502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 275 - 330
Target Start/End: Original strand, 9302634 - 9302689
Alignment:
Q  275 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtc 330  Q
    |||||||||| ||| | ||| ||||||||||||||||| |||||||||||||||||    
T  9302634 gtcaagtagtctagtgattaaaattcacctttttcaaggtgaataaatggggtgtc 9302689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 275 - 365
Target Start/End: Complemental strand, 35122164 - 35122073
Alignment:
Q  275 gtcaagtagtttaggggttagaattcacctttttcaa-gatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    |||||||||||||| |  ||||||| || |||||||| | |||||||||||||||| ||   |||||||||||||| || ||||||||||||    
T  35122164 gtcaagtagtttagtgtatagaatttacttttttcaaaggtgaataaatggggtgttcgggattcgaatctcgacccctacatataacaatg 35122073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 275 - 329
Target Start/End: Original strand, 4419662 - 4419716
Alignment:
Q  275 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgt 329  Q
    |||||||||| ||| ||||||||||||| ||||||||| |||||||||| |||||    
T  4419662 gtcaagtagtgtagcggttagaattcacttttttcaaggtgaataaatgaggtgt 4419716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 275 - 341
Target Start/End: Complemental strand, 6202722 - 6202656
Alignment:
Q  275 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaa 341  Q
    ||||||||| |||| |  |||||||||||||||||||||||||||| | |||||||||  |||||||    
T  6202722 gtcaagtagcttagtgactagaattcacctttttcaagatgaataagtagggtgtccggggttcgaa 6202656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 275 - 365
Target Start/End: Original strand, 35230271 - 35230361
Alignment:
Q  275 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    |||||||||| ||| || || ||||||||| ||||||| | ||||| |||||||||||| ||||||| | |||||  |||||||| |||||    
T  35230271 gtcaagtagtctagtggctaaaattcacctatttcaaggtaaataagtggggtgtccgaggttcgaaccccgacccatgcatatagcaatg 35230361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 314 - 360
Target Start/End: Complemental strand, 43115348 - 43115302
Alignment:
Q  314 tgaataaatggggtgtccgaagttcgaatctcgaccactgcatataa 360  Q
    |||||||||||||||||||  ||||||||||||||| ||||||||||    
T  43115348 tgaataaatggggtgtccggggttcgaatctcgacccctgcatataa 43115302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 275 - 341
Target Start/End: Complemental strand, 55677224 - 55677158
Alignment:
Q  275 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaa 341  Q
    |||||||||||||| ||||||||||||| | ||||||  ||||||| ||| ||||||| ||||||||    
T  55677224 gtcaagtagtttagtggttagaattcacttatttcaaagtgaataagtggagtgtccggagttcgaa 55677158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 277 - 329
Target Start/End: Original strand, 12585537 - 12585589
Alignment:
Q  277 caagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgt 329  Q
    |||||||| ||| || |||||||||||||||||||||||||||| || |||||    
T  12585537 caagtagtctagtggctagaattcacctttttcaagatgaataagtgaggtgt 12585589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 290 - 330
Target Start/End: Original strand, 21023343 - 21023383
Alignment:
Q  290 ggttagaattcacctttttcaagatgaataaatggggtgtc 330  Q
    ||||||||||||||||||||||| ||||||| |||||||||    
T  21023343 ggttagaattcacctttttcaaggtgaataagtggggtgtc 21023383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 341
Target Start/End: Original strand, 49039439 - 49039487
Alignment:
Q  293 tagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaa 341  Q
    |||||||||||||||||||| ||||||| |||||||||||  |||||||    
T  49039439 tagaattcacctttttcaaggtgaataagtggggtgtccggggttcgaa 49039487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 296 - 367
Target Start/End: Complemental strand, 32887229 - 32887158
Alignment:
Q  296 aattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgta 367  Q
    ||||||| ||||||||||| ||||| ||||||||||| |||||||| | ||||  | |||||||| ||||||    
T  32887229 aattcacatttttcaagattaataagtggggtgtccggagttcgaaccacgactccggcatataaaaatgta 32887158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 290 - 365
Target Start/End: Complemental strand, 55967682 - 55967607
Alignment:
Q  290 ggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    |||||||||||||| |||||||   |||||| |||||||||||  |||||||| | | || |||||||||||||||    
T  55967682 ggttagaattcaccattttcaatgcgaataagtggggtgtccggggttcgaattttgtcccctgcatataacaatg 55967607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 341
Target Start/End: Original strand, 47094116 - 47094178
Alignment:
Q  279 agtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaa 341  Q
    |||||||||| ||||||||||| |||||||||| | ||| || ||| ||||||| ||||||||    
T  47094116 agtagtttagtggttagaattctcctttttcaaaaagaagaagtggagtgtccggagttcgaa 47094178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 320
Target Start/End: Complemental strand, 21664197 - 21664152
Alignment:
Q  275 gtcaagtagtttaggggttagaattcacctttttcaagatgaataa 320  Q
    |||||||||  ||| ||||||||||||||||| |||||||||||||    
T  21664197 gtcaagtagcctagtggttagaattcacctttctcaagatgaataa 21664152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 320
Target Start/End: Complemental strand, 21672961 - 21672916
Alignment:
Q  275 gtcaagtagtttaggggttagaattcacctttttcaagatgaataa 320  Q
    |||||||||  ||| ||||||||||||||||| |||||||||||||    
T  21672961 gtcaagtagcctagtggttagaattcacctttctcaagatgaataa 21672916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 365
Target Start/End: Original strand, 37032175 - 37032245
Alignment:
Q  293 tagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    ||||||||||||| |  ||| ||||||| |||||||||||  ||||||||| ||||| |||||||||| ||||    
T  37032175 tagaattcaccttat--aaggtgaataagtggggtgtccggggttcgaatcccgacccctgcatataataatg 37032245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 365
Target Start/End: Complemental strand, 31480385 - 31480300
Alignment:
Q  278 aagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    ||||||| ||| ||||||||||||| ||||  ||| ||||||| |||||||| ||  |||||||| ||  || |||||||||||||||    
T  31480385 aagtagtctagtggttagaattcacgtttt--aaggtgaataagtggggtgttcggggttcgaatttcagcccctgcatataacaatg 31480300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 365
Target Start/End: Complemental strand, 32885802 - 32885717
Alignment:
Q  278 aagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    |||||| |||| || ||||||||||||| |  ||| ||||||| |||||||||||| |||||||   ||||| |||||||||| ||||    
T  32885802 aagtagcttagtggatagaattcaccttat--aaggtgaataagtggggtgtccgaggttcgaactccgacccctgcatataataatg 32885717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 281 - 368
Target Start/End: Complemental strand, 34684679 - 34684594
Alignment:
Q  281 tagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtat 368  Q
    |||| ||| |||||||||||||||| |  ||| ||||||| ||||||||| || ||||||||  | ||| |||||||||| |||||||    
T  34684679 tagtgtagtggttagaattcaccttat--aaggtgaataagtggggtgtctgaggttcgaattccaacctctgcatataataatgtat 34684594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 290 - 365
Target Start/End: Original strand, 41003165 - 41003237
Alignment:
Q  290 ggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    |||||||||||| ||| |  ||| ||||||| ||||||||||| |||||||| ||| ||| |||||||||||||||    
T  41003165 ggttagaattcatcttgt--aaggtgaataagtggggtgtccggagttcgaa-ctcaacccctgcatataacaatg 41003237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 365
Target Start/End: Original strand, 41492493 - 41492564
Alignment:
Q  293 tagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    |||||||||||||||||||| | ||||| |||||||||| | ||||||| | || || |||||||||| ||||    
T  41492493 tagaattcacctttttcaaggtaaataagtggggtgtcc-aggttcgaaccccggcccctgcatataataatg 41492564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 1e-16; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 293 - 365
Target Start/End: Complemental strand, 45314511 - 45314439
Alignment:
Q  293 tagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    |||||||||| ||||||||||||||||| |||| |||| |||||||||| | ||||| |||||||||||||||    
T  45314511 tagaattcacatttttcaagatgaataagtgggatgtctgaagttcgaaccccgacctctgcatataacaatg 45314439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 280 - 369
Target Start/End: Complemental strand, 1244683 - 1244594
Alignment:
Q  280 gtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatg 369  Q
    ||||| ||| || |||||||||||||||||||| ||||||| |||||||||||  ||||||| | | ||| ||||||||| |||||||||    
T  1244683 gtagtctagtggctagaattcacctttttcaaggtgaataagtggggtgtccggggttcgaacccccacccctgcatatagcaatgtatg 1244594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 290 - 365
Target Start/End: Complemental strand, 17240003 - 17239930
Alignment:
Q  290 ggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    |||||||||||||||| |  ||||||||||| |||||||||||| ||||||||| ||||| |||||||||| ||||    
T  17240003 ggttagaattcaccttat--aagatgaataagtggggtgtccgaggttcgaatcccgacccctgcatataataatg 17239930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 275 - 345
Target Start/End: Original strand, 38581582 - 38581652
Alignment:
Q  275 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctc 345  Q
    |||||||||  ||| ||||||||| ||||||||| ||||||||||| |||| ||||||| |||||||||||    
T  38581582 gtcaagtagcctagtggttagaatacaccttttttaagatgaataagtgggatgtccgaggttcgaatctc 38581652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 304 - 365
Target Start/End: Original strand, 44132568 - 44132629
Alignment:
Q  304 tttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    |||||||||||||||||| |||||||| | |||||||| | ||||| |||||||||||||||    
T  44132568 tttttcaagatgaataaacggggtgtctggagttcgaaccccgacctctgcatataacaatg 44132629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 292 - 368
Target Start/End: Complemental strand, 2057581 - 2057507
Alignment:
Q  292 ttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtat 368  Q
    ||||||||||||||||| ||| ||||||| |||||||||||   |||||| ||||||| ||||||||||||||||||    
T  2057581 ttagaattcaccttttttaaggtgaataagtggggtgtccgggattcgaa-ctcgacc-ctgcatataacaatgtat 2057507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 293 - 365
Target Start/End: Complemental strand, 22355184 - 22355112
Alignment:
Q  293 tagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    ||||||||||||||| |||| ||||||| ||||||||| | |||||||| ||| ||| ||||| |||||||||    
T  22355184 tagaattcaccttttgcaaggtgaataagtggggtgtctggagttcgaaactcaacccctgcacataacaatg 22355112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 293 - 365
Target Start/End: Complemental strand, 37123287 - 37123215
Alignment:
Q  293 tagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    ||||||||| |||||| ||  ||||||| | ||||||||| |||||||||||||||| |||||||||| ||||    
T  37123287 tagaattcatcttttttaaagtgaataagtagggtgtccggagttcgaatctcgacccctgcatataataatg 37123215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 275 - 346
Target Start/End: Original strand, 33124341 - 33124412
Alignment:
Q  275 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcg 346  Q
    |||||||||| ||| ||||||||||||||||||| ||| |||||||||| ||||| ||  ||||||| ||||    
T  33124341 gtcaagtagtatagtggttagaattcaccttttttaaggtgaataaatgtggtgttcggggttcgaacctcg 33124412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 275 - 365
Target Start/End: Original strand, 25463242 - 25463332
Alignment:
Q  275 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    |||||||||  ||| ||||||||||||  ||||||||| |||||||| ||||||| || |||||||| ||| | | ||| |||||||||||    
T  25463242 gtcaagtagcctagtggttagaattcatttttttcaaggtgaataaaaggggtgttcggagttcgaacctcaatccctgtatataacaatg 25463332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 276 - 330
Target Start/End: Original strand, 36345158 - 36345212
Alignment:
Q  276 tcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtc 330  Q
    ||||||||||||| || ||||| |||||||||||||||||||||| ||| |||||    
T  36345158 tcaagtagtttagtggctagaactcacctttttcaagatgaataagtggagtgtc 36345212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 276 - 349
Target Start/End: Complemental strand, 42507406 - 42507333
Alignment:
Q  276 tcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgacc 349  Q
    ||||||||||| | |  ||||||||||||||||||| |||||||| |||||||||||  |||| |||| |||||    
T  42507406 tcaagtagtttggtgtctagaattcacctttttcaaaatgaataagtggggtgtccggtgttcaaatcccgacc 42507333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 293 - 365
Target Start/End: Original strand, 44721700 - 44721770
Alignment:
Q  293 tagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    ||||||||||||| |  ||| |||||||||||||||||||| ||||||| | ||||| |||||||||| ||||    
T  44721700 tagaattcaccttat--aaggtgaataaatggggtgtccgaggttcgaaccccgacccctgcatataataatg 44721770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 369
Target Start/End: Complemental strand, 12206599 - 12206523
Alignment:
Q  293 tagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatg 369  Q
    |||||||||||||||||||| |||||||  ||||||| ||  ||||||| | ||||| ||| |||||| ||||||||    
T  12206599 tagaattcacctttttcaaggtgaataagcggggtgttcggggttcgaaccccgacccctgaatataataatgtatg 12206523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 365
Target Start/End: Original strand, 14307688 - 14307760
Alignment:
Q  293 tagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    |||||||||| ||||| ||  ||||||| |||||||| ||  ||||||| ||||||| |||||||||||||||    
T  14307688 tagaattcactttttttaaagtgaataagtggggtgttcggggttcgaacctcgacccctgcatataacaatg 14307760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 331
Target Start/End: Original strand, 29896137 - 29896193
Alignment:
Q  275 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtcc 331  Q
    ||||||||||| |  |||||||||||| |||||||||| ||||||| ||||||||||    
T  29896137 gtcaagtagttcaatggttagaattcatctttttcaaggtgaataagtggggtgtcc 29896193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 310 - 357
Target Start/End: Complemental strand, 1962910 - 1962863
Alignment:
Q  310 aagatgaataaatggggtgtccgaagttcgaatctcgaccactgcata 357  Q
    ||||||||||| ||||||||||| |||||||| ||||||| |||||||    
T  1962910 aagatgaataagtggggtgtccggagttcgaacctcgacccctgcata 1962863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 278 - 329
Target Start/End: Complemental strand, 17896934 - 17896883
Alignment:
Q  278 aagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgt 329  Q
    ||||||||||| ||||||||||||| ||||| ||| ||||||| ||||||||    
T  17896934 aagtagtttagtggttagaattcacattttttaaggtgaataagtggggtgt 17896883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 290 - 364
Target Start/End: Original strand, 2394964 - 2395037
Alignment:
Q  290 ggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaat 364  Q
    ||||||||||||||||||||||| ||||||| ||||   || || ||||||| | ||||| ||||||||||||||    
T  2394964 ggttagaattcacctttttcaaggtgaataagtgggacatctgatgttcgaaccccgacc-ctgcatataacaat 2395037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 310 - 368
Target Start/End: Complemental strand, 3364809 - 3364751
Alignment:
Q  310 aagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtat 368  Q
    ||||||||||| |||||||||  ||||||||| |||| || |||||||||| |||||||    
T  3364809 aagatgaataagtggggtgtctaaagttcgaacctcggcccctgcatataataatgtat 3364751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 325
Target Start/End: Complemental strand, 23664088 - 23664038
Alignment:
Q  275 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggg 325  Q
    |||||||||| ||| | ||||||||||| ||||||||| ||||||||||||    
T  23664088 gtcaagtagtctagtgattagaattcacttttttcaaggtgaataaatggg 23664038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 365
Target Start/End: Original strand, 36386090 - 36386179
Alignment:
Q  275 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    |||||| ||||||  |||||||||||| |||||| ||  ||||||| ||||||||||||  ||| || | ||||| |||||||||||||||    
T  36386090 gtcaagcagtttattggttagaattcatcttttttaaagtgaataagtggggtgtccgagattc-aaacccgacccctgcatataacaatg 36386179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 341
Target Start/End: Original strand, 39334857 - 39334923
Alignment:
Q  275 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaa 341  Q
    |||||||||| ||| || |||||||||||||||||||  ||||||| |||| |||| | ||||||||    
T  39334857 gtcaagtagtctagtggctagaattcacctttttcaaagtgaataagtgggatgtctggagttcgaa 39334923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 341
Target Start/End: Original strand, 44487743 - 44487809
Alignment:
Q  275 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaa 341  Q
    |||| |||| |||| ||||||||||||||||||| ||| ||||||| |||| ||||||  |||||||    
T  44487743 gtcaggtaggttagtggttagaattcaccttttttaaggtgaataagtgggatgtccggggttcgaa 44487809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 365
Target Start/End: Original strand, 4529760 - 4529829
Alignment:
Q  296 aattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    ||||||||||||||||  ||||||| |||||||| || ||||||||   ||||| |||||||||| ||||    
T  4529760 aattcacctttttcaaagtgaataagtggggtgttcggagttcgaactccgacccctgcatataataatg 4529829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 365
Target Start/End: Complemental strand, 9796996 - 9796926
Alignment:
Q  293 tagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    ||||||||||||| |  ||||||||||| |||||||||||  ||||||| | ||||| |||||||||| ||||    
T  9796996 tagaattcaccttat--aagatgaataagtggggtgtccggggttcgaaccccgacccctgcatataataatg 9796926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 324 - 365
Target Start/End: Original strand, 11001758 - 11001799
Alignment:
Q  324 gggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    |||||||||||||||||||| ||||| |||||||||| ||||    
T  11001758 gggtgtccgaagttcgaatcccgacctctgcatataataatg 11001799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 365
Target Start/End: Complemental strand, 11133175 - 11133105
Alignment:
Q  293 tagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    ||||||||||||| |  ||| ||||||| |||||||||||  ||||||| | ||||| |||||||||||||||    
T  11133175 tagaattcaccttat--aaggtgaataagtggggtgtccggggttcgaaccccgacccctgcatataacaatg 11133105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 331
Target Start/End: Complemental strand, 22285206 - 22285165
Alignment:
Q  290 ggttagaattcacctttttcaagatgaataaatggggtgtcc 331  Q
    |||||||||||||||||||||| |||||||| | ||||||||    
T  22285206 ggttagaattcacctttttcaaaatgaataatttgggtgtcc 22285165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 341
Target Start/End: Original strand, 25406643 - 25406692
Alignment:
Q  292 ttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaa 341  Q
    |||||||| ||||||| |||| ||||||| ||||||||||| ||||||||    
T  25406643 ttagaattgaccttttccaaggtgaataagtggggtgtccggagttcgaa 25406692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 304 - 365
Target Start/End: Complemental strand, 34830676 - 34830616
Alignment:
Q  304 tttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    |||||||||  |||||||||||||||||| |||||||| | || || |||||||||||||||    
T  34830676 tttttcaaggagaataaatggggtgtccggagttcgaaccccggcc-ctgcatataacaatg 34830616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 330
Target Start/End: Complemental strand, 407594 - 407542
Alignment:
Q  278 aagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtc 330  Q
    ||||||||||| ||  | ||||||| ||||||||| |||||||||||||||||    
T  407594 aagtagtttagcggcgaaaattcacttttttcaagctgaataaatggggtgtc 407542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 281 - 365
Target Start/End: Complemental strand, 18065367 - 18065283
Alignment:
Q  281 tagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    |||||||  ||||| ||||||| ||||||||| ||||||| |  ||||| ||  ||||||| ||| ||| |||||||||||||||    
T  18065367 tagtttaatggttaaaattcacatttttcaaggtgaataagtaaggtgttcggggttcgaacctcaacccctgcatataacaatg 18065283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 290 - 365
Target Start/End: Complemental strand, 25732039 - 25731963
Alignment:
Q  290 ggttagaattcacctttttc-aagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    |||||||||||||||| |   ||||||||||| |||||||||||| |||||||   ||||| |||||||||| ||||    
T  25732039 ggttagaattcaccttataagaagatgaataagtggggtgtccgaggttcgaactccgacccctgcatataataatg 25731963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 298 - 369
Target Start/End: Complemental strand, 36190151 - 36190079
Alignment:
Q  298 ttcacctttttcaaga-tgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatg 369  Q
    |||| ||||||||| | ||||||| ||||||||| || ||||||| |||||||  | ||||||||||||||||    
T  36190151 ttcatctttttcaaaagtgaataagtggggtgtctgaggttcgaacctcgacccttacatataacaatgtatg 36190079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 359
Target Start/End: Original strand, 41305062 - 41305126
Alignment:
Q  295 gaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatata 359  Q
    |||||||||||||||||| ||||||| |||||| |||| |||| ||| |||  || |||||||||    
T  41305062 gaattcacctttttcaaggtgaataagtggggtatccggagtttgaacctcagcccctgcatata 41305126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 296 - 369
Target Start/End: Original strand, 14949016 - 14949090
Alignment:
Q  296 aattcacctttttcaagatgaataaat-ggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatg 369  Q
    ||||||||||||||||| ||||||||| |||||||||| |||||||| | ||||| |||||||||| ||||||||    
T  14949016 aattcacctttttcaaggtgaataaatgggggtgtccggagttcgaaccccgacctctgcatataataatgtatg 14949090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 275 - 330
Target Start/End: Original strand, 26669635 - 26669690
Alignment:
Q  275 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtc 330  Q
    |||||||||||||| || |||||||||||||||||||| ||||||| |||||||||    
T  26669635 gtcaagtagtttagtggctagaattcacctttttcaaggtgaataagtggggtgtc 26669690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 279 - 341
Target Start/End: Original strand, 3037569 - 3037631
Alignment:
Q  279 agtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaa 341  Q
    ||||| |||| ||||||||||||||||||| ||||||||||| |||| |||| ||||||||||    
T  3037569 agtagcttagtggttagaattcaccttttttaagatgaataagtgggttgtctgaagttcgaa 3037631  T

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Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 275 - 365
Target Start/End: Complemental strand, 4844262 - 4844172
Alignment:
Q  275 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    |||||||||| ||| ||||||||||||| ||||||||| ||||||| || |||||| || |||  || | ||||| |||||||||||||||    
T  4844262 gtcaagtagtctagtggttagaattcacttttttcaaggtgaataagtgaggtgtctgaggtttaaaccccgacccctgcatataacaatg 4844172  T

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Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 276 - 365
Target Start/End: Complemental strand, 32057150 - 32057063
Alignment:
Q  276 tcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    ||||||||||||| |||||||||||||||| |  ||||||||||| |||| | || |  ||||||| |||||||||||||||||| ||||    
T  32057150 tcaagtagtttagtggttagaattcaccttat--aagatgaataagtgggatctctggggttcgaacctcgaccactgcatataataatg 32057063  T

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Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 293 - 365
Target Start/End: Complemental strand, 30833118 - 30833046
Alignment:
Q  293 tagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    |||||||| |||||||||||  |||||| |||||||||||  ||||||| | ||||| |||||||||||||||    
T  30833118 tagaattctcctttttcaaggagaataagtggggtgtccggggttcgaaccccgacccctgcatataacaatg 30833046  T

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Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 293 - 364
Target Start/End: Complemental strand, 7234066 - 7233995
Alignment:
Q  293 tagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaat 364  Q
    |||||||||||||||||||| ||||||| |||||||||||| |||| || | |  || ||||||||||||||    
T  7234066 tagaattcacctttttcaaggtgaataagtggggtgtccgaggttcaaaccccagcccctgcatataacaat 7233995  T

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Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 290 - 369
Target Start/End: Original strand, 29204860 - 29204939
Alignment:
Q  290 ggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatgtatg 369  Q
    ||||||||||||| ||||| ||| ||||||| |||||||| ||||||||||| | ||||| | |||||||| | ||||||    
T  29204860 ggttagaattcactttttttaaggtgaataagtggggtgttcgaagttcgaaccccgacctccgcatataatattgtatg 29204939  T

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Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 292 - 365
Target Start/End: Complemental strand, 1488190 - 1488117
Alignment:
Q  292 ttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    |||||||||||| |||| ||| ||||||||||||||||  |  ||||||| | ||||| |||||||||||||||    
T  1488190 ttagaattcaccatttttaaggtgaataaatggggtgtttggggttcgaaccccgacctctgcatataacaatg 1488117  T

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Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 292 - 337
Target Start/End: Original strand, 16110985 - 16111030
Alignment:
Q  292 ttagaattcacctttttcaagatgaataaatggggtgtccgaagtt 337  Q
    ||||||||||||||||||||||| ||||| || |||||||||||||    
T  16110985 ttagaattcacctttttcaagataaataagtgaggtgtccgaagtt 16111030  T

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Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 365
Target Start/End: Original strand, 19680242 - 19680314
Alignment:
Q  293 tagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    ||||||||||||||||||||  |||||| |||||||||||  ||||||| | || |  |||||||||||||||    
T  19680242 tagaattcacctttttcaaggagaataagtggggtgtccggggttcgaaccccggctcctgcatataacaatg 19680314  T

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Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 293 - 331
Target Start/End: Original strand, 20149973 - 20150011
Alignment:
Q  293 tagaattcacctttttcaagatgaataaatggggtgtcc 331  Q
    |||||||||||||||||||| ||||||| ||||||||||    
T  20149973 tagaattcacctttttcaaggtgaataagtggggtgtcc 20150011  T

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Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 293 - 331
Target Start/End: Complemental strand, 22182859 - 22182821
Alignment:
Q  293 tagaattcacctttttcaagatgaataaatggggtgtcc 331  Q
    |||||||||||||||||||| ||||||| ||||||||||    
T  22182859 tagaattcacctttttcaaggtgaataagtggggtgtcc 22182821  T

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Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 320
Target Start/End: Complemental strand, 3243935 - 3243890
Alignment:
Q  275 gtcaagtagtttaggggttagaattcacctttttcaagatgaataa 320  Q
    |||| ||||||||| ||||||||||||||||||| ||| |||||||    
T  3243935 gtcaggtagtttagtggttagaattcaccttttttaaggtgaataa 3243890  T

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Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 341
Target Start/End: Complemental strand, 15126353 - 15126295
Alignment:
Q  281 tagtttaggggttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaa 341  Q
    |||||||  |||||||||||||||| |  ||| ||||||||||||||||||| ||||||||    
T  15126353 tagtttaatggttagaattcaccttat--aaggtgaataaatggggtgtccggagttcgaa 15126295  T

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Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 341
Target Start/End: Complemental strand, 8176113 - 8176049
Alignment:
Q  278 aagtagtttaggggttagaattcacct-ttttcaagatgaataaatggggtgtccgaagttcgaa 341  Q
    |||||||||||  |||||||||||||| |||| ||| ||||||| |||||||| || ||||||||    
T  8176113 aagtagtttagtagttagaattcacctttttttaaggtgaataagtggggtgttcggagttcgaa 8176049  T

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Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 341
Target Start/End: Complemental strand, 9422950 - 9422886
Alignment:
Q  278 aagtagtttaggggttagaattcacctttt-tcaagatgaataaatggggtgtccgaagttcgaa 341  Q
    |||||| |||| || ||||||||||||||| ||||| ||||||| |||||||||||  |||||||    
T  9422950 aagtagcttagtggctagaattcaccttttatcaaggtgaataagtggggtgtccggtgttcgaa 9422886  T

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Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 290 - 330
Target Start/End: Complemental strand, 12291274 - 12291234
Alignment:
Q  290 ggttagaattcacctttttcaagatgaataaatggggtgtc 330  Q
    ||||||||| || |||||||||| |||||||||||||||||    
T  12291274 ggttagaatacatctttttcaagctgaataaatggggtgtc 12291234  T

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Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 331
Target Start/End: Complemental strand, 17305635 - 17305580
Alignment:
Q  275 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtcc 331  Q
    ||||||||| |||| | |||||||||| |||||||||| ||||||| ||||||||||    
T  17305635 gtcaagtagcttagtgattagaattca-ctttttcaaggtgaataagtggggtgtcc 17305580  T

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Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 341
Target Start/End: Original strand, 29430297 - 29430345
Alignment:
Q  293 tagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaa 341  Q
    ||||||| |||||||| ||| ||||||| |||||||||||| |||||||    
T  29430297 tagaatttacctttttaaaggtgaataagtggggtgtccgaggttcgaa 29430345  T

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Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 365
Target Start/End: Complemental strand, 34524976 - 34524904
Alignment:
Q  293 tagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    ||||||||||||||||| || ||||||| |||||||| ||  | ||||| | || || |||||||||||||||    
T  34524976 tagaattcacctttttccaggtgaataagtggggtgttcggggctcgaaccccggcccctgcatataacaatg 34524904  T

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Target: scaffold0119 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 275 - 330
Target Start/End: Complemental strand, 1158 - 1103
Alignment:
Q  275 gtcaagtagtttaggggttagaattcacctttttcaagatgaataaatggggtgtc 330  Q
    |||||||||||||| || |||||||||||||||||||| ||||||| |||||||||    
T  1158 gtcaagtagtttagtggctagaattcacctttttcaaggtgaataagtggggtgtc 1103  T

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Target: scaffold0129 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 293 - 365
Target Start/End: Complemental strand, 7157 - 7085
Alignment:
Q  293 tagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaatg 365  Q
    |||||||||||||||||||||||||||| ||| ||||  || ||||||| |  |||| |||||||||||||||    
T  7157 tagaattcacctttttcaagatgaataagtggagtgtatgaggttcgaaacctgacccctgcatataacaatg 7085  T

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Target: scaffold0011 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 292 - 338
Target Start/End: Original strand, 19388 - 19434
Alignment:
Q  292 ttagaattcacctttttcaagatgaataaatggggtgtccgaagttc 338  Q
    ||||||||||||||||||||  |||||||||| ||||||||| ||||    
T  19388 ttagaattcacctttttcaaagtgaataaatgaggtgtccgaggttc 19434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1603 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1603
Description:

Target: scaffold1603; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 291 - 364
Target Start/End: Complemental strand, 703 - 630
Alignment:
Q  291 gttagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaatctcgaccactgcatataacaat 364  Q
    |||||||||||||||||| ||| |||| |||| || ||||||   |||||| ||||||| | ||||||||||||    
T  703 gttagaattcaccttttttaaggtgaacaaattggatgtccgtgattcgaacctcgaccccggcatataacaat 630  T

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Target: scaffold0009 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 341
Target Start/End: Complemental strand, 62814 - 62766
Alignment:
Q  293 tagaattcacctttttcaagatgaataaatggggtgtccgaagttcgaa 341  Q
    |||||||||| ||||| ||||||||||| |||| ||||||| |||||||    
T  62814 tagaattcactttttttaagatgaataagtgggttgtccgatgttcgaa 62766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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