View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4955_high_9 (Length: 240)
Name: NF4955_high_9
Description: NF4955
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4955_high_9 |
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Alignment Details
Target: chr3 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 24269265 - 24269044
Alignment:
| Q |
1 |
cacacaatatgtaccaggtgagccaacatttgtaactgtacgagtaacttcttgtacgaagtgtttccctagattaggcactgtgattgacggatagtta |
100 |
Q |
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||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
24269265 |
cacacgatatgtaccaggtgagccaacatttgtaactgtacgagtaacttcttgtacgaagtgtttccctagattaggcactgtgattgaaggatagtta |
24269166 |
T |
|
| Q |
101 |
aaatctaacatgttgtaagactttggacaaatgtagggctttctagaaaacattttcatttgtgtttggttgtaaccatgtgcacaaaggaagttcaagt |
200 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24269165 |
aaatctaacatgttgtaagactttggacaaatgtagggctttctagaaaacattttcatttgtgtttggttgtaaccatgtgcacaaaggaagttcaagt |
24269066 |
T |
|
| Q |
201 |
aatctacaatgtttagatcata |
222 |
Q |
| |
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|||||||||||||||||||||| |
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|
| T |
24269065 |
aatctacaatgtttagatcata |
24269044 |
T |
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