View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4955_low_11 (Length: 201)

Name: NF4955_low_11
Description: NF4955
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4955_low_11
NF4955_low_11
[»] chr7 (61 HSPs)
chr7 (1-193)||(44167902-44168094)
chr7 (1-193)||(33624768-33624974)
chr7 (1-163)||(46330779-46330943)
chr7 (1-161)||(45958811-45958973)
chr7 (1-163)||(47791818-47791982)
chr7 (1-163)||(46044442-46044607)
chr7 (1-161)||(29156119-29156280)
chr7 (5-188)||(15130695-15130892)
chr7 (24-163)||(43597635-43597776)
chr7 (24-161)||(15652945-15653084)
chr7 (1-163)||(4926352-4926519)
chr7 (1-163)||(7238727-7238891)
chr7 (4-163)||(6588670-6588831)
chr7 (4-163)||(18058989-18059150)
chr7 (1-160)||(21109501-21109662)
chr7 (8-163)||(38199049-38199193)
chr7 (1-160)||(43574219-43574380)
chr7 (8-160)||(4900018-4900171)
chr7 (8-115)||(43084041-43084150)
chr7 (1-151)||(4883776-4883928)
chr7 (1-163)||(22378609-22378773)
chr7 (25-163)||(14990697-14990837)
chr7 (25-163)||(15420308-15420448)
chr7 (8-163)||(3495643-3495787)
chr7 (1-151)||(38158928-38159085)
chr7 (1-163)||(44080938-44081102)
chr7 (1-163)||(35482207-35482371)
chr7 (6-163)||(1961882-1962041)
chr7 (1-193)||(16080889-16081082)
chr7 (1-163)||(11397110-11397273)
chr7 (24-151)||(9633333-9633460)
chr7 (1-151)||(38598947-38599099)
chr7 (1-74)||(38199810-38199883)
chr7 (24-151)||(1260143-1260271)
chr7 (24-159)||(1544630-1544766)
chr7 (79-151)||(27727392-27727464)
chr7 (28-128)||(37108587-37108686)
chr7 (1-104)||(36020005-36020108)
chr7 (28-162)||(1066555-1066691)
chr7 (1-74)||(3496425-3496498)
chr7 (28-136)||(8081814-8081923)
chr7 (1-56)||(15131589-15131644)
chr7 (1-56)||(45958085-45958140)
chr7 (70-163)||(10620671-10620765)
chr7 (24-74)||(27728000-27728050)
chr7 (1-74)||(43083307-43083381)
chr7 (84-136)||(37539849-37539901)
chr7 (4-56)||(44167124-44167176)
chr7 (1-56)||(46043643-46043698)
chr7 (1-56)||(46331627-46331682)
chr7 (2-56)||(33625667-33625721)
chr7 (30-151)||(42974272-42974394)
chr7 (24-74)||(37537488-37537537)
chr7 (24-151)||(41571469-41571596)
chr7 (155-188)||(46330948-46330981)
chr7 (1-45)||(6330934-6330978)
chr7 (28-151)||(8832715-8832840)
chr7 (28-151)||(28924503-28924624)
chr7 (89-163)||(36019913-36019988)
chr7 (28-104)||(38593281-38593358)
chr7 (110-151)||(6330986-6331027)
[»] chr5 (64 HSPs)
chr5 (1-193)||(8218119-8218313)
chr5 (1-193)||(43440981-43441175)
chr5 (1-163)||(41139005-41139169)
chr5 (5-163)||(13920047-13920207)
chr5 (6-163)||(24637090-24637249)
chr5 (1-162)||(16965878-16966041)
chr5 (10-193)||(26865814-26865986)
chr5 (2-163)||(42877762-42877924)
chr5 (1-163)||(10463717-10463881)
chr5 (1-163)||(8336823-8336987)
chr5 (6-193)||(4462070-4462260)
chr5 (5-151)||(2003936-2004084)
chr5 (1-163)||(37103012-37103176)
chr5 (1-163)||(8404546-8404710)
chr5 (3-161)||(22023220-22023380)
chr5 (1-163)||(27335610-27335774)
chr5 (4-162)||(8313192-8313352)
chr5 (1-163)||(27307799-27307963)
chr5 (24-163)||(34785401-34785541)
chr5 (24-163)||(1683316-1683457)
chr5 (8-163)||(34527017-34527161)
chr5 (25-163)||(621777-621917)
chr5 (1-102)||(9687715-9687818)
chr5 (28-163)||(31211194-31211332)
chr5 (4-163)||(40158248-40158409)
chr5 (1-163)||(4462736-4462900)
chr5 (4-84)||(8217493-8217575)
chr5 (1-151)||(30394060-30394212)
chr5 (1-151)||(18261338-18261491)
chr5 (1-163)||(41193127-41193291)
chr5 (1-151)||(2005003-2005155)
chr5 (1-163)||(17742313-17742469)
chr5 (30-151)||(22167039-22167161)
chr5 (1-74)||(38693678-38693751)
chr5 (107-163)||(38693617-38693673)
chr5 (1-88)||(26865212-26865301)
chr5 (7-115)||(6365413-6365522)
chr5 (40-136)||(36875874-36875973)
chr5 (28-151)||(2262957-2263081)
chr5 (48-151)||(14049897-14050001)
chr5 (28-162)||(40272464-40272600)
chr5 (28-151)||(43210790-43210914)
chr5 (28-141)||(3548519-3548633)
chr5 (1-150)||(4426002-4426153)
chr5 (42-151)||(9924280-9924391)
chr5 (28-151)||(19332468-19332592)
chr5 (49-136)||(37446433-37446522)
chr5 (9-60)||(28381174-28381225)
chr5 (89-163)||(34009992-34010066)
chr5 (155-193)||(41139174-41139212)
chr5 (1-62)||(28456565-28456626)
chr5 (4-52)||(38691964-38692012)
chr5 (1-53)||(43440228-43440280)
chr5 (27-151)||(30698845-30698970)
chr5 (1-56)||(41139903-41139958)
chr5 (1-56)||(43538568-43538623)
chr5 (82-136)||(28616206-28616260)
chr5 (28-151)||(43209900-43210024)
chr5 (28-163)||(10674648-10674785)
chr5 (52-115)||(42852767-42852832)
chr5 (28-106)||(37812678-37812757)
chr5 (28-92)||(27280189-27280252)
chr5 (24-64)||(37446332-37446372)
chr5 (122-162)||(42852826-42852866)
[»] chr8 (72 HSPs)
chr8 (1-193)||(36063542-36063738)
chr8 (1-163)||(24451462-24451626)
chr8 (5-163)||(21135305-21135465)
chr8 (1-163)||(13323700-13323865)
chr8 (1-163)||(35863019-35863183)
chr8 (1-163)||(35369168-35369332)
chr8 (1-163)||(37706872-37707036)
chr8 (1-163)||(41281451-41281613)
chr8 (2-163)||(18840067-18840230)
chr8 (1-163)||(17842443-17842606)
chr8 (2-163)||(8784557-8784720)
chr8 (1-135)||(6413447-6413583)
chr8 (1-163)||(9252625-9252789)
chr8 (1-151)||(44265426-44265578)
chr8 (1-162)||(6590244-6590406)
chr8 (1-162)||(25102112-25102275)
chr8 (4-163)||(37967516-37967677)
chr8 (1-163)||(33322511-33322675)
chr8 (4-163)||(5250540-5250701)
chr8 (8-163)||(39336978-39337122)
chr8 (1-163)||(16472970-16473124)
chr8 (1-163)||(16477541-16477695)
chr8 (8-145)||(43622961-43623100)
chr8 (1-163)||(6018017-6018181)
chr8 (1-151)||(27875608-27875760)
chr8 (1-151)||(28015789-28015941)
chr8 (1-163)||(38706592-38706756)
chr8 (4-136)||(41590514-41590648)
chr8 (1-163)||(5696062-5696225)
chr8 (1-163)||(17498643-17498807)
chr8 (1-163)||(30658588-30658751)
chr8 (1-107)||(14121950-14122058)
chr8 (39-151)||(17062526-17062639)
chr8 (39-151)||(17585719-17585832)
chr8 (1-163)||(43988304-43988466)
chr8 (24-163)||(36470974-36471115)
chr8 (27-136)||(36018115-36018227)
chr8 (5-136)||(21159957-21160090)
chr8 (27-136)||(28755352-28755463)
chr8 (1-74)||(39337760-39337833)
chr8 (71-163)||(2826931-2827023)
chr8 (6-74)||(35369931-35369999)
chr8 (31-136)||(30968670-30968778)
chr8 (27-151)||(5765878-5766006)
chr8 (24-145)||(42499547-42499670)
chr8 (28-162)||(32244549-32244685)
chr8 (84-151)||(18304829-18304896)
chr8 (28-151)||(44894574-44894698)
chr8 (42-163)||(32514194-32514318)
chr8 (41-190)||(28694963-28695119)
chr8 (27-136)||(2821168-2821271)
chr8 (1-131)||(32243657-32243788)
chr8 (1-53)||(21136206-21136258)
chr8 (1-56)||(13323163-13323218)
chr8 (1-56)||(37706115-37706170)
chr8 (28-136)||(6243479-6243587)
chr8 (1-56)||(16478433-16478488)
chr8 (1-56)||(24452361-24452416)
chr8 (1-56)||(35863922-35863977)
chr8 (1-56)||(36062784-36062839)
chr8 (1-162)||(3866543-3866707)
chr8 (155-193)||(16473129-16473167)
chr8 (155-193)||(16477700-16477738)
chr8 (155-193)||(21135470-21135508)
chr8 (155-193)||(24451631-24451669)
chr8 (155-193)||(35369337-35369375)
chr8 (31-117)||(10409789-10409876)
chr8 (71-136)||(36909741-36909806)
chr8 (41-101)||(28701866-28701928)
chr8 (28-151)||(3865698-3865822)
chr8 (5-74)||(41255319-41255388)
chr8 (7-56)||(41280472-41280521)
[»] chr4 (64 HSPs)
chr4 (1-193)||(44209603-44209797)
chr4 (1-163)||(10321675-10321839)
chr4 (1-163)||(33689444-33689608)
chr4 (1-163)||(25422047-25422210)
chr4 (1-162)||(35060978-35061140)
chr4 (1-163)||(31316520-31316684)
chr4 (4-163)||(37329471-37329633)
chr4 (1-163)||(38114363-38114527)
chr4 (4-163)||(23473628-23473790)
chr4 (28-163)||(51876014-51876151)
chr4 (1-163)||(30331429-30331593)
chr4 (1-163)||(53323754-53323919)
chr4 (1-162)||(19522692-19522855)
chr4 (24-160)||(10085488-10085626)
chr4 (5-163)||(13718126-13718287)
chr4 (8-115)||(53571728-53571837)
chr4 (1-163)||(20178026-20178190)
chr4 (1-163)||(33177572-33177736)
chr4 (1-163)||(47309414-47309578)
chr4 (24-160)||(43938004-43938143)
chr4 (1-163)||(53423716-53423879)
chr4 (1-136)||(4850074-4850211)
chr4 (6-163)||(47379327-47379486)
chr4 (8-133)||(22068084-22068211)
chr4 (28-163)||(55938075-55938212)
chr4 (24-136)||(28448563-28448676)
chr4 (8-163)||(11670106-11670250)
chr4 (1-88)||(11670860-11670949)
chr4 (1-107)||(3873380-3873488)
chr4 (1-151)||(44289657-44289809)
chr4 (1-131)||(51395795-51395927)
chr4 (27-151)||(48082449-48082575)
chr4 (24-136)||(48220065-48220178)
chr4 (26-136)||(47939756-47939867)
chr4 (71-163)||(1870158-1870250)
chr4 (4-117)||(35821107-35821221)
chr4 (71-163)||(38499339-38499431)
chr4 (24-151)||(13603786-13603913)
chr4 (1-74)||(53569135-53569209)
chr4 (1-95)||(7617535-7617631)
chr4 (1-56)||(25243862-25243917)
chr4 (8-74)||(31470949-31471015)
chr4 (8-88)||(53570995-53571078)
chr4 (92-163)||(47463437-47463508)
chr4 (28-151)||(34513181-34513305)
chr4 (71-163)||(42972885-42972976)
chr4 (28-136)||(6817979-6818087)
chr4 (1-56)||(31317816-31317871)
chr4 (27-151)||(55283114-55283239)
chr4 (24-94)||(50824407-50824479)
chr4 (1-56)||(25422944-25422999)
chr4 (28-122)||(28163916-28164010)
chr4 (1-56)||(35055104-35055159)
chr4 (77-163)||(7490751-7490836)
chr4 (155-193)||(10321844-10321882)
chr4 (155-193)||(37329638-37329676)
chr4 (1-54)||(10322579-10322632)
chr4 (28-136)||(35351844-35351954)
chr4 (1-56)||(44208855-44208910)
chr4 (24-120)||(52947956-52948053)
chr4 (158-188)||(25422218-25422248)
chr4 (157-187)||(31316691-31316721)
chr4 (1-74)||(19522962-19523034)
chr4 (81-122)||(44452998-44453039)
[»] chr3 (65 HSPs)
chr3 (1-188)||(32942980-32943168)
chr3 (1-163)||(32146976-32147140)
chr3 (1-163)||(53397075-53397239)
chr3 (1-163)||(19669679-19669844)
chr3 (1-163)||(37178921-37179085)
chr3 (1-163)||(45235496-45235661)
chr3 (57-163)||(45387448-45387556)
chr3 (1-162)||(45419937-45420098)
chr3 (1-115)||(53439304-53439420)
chr3 (1-136)||(15772043-15772179)
chr3 (4-147)||(53517951-53518096)
chr3 (1-163)||(21749546-21749710)
chr3 (1-163)||(28685286-28685445)
chr3 (1-163)||(38173882-38174046)
chr3 (1-151)||(40762763-40762915)
chr3 (8-115)||(50615270-50615379)
chr3 (8-115)||(117633-117742)
chr3 (28-163)||(23883541-23883678)
chr3 (24-162)||(23917331-23917471)
chr3 (1-151)||(25249996-25250148)
chr3 (24-163)||(29348278-29348417)
chr3 (1-116)||(37481253-37481371)
chr3 (2-85)||(41786321-41786404)
chr3 (1-163)||(19601529-19601693)
chr3 (9-160)||(27492301-27492454)
chr3 (4-128)||(53377305-53377433)
chr3 (9-163)||(44808991-44809147)
chr3 (27-151)||(39562713-39562839)
chr3 (24-145)||(54269015-54269137)
chr3 (1-88)||(44555344-44555433)
chr3 (1-88)||(50614526-50614615)
chr3 (24-163)||(11045405-11045548)
chr3 (27-151)||(46295057-46295183)
chr3 (1-88)||(116904-116993)
chr3 (8-115)||(44557765-44557877)
chr3 (28-162)||(33475476-33475612)
chr3 (28-151)||(52701168-52701292)
chr3 (71-163)||(26268719-26268812)
chr3 (28-136)||(44555924-44556033)
chr3 (24-116)||(3173707-3173801)
chr3 (1-56)||(32147860-32147915)
chr3 (1-151)||(33476353-33476504)
chr3 (1-56)||(32943871-32943926)
chr3 (1-56)||(37179828-37179883)
chr3 (44-115)||(45406698-45406771)
chr3 (41-101)||(46529628-46529692)
chr3 (122-163)||(117598-117639)
chr3 (51-122)||(44287955-44288028)
chr3 (122-163)||(50615235-50615276)
chr3 (1-42)||(54185590-54185631)
chr3 (123-163)||(44557730-44557770)
chr3 (1-56)||(1430163-1430218)
chr3 (1-56)||(27868055-27868109)
chr3 (1-56)||(45234697-45234752)
chr3 (81-151)||(25232717-25232787)
chr3 (155-193)||(32147145-32147183)
chr3 (155-193)||(53439460-53439498)
chr3 (155-188)||(37179090-37179123)
chr3 (122-163)||(53439414-53439455)
chr3 (28-136)||(41928016-41928126)
chr3 (155-187)||(53397244-53397276)
chr3 (28-151)||(8576066-8576191)
chr3 (24-74)||(11293803-11293853)
chr3 (155-193)||(19669849-19669887)
chr3 (28-74)||(52701902-52701947)
[»] chr1 (59 HSPs)
chr1 (1-163)||(36368041-36368205)
chr1 (4-163)||(30982533-30982694)
chr1 (1-163)||(33709096-33709260)
chr1 (4-163)||(46596927-46597087)
chr1 (6-163)||(52493513-52493672)
chr1 (1-163)||(11999697-11999862)
chr1 (1-163)||(30719459-30719624)
chr1 (1-162)||(13501186-13501349)
chr1 (1-163)||(35530766-35530930)
chr1 (4-136)||(19791222-19791356)
chr1 (8-115)||(37986893-37987002)
chr1 (1-163)||(15053620-15053771)
chr1 (1-159)||(21091031-21091190)
chr1 (8-115)||(12368429-12368538)
chr1 (1-136)||(51561525-51561662)
chr1 (2-163)||(26020550-26020713)
chr1 (1-163)||(26805643-26805806)
chr1 (9-163)||(28700942-28701099)
chr1 (8-159)||(36248320-36248460)
chr1 (1-151)||(31400199-31400351)
chr1 (28-136)||(33707549-33707658)
chr1 (1-193)||(43504755-43504954)
chr1 (1-74)||(36249101-36249174)
chr1 (42-163)||(47008797-47008920)
chr1 (24-163)||(10041391-10041532)
chr1 (1-88)||(15054418-15054507)
chr1 (24-119)||(21794413-21794510)
chr1 (1-74)||(29231886-29231959)
chr1 (27-151)||(31024220-31024345)
chr1 (3-190)||(42971933-42972121)
chr1 (1-88)||(12367683-12367772)
chr1 (1-88)||(37986189-37986278)
chr1 (27-151)||(7565343-7565468)
chr1 (28-162)||(12251520-12251656)
chr1 (28-162)||(27550800-27550936)
chr1 (28-162)||(49768560-49768696)
chr1 (1-56)||(36362457-36362512)
chr1 (24-74)||(2059079-2059129)
chr1 (110-163)||(39681884-39681937)
chr1 (28-136)||(11397039-11397148)
chr1 (1-56)||(33708299-33708354)
chr1 (6-56)||(30981733-30981783)
chr1 (28-122)||(48218043-48218138)
chr1 (24-105)||(13083447-13083529)
chr1 (41-134)||(26207482-26207576)
chr1 (1-136)||(6216557-6216695)
chr1 (28-151)||(25351963-25352085)
chr1 (1-56)||(46596133-46596188)
chr1 (28-151)||(49767693-49767817)
chr1 (1-74)||(13501454-13501526)
chr1 (155-188)||(46596889-46596922)
chr1 (92-151)||(23176061-23176120)
chr1 (33-72)||(29231322-29231361)
chr1 (28-74)||(35188186-35188233)
chr1 (28-101)||(48410127-48410202)
chr1 (1-74)||(51561320-51561392)
chr1 (1-74)||(51841246-51841318)
chr1 (157-193)||(11999869-11999905)
chr1 (155-187)||(36248473-36248505)
[»] chr2 (58 HSPs)
chr2 (1-163)||(43932885-43933049)
chr2 (1-163)||(42487820-42487983)
chr2 (1-163)||(44492863-44493027)
chr2 (1-133)||(20719212-20719346)
chr2 (6-163)||(20719934-20720092)
chr2 (1-163)||(31771296-31771460)
chr2 (4-163)||(33832274-33832435)
chr2 (4-163)||(10357298-10357459)
chr2 (8-163)||(42274452-42274609)
chr2 (1-193)||(33000971-33001175)
chr2 (1-163)||(41120718-41120882)
chr2 (1-150)||(30784165-30784316)
chr2 (4-163)||(35498571-35498732)
chr2 (1-161)||(25666018-25666180)
chr2 (8-115)||(20721415-20721524)
chr2 (1-163)||(3043512-3043676)
chr2 (1-161)||(25100565-25100726)
chr2 (1-163)||(8737962-8738127)
chr2 (24-163)||(36512126-36512268)
chr2 (1-93)||(20701236-20701330)
chr2 (24-163)||(7439223-7439364)
chr2 (8-106)||(21440027-21440127)
chr2 (1-163)||(6457249-6457410)
chr2 (1-74)||(18672239-18672312)
chr2 (4-84)||(23787773-23787855)
chr2 (24-145)||(14201135-14201259)
chr2 (23-163)||(31436040-31436182)
chr2 (1-163)||(37593027-37593190)
chr2 (6-160)||(34073727-34073880)
chr2 (32-151)||(44879875-44879995)
chr2 (1-99)||(33031065-33031165)
chr2 (82-163)||(40365035-40365116)
chr2 (5-163)||(44286831-44286994)
chr2 (6-107)||(4327815-4327915)
chr2 (24-74)||(21439299-21439349)
chr2 (73-163)||(29809481-29809571)
chr2 (27-109)||(8392532-8392616)
chr2 (42-136)||(19058821-19058917)
chr2 (1-56)||(20720810-20720865)
chr2 (1-131)||(9111859-9111990)
chr2 (28-109)||(13027653-13027735)
chr2 (4-56)||(18673072-18673124)
chr2 (28-151)||(32318223-32318348)
chr2 (28-136)||(9111576-9111685)
chr2 (5-56)||(44493760-44493811)
chr2 (155-193)||(20720097-20720135)
chr2 (43-139)||(23496580-23496679)
chr2 (1-53)||(13372184-13372236)
chr2 (1-64)||(7654964-7655027)
chr2 (124-163)||(20721380-20721419)
chr2 (1-56)||(42487033-42487088)
chr2 (1-56)||(43932123-43932178)
chr2 (125-163)||(21439983-21440021)
chr2 (28-136)||(3117981-3118090)
chr2 (24-92)||(24951216-24951285)
chr2 (162-193)||(31771472-31771503)
chr2 (28-128)||(32319131-32319232)
chr2 (157-193)||(18672342-18672378)
[»] chr6 (44 HSPs)
chr6 (1-163)||(5079658-5079822)
chr6 (1-163)||(938824-938988)
chr6 (3-193)||(14256258-14256458)
chr6 (1-163)||(15721216-15721380)
chr6 (3-163)||(29692062-29692224)
chr6 (7-163)||(33518507-33518665)
chr6 (8-115)||(18503178-18503287)
chr6 (1-163)||(5974460-5974624)
chr6 (1-163)||(10915281-10915447)
chr6 (9-163)||(30660766-30660922)
chr6 (6-160)||(861513-861670)
chr6 (4-163)||(8709819-8709979)
chr6 (6-160)||(844091-844247)
chr6 (1-163)||(2087418-2087581)
chr6 (1-163)||(22732150-22732313)
chr6 (1-163)||(26356508-26356675)
chr6 (24-163)||(5087341-5087482)
chr6 (8-115)||(17244527-17244636)
chr6 (3-153)||(20898141-20898293)
chr6 (2-163)||(17697537-17697700)
chr6 (4-151)||(1820966-1821113)
chr6 (27-163)||(33744813-33744952)
chr6 (1-163)||(20510471-20510623)
chr6 (1-74)||(17246323-17246396)
chr6 (4-163)||(28476342-28476503)
chr6 (24-151)||(30492725-30492841)
chr6 (4-74)||(5078981-5079051)
chr6 (1-67)||(11400318-11400384)
chr6 (4-71)||(3335412-3335479)
chr6 (28-151)||(289005-289129)
chr6 (71-163)||(12481806-12481898)
chr6 (28-150)||(3914587-3914709)
chr6 (1-56)||(22972048-22972103)
chr6 (1-56)||(23816295-23816350)
chr6 (28-151)||(289523-289647)
chr6 (28-151)||(21108231-21108355)
chr6 (122-163)||(18503143-18503184)
chr6 (77-132)||(17467666-17467721)
chr6 (1-151)||(3375270-3375421)
chr6 (25-62)||(25839635-25839672)
chr6 (1-39)||(22971876-22971914)
chr6 (1-39)||(23816484-23816522)
chr6 (155-188)||(2087586-2087619)
chr6 (70-151)||(30916868-30916949)
[»] scaffold0148 (3 HSPs)
scaffold0148 (1-163)||(35255-35417)
scaffold0148 (4-84)||(38609-38691)
scaffold0148 (155-193)||(35422-35460)
[»] scaffold0651 (2 HSPs)
scaffold0651 (1-163)||(7014-7178)
scaffold0651 (1-56)||(5799-5854)
[»] scaffold0036 (1 HSPs)
scaffold0036 (1-163)||(17527-17691)
[»] scaffold0097 (6 HSPs)
scaffold0097 (1-133)||(23050-23184)
scaffold0097 (6-163)||(23772-23930)
scaffold0097 (8-115)||(25243-25352)
scaffold0097 (1-56)||(24648-24703)
scaffold0097 (155-193)||(23935-23973)
scaffold0097 (124-163)||(25208-25247)
[»] scaffold1190 (1 HSPs)
scaffold1190 (1-187)||(317-506)
[»] scaffold0445 (1 HSPs)
scaffold0445 (1-163)||(6068-6232)
[»] scaffold0707 (1 HSPs)
scaffold0707 (7-163)||(7051-7209)
[»] scaffold0514 (1 HSPs)
scaffold0514 (1-136)||(6353-6490)
[»] scaffold0385 (3 HSPs)
scaffold0385 (8-115)||(10149-10258)
scaffold0385 (1-74)||(9404-9476)
scaffold0385 (155-193)||(10071-10109)
[»] scaffold0093 (1 HSPs)
scaffold0093 (10-105)||(48967-49064)
[»] scaffold1160 (1 HSPs)
scaffold1160 (1-163)||(1137-1301)
[»] scaffold0003 (2 HSPs)
scaffold0003 (8-115)||(240198-240307)
scaffold0003 (1-88)||(239472-239561)
[»] scaffold1191 (1 HSPs)
scaffold1191 (1-163)||(649-812)
[»] scaffold0562 (1 HSPs)
scaffold0562 (1-107)||(4199-4307)
[»] scaffold0627 (1 HSPs)
scaffold0627 (24-136)||(6934-7048)
[»] scaffold0199 (1 HSPs)
scaffold0199 (1-121)||(6184-6306)
[»] scaffold0734 (1 HSPs)
scaffold0734 (28-136)||(3325-3436)
[»] scaffold0571 (1 HSPs)
scaffold0571 (24-163)||(8433-8573)
[»] scaffold0005 (2 HSPs)
scaffold0005 (28-162)||(282940-283076)
scaffold0005 (28-130)||(283422-283525)
[»] scaffold0640 (1 HSPs)
scaffold0640 (27-118)||(4089-4182)
[»] scaffold0051 (1 HSPs)
scaffold0051 (24-142)||(52348-52467)


Alignment Details
Target: chr7 (Bit Score: 177; Significance: 1e-95; HSPs: 61)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 177; E-Value: 1e-95
Query Start/End: Original strand, 1 - 193
Target Start/End: Complemental strand, 44168094 - 44167902
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgtagacgtgttaagaacattactaaa 100  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44168094 cactcagtattagtctttgctcaattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgtagacgtgttaagaacattactaaa 44167995  T
Q  101 agttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatcgttttcaaaaattcatatttaattcatttc 193  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  44167994 agttcctccgcaaaaaattatcgtaaaatttgatttatatgtccagattttattacttttatcgttttaaaaaattcatatttaattcatttc 44167902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 193
Target Start/End: Original strand, 33624768 - 33624974
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttt-gtagacgtgttaagaacattactaa 99  Q
    |||||| |||||||||||| || ||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  33624768 cactcaatattagtctctgttcaatttaaatttgtttaatttatgcttaaactcttaagttttttaacaatttttgtagacgtgttaagaacattactaa 33624867  T
Q  100 aagttcct-------------ccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatcgttttcaaaaattcatatttaat 186  Q
    || ||| |             |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  33624868 aaattcatatgtccaaattatccgcaaaaaattatcgcaaaatttgatttatatgtccaaattttattacttttatcgttttcaaaaattcatatttaat 33624967  T
Q  187 tcatttc 193  Q
    || ||||    
T  33624968 tcgtttc 33624974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 122; E-Value: 8e-63
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 46330779 - 46330943
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttt--gtagacgtgttaagaacattacta 98  Q
    |||||| ||||||||||| ||| |||||||| ||||||||||||||||||||||| ||||||||||||||||||  ||||||| ||||||||||||||||    
T  46330779 cactcaatattagtctctactcaattcaaatatgtttaatttatgcttaaactctcaagttttttaacaattttttgtagacgcgttaagaacattacta 46330878  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  46330879 aaagttcatccgcaaaaaattatcgcaaaatttgatttatatgtcgagattttattacttttatc 46330943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 45958973 - 45958811
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttt---gtagacgtgttaagaacattact 97  Q
    ||||||||||||||||||| || ||||||||||||||||||| ||||||||||||||||||||| |||||||||   ||||||||||||| |||||||||    
T  45958973 cactcagtattagtctctgttcaattcaaatttgtttaatttctgcttaaactcttaagttttt-aacaatttttttgtagacgtgttaataacattact 45958875  T
Q  98 aaaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattactttta 161  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  45958874 aaaagttcctccgcaaaaaattatttcaaaatttgatttatatgtccagattttattactttta 45958811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 47791818 - 47791982
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgt--agacgtgttaagaacattacta 98  Q
    ||||||||||||||| || ||| ||||||||||||||||||||||||||||||||| ||||||| ||||||||| |  ||||||||||||||||||||||    
T  47791818 cactcagtattagtccctcctcaattcaaatttgtttaatttatgcttaaactcttgagtttttaaacaattttttgcagacgtgttaagaacattacta 47791917  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    |||||||||| |||||||||| |||||||||||||||| || ||||||||||| ||| |||||||    
T  47791918 aaagttcctctgcaaaaaattgtcgcaaaatttgatttctacgtccagattttgttaattttatc 47791982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 99; E-Value: 4e-49
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 46044607 - 46044442
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaa--ttttgtagacgtgttaagaacattacta 98  Q
    ||||||||||||||||||| ||  || |||||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||    
T  46044607 cactcagtattagtctctgttcagtttaaatttgtttaattaatgcttaaactcttaagttttttaacaattttttgtagacgtgttaaaaacattacta 46044508  T
Q  99 aaagttcctccgcaaaaaa-ttatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    || |||| || | |||||| |||||||||||||| ||||||||||||| |||||||||||||||||    
T  46044507 aatgttcatctgtaaaaaatttatcgcaaaattttatttatatgtccaaattttattacttttatc 46044442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 29156280 - 29156119
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaatt--ttgtagacgtgttaagaacattacta 98  Q
    ||||||||||||||||| |||| |||||||||| | |||||||||||||||||||||||||||| |||||||  |||||||| ||||| |||||||| ||    
T  29156280 cactcagtattagtctcggctcaattcaaatttatataatttatgcttaaactcttaagtttttgaacaatttcttgtagacatgttatgaacatta-ta 29156182  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattactttta 161  Q
    |||| |||||| |||||||||||||||||||||||||| |||||||||||| |||| ||||||    
T  29156181 aaaggtcctccacaaaaaattatcgcaaaatttgatttctatgtccagattctattgctttta 29156119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 5 - 188
Target Start/End: Original strand, 15130695 - 15130892
Alignment:
Q  5 cagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgtagacgtgttaagaacattacta------ 98  Q
    ||||||||||||| | || ||| ||||||| |||||||||||||||||||||||||||||||||||||  |||||| |||||||||||||| |           
T  15130695 cagtattagtctcagttcaatttaaatttggttaatttatgcttaaactcttaagttttttaacaatt--gtagacatgttaagaacattattttttttt 15130792  T
Q  99 ----------aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatcgttttcaaaaattcatatttaattc 188  Q
              ||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  15130793 tgaagaagccaaaattcctccgcaaaaaattatcgtaaaatttgatttatatgtccaaattttattacttttatcgttttcaaaaattcatatttaattc 15130892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 24 - 163
Target Start/End: Complemental strand, 43597776 - 43597635
Alignment:
Q  24 attcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgta--gacgtgttaagaacattactaaaagttcctccgcaaaaaattat 121  Q
    |||||||||||||||||||||| |||||||||| ||||||| ||||||||| ||  ||||||||||||||||||||||||||||||  ||||||||||||    
T  43597776 attcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacattactaaaagttcctatgcaaaaaattat 43597677  T
Q  122 cgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    ||||||||||||||| || ||||||||||| ||| |||||||    
T  43597676 cgcaaaatttgatttctacgtccagattttgttaattttatc 43597635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 24 - 161
Target Start/End: Complemental strand, 15653084 - 15652945
Alignment:
Q  24 attcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgtaga--cgtgttaagaacattactaaaagttcctccgcaaaaaattat 121  Q
    ||||||||||||||||||||||||||||||||||| ||||| ||||||||| || |  |||||||||||||||||||||||||||||| |||||||||||    
T  15653084 attcaaatttgtttaatttatgcttaaactcttaaatttttgaacaattttttacaaacgtgttaagaacattactaaaagttcctccacaaaaaattat 15652985  T
Q  122 cgcaaaatttgatttatatgtccagattttattactttta 161  Q
    || |||||||||||| || ||||| ||||| |||||||||    
T  15652984 cgtaaaatttgatttctacgtccaaattttgttactttta 15652945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 87; E-Value: 6e-42
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 4926352 - 4926519
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgt--agacgtgttaagaacattacta 98  Q
    ||||||||||||||| || ||| |||||||||||||||||||||| |||||||||| ||||||| ||||||||| |  ||||||||||||||||||||||    
T  4926352 cactcagtattagtccctcctcaattcaaatttgtttaatttatgtttaaactcttgagtttttaaacaattttttacagacgtgttaagaacattacta 4926451  T
Q  99 aaagttcctcc---gcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    ||||||||| |   |||||||||| |||||||||||||||| || || |||||||| ||| |||||||    
T  4926452 aaagttcctactatgcaaaaaattgtcgcaaaatttgatttctacgttcagattttgttaattttatc 4926519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 7238891 - 7238727
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaa--ttttgtagacgtgttaagaacattacta 98  Q
    ||||||||||||||| || ||| ||||||||||||||||||||||||||||||||| || |||| |||||  ||||| ||||||||||||||||||| ||    
T  7238891 cactcagtattagtccctcctcaattcaaatttgtttaatttatgcttaaactcttgaggttttgaacaattttttgcagacgtgttaagaacattatta 7238792  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    |||| |||||  ||||||||| ||||| |||||||||| || ||||||||||| ||| |||||||    
T  7238791 aaaggtcctctacaaaaaattgtcgcataatttgatttctacgtccagattttgttaattttatc 7238727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 4 - 163
Target Start/End: Original strand, 6588670 - 6588831
Alignment:
Q  4 tcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttt--gtagacgtgttaagaacattactaaaa 101  Q
    |||||||||||| || ||| |||||||||||||||||||||| |||||||||| ||||||| |||||||||  | |||||||||||||||||||||||||    
T  6588670 tcagtattagtccctcctcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaatttttcgcagacgtgttaagaacattactaaaa 6588769  T
Q  102 gttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    |||| ||  ||||||||| | |||||||||||||| || ||||||| ||| ||| |||||||    
T  6588770 gttcatctccaaaaaattgttgcaaaatttgatttctacgtccagaatttgttaattttatc 6588831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 4 - 163
Target Start/End: Original strand, 18058989 - 18059150
Alignment:
Q  4 tcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaa--ttttgtagacgtgttaagaacattactaaaa 101  Q
    ||||||||||||||| ||| |||||||||||||||||||||| |||||||||| ||||||  |||||  ||||| ||||||||||||||  ||||||||     
T  18058989 tcagtattagtctctcctcaattcaaatttgtttaatttatgtttaaactcttgagttttcgaacaaatttttgcagacgtgttaagaaagttactaaag 18059088  T
Q  102 gttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    ||||||| |||||||||| |||||||||||||||| |||||  ||||||| ||| |||||||    
T  18059089 gttcctctgcaaaaaattgtcgcaaaatttgatttttatgtttagattttgttaattttatc 18059150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 21109662 - 21109501
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgt--agacgtgttaagaacattacta 98  Q
    |||| |||||||||| || ||| |||||||||||||| |||||||||||||||||||| ||||| ||||||||| |  | ||||||| ||||||||||||    
T  21109662 cactgagtattagtccctactcaattcaaatttgtttcatttatgcttaaactcttaaatttttgaacaattttttgcatacgtgtttagaacattacta 21109563  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattactttt 160  Q
    |||||||||| |||||||||||| |||||||||||||| ||  || ||||||| ||||||||    
T  21109562 aaagttcctctgcaaaaaattatagcaaaatttgatttctacatcgagattttgttactttt 21109501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 8 - 163
Target Start/End: Original strand, 38199049 - 38199193
Alignment:
Q  8 tattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttt--gtagacgtgttaagaacattactaaaagttc 105  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||||||||||||| ||||||||||    
T  38199049 tattagtctctgctcaattcaaatttgtttaatttattcttaaactcttaagttttttaacaattttttgtagacgtgttaagaacattcctaaaagttc 38199148  T
Q  106 ctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    | |||||             |||||||||||||||||||| |||||||||||||||||    
T  38199149 cgccgca-------------aaatttgatttatatgtccatattttattacttttatc 38199193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 43574219 - 43574380
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaa--ttttgtagacgtgttaagaacattacta 98  Q
    |||| ||||||||||  ||||| |||||||||||||||||||||| |||||||||||||||||| |||||  ||||| |||| |||| ||||||||||||    
T  43574219 cactgagtattagtccatgctcaattcaaatttgtttaatttatgtttaaactcttaagtttttgaacaattttttgcagacatgtttagaacattacta 43574318  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattactttt 160  Q
     ||||| || |||||||||||||||||||||||||||| ||  || | ||||||||||||||    
T  43574319 taagttacttcgcaaaaaattatcgcaaaatttgatttctacatctaaattttattactttt 43574380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 8 - 160
Target Start/End: Complemental strand, 4900171 - 4900018
Alignment:
Q  8 tattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgt--agacgtgttaagaacattactaaaagttc 105  Q
    |||||||| || ||| ||||||||||||||||||||| ||||||||||||||||||| ||||||||| |  |||| |||| ||||||||| |||||||||    
T  4900171 tattagtccctactcaattcaaatttgtttaatttatacttaaactcttaagttttt-aacaattttttgcagacttgtttagaacattaataaaagttc 4900073  T
Q  106 ctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattactttt 160  Q
    || ||| |||||||||||||||||||||||| ||  |||||||||| ||||||||    
T  4900072 cttcgcgaaaaattatcgcaaaatttgatttctacatccagattttgttactttt 4900018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 8 - 115
Target Start/End: Complemental strand, 43084150 - 43084041
Alignment:
Q  8 tattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaa--ttttgtagacgtgttaagaacattactaaaagttc 105  Q
    ||||||||||| ||| ||||||||||||||||||||| |||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| |    
T  43084150 tattagtctctactcaattcaaatttgtttaatttattcttaaactcttaagttttttaacaattttttgtagacgtgttaagaacattactaaaagtac 43084051  T
Q  106 ctccgcaaaa 115  Q
    | ||||||||    
T  43084050 cgccgcaaaa 43084041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 4883928 - 4883776
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgta--gacgtgttaagaacattacta 98  Q
    ||||||||||||||  || ||| ||| |||||||||||||||||| |||||||||| ||||||| || |||||| ||  |||||||||||||||||||||    
T  4883928 cactcagtattagttcctcctcaatttaaatttgtttaatttatgtttaaactcttgagtttttgaataattttttacagacgtgttaagaacattacta 4883829  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagatttt 151  Q
    || ||||||  |||||||||| |||||||||||||||| || |||||||||||    
T  4883828 aacgttcctatgcaaaaaattgtcgcaaaatttgatttctacgtccagatttt 4883776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 22378773 - 22378609
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgta--gacgtgttaagaacattacta 98  Q
    |||||||||||||||||| ||| ||| ||||||||||||||||| |||||||| || ||||||| |||| |||| ||  ||| |||||||||| ||||||    
T  22378773 cactcagtattagtctctcctcaatttaaatttgtttaatttatacttaaactattgagtttttgaacagttttttacagacatgttaagaacgttacta 22378674  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    |||||||||  |||||||| | |||||||||||||||| || ||||||||||| ||| |||||||    
T  22378673 aaagttcctatgcaaaaaaatgtcgcaaaatttgatttctacgtccagattttgttaattttatc 22378609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 25 - 163
Target Start/End: Complemental strand, 14990837 - 14990697
Alignment:
Q  25 ttcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgt--agacgtgttaagaacattactaaaagttcctccgcaaaaaattatc 122  Q
    |||||||||||||||||||| ||||||||||| ||||||| ||||||||| |  | |||||||| ||||||||||||||||||||| |||||||||||||    
T  14990837 ttcaaatttgtttaatttattcttaaactcttgagtttttgaacaattttttgcatacgtgttaggaacattactaaaagttcctctgcaaaaaattatc 14990738  T
Q  123 gcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    | |||||||||||| ||  | |||||||| ||| |||||||    
T  14990737 gtaaaatttgatttctacattcagattttgttaattttatc 14990697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 25 - 163
Target Start/End: Complemental strand, 15420448 - 15420308
Alignment:
Q  25 ttcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgt--agacgtgttaagaacattactaaaagttcctccgcaaaaaattatc 122  Q
    |||||||||||||||||||| ||||||||||| ||||||| ||||||||| |  | |||||||| ||||||||||||||||||||| |||||||||||||    
T  15420448 ttcaaatttgtttaatttattcttaaactcttgagtttttgaacaattttttgcatacgtgttaggaacattactaaaagttcctctgcaaaaaattatc 15420349  T
Q  123 gcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    | |||||||||||| ||  | |||||||| ||| |||||||    
T  15420348 gtaaaatttgatttctacattcagattttgttaattttatc 15420308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 8 - 163
Target Start/End: Original strand, 3495643 - 3495787
Alignment:
Q  8 tattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttt--gtagacgtgttaagaacattactaaaagttc 105  Q
    |||||||| ||| || ||||||||||||||||||||| ||||||| |||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  3495643 tattagtccctgatcaattcaaatttgtttaatttattcttaaacgcttaagttttttaacaattttttgtagacgtgttaagaacattactaaaagttc 3495742  T
Q  106 ctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    | || ||||             |||||||||||||||||| |||||||||||||||||    
T  3495743 cgccacaaa-------------atttgatttatatgtccatattttattacttttatc 3495787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 38158928 - 38159085
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaa----ctcttaagttttttaacaattttgt---agacgtgttaagaacat 93  Q
    |||||| |||||||| || ||| |||||||||||||||||||||| |||||    ||||| ||||||| ||||||||| |   |||||||||||||||||    
T  38158928 cactcaatattagtccctcctcaattcaaatttgtttaatttatgtttaaattaactcttgagtttttgaacaatttttttacagacgtgttaagaacat 38159027  T
Q  94 tactaaaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagatttt 151  Q
    ||||||||||||||  |||||||||| |||||||||||||||| ||  ||||||||||    
T  38159028 tactaaaagttcctatgcaaaaaattgtcgcaaaatttgatttctacctccagatttt 38159085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 44080938 - 44081102
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaa--ttttgtagacgtgttaagaacattacta 98  Q
    |||| |||||||||| || ||| ||||||| |||||||||| |||||||||||||||||||||  ||||   ||||| | |||||||||||||| |||||    
T  44080938 cacttagtattagtccctactcaattcaaacttgtttaatt-atgcttaaactcttaagttttcaaacatgcttttgcaaacgtgttaagaacaatacta 44081036  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccaga-ttttattacttttatc 163  Q
    |||||||||||||||||||| |||||||||||| |||| || ||||| | |||| |||||||||||    
T  44081037 aaagttcctccgcaaaaaatgatcgcaaaatttaatttctacgtccatatttttgttacttttatc 44081102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 35482371 - 35482207
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgt--agacgtgttaagaacattacta 98  Q
    |||||||||||||||  | ||| |||||||||||||||||||||| ||||||| || ||||||| ||||||||| |  | || ||||||||| |||| ||    
T  35482371 cactcagtattagtcctttctcaattcaaatttgtttaatttatgtttaaactattgagtttttgaacaattttttgcatacatgttaagaaaattatta 35482272  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    |||||||||| |||||||||| ||  |||||||||||| || ||||||||||| ||| |||||||    
T  35482271 aaagttcctctgcaaaaaattgtcctaaaatttgatttctacgtccagattttgttaattttatc 35482207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 6 - 163
Target Start/End: Original strand, 1961882 - 1962041
Alignment:
Q  6 agtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgta--gacgtgttaagaacattactaaaagt 103  Q
    ||||| |||| || ||| |||||||||||||| ||||||||||||| | || ||||||| |||||||||  |  |||||||| |||||||||||||||||    
T  1961882 agtatcagtccctcctcaattcaaatttgtttcatttatgcttaaatttttgagtttttgaacaatttttcacagacgtgtttagaacattactaaaagt 1961981  T
Q  104 tcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    || || |||||||||| ||||||||||| |||| || ||||||||||| ||| |||||||    
T  1961982 tcatctgcaaaaaattgtcgcaaaatttaatttctacgtccagattttgttaattttatc 1962041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 193
Target Start/End: Complemental strand, 16081082 - 16080889
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaatt--ttgtagacgtgttaagaacattacta 98  Q
    |||||||| |||||||||| |  ||  |||||||||||||| |||||||||||||||||||||  |||||||  ||||| || |||||| || |||||||    
T  16081082 cactcagttttagtctctgttaaatcgaaatttgtttaatt-atgcttaaactcttaagttttcgaacaattatttgtatacatgttaaaaatattacta 16080984  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccaga-ttttattacttttatcgttttcaaaaattcatatttaattcatttc 193  Q
    |||||||||| |||||||| |||| |||| |||||||| ||  |||||| |||| |||||||||||| ||| |||||||||||||  |||||||||    
T  16080983 aaagttcctctgcaaaaaagtatctcaaattttgatttctacatccagatttttgttacttttatcg-tttaaaaaattcatattccattcatttc 16080889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 11397273 - 11397110
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaa--ttttgtagacgtgttaagaacattacta 98  Q
    |||||||||||| || || | | |||||||||||||||||||||| | |||||||||||||||| |||||  ||||| | ||||||||| |||||| |||    
T  11397273 cactcagtattattccctacacaattcaaatttgtttaatttatgttcaaactcttaagtttttgaacaatcttttgcatacgtgttaaaaacattgcta 11397174  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    |||||||||  | |||||| ||||| |||||||||||| |||||  ||| ||| |||||||||||    
T  11397173 aaagttcctttgtaaaaaaatatcggaaaatttgatttctatgtttaga-tttgttacttttatc 11397110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 24 - 151
Target Start/End: Complemental strand, 9633460 - 9633333
Alignment:
Q  24 attcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgt--agacgtgttaagaacattactaaaagttcctccgcaaaaaattat 121  Q
    |||||||||||||||||| |||||||||||||||||||||  ||||||||| |  |||  | ||| ||||||||||||||||||||||||||||| ||||    
T  9633460 attcaaatttgtttaatt-atgcttaaactcttaagttttg-aacaattttttgcagatattttatgaacattactaaaagttcctccgcaaaaatttat 9633363  T
Q  122 cgcaaaatttgatttatatgtccagatttt 151  Q
    | |||||| |||||| ||| |||| |||||    
T  9633362 ctcaaaatgtgatttttatatccaaatttt 9633333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 38598947 - 38599099
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttt--gtagacgtgttaagaacattacta 98  Q
    |||||| ||||||||  | ||| || |||||||||||||||||||||||||||||||||||||| |||||||||    ||||||||||||||| ||| ||    
T  38598947 cactcaatattagtccttactcaatccaaatttgtttaatttatgcttaaactcttaagtttttcaacaatttttcacagacgtgttaagaacgttatta 38599046  T
Q  99 aaagttcctccgcaaaaaattatcgc-aaaatttgatttatatgtccagatttt 151  Q
    || | ||||||  |||||| |||||| |||||||||||| || ||||| |||||    
T  38599047 aatggtcctcc-aaaaaaaatatcgcaaaaatttgatttctacgtccatatttt 38599099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 38199883 - 38199810
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttt 74  Q
    |||| ||||||||||  || || |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38199883 cacttagtattagtccttgatcaattcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttt 38199810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 24 - 151
Target Start/End: Original strand, 1260143 - 1260271
Alignment:
Q  24 attcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgt--agacgtgttaagaacattactaaaagttcctccgcaaaaaattat 121  Q
    ||||||| |||||||||| ||| ||||||| |||||||||| | ||||||| |  ||||||||||| |||||| |||||||||||||| |||||||||||    
T  1260143 attcaaaattgtttaatt-atgtttaaacttttaagtttttaagcaattttttgaagacgtgttaaaaacattgctaaaagttcctccacaaaaaattat 1260241  T
Q  122 cgcaaaatttgatttatatgtccagatttt 151  Q
    | | |||||| |||| ||||| || |||||    
T  1260242 ctctaaatttaatttctatgttcaaatttt 1260271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 24 - 159
Target Start/End: Complemental strand, 1544766 - 1544630
Alignment:
Q  24 attcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgt-agacgtgttaagaacattactaaaagttcctccgcaaaaaattatc 122  Q
    |||||||||||||| ||||||||||||||| | ||||| || |||||||||   | ||||||||||||||||| |||||||| || | |||||  |||||    
T  1544766 attcaaatttgtttgatttatgcttaaactttaaagttgttgaacaatttttccatacgtgttaagaacattattaaaagttacttcacaaaagcttatc 1544667  T
Q  123 gcaaaatttgatttatatgtccagattttattacttt 159  Q
    | |||||||||||| ||  ||| |||||| |||||||    
T  1544666 gtaaaatttgatttctacatcccgattttgttacttt 1544630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 79 - 151
Target Start/End: Complemental strand, 27727464 - 27727392
Alignment:
Q  79 acgtgttaagaacattactaaaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagatttt 151  Q
    ||||||||||||||||||||||| ||||||  ||||||||| |||||||||||||||| || |||||||||||    
T  27727464 acgtgttaagaacattactaaaaattcctctacaaaaaattgtcgcaaaatttgatttctacgtccagatttt 27727392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 28 - 128
Target Start/End: Complemental strand, 37108686 - 37108587
Alignment:
Q  28 aaatttgtttaatttatgcttaaactcttaagttttttaacaattttgtagacgtgttaagaacattactaaaagttcctccgcaaaaaattatcgcaaa 127  Q
    ||||||| |||||| ||||||||||| ||||| |||| |||||||||| | | |||||||||||||||| |||||||| || ||||||||||||| ||||    
T  37108686 aaatttgcttaatt-atgcttaaacttttaagattttgaacaattttgcacaagtgttaagaacattacgaaaagttcatctgcaaaaaattatctcaaa 37108588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 36020108 - 36020005
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgt--agacgtgttaagaacattacta 98  Q
    |||||||||||||||||  ||| ||| ||||||||||||||||| ||||||||||| ||||||| ||||||||| |  | | |||| |||||||||||||    
T  36020108 cactcagtattagtctc--ctcaatttaaatttgtttaatttatacttaaactcttgagtttttaaacaattttttacaaatgtgtcaagaacattacta 36020011  T
Q  99 aaagtt 104  Q
    ||||||    
T  36020010 aaagtt 36020005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 28 - 162
Target Start/End: Complemental strand, 1066691 - 1066555
Alignment:
Q  28 aaatttgtttaatttatgcttaaactcttaagttttttaacaattttgtagac--gtgttaagaacattactaaaagttcctccgcaaaaaattatcgca 125  Q
    |||||||||||||| ||||||||||| ||||| |||| ||||||||| |  ||  |||||||||||||||| |||||||| |  ||||||||| ||| ||    
T  1066691 aaatttgtttaatt-atgcttaaacttttaagattttgaacaattttttgcacaagtgttaagaacattacgaaaagttcatatgcaaaaaatgatctca 1066593  T
Q  126 aaatttgatttatatgtccag-attttattacttttat 162  Q
    |||||| |||| || |||||| ||||| ||||||||||    
T  1066592 aaattttatttctacgtccagaattttgttacttttat 1066555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 3496498 - 3496425
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttt 74  Q
    |||| ||||||||||  | ||| ||| |||||||||||||| ||||||||||||||||||||||||||||||||    
T  3496498 cactaagtattagtccttactcaatttaaatttgtttaattcatgcttaaactcttaagttttttaacaatttt 3496425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 28 - 136
Target Start/End: Original strand, 8081814 - 8081923
Alignment:
Q  28 aaatttgtttaatttatgcttaaactcttaagttttttaacaattttgtagac--gtgttaagaacattactaaaagttcctccgcaaaaaattatcgca 125  Q
    |||||||||||||| ||||||||||| ||||| |||| ||||||||| |  ||  |||||||||||||||| |||||||| ||  |||||||||||| ||    
T  8081814 aaatttgtttaatt-atgcttaaacttttaagattttgaacaattttttgcacaagtgttaagaacattacgaaaagttcatctccaaaaaattatctca 8081912  T
Q  126 aaatttgattt 136  Q
    |||||| ||||    
T  8081913 aaattttattt 8081923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 15131644 - 15131589
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactctt 56  Q
    ||||||||||||||  |||||| |||||||||||||||||||||||||||||||||    
T  15131644 cactcagtattagttcctgctcaattcaaatttgtttaatttatgcttaaactctt 15131589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 45958085 - 45958140
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactctt 56  Q
    |||||| ||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  45958085 cactcaatattagtctctgctcaattcaaatttgttcaatttatgcttaaactctt 45958140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 70 - 163
Target Start/End: Complemental strand, 10620765 - 10620671
Alignment:
Q  70 attttgtagacgtgttaagaacattactaaaagttcctccgcaaaaaa-ttatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    |||||||| || ||||||||||||||||||||| | ||| |||||||| || |  |||||||||||||||| ||||| ||||| |||||||||||    
T  10620765 attttgtatacatgttaagaacattactaaaagcttctctgcaaaaaaattgttacaaaatttgatttatacgtccatattttgttacttttatc 10620671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 27728050 - 27728000
Alignment:
Q  24 attcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttt 74  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  27728050 attcaaatttgtttaatttatgcttaaactcttgagtttttgaacaatttt 27728000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 43083307 - 43083381
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaag-ttttttaacaatttt 74  Q
    |||||| ||||||||  | ||| ||||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  43083307 cactcactattagtccttactcaattcaaatttgtttaatttatacttaaactcttaagtttttttaacaatttt 43083381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 84 - 136
Target Start/End: Original strand, 37539849 - 37539901
Alignment:
Q  84 ttaagaacattactaaaagttcctccgcaaaaaattatcgcaaaatttgattt 136  Q
    ||||||||||||||||||||||||| | ||||||||||| |||||||||||||    
T  37539849 ttaagaacattactaaaagttcctctgtaaaaaattatctcaaaatttgattt 37539901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 44167124 - 44167176
Alignment:
Q  4 tcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactctt 56  Q
    |||||||||||| |||||| ||||||||||||| |||||||||||||||||||    
T  44167124 tcagtattagtccctgctcaattcaaatttgttcaatttatgcttaaactctt 44167176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 46043643 - 46043698
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactctt 56  Q
    |||||| ||||||||||| ||| ||||||||||||| |||||||||||||||||||    
T  46043643 cactcaatattagtctctactcaattcaaatttgttcaatttatgcttaaactctt 46043698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 46331682 - 46331627
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactctt 56  Q
    ||||||||||||||| |||||| ||||||||||||| || ||||||||||||||||    
T  46331682 cactcagtattagtccctgctcaattcaaatttgttcaagttatgcttaaactctt 46331627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 33625721 - 33625667
Alignment:
Q  2 actcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactctt 56  Q
    |||||||||||||| |||||| ||||||||||||| |||||||| ||||||||||    
T  33625721 actcagtattagtccctgctcaattcaaatttgttcaatttatgattaaactctt 33625667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 30 - 151
Target Start/End: Complemental strand, 42974394 - 42974272
Alignment:
Q  30 atttgtttaatttatgcttaaactcttaagttttttaacaattttgtagac--gtgttaagaacattactaaaagttcctccgcaaaaaattatcgcaaa 127  Q
    |||||||||||| ||||||||||| ||||| |||| ||||||||| |  ||  |||| ||||||||||| |||||||| ||  |||||| ||||| ||||    
T  42974394 atttgtttaatt-atgcttaaacttttaagattttaaacaattttttgcacaagtgtcaagaacattacgaaaagttcatctccaaaaacttatctcaaa 42974296  T
Q  128 atttgatttatatgtccagatttt 151  Q
    |||| |||| |  |||||||||||    
T  42974295 attttatttctgcgtccagatttt 42974272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 37537488 - 37537537
Alignment:
Q  24 attcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttt 74  Q
    ||||||||||| |||||| |||||||||||||||||||||| |||||||||    
T  37537488 attcaaatttggttaatt-atgcttaaactcttaagtttttgaacaatttt 37537537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 24 - 151
Target Start/End: Original strand, 41571469 - 41571596
Alignment:
Q  24 attcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgt--agacgtgttaagaacattactaaaagttcctccgcaaaaaattat 121  Q
    ||||||||||||| |||| ||||||| ||| ||||||| || ||||||||| |  |||| | |||||||||||| |||| |||||||  |||| |||||     
T  41571469 attcaaatttgttgaatt-atgcttacacttttaagttcttgaacaattttttttagacatattaagaacattagtaaa-gttcctctccaaataattag 41571566  T
Q  122 cgcaaaatttgatttatatgtccagatttt 151  Q
    | ||||||||||||| || |||| ||||||    
T  41571567 ctcaaaatttgatttctacgtcctgatttt 41571596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 188
Target Start/End: Original strand, 46330948 - 46330981
Alignment:
Q  155 acttttatcgttttcaaaaattcatatttaattc 188  Q
    ||||||||||||||||||||||||||||||||||    
T  46330948 acttttatcgttttcaaaaattcatatttaattc 46330981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 6330934 - 6330978
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatg 45  Q
    ||||||||||||||||||  || ||||||||||||||||||||||    
T  6330934 cactcagtattagtctctcttcaattcaaatttgtttaatttatg 6330978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 28 - 151
Target Start/End: Original strand, 8832715 - 8832840
Alignment:
Q  28 aaatttgtttaatttatgcttaaactcttaagttttttaacaa--ttttgtagacgtgttaagaac-attactaaaagttcctccgcaaaaaattatcgc 124  Q
    |||||||||||||| ||||||||||| ||||| ||||||||||  ||||| | | |||| |||||| ||||| |||||||| ||  | || ||||||| |    
T  8832715 aaatttgtttaatt-atgcttaaacttttaagatttttaacaattttttgcacaagtgtcaagaactattacgaaaagttcatctccgaataattatctc 8832813  T
Q  125 aaaatttgatttatatgtccagatttt 151  Q
    ||||||| |||| |  |||||||||||    
T  8832814 aaaattttatttctgcgtccagatttt 8832840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 28 - 151
Target Start/End: Original strand, 28924503 - 28924624
Alignment:
Q  28 aaatttgtttaatttatgcttaaactcttaagttttttaacaatttt--gtagacgtgttaagaacattactaaaagttcctccgcaaaaaattatcgca 125  Q
    |||||||||||||| ||||||||| || |||  || | |||||||||  ||| || | |||||||||||| |||||||||||| |||||| |||||| |     
T  28924503 aaatttgtttaatt-atgcttaaattcgtaaacttataaacaattttttgtaaactttttaagaacatta-taaaagttcctctgcaaaatattatctc- 28924599  T
Q  126 aaatttgatttatatgtccagatttt 151  Q
     |||||||||| || |||||||||||    
T  28924600 -aatttgatttctacgtccagatttt 28924624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 89 - 163
Target Start/End: Complemental strand, 36019988 - 36019913
Alignment:
Q  89 aacattactaaaagttcctccgcaaaaaa-ttatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    |||||||||||||||| ||  |||||||| || |||||||||||||||| || ||| ||||||| ||| |||||||    
T  36019988 aacattactaaaagtttctatgcaaaaaaattgtcgcaaaatttgatttctacgtctagattttgttaattttatc 36019913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 38593281 - 38593358
Alignment:
Q  28 aaatttgtttaatttatgcttaaactcttaagttttttaacaa--ttttgtagacgtgttaagaacattactaaaagtt 104  Q
    |||||||||||||| ||||||||||| ||||| |||| |||||  ||||| | | |||||||||||||||| |||||||    
T  38593281 aaatttgtttaatt-atgcttaaacttttaagattttgaacaattttttgcaaaagtgttaagaacattacgaaaagtt 38593358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 110 - 151
Target Start/End: Original strand, 6330986 - 6331027
Alignment:
Q  110 gcaaaaaattatcgcaaaatttgatttatatgtccagatttt 151  Q
    |||||||||| ||| |||||||||||| ||||||||||||||    
T  6330986 gcaaaaaattgtcgtaaaatttgatttctatgtccagatttt 6331027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 164; Significance: 7e-88; HSPs: 64)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 164; E-Value: 7e-88
Query Start/End: Original strand, 1 - 193
Target Start/End: Complemental strand, 8218313 - 8218119
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttt--gtagacgtgttaagaacattacta 98  Q
    ||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  8218313 cactcagtattagtccctgctcaattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttttgtagacgtgttaagaacattacta 8218214  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatcgttttcaaaaattcatatttaattcatttc 193  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  8218213 aaagttcctccgcaaaaaattattgcaaaatttgatttatatgtccagattttattacttttatcgttttaaaaaattcatatttaattcgtttc 8218119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 156; E-Value: 4e-83
Query Start/End: Original strand, 1 - 193
Target Start/End: Complemental strand, 43441175 - 43440981
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttt--gtagacgtgttaagaacattacta 98  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| ||||||||||||||| ||    
T  43441175 cactcagtattagtctttgctcaattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttttgtagatgtgttaagaacattatta 43441076  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatcgttttcaaaaattcatatttaattcatttc 193  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| ||||    
T  43441075 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccatattttattacttttatcgttttcaaaaattcatattgaattcgtttc 43440981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 41139005 - 41139169
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttt--gtagacgtgttaagaacattacta 98  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||  |||||| |||||||||||||||||    
T  41139005 cactcagtattagtctctgctcaattcaaatttgtttaatttatgcttaatctcttaagttttttaacaattttttgtagacatgttaagaacattacta 41139104  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41139105 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 41139169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 130; E-Value: 1e-67
Query Start/End: Original strand, 5 - 163
Target Start/End: Original strand, 13920047 - 13920207
Alignment:
Q  5 cagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttt--gtagacgtgttaagaacattactaaaag 102  Q
    ||||||||||||||| || |||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||||||||||||||||||| ||||||    
T  13920047 cagtattagtctctgttcaattcaaatttgtttaatttatgcttaaactattaagttttttaacaattttttgtagacgtgttaagaacattaataaaag 13920146  T
Q  103 ttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  13920147 ttcctccgcaaaaaattatcgcaaaatttgatttatatgtccaaattttattacttttatc 13920207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 117; E-Value: 8e-60
Query Start/End: Original strand, 6 - 163
Target Start/End: Complemental strand, 24637249 - 24637090
Alignment:
Q  6 agtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttt--gtagacgtgttaagaacattactaaaagt 103  Q
    ||||||| || || ||| ||||||||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  24637249 agtattaatccctactcaattcaaatttgattaatttatgcttaaactcttaagttttttaacaattttttgtagacgtgttaagaacattactaaaagt 24637150  T
Q  104 tcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    ||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||    
T  24637149 tcctccgcaaaaaattatcgcaaaatttgatttctacttccagattttattacttttatc 24637090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 16966041 - 16965878
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaat--tttgtagacgtgttaagaacattacta 98  Q
    |||||| |||||||  ||| || ||| |||||||||||||||||| ||||| ||||| |||||||||||||  |||||||||||||||||||||||||||    
T  16966041 cactcaatattagtacctgttcaatttaaatttgtttaatttatgtttaaagtcttacgttttttaacaatattttgtagacgtgttaagaacattacta 16965942  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttat 162  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  16965941 aaagttcctccgcaaaaaattatcgcaaaatttgatttttatgtccagattttattacttttat 16965878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 10 - 193
Target Start/End: Complemental strand, 26865986 - 26865814
Alignment:
Q  10 ttagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaa--ttttgtagacgtgttaagaacattactaaaagttcct 107  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||     
T  26865986 ttagtctctgctcaattcaaatttgtttaatttattcttaaactcttaagttttttaacaattttttgtagacgtgttaagaacattactaaaagttccg 26865887  T
Q  108 ccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatcgttttcaaaaattcatatttaattcatttc 193  Q
    |             |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||||    
T  26865886 c-------------cgcaaaatttgatttatatgtccatattttattacttttattgttttcaaaaattcatatttaattcgtttc 26865814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 99; E-Value: 4e-49
Query Start/End: Original strand, 2 - 163
Target Start/End: Complemental strand, 42877924 - 42877762
Alignment:
Q  2 actcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttt-gtagacgtgttaagaacattactaaa 100  Q
    ||||| |||||||| || ||| |||||||||||||||||| |||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||    
T  42877924 actcaatattagtccctcctcaattcaaatttgtttaattcatgcttaaactcttgagtttttaaacaatttttgtagacgtgttaagaacattactaaa 42877825  T
Q  101 agttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    |||||||| |||||||||| ||||||||||| |||| || ||||||||||| ||| |||||||    
T  42877824 agttcctctgcaaaaaattgtcgcaaaattttatttctacgtccagattttgttaattttatc 42877762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 10463717 - 10463881
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgta--gacgtgttaagaacattacta 98  Q
    ||||||||||||||| || ||| |||||||||||||||||||||| |||||||||| ||||||| ||||||||| ||  |||||||||||||||||||||    
T  10463717 cactcagtattagtccctcctcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacattacta 10463816  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    |||||||||  |||||||||| |||||||||||||||| || ||||||||||| ||| |||||||    
T  10463817 aaagttcctatgcaaaaaattgtcgcaaaatttgatttctacgtccagattttgttaattttatc 10463881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 8336823 - 8336987
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgta--gacgtgttaagaacattacta 98  Q
    ||||||||||||||| || ||| |||||||||||||||||||||| |||||||||| ||||||| ||||||||| ||  |||||||||||||||||||||    
T  8336823 cactcagtattagtccctcctcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttactgacgtgttaagaacattacta 8336922  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    |||||||||  |||||||||| |||||||||||||||| || ||| ||||||| ||| |||||||    
T  8336923 aaagttcctatgcaaaaaattgtcgcaaaatttgatttctacgtctagattttgttaattttatc 8336987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 6 - 193
Target Start/End: Complemental strand, 4462260 - 4462070
Alignment:
Q  6 agtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgt----agacgtgttaagaacattactaaaa 101  Q
    |||||||||| || ||| |||||||| |||||||||||||||||||||||||||||||| ||||||||| |    | ||||||| |||||||||||||||    
T  4462260 agtattagtccctactcaattcaaatgtgtttaatttatgcttaaactcttaagtttttgaacaattttttgcatatacgtgtttagaacattactaaaa 4462161  T
Q  102 gttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatcgttttcaaaaattcatatttaattcatttc 193  Q
    ||||||||||||||| |||||| |||||| ||||| ||  |||||||||| || | ||| ||||||| ||||||||||||||||||| ||||    
T  4462160 gttcctccgcaaaaacttatcgtaaaattagatttctacatccagattttgttgc-tttgtcgttttaaaaaattcatatttaattcgtttc 4462070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 5 - 151
Target Start/End: Original strand, 2003936 - 2004084
Alignment:
Q  5 cagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaa--ttttgtagacgtgttaagaacattactaaaag 102  Q
    ||||||||||| ||  || ||||||||||||||||||||||||||||||||| ||||||| |||||  |||||   ||||||||||||||||||||||||    
T  2003936 cagtattagtcacttttcaattcaaatttgtttaatttatgcttaaactcttgagtttttgaacaactttttgcgtacgtgttaagaacattactaaaag 2004035  T
Q  103 ttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagatttt 151  Q
    ||| || |||||||||| |||||||||||||||| ||||||||||||||    
T  2004036 ttcatctgcaaaaaattgtcgcaaaatttgatttttatgtccagatttt 2004084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 37103012 - 37103176
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgtaga--cgtgttaagaacattacta 98  Q
    |||| ||||||||||||| ||| ||||||||||||||||||||||| ||||||||| | ||||| || |||||| || |  |||||||||||||||||||    
T  37103012 cacttagtattagtctcttctcaattcaaatttgtttaatttatgcataaactcttgaatttttgaataattttttacaaacgtgttaagaacattacta 37103111  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    |||||||||| ||||||||||||| |||||||| |||| || ||||||||||| ||| |||||||    
T  37103112 aaagttcctctgcaaaaaattatctcaaaatttaatttctacgtccagattttgttaattttatc 37103176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 8404710 - 8404546
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgt--agacgtgttaagaacattacta 98  Q
    ||||||||||||||| || ||| |||||| |||||||||||||||||||||||||| | ||||| ||||||||| |  ||||||||||||||||||||||    
T  8404710 cactcagtattagtccctcctcaattcaagtttgtttaatttatgcttaaactcttgaatttttaaacaattttttgcagacgtgttaagaacattacta 8404611  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    ||| ||| || ||||||| || |||||||||||||||| || || || ||||||||| |||||||    
T  8404610 aaaattcatctgcaaaaagttgtcgcaaaatttgatttttaagttcaaattttattaattttatc 8404546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 3 - 161
Target Start/End: Complemental strand, 22023380 - 22023220
Alignment:
Q  3 ctcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttt--gtagacgtgttaagaacattactaaa 100  Q
    |||| ||||||||  | ||| ||||||||||||||||||||||||||||||||| | ||||| |||||||||  ||||||||||||||||||||||||||    
T  22023380 ctcaatattagtccatcctcaattcaaatttgtttaatttatgcttaaactcttgaatttttgaacaattttttgtagacgtgttaagaacattactaaa 22023281  T
Q  101 agttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattactttta 161  Q
    |||||||| | |||||||| |||||||||||||||| || ||||  ||||| ||| |||||    
T  22023280 agttcctcggtaaaaaattgtcgcaaaatttgatttctacgtccgaattttgttaatttta 22023220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 27335610 - 27335774
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaa--ttttgtagacgtgttaagaacattacta 98  Q
    |||||| |||||||| || ||| ||||||||||||||||||||||||||||||||| ||||||| |||||  ||||| | | ||||||||||||||||||    
T  27335610 cactcaatattagtccctcctcaattcaaatttgtttaatttatgcttaaactcttgagtttttaaacaattttttgcatatgtgttaagaacattacta 27335709  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    |||||||||| | |||||||| |||||||||||||||| || | ||| ||||| ||| |||||||    
T  27335710 aaagttcctctgtaaaaaattgtcgcaaaatttgatttttacgcccatattttgttaattttatc 27335774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 4 - 162
Target Start/End: Original strand, 8313192 - 8313352
Alignment:
Q  4 tcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgt--agacgtgttaagaacattactaaaa 101  Q
    |||||||||||| || ||| |||||||||||||||||||||| |||||||||| ||||||| ||||||||| |  | ||||||||||||||||| |||||    
T  8313192 tcagtattagtcccttctcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacatacgtgttaagaacattattaaaa 8313291  T
Q  102 gttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttat 162  Q
    |||| |  |||||||||| |||||||||||||||| || ||||| ||||| ||| ||||||    
T  8313292 gttcttatgcaaaaaattgtcgcaaaatttgatttctacgtccatattttgttaattttat 8313352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 27307799 - 27307963
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgt--agacgtgttaagaacattacta 98  Q
    ||||||||||||||  || ||| |||||||||||||||||||||| |||||||||| ||||||| ||||||||| |  ||||||||||| |||||||||     
T  27307799 cactcagtattagttcctcctcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaaaaacattactg 27307898  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    |||||| ||  |||||||||| |||||||||||||||| || ||| ||||||| ||| |||||||    
T  27307899 aaagtttctatgcaaaaaattgtcgcaaaatttgatttctacgtcaagattttgttaattttatc 27307963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 24 - 163
Target Start/End: Complemental strand, 34785541 - 34785401
Alignment:
Q  24 attcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgt-agacgtgttaagaacattactaaaagttcctccgcaaaaaattatc 122  Q
    |||||||||||||||||||||||||||||| || |||||||  |||||||| | |||||||||||||| ||||||||||||||||  |||||||||| ||    
T  34785541 attcaaatttgtttaatttatgcttaaacttttgagtttttgtacaattttttcagacgtgttaagaatattactaaaagttcctttgcaaaaaattgtc 34785442  T
Q  123 gcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    |||||||||||||| || ||||| ||||| ||| |||||||    
T  34785441 gcaaaatttgatttttacgtccaaattttgttaattttatc 34785401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 75; E-Value: 9e-35
Query Start/End: Original strand, 24 - 163
Target Start/End: Complemental strand, 1683457 - 1683316
Alignment:
Q  24 attcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgt--agacgtgttaagaacattactaaaagttcctccgcaaaaaattat 121  Q
    ||||||||||||||||||||||||||||||||| |||||||  | |||||| |  |||| |||||| |||||||||||||| ||||  |||||||||| |    
T  1683457 attcaaatttgtttaatttatgcttaaactcttgagtttttggataattttttgcagacatgttaacaacattactaaaagctcctatgcaaaaaattgt 1683358  T
Q  122 cgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    | |||||||||||||||| ||||| |||||||||||||||||    
T  1683357 cacaaaatttgatttatacgtccatattttattacttttatc 1683316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 75; E-Value: 9e-35
Query Start/End: Original strand, 8 - 163
Target Start/End: Original strand, 34527017 - 34527161
Alignment:
Q  8 tattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttt--gtagacgtgttaagaacattactaaaagttc 105  Q
    ||||||||||||||| ||||||||||||||||||||| |||| ||||||||||| ||||||||||||  |||||||||||||||||||||||||| ||||    
T  34527017 tattagtctctgctcaattcaaatttgtttaatttattcttatactcttaagttgtttaacaattttttgtagacgtgttaagaacattactaaatgttc 34527116  T
Q  106 ctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    | |||||             |||||||||||||||||||| |||||||||||||||||    
T  34527117 cgccgca-------------aaatttgatttatatgtccatattttattacttttatc 34527161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 25 - 163
Target Start/End: Complemental strand, 621917 - 621777
Alignment:
Q  25 ttcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttt--gtagacgtgttaagaacattactaaaagttcctccgcaaaaaattatc 122  Q
    ||||||||| ||||||||||||||||||| || ||||||| |||||||||  | ||||||||||| |||||||||||||||||||| |||||||||| ||    
T  621917 ttcaaatttctttaatttatgcttaaacttttgagtttttgaacaatttttggcagacgtgttaaaaacattactaaaagttcctctgcaaaaaattgtc 621818  T
Q  123 gcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    ||||||| |||||| ||  |||||||||| ||| |||||||    
T  621817 gcaaaatgtgatttctacatccagattttgttaattttatc 621777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 9687818 - 9687715
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaa--ttttgtagacgtgttaagaacattacta 98  Q
    ||||||||||||||| || ||| ||||||||||||||||||||||||||||||||||||||||| |||||  ||||| ||||||||||||||||||||||    
T  9687818 cactcagtattagtccctcctcaattcaaatttgtttaatttatgcttaaactcttaagtttttgaacaattttttgcagacgtgttaagaacattacta 9687719  T
Q  99 aaag 102  Q
    ||||    
T  9687718 aaag 9687715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 28 - 163
Target Start/End: Original strand, 31211194 - 31211332
Alignment:
Q  28 aaatttgtttaatttatgcttaaactcttaagttttttaacaatttt---gtagacgtgttaagaacattactaaaagttcctccgcaaaaaattatcgc 124  Q
    ||||||||||||||||| |||||| |||||||||||| |||||||||   |||||   |||||||||||||||||||||||||| ||| |||||||| ||    
T  31211194 aaatttgtttaatttatacttaaattcttaagtttttgaacaatttttttgtagattagttaagaacattactaaaagttcctctgcataaaattattgc 31211293  T
Q  125 aaaatttgatttatatgtccagattttattacttttatc 163  Q
    |||||||||||| || |||| ||||||||||||| ||||    
T  31211294 aaaatttgatttctacgtcccgattttattacttatatc 31211332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 4 - 163
Target Start/End: Original strand, 40158248 - 40158409
Alignment:
Q  4 tcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttt--gtagacgtgttaagaacattactaaaa 101  Q
    |||||||||||| || ||| ||| ||||||||||||||||||||||||||||| ||||||| |||||||||  | | |||||||||||||||||| ||||    
T  40158248 tcagtattagtcactcctcaatttaaatttgtttaatttatgcttaaactcttgagtttttgaacaatttttcgcatacgtgttaagaacattacaaaaa 40158347  T
Q  102 gttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    |||||||  ||||||| | |||||||||||||| | || ||||| | ||| ||| |||||||    
T  40158348 gttcctctacaaaaaaatttcgcaaaatttgatatctacgtccataatttgttaattttatc 40158409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 4462736 - 4462900
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaat--tttgtagacgtgttaagaacattacta 98  Q
    ||||||||||||||| || ||| |||||||||||||| |||||||||| ||||||| ||||||| ||||||  |||| ||||||||||||||||||| ||    
T  4462736 cactcagtattagtccctcctcaattcaaatttgtttcatttatgctttaactcttgagtttttgaacaattatttgcagacgtgttaagaacattatta 4462835  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    | ||| ||||  ||||||||| | |||||||||||||| ||  ||| |||||| ||| |||||||    
T  4462836 atagtccctctacaaaaaattgttgcaaaatttgatttctacatcctgattttgttaattttatc 4462900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 4 - 84
Target Start/End: Original strand, 8217493 - 8217575
Alignment:
Q  4 tcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaatt--ttgtagacgtgt 84  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  8217493 tcagtattagtctctgctcaattcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttcttgtagacgtgt 8217575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 30394060 - 30394212
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgt--agacgtgttaagaacattacta 98  Q
    |||||| ||||||||  | ||| || |||||||||||||||||||||||||||||||||||||| ||||||||| |  ||||||||||||||| ||| ||    
T  30394060 cactcaatattagtccttactcaatccaaatttgtttaatttatgcttaaactcttaagtttttcaacaattttttacagacgtgttaagaacgttatta 30394159  T
Q  99 aaagttcctccgcaaaaaattatcgc-aaaatttgatttatatgtccagatttt 151  Q
    |||| ||||||| |||||| |||||| |||||||||||| || ||||| |||||    
T  30394160 aaaggtcctccg-aaaaaaatatcgcaaaaatttgatttctacgtccatatttt 30394212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 18261491 - 18261338
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgtaga--cgtgttaagaacattacta 98  Q
    |||||||||||| ||  | ||| |||||||||||||||||| ||||||||| |||||||||||  |||| | || || |  |||||||||||||||||||    
T  18261491 cactcagtattaatcctttctcaattcaaatttgtttaatt-atgcttaaattcttaagttttcaaacattcttttacaaacgtgttaagaacattacta 18261393  T
Q  99 aaagttcctccgc--aaaaaattatcgcaaaatttgatttatatgtccagatttt 151  Q
    |||||||||| ||  ||||||||||||||||||||||||| || |||||||||||    
T  18261392 aaagttcctctgcaaaaaaaattatcgcaaaatttgatttctacgtccagatttt 18261338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 41193291 - 41193127
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgt---agacgtgttaagaacattact 97  Q
    |||||| ||||||||||  ||| |||||||||||||||||||||||||||||| || | ||||| ||||| ||| |   || |||||||||||  || ||    
T  41193291 cactcaatattagtctcc-ctcaattcaaatttgtttaatttatgcttaaacttttgattttttgaacaacttttttacagccgtgttaagaatgttgct 41193193  T
Q  98 aaaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    ||||||||||| |||||||||||||||||||||||| || || ||||||||||  ||| |||||||    
T  41193192 aaaagttcctctgcaaaaaattatcgcaaaatttgaattctacgtccagatttagttaattttatc 41193127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 2005003 - 2005155
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgt--agacgtgttaagaacattacta 98  Q
    |||||| ||||||||  | ||| || |||||||||||||||||||||||||||||||||||||| ||||||||| |  ||||||||||||||| ||| |     
T  2005003 cactcaatattagtccttactcaatccaaatttgtttaatttatgcttaaactcttaagtttttcaacaattttttacagacgtgttaagaacgttattt 2005102  T
Q  99 aaagttcctccgcaaaaaattatcgc-aaaatttgatttatatgtccagatttt 151  Q
    |||| ||||||| |||||| |||||| |||||||||||| || ||||| |||||    
T  2005103 aaaggtcctccg-aaaaaaatatcgcaaaaatttgatttctacgtccatatttt 2005155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 17742313 - 17742469
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgt--agacgtgttaagaacattacta 98  Q
    ||||||||||||||| ||  || ||||||||||||||||||||        ||||| ||||||| ||| ||||| |  ||||||||||||||||||||||    
T  17742313 cactcagtattagtccctcttcaattcaaatttgtttaattta--------ctcttgagtttttaaacgattttttgcagacgtgttaagaacattacta 17742404  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    |||||||||| | |||| ||| |||||||||||||||| || ||||||||||| ||| |||||||    
T  17742405 aaagttcctctgtaaaatattgtcgcaaaatttgatttctacgtccagattttgttaattttatc 17742469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 30 - 151
Target Start/End: Complemental strand, 22167161 - 22167039
Alignment:
Q  30 atttgtttaatttatgcttaaactcttaagttttttaacaatttt--gtagacgtgttaagaacattactaaaagttcctccgcaaaaaattatcgcaaa 127  Q
    |||||||||||| ||| ||||||||||| | |||| |||||||||  |||||||| |||||||||||||||||||||| |||| ||||||||||  ||||    
T  22167161 atttgtttaatt-atgtttaaactcttatgcttttgaacaattttttgtagacgtattaagaacattactaaaagttcatccgtaaaaaattatttcaaa 22167063  T
Q  128 atttgatttatatgtccagatttt 151  Q
    ||||||||| |||||||| |||||    
T  22167062 atttgatttctatgtccatatttt 22167039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 38693751 - 38693678
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttt 74  Q
    |||||| ||||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||    
T  38693751 cactcaatattagtctctgctcaattcatatttgtttaatttatacttaaactcttaagttttttaacaatttt 38693678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 107 - 163
Target Start/End: Complemental strand, 38693673 - 38693617
Alignment:
Q  107 tccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38693673 tccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 38693617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 26865212 - 26865301
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaa--ttttgtagacgtgttaag 88  Q
    ||||||||||| |||  | ||| |||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| ||||||||    
T  26865212 cactcagtatttgtcattcctcaattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttttgtagatgtgttaag 26865301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 7 - 115
Target Start/End: Complemental strand, 6365522 - 6365413
Alignment:
Q  7 gtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttt-gtagacgtgttaagaacattactaaaagttc 105  Q
    |||||||||  | ||| |||||||||||||||||||||||||||||| |||||||||| |||| |||| | ||| | ||||||||||||| |||||||||    
T  6365522 gtattagtccatactcaattcaaatttgtttaatttatgcttaaactattaagtttttgaacatttttcgcagatgcgttaagaacattagtaaaagttc 6365423  T
Q  106 ctccgcaaaa 115  Q
    ||| ||||||    
T  6365422 ctctgcaaaa 6365413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 40 - 136
Target Start/End: Original strand, 36875874 - 36875973
Alignment:
Q  40 tttatgcttaaactcttaagttttttaacaattttgt---agacgtgttaagaacattactaaaagttcctccgcaaaaaattatcgcaaaatttgattt 136  Q
    |||||| |||||||||||||||||| ||||||||| |   ||| |||||||||||| ||||||||||||| || |||||||| ||| |||||||||||||    
T  36875874 tttatggttaaactcttaagtttttgaacaatttttttgcagatgtgttaagaacactactaaaagttccaccacaaaaaatcatctcaaaatttgattt 36875973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 28 - 151
Target Start/End: Complemental strand, 2263081 - 2262957
Alignment:
Q  28 aaatttgtttaatttatgcttaaactcttaagttttttaacaattttgtagac--gtgttaagaacattactaaaagttcctccgcaaaaaattatcgca 125  Q
    |||||||||||||| ||||||||||| ||||  |||| ||||||||| |  ||  |||||||||||||||| |||||||| || ||||||||||||| ||    
T  2263081 aaatttgtttaatt-atgcttaaacttttaaaattttgaacaattttttgcacaagtgttaagaacattacaaaaagttcatctgcaaaaaattatctca 2262983  T
Q  126 aaatttgatttatatgtccagatttt 151  Q
    |||||| ||||||  || ||||||||    
T  2262982 aaattttatttatgcgtacagatttt 2262957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 48 - 151
Target Start/End: Complemental strand, 14050001 - 14049897
Alignment:
Q  48 taaactcttaagttttttaacaatttt--gtagacgtgttaagaacattactaaaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtcca 145  Q
    ||||||||||||||||| |||||||||  | | || ||||||||||||||||||||||| |||| | |||||||||| ||||||||||||| || |||||    
T  14050001 taaactcttaagtttttgaacaatttttggaacacatgttaagaacattactaaaagtttctccac-aaaaattatctcaaaatttgatttctacgtcca 14049903  T
Q  146 gatttt 151  Q
     |||||    
T  14049902 tatttt 14049897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 28 - 162
Target Start/End: Original strand, 40272464 - 40272600
Alignment:
Q  28 aaatttgtttaatttatgcttaaactcttaagttttttaacaattttgtagac--gtgttaagaacattactaaaagttcctccgcaaaaaattatcgca 125  Q
    |||||||||||||| ||||||||||| ||||| |||| ||||||||| |  ||  |||||||||||||||| |||||||| ||  |||||||||||| ||    
T  40272464 aaatttgtttaatt-atgcttaaacttttaagattttgaacaattttttgcacaagtgttaagaacattacgaaaagttcatctacaaaaaattatctca 40272562  T
Q  126 aaatttgatttatatgtccag-attttattacttttat 162  Q
    |||||| |||| |  |||||| ||||| ||||||||||    
T  40272563 aaattttatttctgcgtccagaattttgttacttttat 40272600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 28 - 151
Target Start/End: Complemental strand, 43210914 - 43210790
Alignment:
Q  28 aaatttgtttaatttatgcttaaactcttaagttttttaacaatttt--gtagacgtgttaagaacattactaaaagttcctccgcaaaaaattatcgca 125  Q
    |||||||||||||| ||||||||||| ||||| |||| |||||||||  ||| | |||||||||||||||  |||||||| |  ||||||||||||| ||    
T  43210914 aaatttgtttaatt-atgcttaaacttttaagattttgaacaattttttgtacaagtgttaagaacattaagaaaagttcttatgcaaaaaattatctca 43210816  T
Q  126 aaatttgatttatatgtccagatttt 151  Q
    |||||| |||| |  |||||||||||    
T  43210815 aaattttatttcttcgtccagatttt 43210790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 28 - 141
Target Start/End: Complemental strand, 3548633 - 3548519
Alignment:
Q  28 aaatttgtttaatttatgcttaaactcttaagttttttaacaat--tttgtagacgtgttaagaacattactaaaagttcctccgcaaaaaattatcgca 125  Q
    |||||||||||||| ||||||||||| |||| ||||| ||||||  |||||||| |||| |||||||||| ||||| ||||||  ||| |||||||| ||    
T  3548633 aaatttgtttaatt-atgcttaaacttttaactttttgaacaattatttgtagaagtgtcaagaacattattaaaaattcctcgacaagaaattatctca 3548535  T
Q  126 aaatttgatttatatg 141  Q
    |||||| |||| ||||    
T  3548534 aaatttaatttctatg 3548519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 4426002 - 4426153
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgt--agacgtgttaagaacattacta 98  Q
    ||||||||||||||| ||  || |||||| ||||||||||||||| |||||||  | ||||||| || |||||| |  | |||| |||||||||||||||    
T  4426002 cactcagtattagtccctcttcaattcaattttgtttaatttatgtttaaacttctgagtttttgaataattttttacatacgtcttaagaacattacta 4426101  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattt 150  Q
    |||||||||  ||  |||||| | ||||||||| |||| || ||| ||||||    
T  4426102 aaagttcctatgcgcaaaattgttgcaaaatttaatttttacgtctagattt 4426153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 42 - 151
Target Start/End: Original strand, 9924280 - 9924391
Alignment:
Q  42 tatgcttaaactcttaagttttttaacaattttgta--gacgtgttaagaacattactaaaagttcctccgcaaaaaattatcgcaaaatttgatttata 139  Q
    |||| |||||||||| ||||||| ||||||||| ||  ||| |||||||||||||||| |||||||||| |||||| ||| || |||||||||| || ||    
T  9924280 tatgtttaaactcttgagtttttgaacaattttttacagacttgttaagaacattacttaaagttcctctgcaaaatattgtcacaaaatttgaattcta 9924379  T
Q  140 tgtccagatttt 151  Q
     ||| |||||||    
T  9924380 cgtctagatttt 9924391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 151
Target Start/End: Original strand, 19332468 - 19332592
Alignment:
Q  28 aaatttgtttaatttatgcttaaactcttaagttttttaacaatttt--gtagacgtgttaagaacattactaaaagttcctccgcaaaaaattatcgca 125  Q
    |||||||||||||| ||||||||||| ||||| |||| || ||||||  ||| | |||||||||||||||| |||||||| ||   ||||||||||| ||    
T  19332468 aaatttgtttaatt-atgcttaaacttttaagattttgaataattttttgtacaagtgttaagaacattacgaaaagttcatctcgaaaaaattatctca 19332566  T
Q  126 aaatttgatttatatgtccagatttt 151  Q
    |||||| |||| |  |||||||||||    
T  19332567 aaattttatttctgcgtccagatttt 19332592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 49 - 136
Target Start/End: Original strand, 37446433 - 37446522
Alignment:
Q  49 aaactcttaagttttttaacaattttgta--gacgtgttaagaacattactaaaagttcctccgcaaaaaattatcgcaaaatttgattt 136  Q
    |||||||||||||||| ||||||||| ||  ||| |||||||||| ||||||||||||||| ||||||   |||| ||||||||||||||    
T  37446433 aaactcttaagtttttgaacaattttttacagacatgttaagaacgttactaaaagttccttcgcaaagttttattgcaaaatttgattt 37446522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 9 - 60
Target Start/End: Original strand, 28381174 - 28381225
Alignment:
Q  9 attagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagt 60  Q
    |||||||||||||| ||||||||||||||||| |||| ||||||||||||||    
T  28381174 attagtctctgctcaattcaaatttgtttaatctatgtttaaactcttaagt 28381225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 89 - 163
Target Start/End: Original strand, 34009992 - 34010066
Alignment:
Q  89 aacattactaaaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    ||||||||||||||||||||  |||||||||  ||||||||||||||| || || |||||||| ||| |||||||    
T  34009992 aacattactaaaagttcctctccaaaaaattgacgcaaaatttgatttctacgttcagattttgttaattttatc 34010066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 155 - 193
Target Start/End: Original strand, 41139174 - 41139212
Alignment:
Q  155 acttttatcgttttcaaaaattcatatttaattcatttc 193  Q
    |||||||||||||||||||||||||||||||||||||||    
T  41139174 acttttatcgttttcaaaaattcatatttaattcatttc 41139212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 28456565 - 28456626
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttt 62  Q
    |||||||||||||||  | ||| |||||||||||||||||||||| |||||||||| |||||    
T  28456565 cactcagtattagtcattcctcaattcaaatttgtttaatttatgtttaaactcttgagttt 28456626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 4 - 52
Target Start/End: Original strand, 38691964 - 38692012
Alignment:
Q  4 tcagtattagtctctgctccattcaaatttgtttaatttatgcttaaac 52  Q
    |||||||||||| |||||| ||||||||||||| |||||||||||||||    
T  38691964 tcagtattagtccctgctcaattcaaatttgttcaatttatgcttaaac 38692012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 43440228 - 43440280
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaact 53  Q
    |||||| ||||||||||||||| ||||||||||||| |||||||| |||||||    
T  43440228 cactcactattagtctctgctcaattcaaatttgttcaatttatgtttaaact 43440280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 151
Target Start/End: Complemental strand, 30698970 - 30698845
Alignment:
Q  27 caaatttgtttaatttatgcttaaactcttaagttttttaacaat--tttgtagacgtgttaagaacattactaaaagttcctccgcaaaaaattatcgc 124  Q
    ||||||||||||||| ||||||||| |||| | ||||| ||||||  |||||| || | |||||||||||||  ||||| ||||  ||||| |||| | |    
T  30698970 caaatttgtttaatt-atgcttaaattcttgaatttttaaacaatcttttgtacacctattaagaacattacggaaagtccctctacaaaatattaactc 30698872  T
Q  125 aaaatttgatttatatgtccagatttt 151  Q
    |||||||||||| || || ||||||||    
T  30698871 aaaatttgatttctacgttcagatttt 30698845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 41139958 - 41139903
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactctt 56  Q
    ||||||||||||||| |||||| ||| ||||||||| |||||||| ||||||||||    
T  41139958 cactcagtattagtccctgctcaatttaaatttgttcaatttatgattaaactctt 41139903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 43538568 - 43538623
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactctt 56  Q
    |||||||||||||| ||| ||| |||||||||||||||||||||| | ||||||||    
T  43538568 cactcagtattagtttctactcaattcaaatttgtttaatttatgttaaaactctt 43538623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 82 - 136
Target Start/End: Complemental strand, 28616260 - 28616206
Alignment:
Q  82 tgttaagaacattactaaaagttcctccgcaaaaaattatcgcaaaatttgattt 136  Q
    ||||||||||||||||||||||| || | |||||||| ||| |||||||||||||    
T  28616260 tgttaagaacattactaaaagtttcttcacaaaaaatcatctcaaaatttgattt 28616206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 28 - 151
Target Start/End: Original strand, 43209900 - 43210024
Alignment:
Q  28 aaatttgtttaatttatgcttaaactcttaagttttttaacaattttgtagac--gtgttaagaacattactaaaagttcctccgcaaaaaattatcgca 125  Q
    |||| ||||||||| |||||| |||| ||||| |||| ||||||||| |  ||  || ||||||||||||| |||||||| |  ||||||||||||| ||    
T  43209900 aaatctgtttaatt-atgcttgaacttttaagattttgaacaattttttgcacaagtattaagaacattaccaaaagttcttatgcaaaaaattatctca 43209998  T
Q  126 aaatttgatttatatgtccagatttt 151  Q
    |||||| |||| |  |||||||||||    
T  43209999 aaattttatttcttcgtccagatttt 43210024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 28 - 163
Target Start/End: Original strand, 10674648 - 10674785
Alignment:
Q  28 aaatttgtttaatttatgcttaaactcttaagttttttaacaattttgtagac--gtgttaagaacattactaaaagttcctccgcaaaaaattatcgca 125  Q
    |||||||| ||||| ||||||||||| ||||| |||| ||||||||| || |   ||||||| ||||||||||||||||| |   |||||||| ||| ||    
T  10674648 aaatttgtataatt-atgcttaaacttttaagattttgaacaattttttacaaaagtgttaaaaacattactaaaagttcatatacaaaaaatcatctca 10674746  T
Q  126 aaatttgatttatatgtccaga-ttttattacttttatc 163  Q
    ||||||  ||| || ||||| | |||| |||||||||||    
T  10674747 aaattttgtttctacgtccatatttttgttacttttatc 10674785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 115
Target Start/End: Original strand, 42852767 - 42852832
Alignment:
Q  52 ctcttaagttttttaacaattttgt--agacgtgttaagaacattactaaaagttcctccgcaaaa 115  Q
    ||||||| ||||| ||||||||| |  | ||||||||||||| ||||||||||||| |||||||||    
T  42852767 ctcttaaatttttgaacaattttttgcatacgtgttaagaacgttactaaaagttcttccgcaaaa 42852832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 28 - 106
Target Start/End: Original strand, 37812678 - 37812757
Alignment:
Q  28 aaatttgtttaatttatgcttaaactcttaagttttttaacaa--ttttgtagacgtgttaagaacattactaaaagttcc 106  Q
    |||||||||||||| ||||||||||| ||||| |||| |||||  ||||| | | |||||||||||||||| |||| ||||    
T  37812678 aaatttgtttaatt-atgcttaaacttttaagattttgaacaattttttgcacaagtgttaagaacattacgaaaatttcc 37812757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 92
Target Start/End: Original strand, 27280189 - 27280252
Alignment:
Q  28 aaatttgtttaatttatgcttaaactcttaagttttttaacaattttgtagacgtgttaagaaca 92  Q
    ||||||| |||||| ||||||||||| |||||||||| |||||| || || | ||||||||||||    
T  27280189 aaatttgattaatt-atgcttaaactattaagtttttgaacaatcttttatatgtgttaagaaca 27280252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 64
Target Start/End: Original strand, 37446332 - 37446372
Alignment:
Q  24 attcaaatttgtttaatttatgcttaaactcttaagttttt 64  Q
    |||||||| ||||||||||||| || |||||||||||||||    
T  37446332 attcaaatatgtttaatttatgttttaactcttaagttttt 37446372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 162
Target Start/End: Original strand, 42852826 - 42852866
Alignment:
Q  122 cgcaaaatttgatttatatgtccagattttattacttttat 162  Q
    ||||||||||||||| || ||||||||||| ||||||||||    
T  42852826 cgcaaaatttgatttctacgtccagattttgttacttttat 42852866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 160; Significance: 2e-85; HSPs: 72)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 1 - 193
Target Start/End: Complemental strand, 36063738 - 36063542
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttt----gtagacgtgttaagaacattac 96  Q
    |||||||||||||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||||||||||    ||||||||||||||||||||||    
T  36063738 cactcagtattagtctctgctcaattcaaatttgtttaatttatgtttaaattcttaagttttttaacaattttttttgtagacgtgttaagaacattac 36063639  T
Q  97 taaaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatcgttttcaaaaattcatatttaattcatttc 193  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  36063638 taaaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatcgtttttaaaaattcatatttaattcgtttc 36063542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 24451462 - 24451626
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgt--agacgtgttaagaacattacta 98  Q
    |||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  24451462 cacttagtattagtctatgctcaattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgtgtagacgtgttaagaacattacta 24451561  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24451562 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 24451626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 138; E-Value: 2e-72
Query Start/End: Original strand, 5 - 163
Target Start/End: Original strand, 21135305 - 21135465
Alignment:
Q  5 cagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttt--gtagacgtgttaagaacattactaaaag 102  Q
    |||||||||| ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  21135305 cagtattagtttctgctcaattcaaatttgtttaatttatgtttaaactcttaagttttttaacaattttttgtagacgtgttaagaacattactaaaag 21135404  T
Q  103 ttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21135405 ttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 21135465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 135; E-Value: 1e-70
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 13323865 - 13323700
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaa--ttttgtagacgtgttaagaacattact- 97  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||     
T  13323865 cactcagtattagtctctgctcaattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttttgtagacgtgttaagaacattacta 13323766  T
Q  98 aaaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    |||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  13323765 aaaagttcctccacaaaaaattatcgcaaaatttgatttatatgttcagattttattacttttatc 13323700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 130; E-Value: 1e-67
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 35863019 - 35863183
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttt--gtagacgtgttaagaacattacta 98  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  35863019 cactcagtattagtctctgctcaattcaaatttatttaatttatgcttaaactcttaagttttttaacaattttttgtagacgtgttaagaacattacta 35863118  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    |||| | |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  35863119 aaagattctccgcaaaaaattgttgcaaaatttgatttatatgtccagattttattacttttatc 35863183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 126; E-Value: 3e-65
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 35369168 - 35369332
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttt--gtagacgtgttaagaacattacta 98  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||  ||||||||||||| ||||||||||    
T  35369168 cactcagtagtagtctctgctcaattcaaatttgtttaatttatgcttcaactcttaagttttttaacaattttttgtagacgtgttaacaacattacta 35369267  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||    
T  35369268 aaagttactccgcaaaaaattattgcaaaatttgatttatatgtccaaattttattacttttatc 35369332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 37707036 - 37706872
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttt--gtagacgtgttaagaacattacta 98  Q
    ||||||||||| |||||||||| ||| |||||||| ||||||||||||||||||||| ||||||||||||||||  |||||||| || ||||||||||||    
T  37707036 cactcagtattggtctctgctcgattaaaatttgtgtaatttatgcttaaactcttatgttttttaacaattttttgtagacgtattgagaacattacta 37706937  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||    
T  37706936 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgttcagattttatcacttttatc 37706872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 41281613 - 41281451
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttt-gtagacgtgttaagaacattactaa 99  Q
    |||||| |||||||||||| || ||| |||||||||||||||||| |||||||||||| ||||||||||||||| |||||||| ||||||||||||||||    
T  41281613 cactcaatattagtctctgttcaatttaaatttgtttaatttatgtttaaactcttaa-ttttttaacaatttttgtagacgtcttaagaacattactaa 41281515  T
Q  100 aagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  41281514 aagttcctcagcaaaaaattatcgcaaaatttgatttatatatccagatttcattacttttatc 41281451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 2 - 163
Target Start/End: Complemental strand, 18840230 - 18840067
Alignment:
Q  2 actcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttt--gtagacgtgttaagaacattactaa 99  Q
    |||||||||||||  |||||| ||||||||||||||||||||| |||||||||| |||||||| |||||||||  ||| | ||||||||||||||||||     
T  18840230 actcagtattagttcctgctcaattcaaatttgtttaatttatacttaaactctcaagtttttgaacaattttttgtacatgtgttaagaacattactag 18840131  T
Q  100 aagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  18840130 aagttcctctgcaaaaaattatcgcaaaatttgatttctatgtccagattttattacttttatc 18840067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 17842443 - 17842606
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaa--ttttgtagacgtgttaagaacattacta 98  Q
    |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| |||||  ||||||| || |||||| ||||||||||    
T  17842443 cactcagtattagtctctgctcaattcaaatttgtttaatttatacttaaactcttaagtttttcaacaattttttgtatacatgttaaaaacattacta 17842542  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
     |||| | || |||||||| ||||||||| |||||||| || |||||||||||||||||||||||    
T  17842543 gaagtacatcagcaaaaaa-tatcgcaaattttgatttctacgtccagattttattacttttatc 17842606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 2 - 163
Target Start/End: Original strand, 8784557 - 8784720
Alignment:
Q  2 actcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaa--ttttgtagacgtgttaagaacattactaa 99  Q
    |||||||| ||||| || ||| ||||||||||||||||||||||||||||||||| ||||||| |||||  |||||  ||||||||||||||||||||||    
T  8784557 actcagtactagtccctcctcaattcaaatttgtttaatttatgcttaaactcttgagtttttaaacaagtttttgctgacgtgttaagaacattactaa 8784656  T
Q  100 aagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    ||||| ||| |||||||||| |||||||||||||||| || || |||||||||||| |||||||    
T  8784657 aagtttctctgcaaaaaattgtcgcaaaatttgatttctacgttcagattttattaattttatc 8784720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 6413583 - 6413447
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaa--ttttgtagacgtgttaagaacattacta 98  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| ||||||| |||||  ||||| ||||||||||||||||| ||||    
T  6413583 cactcagtattagtctctcctcaattcaaatttgtttaatttatgcttaaactcttgagtttttgaacaattttttgcagacgtgttaagaacatcacta 6413484  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgatt 135  Q
    ||||||||||  ||||||||| |||||||||||||||    
T  6413483 aaagttcctcttcaaaaaattgtcgcaaaatttgatt 6413447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 9252625 - 9252789
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttt--gtagacgtgttaagaacattacta 98  Q
    |||||||| |||||| || ||| ||||||||||||||||||||||||||||||||| ||||||| |||||||||  | ||||||||||||||||||||||    
T  9252625 cactcagtgttagtccctcctcaattcaaatttgtttaatttatgcttaaactcttgagtttttgaacaatttttcgcagacgtgttaagaacattacta 9252724  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    |||||||||  ||||||||||  ||||||||||||||| ||  |||||||||| ||| |||||||    
T  9252725 aaagttcctttgcaaaaaattgccgcaaaatttgatttctacttccagattttgttaattttatc 9252789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 44265426 - 44265578
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgt--agacgtgttaagaacattacta 98  Q
    ||||||||||||||| || ||| ||| |||||||||||||||||| |||||||||| ||||||| ||||||||| |  ||||||||||||||||||||||    
T  44265426 cactcagtattagtccctcctcaatttaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttgcagacgtgttaagaacattacta 44265525  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagatttt 151  Q
    |||||||||| |||||||||| | |||||||||||||| || |||||||||||    
T  44265526 aaagttcctctgcaaaaaattgttgcaaaatttgatttctaagtccagatttt 44265578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 6590244 - 6590406
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgt--agacgtgttaagaacattacta 98  Q
    |||||| |||||||| || ||| ||||||||||||||||||||||||||||||||| ||||||| ||||||||| |  ||||||||||||||||||||||    
T  6590244 cactcactattagtc-ctcctcaattcaaatttgtttaatttatgcttaaactcttgagtttttgaacaattttttggagacgtgttaagaacattacta 6590342  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttat 162  Q
    |||||||||| |||||||||| |||||||||||||||| || |  |||||||| ||| ||||||    
T  6590343 aaagttcctctgcaaaaaattgtcgcaaaatttgatttctaggctcagattttgttaattttat 6590406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 25102275 - 25102112
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgta--gacgtgttaagaacattacta 98  Q
    ||||||||||||||| || ||| |||||||||||||||||||||| |||||||||  ||||||| ||||||||| ||  |||||||||||||||||||||    
T  25102275 cactcagtattagtccctcctcaattcaaatttgtttaatttatgtttaaactctcgagtttttgaacaattttttacagacgtgttaagaacattacta 25102176  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttat 162  Q
    |||||||||  |||||||||| || ||||||||||||| || ||||||||||| ||| ||||||    
T  25102175 aaagttcctatgcaaaaaattgtcacaaaatttgatttctacgtccagattttgttaattttat 25102112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 87; E-Value: 6e-42
Query Start/End: Original strand, 4 - 163
Target Start/End: Original strand, 37967516 - 37967677
Alignment:
Q  4 tcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttt--gtagacgtgttaagaacattactaaaa 101  Q
    |||||||||||| || ||| ||||||||||||||||||||||| ||||||||| || |||| |||||||||  | |||||||| ||||||||||||||||    
T  37967516 tcagtattagtccctcctcaattcaaatttgtttaatttatgcataaactcttgagcttttaaacaatttttcgcagacgtgtaaagaacattactaaaa 37967615  T
Q  102 gttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
     ||||||||||||||||| |||||||||||||||| || ||||| ||||| ||| |||||||    
T  37967616 cttcctccgcaaaaaattgtcgcaaaatttgatttctacgtccatattttgttaattttatc 37967677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 33322511 - 33322675
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgt--agacgtgttaagaacattacta 98  Q
    ||||||||||||||| || ||| ||||||||||||||||||||| ||||||||| | ||||||  ||||||||| |  ||||||||||| ||||||||||    
T  33322511 cactcagtattagtccctcctcaattcaaatttgtttaatttatacttaaactcatgagttttcaaacaattttttgcagacgtgttaaaaacattacta 33322610  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    |||||||||| |||||||||| |||||||||||||||| || ||| ||||||| ||| |||||||    
T  33322611 aaagttcctctgcaaaaaattgtcgcaaaatttgatttttacgtctagattttgttaattttatc 33322675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 4 - 163
Target Start/End: Complemental strand, 5250701 - 5250540
Alignment:
Q  4 tcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgta--gacgtgttaagaacattactaaaa 101  Q
    |||||||||||| || ||| |||||||||||||||||||||| |||||||||| ||||||| ||||||||| ||  ||||||||||||||||||||||||    
T  5250701 tcagtattagtccctcctcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttactgacgtgttaagaacattactaaaa 5250602  T
Q  102 gttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    ||||||  || ||||||| |||||||||||||||| || ||  ||||||| ||| |||||||    
T  5250601 gttcctatgccaaaaattgtcgcaaaatttgatttctacgtttagattttgttaattttatc 5250540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 8 - 163
Target Start/End: Original strand, 39336978 - 39337122
Alignment:
Q  8 tattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttt--gtagacgtgttaagaacattactaaaagttc 105  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||  || ||||||||||||||||||||||||||||    
T  39336978 tattagtctctgctcaattcaaatttgtttaatttattcttaaactcttaagttttttaacaattttttgttgacgtgttaagaacattactaaaagttc 39337077  T
Q  106 ctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    | |||||             |||||||||||||||||||| |||||||||||||||||    
T  39337078 cgccgca-------------aaatttgatttatatgtccatattttattacttttatc 39337122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 16472970 - 16473124
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttt--gtagacgtgttaagaacattacta 98  Q
    ||||||| |||||||| ||||| || ||||||||||||||||||||||||||      |||||||||| |||||  |||||||||||||||   ||| ||    
T  16472970 cactcagaattagtctatgctcaatacaaatttgtttaatttatgcttaaac------gttttttaaccattttttgtagacgtgttaaga---ttatta 16473060  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  16473061 aaagttcctctgcaaaaaattatcgcaaaatttgatttatatgtccagatttt-ttacttttatc 16473124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 16477541 - 16477695
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttt--gtagacgtgttaagaacattacta 98  Q
    ||||||| |||||||| ||||| || ||||||||||||||||||||||||||      |||||||||| |||||  |||||||||||||||   ||| ||    
T  16477541 cactcagaattagtctatgctcaatacaaatttgtttaatttatgcttaaac------gttttttaaccattttttgtagacgtgttaaga---ttatta 16477631  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  16477632 aaagttcctctgcaaaaaattatcgcaaaatttgatttatatgtccagatttt-ttacttttatc 16477695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 8 - 145
Target Start/End: Complemental strand, 43623100 - 43622961
Alignment:
Q  8 tattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttt--gtagacgtgttaagaacattactaaaagttc 105  Q
    ||||| ||||| ||| ||||||||||||||||||||||||||||||||| ||||||| |||||||||  | ||||||||||| |||||||||||||||||    
T  43623100 tattaatctctcctcaattcaaatttgtttaatttatgcttaaactcttgagtttttgaacaatttttcgcagacgtgttaaaaacattactaaaagttc 43623001  T
Q  106 ctccgcaaaaaattatcgcaaaatttgatttatatgtcca 145  Q
    |||  ||||||||| |||||||||||||||| || |||||    
T  43623000 ctcttcaaaaaattgtcgcaaaatttgatttctacgtcca 43622961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 6018017 - 6018181
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgt--agacgtgttaagaacattacta 98  Q
    ||||||||||||||| ||  || ||||||||||||||||||||||| ||||||||| ||||||| |||| |||| |  |||| |||||| ||||||||||    
T  6018017 cactcagtattagtccctcttcaattcaaatttgtttaatttatgcataaactcttgagtttttgaacagttttttgcagacatgttaaaaacattacta 6018116  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    |||||||||| |||||||||| ||||||||||| |||| || || |||||||| ||| |||||||    
T  6018117 aaagttcctctgcaaaaaattgtcgcaaaatttaatttttacgttcagattttgttagttttatc 6018181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 27875760 - 27875608
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgtaga--cgtgttaagaacattacta 98  Q
    |||||||||||||||  | ||| ||||||||||||||| ||||||||||||||||| || |||| ||||||||| || |  |||||||| ||||||||||    
T  27875760 cactcagtattagtccatcctcaattcaaatttgtttattttatgcttaaactcttgagcttttgaacaattttttacaaacgtgttaaaaacattacta 27875661  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagatttt 151  Q
    |||||||||| |||||||||| ||| |||||||||||| || |||||||||||    
T  27875660 aaagttcctctgcaaaaaattgtcgtaaaatttgatttctacgtccagatttt 27875608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 28015941 - 28015789
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgtaga--cgtgttaagaacattacta 98  Q
    |||||||||||||||  | ||| ||||||||||||||| ||||||||||||||||| || |||| ||||||||| || |  |||||||| ||||||||||    
T  28015941 cactcagtattagtccatcctcaattcaaatttgtttattttatgcttaaactcttgagcttttgaacaattttttacaaacgtgttaaaaacattacta 28015842  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagatttt 151  Q
    |||||||||| |||||||||| ||| |||||||||||| || |||||||||||    
T  28015841 aaagttcctctgcaaaaaattgtcgtaaaatttgatttctacgtccagatttt 28015789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 38706756 - 38706592
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgt--agacgtgttaagaacattacta 98  Q
    ||||||||||||||| ||  || |||||||||||||||||||||| |||||||||| ||||||| ||||||||| |  ||||||||||||||| ||||||    
T  38706756 cactcagtattagtccctcatcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacgttacta 38706657  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    ||||| | |  |||||||||| |||||||||||||||| || ||||| ||||| ||| |||||||    
T  38706656 aaagtgcttgtgcaaaaaattgtcgcaaaatttgatttctacgtccaaattttgttaattttatc 38706592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 4 - 136
Target Start/End: Complemental strand, 41590648 - 41590514
Alignment:
Q  4 tcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttt--gtagacgtgttaagaacattactaaaa 101  Q
    |||||||||||| || ||| ||||||||||||||||||| ||||||||||||| || |||| |||||||||  | | |||||||||||||||||||||||    
T  41590648 tcagtattagtccctcctcaattcaaatttgtttaatttgtgcttaaactcttgagcttttgaacaatttttcgcatacgtgttaagaacattactaaaa 41590549  T
Q  102 gttcctccgcaaaaaattatcgcaaaatttgattt 136  Q
    |||||||  ||||||||| ||||||||||||||||    
T  41590548 gttcctctacaaaaaattgtcgcaaaatttgattt 41590514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 5696225 - 5696062
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaa--ttttgtagacgtgttaagaacattacta 98  Q
    |||| |||||||||| || ||| |||||||||||||||||||||| |||||||||| ||||||| |||||  ||||| ||||||||||||| ||||| |     
T  5696225 cactaagtattagtccctcctcaattcaaatttgtttaatttatgattaaactcttcagtttttgaacaattttttgcagacgtgttaagatcattattg 5696126  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    |||||||||| |||||||||| || ||||||||||||| || || |||||||| ||| |||||||    
T  5696125 aaagttcctctgcaaaaaattgtcacaaaatttgattttta-gttcagattttgttaattttatc 5696062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 17498807 - 17498643
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaa--ttttgtagacgtgttaagaacattacta 98  Q
    ||||| ||||||||| || ||| |||||||||||||||||||||||||||||| || ||||||| |||||  ||||| |||| | | ||||| |||||||    
T  17498807 cactctgtattagtccctcctcaattcaaatttgtttaatttatgcttaaacttttgagtttttgaacaattttttgcagacatataaagaaaattacta 17498708  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    |||||||||| |||||||||| |||||||||||||||| || || || ||||| ||| |||||||    
T  17498707 aaagttcctctgcaaaaaattgtcgcaaaatttgatttctacgttcaaattttgttaattttatc 17498643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 30658751 - 30658588
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgt--agacgtgttaagaacattacta 98  Q
    |||||||||||| ||||| ||| |||||||||||||||||| |||||||| ||||| ||||||| ||||||||| |  |||||| |||||||||||||||    
T  30658751 cactcagtattaatctctcctcaattcaaatttgtttaatt-atgcttaa-ctcttgagtttttaaacaattttttgcagacgtattaagaacattacta 30658654  T
Q  99 aaagttcctccgc-aaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    ||||||||||  | |||||| | | |||||||||||||| || ||||||||||| ||| |||||||    
T  30658653 aaagttcctcttcaaaaaaaatgttgcaaaatttgatttctacgtccagattttgttaattttatc 30658588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 14122058 - 14121950
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgt--agacgtgttaagaacattacta 98  Q
    |||||| |||||||| || ||| |||||||||||||||||||||| |||||||||| ||||||| ||||||||| |  ||||||||||||||||||||||    
T  14122058 cactcactattagtccctcctcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacattacta 14121959  T
Q  99 aaagttcct 107  Q
    |||||||||    
T  14121958 aaagttcct 14121950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 39 - 151
Target Start/End: Complemental strand, 17062639 - 17062526
Alignment:
Q  39 atttatgcttaaactcttaagttttttaacaattttgta--gacgtgttaagaacattactaaaagttcctccgcaaaaaattatcgcaaaatttgattt 136  Q
    ||||||||||||||| || ||||||| ||||||||||||  |||||||||||||||||| ||||||||| || ||||||| || ||||||||||||||||    
T  17062639 atttatgcttaaacttttgagtttttgaacaattttgtatagacgtgttaagaacattattaaaagttcttctgcaaaaa-ttgtcgcaaaatttgattt 17062541  T
Q  137 atatgtccagatttt 151  Q
     ||||||||||||||    
T  17062540 ctatgtccagatttt 17062526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 39 - 151
Target Start/End: Original strand, 17585719 - 17585832
Alignment:
Q  39 atttatgcttaaactcttaagttttttaacaattttgta--gacgtgttaagaacattactaaaagttcctccgcaaaaaattatcgcaaaatttgattt 136  Q
    ||||||||||||||| || ||||||| ||||||||||||  |||||||||||||||||| ||||||||| || ||||||| || ||||||||||||||||    
T  17585719 atttatgcttaaacttttgagtttttgaacaattttgtatagacgtgttaagaacattattaaaagttcttctgcaaaaa-ttgtcgcaaaatttgattt 17585817  T
Q  137 atatgtccagatttt 151  Q
     ||||||||||||||    
T  17585818 ctatgtccagatttt 17585832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 43988466 - 43988304
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgtagacgtgttaagaacattactaaa 100  Q
    ||||||||||||||| || ||| |||||||||||||||||| |||||||||||||||||||||  |||| | || |  | ||||| ||||| |||||||     
T  43988466 cactcagtattagtccctactcaattcaaatttgtttaatt-atgcttaaactcttaagttttcgaacattattttgcatgtgtttagaacgttactaat 43988368  T
Q  101 agttcctccgcaaaaaattatcgcaaaatttgatttatatgtccaga-ttttattacttttatc 163  Q
    || |||||| ||||| |||||||||||||||||||| ||  |||||| |||| |||||||||||    
T  43988367 agctcctccacaaaatattatcgcaaaatttgatttttacatccagatttttgttacttttatc 43988304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 24 - 163
Target Start/End: Complemental strand, 36471115 - 36470974
Alignment:
Q  24 attcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgt--agacgtgttaagaacattactaaaagttcctccgcaaaaaattat 121  Q
    |||||||||||||||||||||| |||||||||| ||||||| ||||||||| |  ||| || |||||||| |||| ||||||||||  | |||||||| |    
T  36471115 attcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagatgtattaagaacgttaccaaaagttcctatgtaaaaaattgt 36471016  T
Q  122 cgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    ||||||||||||||| || ||||| ||||| ||| |||||||    
T  36471015 cgcaaaatttgatttctacgtccaaattttgttaattttatc 36470974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 27 - 136
Target Start/End: Original strand, 36018115 - 36018227
Alignment:
Q  27 caaatttgtttaatttatgcttaaactcttaagttttttaacaa-ttttgtagacgtgttaagaacattactaaaagttcctccgcaaaaa-attatcgc 124  Q
    ||||||||||| |||||||||||||||||||||||||| ||||| |||| ||||||||||||||||  || |||||||| ||||||||||| ||||||||    
T  36018115 caaatttgtttcatttatgcttaaactcttaagtttttcaacaatttttttagacgtgttaagaacgctattaaaagtttctccgcaaaaacattatcgc 36018214  T
Q  125 -aaaatttgattt 136  Q
     ||||||||||||    
T  36018215 aaaaatttgattt 36018227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 5 - 136
Target Start/End: Complemental strand, 21160090 - 21159957
Alignment:
Q  5 cagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaa--ttttgtagacgtgttaagaacattactaaaag 102  Q
    ||||||||||| ||  || |||||||||||||||||||||||||| ||| || ||||||| |||||  ||||| | || |||||||||||| ||||||||    
T  21160090 cagtattagtccctcatcaattcaaatttgtttaatttatgcttatacttttgagtttttgaacaattttttgcaaacatgttaagaacatcactaaaag 21159991  T
Q  103 ttcctccgcaaaaaattatcgcaaaatttgattt 136  Q
    ||| |||||||||| || ||||| ||||||||||    
T  21159990 ttcatccgcaaaaagttgtcgcacaatttgattt 21159957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 27 - 136
Target Start/End: Complemental strand, 28755463 - 28755352
Alignment:
Q  27 caaatttgtttaatttatgcttaaactcttaagttttttaacaattttgt--agacgtgttaagaacattactaaaagttcctccgcaaaaaattatcgc 124  Q
    ||||||||||||||||||||||||| |||||||||||| ||||||||| |  ||||||||||||||| ||| |||||| ||||||| |||||| ||||||    
T  28755463 caaatttgtttaatttatgcttaaattcttaagtttttcaacaattttttacagacgtgttaagaacgttattaaaaggtcctccg-aaaaaaatatcgc 28755365  T
Q  125 -aaaatttgattt 136  Q
     ||||||||||||    
T  28755364 aaaaatttgattt 28755352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 39337833 - 39337760
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttt 74  Q
    |||| ||||||||||  ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39337833 cacttagtattagtccttgctcaattcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttt 39337760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 71 - 163
Target Start/End: Original strand, 2826931 - 2827023
Alignment:
Q  71 ttttgtagacgtgttaagaacattactaaaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    ||||| ||||||||||| ||||||||||||||||| ||| |||||||| ||||||||||||||||| ||| | |||||||| |||||||||||    
T  2826931 ttttgcagacgtgttaaaaacattactaaaagttcatccacaaaaaatcatcgcaaaatttgatttctatattcagattttgttacttttatc 2827023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 6 - 74
Target Start/End: Complemental strand, 35369999 - 35369931
Alignment:
Q  6 agtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttt 74  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  35369999 agtattaatctctgctcaattcaaatttgtttaatttatgcttaaactcttaagttttttaataatttt 35369931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 31 - 136
Target Start/End: Original strand, 30968670 - 30968778
Alignment:
Q  31 tttgtttaatttatgcttaaactcttaagttttttaacaatt---ttgtagacgtgttaagaacattactaaaagttcctccgcaaaaaattatcgcaaa 127  Q
    |||||||||||||||| ||||||||||||||||| |||||||   ||| | ||||||| | |||||||||||||||| |||  |||||||||||||||||    
T  30968670 tttgtttaatttatgcataaactcttaagtttttaaacaattattttgcatacgtgtttataacattactaaaagtttctctacaaaaaattatcgcaaa 30968769  T
Q  128 atttgattt 136  Q
    || ||||||    
T  30968770 atatgattt 30968778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 27 - 151
Target Start/End: Complemental strand, 5766006 - 5765878
Alignment:
Q  27 caaatttgtttaatttatgcttaaactcttaagttttttaacaattttgt----agacgtgttaagaacattactaaaagttcctccgcaaaaaattatc 122  Q
    ||||||||||||||||||||||||||||| |||||||| ||||||||| |    ||||||||||||||| ||| |||||| |||| || |||||| ||||    
T  5766006 caaatttgtttaatttatgcttaaactctgaagtttttcaacaattttttttacagacgtgttaagaacgttattaaaaggtccttcg-aaaaaaatatc 5765908  T
Q  123 gc-aaaatttgatttatatgtccagatttt 151  Q
    || |||||||||||| || ||||| |||||    
T  5765907 gcaaaaatttgatttctacgtccatatttt 5765878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 24 - 145
Target Start/End: Complemental strand, 42499670 - 42499547
Alignment:
Q  24 attcaaatttgtttaatttatgcttaaactcttaagttttttaacaa--ttttgtagacgtgttaagaacattactaaaagttcctccgcaaaaaattat 121  Q
    |||||| |||||||||||||||| |||||| |||||||||| |||||  ||||| |||||| ||||||||||||||||||| |  |  |||||||||| |    
T  42499670 attcaattttgtttaatttatgcataaactattaagtttttgaacaattttttgcagacgtattaagaacattactaaaagcttatatgcaaaaaattgt 42499571  T
Q  122 cgcaaaatttgatttatatgtcca 145  Q
    |||||||||| |||| || |||||    
T  42499570 cgcaaaatttaatttttacgtcca 42499547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 28 - 162
Target Start/End: Complemental strand, 32244685 - 32244549
Alignment:
Q  28 aaatttgtttaatttatgcttaaactcttaagttttttaacaattttgtagac--gtgttaagaacattactaaaagttcctccgcaaaaaattatcgca 125  Q
    |||||||||||||| ||||||||||| ||||| |||| ||||||||| |  ||  |||||||||||||||| |||||||| ||  |||||||||||| ||    
T  32244685 aaatttgtttaatt-atgcttaaacttttaagattttgaacaattttttgcacaagtgttaagaacattacgaaaagttcatctacaaaaaattatctca 32244587  T
Q  126 aaatttgatttatatgtccag-attttattacttttat 162  Q
    |||||| ||||||  |||||| ||||| ||||||||||    
T  32244586 aaattttatttatgcgtccagaattttgttacttttat 32244549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 84 - 151
Target Start/End: Complemental strand, 18304896 - 18304829
Alignment:
Q  84 ttaagaacattactaaaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagatttt 151  Q
    ||||||||||||||||||||||||| |||||||||| |||||||||||||||| || ||||| |||||    
T  18304896 ttaagaacattactaaaagttcctctgcaaaaaattgtcgcaaaatttgatttctacgtccaaatttt 18304829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 28 - 151
Target Start/End: Complemental strand, 44894698 - 44894574
Alignment:
Q  28 aaatttgtttaatttatgcttaaactcttaagttttttaacaattttgtagac--gtgttaagaacattactaaaagttcctccgcaaaaaattatcgca 125  Q
    |||||||||||||| ||||||||||| ||||| |||| ||||||||| |  ||  |||||||||||||||| |||||||| ||  |||||||||||| ||    
T  44894698 aaatttgtttaatt-atgcttaaacttttaagattttgaacaattttttgcacaagtgttaagaacattacgaaaagttcatctccaaaaaattatctca 44894600  T
Q  126 aaatttgatttatatgtccagatttt 151  Q
    |||||| |||| |  |||||||||||    
T  44894599 aaattttatttctgcgtccagatttt 44894574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 42 - 163
Target Start/End: Complemental strand, 32514318 - 32514194
Alignment:
Q  42 tatgcttaaactcttaagttttttaacaattttgta--gacgtgttaagaacattactaaaagttcctccgcaaaaaattatcgcaaaatttgatttata 139  Q
    |||||||||||| ||||| |||| ||||||||| ||  || ||||||||||||||||||| ||||| || |||||||||||||  ||||||| || | ||    
T  32514318 tatgcttaaacttttaagattttaaacaattttttacagaagtgttaagaacattactaatagttcatctgcaaaaaattatctgaaaattttatatcta 32514219  T
Q  140 tgtccag-attttattacttttatc 163  Q
     |||||| ||||| |||||||||||    
T  32514218 cgtccagaattttgttacttttatc 32514194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 41 - 190
Target Start/End: Original strand, 28694963 - 28695119
Alignment:
Q  41 ttatgcttaaactcttaagttttttaacaattttgtagacgtg--ttaagaacattactaaaagttcctccgc----aaaaaattatcgcaaaatttgat 134  Q
    |||||||||||||||  ||||||| ||||||||| |  |||||  |||||| ||||||||||||||||| | |    ||||||||| | ||||||||||     
T  28694963 ttatgcttaaactctagagtttttgaacaattttttgtacgtgtattaagagcattactaaaagttccttcacaaaaaaaaaattagctcaaaatttgac 28695062  T
Q  135 ttatatgtccagatttta-ttacttttatcgttttcaaaaattcatatttaattcat 190  Q
    || || ||||| |||||| |||||| ||||||||  |||||||| ||||||||||||    
T  28695063 ttctacgtccatattttagttacttatatcgtttaaaaaaattcttatttaattcat 28695119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 27 - 136
Target Start/End: Complemental strand, 2821271 - 2821168
Alignment:
Q  27 caaatttgtttaatttatgcttaaactcttaagttttttaacaattttgtagacgtgttaagaacattactaaaagttcctccgcaaaaaattatcgcaa 126  Q
    |||||||||||| |||||| ||||||| |||| ||||||     ||||||||| |||||||||| |||||||||| ||||||| ||||||||||   |||    
T  2821271 caaatttgttta-tttatgtttaaacttttaattttttt-----ttttgtagaagtgttaagaaaattactaaaaattcctccacaaaaaattagttcaa 2821178  T
Q  127 aatttgattt 136  Q
    ||||||||||    
T  2821177 aatttgattt 2821168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 32243657 - 32243788
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgtagac--gtgttaagaacattacta 98  Q
    |||||||| ||||||||||||  ||  |||||||||||||| ||||||||||| ||||| |||| ||||||||| |  ||  || |||||||||| || |    
T  32243657 cactcagttttagtctctgctaaatctaaatttgtttaatt-atgcttaaacttttaagattttgaacaattttttgcacaagtattaagaacatcacga 32243755  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaattt 131  Q
    ||||||  || ||||||||||||| ||||||||    
T  32243756 aaagtttatctgcaaaaaattatctcaaaattt 32243788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 21136258 - 21136206
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaact 53  Q
    ||||||||||||||| |||||| ||||||||||||| ||||||||||||||||    
T  21136258 cactcagtattagtccctgctcaattcaaatttgttcaatttatgcttaaact 21136206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 13323163 - 13323218
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactctt 56  Q
    |||| |||||||||| |||||| ||||||||||||| |||||||||||||||||||    
T  13323163 cacttagtattagtccctgctcaattcaaatttgttcaatttatgcttaaactctt 13323218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 37706115 - 37706170
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactctt 56  Q
    |||||||||||||| ||| ||| ||||||||||||| |||||||||||||||||||    
T  37706115 cactcagtattagtttctactcaattcaaatttgttcaatttatgcttaaactctt 37706170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 136
Target Start/End: Original strand, 6243479 - 6243587
Alignment:
Q  28 aaatttgtttaatttatgcttaaactcttaagttttttaacaa--ttttgtagacgtgttaagaacattactaaaagttcctccgcaaaaaattatcgca 125  Q
    |||||||||||||| ||||||||||| |||| ||||  |||||  ||||| | | ||||||  |||||||| |||||||| |||||||||||||||| ||    
T  6243479 aaatttgtttaatt-atgcttaaacttttaaattttg-aacaaatttttgcacaagtgttagtaacattacgaaaagttcatccgcaaaaaattatctca 6243576  T
Q  126 aaatttgattt 136  Q
    |||||| ||||    
T  6243577 aaatttaattt 6243587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 16478488 - 16478433
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactctt 56  Q
    ||||||||||| ||| |||||| ||| ||||||||| |||||||||||||||||||    
T  16478488 cactcagtattggtccctgctcaattgaaatttgttcaatttatgcttaaactctt 16478433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 24452416 - 24452361
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactctt 56  Q
    ||||||||||||||| || ||| ||||||||||||| ||||||||| |||||||||    
T  24452416 cactcagtattagtccctactcaattcaaatttgttcaatttatgcataaactctt 24452361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 35863977 - 35863922
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactctt 56  Q
    |||||||||| | || |||||| ||||||||||||| |||||||||||||||||||    
T  35863977 cactcagtatcaatccctgctcaattcaaatttgttcaatttatgcttaaactctt 35863922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 36062784 - 36062839
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactctt 56  Q
    |||| ||||||||||  ||||| ||||||||||||| |||||||||||||||||||    
T  36062784 cactaagtattagtccatgctcaattcaaatttgttcaatttatgcttaaactctt 36062839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 3866707 - 3866543
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaac-tcttaagttttttaacaattttgtagac--gtgttaagaacattact 97  Q
    |||||||| |||||| || ||  ||| |||||||||||||| |||||||||| | ||||  |||| ||||||||| |  ||  |||||||||| |||||     
T  3866707 cactcagttttagtccctactaaatttaaatttgtttaatt-atgcttaaaccttttaaaattttgaacaattttttgcacaagtgttaagaatattacg 3866609  T
Q  98 aaaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccag-attttattacttttat 162  Q
    |||||||| |  ||||||||||||| |||||||| |||| | ||| ||| ||||| ||||||||||    
T  3866608 aaaagttcatatgcaaaaaattatctcaaaattttatttctgtgttcagaattttgttacttttat 3866543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 155 - 193
Target Start/End: Original strand, 16473129 - 16473167
Alignment:
Q  155 acttttatcgttttcaaaaattcatatttaattcatttc 193  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  16473129 acttttatcgttttcaaaaattcatatttaattcgtttc 16473167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 155 - 193
Target Start/End: Original strand, 16477700 - 16477738
Alignment:
Q  155 acttttatcgttttcaaaaattcatatttaattcatttc 193  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  16477700 acttttatcgttttcaaaaattcatatttaattcgtttc 16477738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 155 - 193
Target Start/End: Original strand, 21135470 - 21135508
Alignment:
Q  155 acttttatcgttttcaaaaattcatatttaattcatttc 193  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  21135470 acttttatcgttttcaaaaattcatatttaattcgtttc 21135508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 155 - 193
Target Start/End: Original strand, 24451631 - 24451669
Alignment:
Q  155 acttttatcgttttcaaaaattcatatttaattcatttc 193  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  24451631 acttttatcgttttcaaaaattcatatttaattcgtttc 24451669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 155 - 193
Target Start/End: Original strand, 35369337 - 35369375
Alignment:
Q  155 acttttatcgttttcaaaaattcatatttaattcatttc 193  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  35369337 acttttatcgttttcaaaaattcatatttaattcgtttc 35369375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 31 - 117
Target Start/End: Original strand, 10409789 - 10409876
Alignment:
Q  31 tttgtttaatttatgcttaaactcttaagttttttaacaattt--tgtagacgtgttaagaacattactaaaagttcctccgcaaaaaa 117  Q
    ||||||||||| ||| ||||||| ||||| |||| ||||||||  ||  || ||||||||||||||||||||||||| || ||||||||    
T  10409789 tttgtttaatt-atgtttaaacttttaagattttgaacaatttcttgcggaagtgttaagaacattactaaaagttcatctgcaaaaaa 10409876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 136
Target Start/End: Original strand, 36909741 - 36909806
Alignment:
Q  71 ttttgtagacgtgttaagaacattactaaaagttcctccgcaaaaaattatcgcaaaatttgattt 136  Q
    ||||| ||| ||||||||||| ||| | |||||| |||||||||||||||||  ||||||||||||    
T  36909741 ttttgcagatgtgttaagaacgttatttaaagtttctccgcaaaaaattatcttaaaatttgattt 36909806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 41 - 101
Target Start/End: Complemental strand, 28701928 - 28701866
Alignment:
Q  41 ttatgcttaaactcttaagttttttaacaa--ttttgtagacgtgttaagaacattactaaaa 101  Q
    ||||||||||||| ||||| |||| |||||  ||||||||| |||||||||| ||||||||||    
T  28701928 ttatgcttaaacttttaagattttgaacaattttttgtagaagtgttaagaatattactaaaa 28701866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 151
Target Start/End: Original strand, 3865698 - 3865822
Alignment:
Q  28 aaatttgtttaatttatgcttaaactcttaagttttttaacaattttgtagac--gtgttaagaacattactaaaagttcctccgcaaaaaattatcgca 125  Q
    |||||||||||||| ||||||||||| ||||| |||| ||||||||| |  ||  || |||||||||| || |||||||  ||  |||||||||||| ||    
T  3865698 aaatttgtttaatt-atgcttaaacttttaagattttgaacaattttttgcacaagtattaagaacatcacgaaaagtttatctccaaaaaattatctca 3865796  T
Q  126 aaatttgatttatatgtccagatttt 151  Q
    |||||| |||  |  |||||||||||    
T  3865797 aaattttattcctgcgtccagatttt 3865822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 41255319 - 41255388
Alignment:
Q  5 cagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttt 74  Q
    |||||||||||  | ||| ||||||||||||||||||  || |||| ||||| ||||||| |||||||||    
T  41255319 cagtattagtccatactcaattcaaatttgtttaattagtgtttaatctcttgagtttttgaacaatttt 41255388  T

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Target: chr8; HSP #72
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 7 - 56
Target Start/End: Original strand, 41280472 - 41280521
Alignment:
Q  7 gtattagtctctgctccattcaaatttgtttaatttatgcttaaactctt 56  Q
    ||||||||| |||| | ||||||||||||| ||||||| |||||||||||    
T  41280472 gtattagtccctgcccaattcaaatttgttcaatttatacttaaactctt 41280521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 148; Significance: 3e-78; HSPs: 64)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 1 - 193
Target Start/End: Complemental strand, 44209797 - 44209603
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttt--gtagacgtgttaagaacattacta 98  Q
    |||||||||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||||||| ||||||  ||||||||||||||||||||||||    
T  44209797 cactcagtattagtctctactcaattcaaatttgtttaatttatgtttaaactcttaagttttttaataattttttgtagacgtgttaagaacattacta 44209698  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatcgttttcaaaaattcatatttaattcatttc 193  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||    
T  44209697 aaagttcgtacgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatccttttcaaaaatacatatttaattcttttc 44209603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 138; E-Value: 2e-72
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 10321675 - 10321839
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttt--gtagacgtgttaagaacattacta 98  Q
    |||||||||||||||||||||| ||| ||||||||||||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  10321675 cactcagtattagtctctgctcaattaaaatttgtttaatttatacttaaactcttaagttttttaacaattttttgtagacgtgttaagaacattacta 10321774  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10321775 aaagtccctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 10321839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 138; E-Value: 2e-72
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 33689608 - 33689444
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttt--gtagacgtgttaagaacattacta 98  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| ||||||||||||||||||    
T  33689608 cactcagtattagtctctgctcaattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttttgtagatgtgttaagaacattacta 33689509  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    ||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  33689508 aaaattcctccgcaaaaaattatcgcaaaatttggtttatatgtccagattttattacttttatc 33689444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 25422047 - 25422210
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttt--gtagacgtgttaagaacattacta 98  Q
    |||| ||||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||||||||||||||||||||    
T  25422047 cacttagtattagtctcttctcaattcaaatttgtttaatttatgtttaaactcttaagttttttaacatttttttgtagacgtgttaagaacattacta 25422146  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    |||| || ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  25422147 aaagatcatccgcaaaaaattatcgcaaaatttgatttatatgtccagatttt-ttacttttatc 25422210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 117; E-Value: 8e-60
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 35061140 - 35060978
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttt--gtagacgtgttaagaacattacta 98  Q
    |||||||||||||| ||||||| ||||||||||||||||||||| || ||||||||||| |||| |||||||||  ||||||||||||||||||||| ||    
T  35061140 cactcagtattagtatctgctcaattcaaatttgtttaatttattctaaaactcttaagatttt-aacaattttttgtagacgtgttaagaacattatta 35061042  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttat 162  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  35061041 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatatccagattttattacttttat 35060978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 31316520 - 31316684
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttt--gtagacgtgttaagaacattacta 98  Q
    ||||||||||||||||||| |   || ||||||||||||||||||||||||||||| |||||||||||||||||  ||||||||||||| ||||||||||    
T  31316520 cactcagtattagtctctgtttagtttaaatttgtttaatttatgcttaaactcttgagttttttaacaattttttgtagacgtgttaaaaacattacta 31316619  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  31316620 aaagttcctctgcaaaaaattatcgcaaaatttgatttatatgtccaaattttattatttttatc 31316684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 102; E-Value: 7e-51
Query Start/End: Original strand, 4 - 163
Target Start/End: Original strand, 37329471 - 37329633
Alignment:
Q  4 tcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttt--gtagacgtgttaagaacattactaaaa 101  Q
    |||||||||||| ||| || |||||||||||||||||||||| |||||||||||| |||||||||||||||  |||||||||||||||||||||||||||    
T  37329471 tcagtattagtc-ctgttcaattcaaatttgtttaatttatgtttaaactcttaaattttttaacaattttttgtagacgtgttaagaacattactaaaa 37329569  T
Q  102 gttcctccgcaaaaaattatcgcaaaatttgatt--tatatgtccagattttattacttttatc 163  Q
    |||| ||||||||||||||| ||||||||| |||  ||||| ||||||||||||||||||||||    
T  37329570 gttcatccgcaaaaaattattgcaaaatttaatttatatatatccagattttattacttttatc 37329633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 102; E-Value: 7e-51
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 38114527 - 38114363
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgta--gacgtgttaagaacattacta 98  Q
    ||||||||||||||| || ||| |||||||||||||||||||||| |||||||||| ||||||||||||| ||| ||  |||||||||||||||||||||    
T  38114527 cactcagtattagtccctcctcaattcaaatttgtttaatttatgtttaaactcttgagttttttaacaaatttttacagacgtgttaagaacattacta 38114428  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    |||||||||  |||||||||| || |||||||||||||||||||||||||||| ||| |||||||    
T  38114427 aaagttcctatgcaaaaaattgtcacaaaatttgatttatatgtccagattttgttaattttatc 38114363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 4 - 163
Target Start/End: Complemental strand, 23473790 - 23473628
Alignment:
Q  4 tcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttt---gtagacgtgttaagaacattactaaa 100  Q
    ||||||||||||| ||||| || ||||||||||||||||||||||||| |||||||||||| || ||||||   |||||||||| |||||| |||| |||    
T  23473790 tcagtattagtctatgctcaatgcaaatttgtttaatttatgcttaaagtcttaagtttttgaataatttttttgtagacgtgtcaagaacgttaccaaa 23473691  T
Q  101 agttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    |||||||| ||||||||||||||||||||||||||  ||||||||||||||||||||| ||||    
T  23473690 agttcctctgcaaaaaattatcgcaaaatttgattcttatgtccagattttattacttatatc 23473628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 28 - 163
Target Start/End: Original strand, 51876014 - 51876151
Alignment:
Q  28 aaatttgtttaatttatgcttaaactcttaagttttttaacaattttgtaga--cgtgttaagaacattactaaaagttcctccgcaaaaaattatcgca 125  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||| ||||  ||||||||||||||||||||||||||||| ||||||||||||| ||    
T  51876014 aaatttgtttaatttatgcttaaactcttgagtttttgaacaattttttagagacgtgttaagaacattactaaaagttcctctgcaaaaaattatcaca 51876113  T
Q  126 aaatttgatttatatgtccagattttattacttttatc 163  Q
    |||||||||||||| ||||||||||| ||| |||||||    
T  51876114 aaatttgatttatacgtccagattttgttaattttatc 51876151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 30331593 - 30331429
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgtaga--cgtgttaagaacattacta 98  Q
    ||||||||||||||| || ||| |||||||||||||||||||||| |||||||||| ||||||| ||||||||| || |  |||||||||||||||||||    
T  30331593 cactcagtattagtccctcctcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacaggcgtgttaagaacattacta 30331494  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    |||||||||  |||||||||| |||||||||||||||| || ||||||||||| ||| |||||||    
T  30331493 aaagttcctatgcaaaaaattgtcgcaaaatttgatttctacgtccagattttgttaattttatc 30331429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 53323754 - 53323919
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgt---agacgtgttaagaacattact 97  Q
    ||||||||||||||| || ||| |||||||||||||||||||||| |||||||||| ||||||| ||||||||| |   | |||||||||||||||||||    
T  53323754 cactcagtattagtccctcctcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaatttttttacatacgtgttaagaacattact 53323853  T
Q  98 aaaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    ||||||||||  |||||||||| || ||||||||||||| || ||||||||||| ||| |||||||    
T  53323854 aaaagttcctatgcaaaaaattgtcacaaaatttgatttctacgtccagattttgttaattttatc 53323919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 19522692 - 19522855
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgta--gacgtgttaagaacattacta 98  Q
    |||||| |||||||| || ||| |||||||||||||||||||||| |||||||||| ||||||| ||||||||| ||  |||||||||||||||||||||    
T  19522692 cactcactattagtccctcctcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacattacta 19522791  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttat 162  Q
    |||  ||||  |||||||||| |||||||||||||||| || ||||||||||| ||| ||||||    
T  19522792 aaaagtcctatgcaaaaaattgtcgcaaaatttgatttctacgtccagattttgttaattttat 19522855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 24 - 160
Target Start/End: Original strand, 10085488 - 10085626
Alignment:
Q  24 attcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgt--agacgtgttaagaacattactaaaagttcctccgcaaaaaattat 121  Q
    |||||||||||||||||||||||| |||||||||||||| | || |||||| |  |||| |||| |||||||||||||||||||||||||||||||||||    
T  10085488 attcaaatttgtttaatttatgctaaaactcttaagtttgtgaataattttttgcagacatgtttagaacattactaaaagttcctccgcaaaaaattat 10085587  T
Q  122 cgcaaaatttgatttatatgtccagattttattactttt 160  Q
    ||||||||||||||| ||| ||| |||||| ||||||||    
T  10085588 cgcaaaatttgatttctatatcctgattttgttactttt 10085626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 5 - 163
Target Start/End: Complemental strand, 13718287 - 13718126
Alignment:
Q  5 cagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgt---agacgtgttaagaacattactaaaa 101  Q
    |||||||||||  | ||| ||| ||||||||||||||||||||||||||||| ||||||||||||||||| |   |||| ||||||||| ||||||||||    
T  13718287 cagtattagtccttcctcaatttaaatttgtttaatttatgcttaaactcttgagttttttaacaatttttttccagacatgttaagaatattactaaaa 13718188  T
Q  102 gttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    ||||||| |||||||||| |||||||||||||||| || |||| |||||| ||| |||||||    
T  13718187 gttcctctgcaaaaaattgtcgcaaaatttgatttctacgtcctgattttgttaattttatc 13718126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 8 - 115
Target Start/End: Complemental strand, 53571837 - 53571728
Alignment:
Q  8 tattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaa--ttttgtagacgtgttaagaacattactaaaagttc 105  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||  ||||||||||||||||||||||||| |||||||||    
T  53571837 tattagtctctgctcaattcaaatttgtttaatttattcttaaactcttaagttttttaacaattttttgtagacgtgttaagaacattattaaaagttc 53571738  T
Q  106 ctccgcaaaa 115  Q
    | ||||||||    
T  53571737 cgccgcaaaa 53571728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 20178190 - 20178026
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgtaga--cgtgttaagaacattacta 98  Q
    |||||||||||| ||  | ||| |||||||||||||||||||||||||||| ||||  ||| || ||||||||| || |  | |||||||||||||||||    
T  20178190 cactcagtattaatccatcctcaattcaaatttgtttaatttatgcttaaattcttgggttattgaacaattttttacatacatgttaagaacattacta 20178091  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    ||||||||||  ||||||||| ||||||||||||||||||| ||||||||||| |||||||||||    
T  20178090 aaagttcctctacaaaaaattgtcgcaaaatttgatttatacgtccagattttgttacttttatc 20178026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 33177736 - 33177572
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgta--gacgtgttaagaacattacta 98  Q
    |||||||||||| || || ||| ||| |||||||||||||||||| |||||||||| ||||||| ||||||||| ||  |||||||||||||||||||||    
T  33177736 cactcagtattattccctcctcaatttaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacattacta 33177637  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    |||| ||||  |||||||||| || ||||||||||||| || ||||||||||| ||| |||||||    
T  33177636 aaagctcctatgcaaaaaattgtctcaaaatttgatttctacgtccagattttgttaattttatc 33177572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 47309414 - 47309578
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaat--tttgtagacgtgttaagaacattacta 98  Q
    ||||||||||||||| || ||| |||||||||||||||||||||| |||||||||| ||||||| ||||||  |||  |||| |||||||||||||| ||    
T  47309414 cactcagtattagtccctcctcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattatttacagacatgttaagaacattaata 47309513  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    |||||||||  |||||||||| | ||||||||||||||||| ||| ||||||| ||| |||||||    
T  47309514 aaagttcctatgcaaaaaattgtagcaaaatttgatttatacgtcaagattttgttaattttatc 47309578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 24 - 160
Target Start/End: Original strand, 43938004 - 43938143
Alignment:
Q  24 attcaaatttgtttaatttatgcttaaactcttaagttttttaacaa--ttttgtagacgtgttaagaacattactaaaagttcctccgc-aaaaaatta 120  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||  |||||||||| ||||||||||||||||||||||||||| || ||||||||     
T  43938004 attcaaatttgtttaatttatgcttaaactcttgagtttttgaacaattttttgtagacatgttaagaacattactaaaagttcctctgcaaaaaaattg 43938103  T
Q  121 tcgcaaaatttgatttatatgtccagattttattactttt 160  Q
    ||||||||||| ||||||| || |||||||| ||| ||||    
T  43938104 tcgcaaaattttatttatacgttcagattttgttaatttt 43938143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 53423879 - 53423716
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgt--agacgtgttaagaacattacta 98  Q
    |||||||||||||||  | ||| ||||||||||||||||||||| || |||||||| |||||||  |||||||| |  |||| |||||||||||||||||    
T  53423879 cactcagtattagtccttactcaattcaaatttgtttaatttatact-aaactcttgagtttttggacaattttttgcagacatgttaagaacattacta 53423781  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    ||||||||||||||||||||| |||||||||||| || | | ||||| ||||| |||||||||||    
T  53423780 aaagttcctccgcaaaaaattgtcgcaaaatttgtttcacacgtccatattttgttacttttatc 53423716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 75; E-Value: 9e-35
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 4850074 - 4850211
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaa--ttttgtagacgtgttaagaacattacta 98  Q
    |||||| |||||||| ||  || |||||||| |||||||||||||||||||||||||||||||| |||||  ||||| | ||||||||||||  ||||||    
T  4850074 cactcaatattagtccctattcaattcaaatatgtttaatttatgcttaaactcttaagtttttgaacaattttttgcatacgtgttaagaatgttacta 4850173  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgattt 136  Q
    ||| || |||||||||||||||||||||||||||||||    
T  4850174 aaaatttctccgcaaaaaattatcgcaaaatttgattt 4850211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 6 - 163
Target Start/End: Complemental strand, 47379486 - 47379327
Alignment:
Q  6 agtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaa--ttttgtagacgtgttaagaacattactaaaagt 103  Q
    ||||||||||  | ||| |||||||||||||||||| ||||||| |||||||||||||  || |   ||||| |||||||||||||||| ||||||||||    
T  47379486 agtattagtcattactcaattcaaatttgtttaatt-atgcttatactcttaagttttcgaaaatgcttttgcagacgtgttaagaacaatactaaaagt 47379388  T
Q  104 tcctccgcaaaaaattatcgcaaaatttgatttatatgtccaga-ttttattacttttatc 163  Q
    ||||||||||||||||||||||||||||||||| || ||||| | |||| |||||||||||    
T  47379387 tcctccgcaaaaaattatcgcaaaatttgatttctacgtccatatttttgttacttttatc 47379327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 8 - 133
Target Start/End: Original strand, 22068084 - 22068211
Alignment:
Q  8 tattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgt--agacgtgttaagaacattactaaaagttc 105  Q
    |||||||| || ||| |||||||||||||||||||||| |||||||||| ||||||| || | |||| |  |||||||||||||||||||||||||||||    
T  22068084 tattagtccctcctcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaatagttttctgcagacgtgttaagaacattactaaaagttc 22068183  T
Q  106 ctccgcaaaaaattatcgcaaaatttga 133  Q
    ||| |||||||||| |||||||||||||    
T  22068184 ctctgcaaaaaattgtcgcaaaatttga 22068211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 28 - 163
Target Start/End: Original strand, 55938075 - 55938212
Alignment:
Q  28 aaatttgtttaatttatgcttaaactcttaagttttttaacaattttgt--agacgtgttaagaacattactaaaagttcctccgcaaaaaattatcgca 125  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||| |  |||||||||||||| |||||||||||| |||| |  ||||||| |||||    
T  55938075 aaatttgtttaatttatgcttaaactcttgagtttttgaacaattttttgcagacgtgttaagaatattactaaaagtacctctgtgaaaaattgtcgca 55938174  T
Q  126 aaatttgatttatatgtccagattttattacttttatc 163  Q
    ||||||||||| || || |||||||| ||| |||||||    
T  55938175 aaatttgatttctacgtgcagattttgttaattttatc 55938212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 24 - 136
Target Start/End: Complemental strand, 28448676 - 28448563
Alignment:
Q  24 attcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgt-agacgtgttaagaacattactaaaagttcctccgcaaaaaattatc 122  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||||||||| |   ||||||| |||||||||||||||||||||  |||||||||| ||    
T  28448676 attcaaatttgtttaatttatgcttaaactcttgagtttttgaacaattttttgcaacgtgttgagaacattactaaaagttcctatgcaaaaaattgtc 28448577  T
Q  123 gcaaaatttgattt 136  Q
    ||||||||||||||    
T  28448576 gcaaaatttgattt 28448563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 8 - 163
Target Start/End: Original strand, 11670106 - 11670250
Alignment:
Q  8 tattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttt--gtagacgtgttaagaacattactaaaagttc 105  Q
    ||||||| ||||||| ||||||||||||||||||||| ||||||| |||||||||||||||||||||  ||||| |||||| |||||||| |||||||||    
T  11670106 tattagtatctgctcaattcaaatttgtttaatttattcttaaacgcttaagttttttaacaattttttgtagatgtgttaggaacattattaaaagttc 11670205  T
Q  106 ctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    | |||||             |||||||||||||||||||| |||||||||||||||||    
T  11670206 cgccgca-------------aaatttgatttatatgtccatattttattacttttatc 11670250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 11670949 - 11670860
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaa--ttttgtagacgtgttaag 88  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| ||||||||    
T  11670949 cactcagtattagtctttgctcaattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttttgtagatgtgttaag 11670860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 3873488 - 3873380
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgt--agacgtgttaagaacattacta 98  Q
    |||||||||||||||||| ||| |||||||||||||||||||||| |||||||||| ||||||| ||||||||| |  || | |||||||||||||||||    
T  3873488 cactcagtattagtctctcctcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacaggcatgttaagaacattacta 3873389  T
Q  99 aaagttcct 107  Q
    |||||||||    
T  3873388 aaagttcct 3873380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 44289657 - 44289809
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgt--agacgtgttaagaacattacta 98  Q
    |||||| ||||||||  | ||| || |||||||||||||||||||||||||||||||||||||| ||||||||| |  ||||||||||||||| ||| ||    
T  44289657 cactcaatattagtccttactcaatccaaatttgtttaatttatgcttaaactcttaagtttttcaacaattttttacagacgtgttaagaacgttatta 44289756  T
Q  99 aaagttcctccgcaaaaaattatcgc-aaaatttgatttatatgtccagatttt 151  Q
    |||| || |||| |||||| |||||| |||||||||||| || ||||| |||||    
T  44289757 aaaggtcatccg-aaaaaaatatcgcaaaaatttgatttctacgtccatatttt 44289809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 51395927 - 51395795
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaatt--ttgtagacgtgttaagaacattacta 98  Q
    ||||||||||||||| || ||| ||||||||||||||||||||||||||||||| | ||||||| || ||||  ||| |||||||||||  |||||||||    
T  51395927 cactcagtattagtccctcctcaattcaaatttgtttaatttatgcttaaactcatgagtttttgaataatttcttgcagacgtgttaaacacattacta 51395828  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaattt 131  Q
    |||||||||   ||||| ||| |||||||||||    
T  51395827 aaagttcctgtacaaaatattgtcgcaaaattt 51395795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 27 - 151
Target Start/End: Original strand, 48082449 - 48082575
Alignment:
Q  27 caaatttgtttaatttatgcttaaactcttaagttttttaacaattttgt--agacgtgttaagaacattactaaaagttcctccgcaaaaaattatcgc 124  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| |  ||||||||||||||| ||| |||||| || |||| |||||| ||||||    
T  48082449 caaatttgtttaatttatgcttaaactcttaagtttttcaacaattttttacagacgtgttaagaacgttattaaaaggtcatccg-aaaaaaatatcgc 48082547  T
Q  125 -aaaatttgatttatatgtccagatttt 151  Q
     |||||||||||| || ||||| |||||    
T  48082548 aaaaatttgatttctacgtccatatttt 48082575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 24 - 136
Target Start/End: Complemental strand, 48220178 - 48220065
Alignment:
Q  24 attcaaatttgtttaatttatgcttaaactcttaagttttttaacaat--tttgtagacgtgttaagaacattactaaaagttcctccgcaaaaaattat 121  Q
    |||||||||||||||||| ||||||||||||||| ||||||||||| |  |||| |||  |||||||||||||||||||| |||||||||||||||||||    
T  48220178 attcaaatttgtttaatt-atgcttaaactcttatgttttttaacattcttttgcagatatgttaagaacattactaaaaattcctccgcaaaaaattat 48220080  T
Q  122 cgcaaaatttgattt 136  Q
     | ||||||| ||||    
T  48220079 tgtaaaatttaattt 48220065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 26 - 136
Target Start/End: Complemental strand, 47939867 - 47939756
Alignment:
Q  26 tcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttt--gtagacgtgttaagaacattactaaaagttcctccgcaaaaaattatcg 123  Q
    |||||||||||||||| ||||||||||| |||  ||||| | |||||||  |||||| |||||||||||||||||||||||  ||||||||||||||||     
T  47939867 tcaaatttgtttaatt-atgcttaaacttttagctttttaagcaattttttgtagacatgttaagaacattactaaaagtttttccgcaaaaaattatct 47939769  T
Q  124 caaaatttgattt 136  Q
    |||||||||||||    
T  47939768 caaaatttgattt 47939756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 71 - 163
Target Start/End: Original strand, 1870158 - 1870250
Alignment:
Q  71 ttttgtagacgtgttaagaacattactaaaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    |||||||||| |||||| |||||||||||||||| ||| |||||||||| || |||||||||||||||| ||||| ||||| |||||||||||    
T  1870158 ttttgtagacatgttaaaaacattactaaaagtttctcggcaaaaaattgtcacaaaatttgatttatacgtccatattttgttacttttatc 1870250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 4 - 117
Target Start/End: Original strand, 35821107 - 35821221
Alignment:
Q  4 tcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgt--agacgtgttaagaacattactaaaa 101  Q
    ||||| |||||| || |||  |||||||||||||||||||| ||||||||||||| ||||  ||||||||| |  |||||||||||||||||||||||||    
T  35821107 tcagttttagtccctcctcagttcaaatttgtttaatttatacttaaactcttaaattttg-aacaattttttgcagacgtgttaagaacattactaaaa 35821205  T
Q  102 gttcctccgcaaaaaa 117  Q
    ||||||| ||||||||    
T  35821206 gttcctctgcaaaaaa 35821221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 71 - 163
Target Start/End: Original strand, 38499339 - 38499431
Alignment:
Q  71 ttttgtagacgtgttaagaacattactaaaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    ||||| ||| ||||||||||||||||||||||||| || ||||||||| ||| |||||||| |||| |||||||||||||| |||||||||||    
T  38499339 ttttgcagaagtgttaagaacattactaaaagttcatctgcaaaaaataatctcaaaattttatttctatgtccagatttttttacttttatc 38499431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 24 - 151
Target Start/End: Original strand, 13603786 - 13603913
Alignment:
Q  24 attcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgt--agacgtgttaagaacattactaaaagttcctccgcaaaaaattat 121  Q
    |||||||||||||||||| |||||||||||||||||||||  ||||||||| |  |||  | ||| ||||||||||||||||||||||||||||| ||||    
T  13603786 attcaaatttgtttaatt-atgcttaaactcttaagttttg-aacaattttttgcagatattttatgaacattactaaaagttcctccgcaaaaatttat 13603883  T
Q  122 cgcaaaatttgatttatatgtccagatttt 151  Q
    | |||||| |||||| ||| |||| |||||    
T  13603884 ctcaaaatgtgatttttatatccaaatttt 13603913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 53569135 - 53569209
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaag-ttttttaacaatttt 74  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  53569135 cactcagtattagtctttgctcaattcaaatttgtttaatttatgcttaaactgttaagtttttttaacaatttt 53569209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 7617631 - 7617535
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgt--agacgtgttaagaacatta 95  Q
    ||||||||||||||| ||  || |||||||||||||||||||||| |||||||||| ||||||| ||||||||| |  |||| ||||||||||||||    
T  7617631 cactcagtattagtcactcttcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacatgttaagaacatta 7617535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 25243917 - 25243862
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactctt 56  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  25243917 cactcagtattagtctctgctcaattcaaatttgttcaatttatgcttaaactctt 25243862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 8 - 74
Target Start/End: Original strand, 31470949 - 31471015
Alignment:
Q  8 tattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttt 74  Q
    |||||||| |||||| |||||||||||||||||||||  |||||||| |||||||||||||||||||    
T  31470949 tattagtccctgctcaattcaaatttgtttaatttatttttaaactcgtaagttttttaacaatttt 31471015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 8 - 88
Target Start/End: Original strand, 53570995 - 53571078
Alignment:
Q  8 tattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaag-ttttttaacaa--ttttgtagacgtgttaag 88  Q
    ||||||||  ||||| |||||||||||||||||||||||||||||| ||||| |||||||||||  ||||||||| ||||||||    
T  53570995 tattagtccttgctcaattcaaatttgtttaatttatgcttaaactgttaagtttttttaacaattttttgtagatgtgttaag 53571078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 92 - 163
Target Start/End: Original strand, 47463437 - 47463508
Alignment:
Q  92 attactaaaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||| || ||||| ||||| ||| |||||||    
T  47463437 attactaaaagttcctctgcaaaaaattatcacaaaatttgatttctacgtccatattttgttaattttatc 47463508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 151
Target Start/End: Complemental strand, 34513305 - 34513181
Alignment:
Q  28 aaatttgtttaatttatgcttaaactcttaagttttttaacaattttgtagac--gtgttaagaacattactaaaagttcctccgcaaaaaattatcgca 125  Q
    |||||||||||||| ||||||||||| ||||| |||| ||||||||| |  ||  |||| ||||||||||| |||||||| ||  |||||||||||| ||    
T  34513305 aaatttgtttaatt-atgcttaaacttttaagattttgaacaattttttgcacaagtgtcaagaacattacgaaaagttcatctccaaaaaattatctca 34513207  T
Q  126 aaatttgatttatatgtccagatttt 151  Q
    |||||| |||| |  |||||||||||    
T  34513206 aaattttatttctgcgtccagatttt 34513181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 163
Target Start/End: Complemental strand, 42972976 - 42972885
Alignment:
Q  71 ttttgtagacgtgttaagaacattactaaaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    ||||| |||||||||||||||||| ||||| ||||| | |||||||||| ||| |||||||||||| || ||||| ||||| ||| |||||||    
T  42972976 ttttgcagacgtgttaagaacattgctaaa-gttccactgcaaaaaattgtcgtaaaatttgatttctacgtccaaattttgttaattttatc 42972885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 28 - 136
Target Start/End: Complemental strand, 6818087 - 6817979
Alignment:
Q  28 aaatttgtttaatttatgcttaaactcttaagttttttaacaatttt--gtagacgtgttaagaacattactaaaagttcctccgcaaaaaattatcgca 125  Q
    |||||||||||||| ||| |||||||||||  ||||| |||||||||  ||| |||| |||||||||| | | |||||||||||||||||||||  | ||    
T  6818087 aaatttgtttaatt-atgtttaaactcttacatttttgaacaattttttgtatacgttttaagaacataaattaaagttcctccgcaaaaaatt-gctca 6817990  T
Q  126 aaatttgattt 136  Q
    |||||||||||    
T  6817989 aaatttgattt 6817979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 31317871 - 31317816
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactctt 56  Q
    |||| |||||||||| |||||| ||||||||||||| |||||||||||||||||||    
T  31317871 cacttagtattagtccctgctcaattcaaatttgttcaatttatgcttaaactctt 31317816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 27 - 151
Target Start/End: Original strand, 55283114 - 55283239
Alignment:
Q  27 caaatttgtttaatttatgcttaaactcttaagttttttaacaat--tttgtagacgtgttaagaacattactaaaagttcctccgcaaaaaattatcgc 124  Q
    ||||||||||||||| ||||||||| |||| | ||||| ||||||  |||||| || | ||||||||||||| |||||| ||||  ||||| |||| | |    
T  55283114 caaatttgtttaatt-atgcttaaattcttgaatttttaaacaatcttttgtacacctattaagaacattacgaaaagtccctctacaaaatattaactc 55283212  T
Q  125 aaaatttgatttatatgtccagatttt 151  Q
    |||||||||||| || || ||||||||    
T  55283213 aaaatttgatttctacgttcagatttt 55283239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 94
Target Start/End: Complemental strand, 50824479 - 50824407
Alignment:
Q  24 attcaaatttgtttaatttatgcttaaactcttaagttttttaaca--attttgtagacgtgttaagaacatt 94  Q
    |||||||||||||||||||||||||||   ||||||||||| ||||  |||||  ||||||||||||||||||    
T  50824479 attcaaatttgtttaatttatgcttaatagcttaagtttttgaacaatatttttcagacgtgttaagaacatt 50824407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 25422999 - 25422944
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactctt 56  Q
    ||||||||| ||||| || ||| ||||||||||||| |||||||||||||||||||    
T  25422999 cactcagtactagtccctactcaattcaaatttgttcaatttatgcttaaactctt 25422944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 122
Target Start/End: Complemental strand, 28164010 - 28163916
Alignment:
Q  28 aaatttgtttaatttatgcttaaactcttaagttttttaacaattttgtagac-gtgttaagaacattactaaaagttcctccgcaaaaaattatc 122  Q
    |||||||||||||| ||||||||||| ||||  |||| ||||||||| |  || |||||||||||||||| |||||||| ||  ||||||||||||    
T  28164010 aaatttgtttaatt-atgcttaaacttttaaaattttgaacaattttttgcacagtgttaagaacattacgaaaagttcatctccaaaaaattatc 28163916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 35055104 - 35055159
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactctt 56  Q
    |||||| |||||||| ||| || ||||||||||||| |||||||||||||||||||    
T  35055104 cactcattattagtccctgttcaattcaaatttgttcaatttatgcttaaactctt 35055159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 77 - 163
Target Start/End: Original strand, 7490751 - 7490836
Alignment:
Q  77 agacgtgttaagaacattactaaaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    |||||||||||| |||||||||||| |||||| ||||||||||  |||| | |||||||| || ||||| ||||| ||| |||||||    
T  7490751 agacgtgttaagcacattactaaaa-ttcctctgcaaaaaattgacgcatattttgatttctacgtccaaattttgttaattttatc 7490836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 155 - 193
Target Start/End: Original strand, 10321844 - 10321882
Alignment:
Q  155 acttttatcgttttcaaaaattcatatttaattcatttc 193  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  10321844 acttttatcgttttcaaaaattcatatttaattcttttc 10321882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 155 - 193
Target Start/End: Original strand, 37329638 - 37329676
Alignment:
Q  155 acttttatcgttttcaaaaattcatatttaattcatttc 193  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  37329638 acttttatcgttttcaaaaattcatatttaattcgtttc 37329676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 10322632 - 10322579
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactc 54  Q
    ||||||||||||||| |||||| |||| |||||||| |||||||| ||||||||    
T  10322632 cactcagtattagtccctgctcaattctaatttgttcaatttatgattaaactc 10322579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 136
Target Start/End: Complemental strand, 35351954 - 35351844
Alignment:
Q  28 aaatttgtttaatttatgcttaaactcttaagttttttaacaatttt---gtagacgtgttaagaacattactaaaagttcctccgcaaaaaattatcgc 124  Q
    |||||||||||||| ||| |||||||| | ||||||| ||||| |||   || || ||||||| |||||||  |||||||| |||||||||||| ||| |    
T  35351954 aaatttgtttaatt-atgtttaaactcctgagtttttgaacaactttcttgtggaggtgttaaaaacattaacaaaagttcatccgcaaaaaatcatctc 35351856  T
Q  125 aaaatttgattt 136  Q
    | ||||||||||    
T  35351855 ataatttgattt 35351844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 44208855 - 44208910
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactctt 56  Q
    |||||| ||| |||| |||||| ||||||||||||| |||||||| ||||||||||    
T  44208855 cactcaatatcagtccctgctcaattcaaatttgttcaatttatgattaaactctt 44208910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 24 - 120
Target Start/End: Complemental strand, 52948053 - 52947956
Alignment:
Q  24 attcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgtagac--gtgttaagaacattactaaaagttcctccgcaaaaaatta 120  Q
    |||||||||||||||||| ||| |||||||||| | ||||| ||||||||| || |   ||||| | |||||||||||||||| |||| | ||||||||    
T  52948053 attcaaatttgtttaatt-atgtttaaactcttgaatttttgaacaattttttatatatgtgttcaaaacattactaaaagttgctccccgaaaaatta 52947956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 188
Target Start/End: Original strand, 25422218 - 25422248
Alignment:
Q  158 tttatcgttttcaaaaattcatatttaattc 188  Q
    |||||||||||||||||||||||||||||||    
T  25422218 tttatcgttttcaaaaattcatatttaattc 25422248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 187
Target Start/End: Original strand, 31316691 - 31316721
Alignment:
Q  157 ttttatcgttttcaaaaattcatatttaatt 187  Q
    |||||||||||||||||||||||||||||||    
T  31316691 ttttatcgttttcaaaaattcatatttaatt 31316721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 19523034 - 19522962
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttt 74  Q
    |||||| |||||| | || ||| |||||||||||||||| |||| ||||||||||||| ||||| ||| |||||    
T  19523034 cactcactattagcccctcctcaattcaaatttgtttaa-ttattcttaaactcttaaatttttgaacgatttt 19522962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 81 - 122
Target Start/End: Complemental strand, 44453039 - 44452998
Alignment:
Q  81 gtgttaagaacattactaaaagttcctccgcaaaaaattatc 122  Q
    |||||||||||||||| |||||||| || |||||||||||||    
T  44453039 gtgttaagaacattacgaaaagttcatctgcaaaaaattatc 44452998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 147; Significance: 1e-77; HSPs: 65)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 32942980 - 32943168
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttt--gtagacgtgttaagaacattacta 98  Q
    |||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  32942980 cacttagtattagtctctgctcaattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttttgtagacgtgttaagaacattacta 32943079  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatcgttttcaaaaattcatatttaattc 188  Q
    |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||| | | |||||||||||||||||||||||    
T  32943080 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtcttgattttattacttttgttg-tttcaaaaattcatatttaattc 32943168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 138; E-Value: 2e-72
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 32146976 - 32147140
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttt--gtagacgtgttaagaacattacta 98  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  32146976 cactcagtattagtctctgctcaattcaaatttgtctaatttatgcttaaactcttaagttttttaacaattttttgtagacgtgttaagaacattacta 32147075  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  32147076 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccatattttattactcttatc 32147140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 138; E-Value: 2e-72
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 53397075 - 53397239
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttt--gtagacgtgttaagaacattacta 98  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||  || |||||||||||||||||||||    
T  53397075 cactcagtattagtctctgctcaattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttttgtcgacgtgttaagaacattacta 53397174  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||    
T  53397175 aaagttcctccgcaaaaatttatcgcaaaatttgatttatatgtccagattttattacttctatc 53397239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 19669679 - 19669844
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactctt-aagttttttaacaatttt--gtagacgtgttaagaacattact 97  Q
    |||||||||||||||||||||| |||||||||||||||||||||| |||||||||| ||||||||||||||||||  |||||||||||||||||||||||    
T  19669679 cactcagtattagtctctgctcaattcaaatttgtttaatttatgtttaaactctttaagttttttaacaattttttgtagacgtgttaagaacattact 19669778  T
Q  98 aaaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    ||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  19669779 aaatgttcctccgcaaaaagttattgcaaaatttgatttatatgtccagattttattacttttatc 19669844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 126; E-Value: 3e-65
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 37178921 - 37179085
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgta--gacgtgttaagaacattacta 98  Q
    |||||| ||||||||||||||| |||||||||||||||||||||| |||||||||||| ||||||||||||||| ||  |||||||||||||||||||||    
T  37178921 cactcaatattagtctctgctcaattcaaatttgtttaatttatgtttaaactcttaaattttttaacaattttttatagacgtgttaagaacattacta 37179020  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  37179021 aaagttcatccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacatttatc 37179085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 45235661 - 45235496
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaa--ttttgtagacgtgttaagaacattacta 98  Q
    ||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||  |||| |||||||||||||||||||| ||    
T  45235661 cactcagtattagtcgctgctcaattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttttatagacgtgttaagaacattatta 45235562  T
Q  99 aaagttcctccgcaaaaaa-ttatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||||||||| ||||||| ||||    
T  45235561 aaagttcctccgcaaaaaatttatcgcaaaattttatttatatgtccagatttaattacttgtatc 45235496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 57 - 163
Target Start/End: Original strand, 45387448 - 45387556
Alignment:
Q  57 aagttttttaacaatttt--gtagacgtgttaagaacattactaaaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttatt 154  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  45387448 aagttttttaacaattttttgtagacgtgttaagaacattactaaaagttcctacgcaaaaaattatcgcaaaatttgatttatatgtccagattttatt 45387547  T
Q  155 acttttatc 163  Q
    |||||||||    
T  45387548 acttttatc 45387556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 45420098 - 45419937
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgt--agacgtgttaagaacattacta 98  Q
    ||||||||||||||| || ||| ||||||||||||||  ||||||||||||||||| ||||||| ||||||||| |  | ||||||||||||||||||||    
T  45420098 cactcagtattagtccctcctcaattcaaatttgttt--tttatgcttaaactcttgagtttttgaacaattttttgcatacgtgttaagaacattacta 45420001  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttat 162  Q
    |||||||||| |||||||||| |||||||||||||||| || ||||||||||| ||| ||||||    
T  45420000 aaagttcctctgcaaaaaattgtcgcaaaatttgatttctacgtccagattttgttaattttat 45419937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 53439304 - 53439420
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaa--ttttgtagacgtgttaagaacattacta 98  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||  |||| | |||||||||||||||||||||    
T  53439304 cactcagtattagtctctgctcaattcaaatttgtttaatttatgcttaaactcttacgttttttaacaattttttttcgacgtgttaagaacattacta 53439403  T
Q  99 aaagttcctccgcaaaa 115  Q
    |||||||||||||||||    
T  53439404 aaagttcctccgcaaaa 53439420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 87; E-Value: 6e-42
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 15772179 - 15772043
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttt--gtagacgtgttaagaacattacta 98  Q
    |||||||| |||||| || ||  |||||||||||||||||| ||||||||| |||||||||||| |||||||||  ||||||||||||||||||||||||    
T  15772179 cactcagttttagtccctcctaaattcaaatttgtttaatt-atgcttaaaatcttaagtttttaaacaattttttgtagacgtgttaagaacattacta 15772081  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgattt 136  Q
    |||||||||||||||||||||||| |||||||||||||    
T  15772080 aaagttcctccgcaaaaaattatctcaaaatttgattt 15772043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 4 - 147
Target Start/End: Complemental strand, 53518096 - 53517951
Alignment:
Q  4 tcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttt--gtagacgtgttaagaacattactaaaa 101  Q
    |||||||||||| || ||| |||||||||||||||||||||||||||||| || ||||||| |||||||||  | |||||||||||||||||||||||||    
T  53518096 tcagtattagtccctcctcaattcaaatttgtttaatttatgcttaaacttttgagtttttgaacaatttttcgcagacgtgttaagaacattactaaaa 53517997  T
Q  102 gttcctccgcaaaaaattatcgcaaaatttgatttatatgtccaga 147  Q
    |||| ||  ||||||||| |||||||||||||||| || |||||||    
T  53517996 gttcatctacaaaaaattgtcgcaaaatttgatttctacgtccaga 53517951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 21749546 - 21749710
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgta--gacgtgttaagaacattacta 98  Q
    |||||||||||||||||| ||| ||||||||||||||||||||| ||||||||||| ||||||| ||||||||| ||   ||||||||||||||||||||    
T  21749546 cactcagtattagtctctcctcaattcaaatttgtttaatttattcttaaactcttgagtttttgaacaattttttacgaacgtgttaagaacattacta 21749645  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    |||||| ||  |||||||||| ||  ||||||| |||| || ||||||||||| ||| |||||||    
T  21749646 aaagtttctatgcaaaaaattgtcttaaaatttaatttctacgtccagattttgttaattttatc 21749710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 28685286 - 28685445
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaat--tttgtagacgtgttaagaacattacta 98  Q
    |||||||||||||| |||  || ||| |||| || ||||||||||||||||||||||||||||| ||||||  |||| ||||||||||||||||||||||    
T  28685286 cactcagtattagtttctcatcaatttaaatgtgattaatttatgcttaaactcttaagtttttgaacaattatttgcagacgtgttaagaacattacta 28685385  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    |||||||||||| |||||||     |||||||| ||||||||||||| ||||||||| |||||||    
T  28685386 aaagttcctccgtaaaaaat-----caaaatttaatttatatgtccaaattttattaattttatc 28685445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 38173882 - 38174046
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgtaga--cgtgttaagaacattacta 98  Q
    |||||| |||||||| || ||| |||||||||||||||||||||| |||||||||| ||||||| ||||||||| || |  |||||||||||||||||||    
T  38173882 cactcaatattagtccctcctcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacaggcgtgttaagaacattacta 38173981  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    |||||||||   ||||||||| |||||||||||||||| || ||| ||||||| ||| |||||||    
T  38173982 aaagttcctatacaaaaaattgtcgcaaaatttgatttctacgtctagattttgttaattttatc 38174046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 40762915 - 40762763
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttt--gtagacgtgttaagaacattacta 98  Q
    ||||||||||||||| ||  || ||||||||||||||||||||||||||||||||| ||||||| |||||||||   |||||||||||||||||||||||    
T  40762915 cactcagtattagtccctcttcaattcaaatttgtttaatttatgcttaaactcttgagtttttgaacaatttttgatagacgtgttaagaacattacta 40762816  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagatttt 151  Q
    |||| |||||  ||||| ||||||| |||||||||||| || ||| |||||||    
T  40762815 aaagctcctctacaaaatattatcgtaaaatttgatttctacgtcaagatttt 40762763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 8 - 115
Target Start/End: Complemental strand, 50615379 - 50615270
Alignment:
Q  8 tattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaa--ttttgtagacgtgttaagaacattactaaaagttc 105  Q
    ||||| ||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||  |||||||||||||||||||| ||||||||||||||    
T  50615379 tattattctctgctcaattcaaatttgtttaatttattcttaaactcttaagttttttaacaattttttgtagacgtgttaagaatattactaaaagttc 50615280  T
Q  106 ctccgcaaaa 115  Q
    | ||||||||    
T  50615279 cgccgcaaaa 50615270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 75; E-Value: 9e-35
Query Start/End: Original strand, 8 - 115
Target Start/End: Complemental strand, 117742 - 117633
Alignment:
Q  8 tattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaa--ttttgtagacgtgttaagaacattactaaaagttc 105  Q
    ||||||||| ||||| ||||||||||||||||||||| |||||||||||||||||||||||||  |||| |||| |||||||||||||||||||||||||    
T  117742 tattagtctatgctcaattcaaatttgtttaatttattcttaaactcttaagttttttaacaattttttttagatgtgttaagaacattactaaaagttc 117643  T
Q  106 ctccgcaaaa 115  Q
    | ||||||||    
T  117642 cgccgcaaaa 117633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 75; E-Value: 9e-35
Query Start/End: Original strand, 28 - 163
Target Start/End: Complemental strand, 23883678 - 23883541
Alignment:
Q  28 aaatttgtttaatttatgcttaaactcttaagttttttaacaattttgt--agacgtgttaagaacattactaaaagttcctccgcaaaaaattatcgca 125  Q
    ||||||||||||||||||||||||||||  ||||||| ||||||||| |  | |||||||||||||||||||||||||||||| |||||||||| |  ||    
T  23883678 aaatttgtttaatttatgcttaaactctggagtttttgaacaattttttgcatacgtgttaagaacattactaaaagttcctctgcaaaaaattgttaca 23883579  T
Q  126 aaatttgatttatatgtccagattttattacttttatc 163  Q
    ||||||||||| || ||||||||||| ||| |||||||    
T  23883578 aaatttgatttctacgtccagattttgttaattttatc 23883541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 24 - 162
Target Start/End: Original strand, 23917331 - 23917471
Alignment:
Q  24 attcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgtaga--cgtgttaagaacattactaaaagttcctccgcaaaaaattat 121  Q
    |||||| |||||||||||||||||||||||||| ||||||| ||||||||| || |  ||||||||||||||||||||||||| ||| |||||||||| |    
T  23917331 attcaagtttgtttaatttatgcttaaactcttgagtttttgaacaattttttacaaacgtgttaagaacattactaaaagtttctctgcaaaaaattgt 23917430  T
Q  122 cgcaaaatttgatttatatgtccagattttattacttttat 162  Q
    ||||||||||||||| || ||||| ||| | ||| ||||||    
T  23917431 cgcaaaatttgatttctacgtccaaattgtgttaattttat 23917471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 25249996 - 25250148
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgta--gacgtgttaagaacattacta 98  Q
    |||||| |||||||| || ||| |||||||||||||||||||||  |||||||||| ||||||| || |||||| ||  |||||||||||||||||||||    
T  25249996 cactcactattagtccctcctcaattcaaatttgtttaatttatatttaaactcttgagtttttgaataattttttacagacgtgttaagaacattacta 25250095  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagatttt 151  Q
    |||||| ||  |||||||||| |||||||||||||||| || ||||| |||||    
T  25250096 aaagtttctatgcaaaaaattgtcgcaaaatttgatttctacgtccaaatttt 25250148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 24 - 163
Target Start/End: Original strand, 29348278 - 29348417
Alignment:
Q  24 attcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgt--agacgtgttaagaacattactaaaagttcctccgcaaaaaattat 121  Q
    ||||||||||||||||||||||||||||||  | ||||||| ||||||||| |  ||| |||||||||| ||||||||||||||||  |||||||||| |    
T  29348278 attcaaatttgtttaatttatgcttaaact--tgagtttttgaacaattttttgcagaagtgttaagaatattactaaaagttcctttgcaaaaaattgt 29348375  T
Q  122 cgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    ||||||||||||||| || ||||||||||| ||| |||||||    
T  29348376 cgcaaaatttgatttttacgtccagattttgttaattttatc 29348417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 37481371 - 37481253
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaa-gttttttaacaattttgta--gacgtgttaagaacattact 97  Q
    ||||||| ||||||||||  || ||| ||||||||||||||||||||||||||||||| |||||||||||||||| ||  || |||||||||||||||||    
T  37481371 cactcagaattagtctctcttcaatttaaatttgtttaatttatgcttaaactcttaatgttttttaacaattttttatagatgtgttaagaacattact 37481272  T
Q  98 aaaagttcctccgcaaaaa 116  Q
    |||||||||||||||||||    
T  37481271 aaaagttcctccgcaaaaa 37481253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 2 - 85
Target Start/End: Complemental strand, 41786404 - 41786321
Alignment:
Q  2 actcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgtagacgtgtt 85  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||    
T  41786404 actcagtattagtctctgctccattcaaatttgtttaatttatacataaacccttaagttttttaacaattttgtagacgtgtt 41786321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 19601529 - 19601693
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaat--tttgtagacgtgttaagaacattacta 98  Q
    ||||| ||||||||  || ||| |||||||||||||||||| ||| ||||||||||| ||||||||||| |  |||| | || |||||||||||||||||    
T  19601529 cactcggtattagtacctactcaattcaaatttgtttaatt-atgtttaaactcttatgttttttaacattcttttgcaaacatgttaagaacattacta 19601627  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccaga-ttttattacttttatc 163  Q
    ||||||||||| ||||||||||||||||||||| |||| ||  |||||| |||| |||||||||||    
T  19601628 aaagttcctccacaaaaaattatcgcaaaatttaatttctacatccagatttttgttacttttatc 19601693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 9 - 160
Target Start/End: Original strand, 27492301 - 27492454
Alignment:
Q  9 attagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgt--agacgtgttaagaacattactaaaagttcc 106  Q
    ||||||| || ||| |||||||||||||||||||||| ||||| ||||| |||||| ||||||||| |  | || |||| | |||||||||||||||| |    
T  27492301 attagtccctactcaattcaaatttgtttaatttatgtttaaattcttaggtttttgaacaattttttgcatacatgtttaaaacattactaaaagtttc 27492400  T
Q  107 tccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattactttt 160  Q
    |||||||||||||||||||||||||||||| ||  |||| ||||| ||||||||    
T  27492401 tccgcaaaaaattatcgcaaaatttgatttctacatccaaattttgttactttt 27492454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 4 - 128
Target Start/End: Original strand, 53377305 - 53377433
Alignment:
Q  4 tcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaat--tttgtagacgtgtt--aagaacattactaa 99  Q
    |||||||||||| || |||  |||||||||||||||||||||||||||||||||||||||| ||||||  |||| |||||||||  |||||||||| |||    
T  53377305 tcagtattagtccctactcatttcaaatttgtttaatttatgcttaaactcttaagtttttgaacaattgtttgcagacgtgttaaaagaacattaataa 53377404  T
Q  100 aagttcctccgcaaaaaattatcgcaaaa 128  Q
    |||||||| ||| ||||||||||||||||    
T  53377405 aagttccttcgcgaaaaattatcgcaaaa 53377433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 9 - 163
Target Start/End: Complemental strand, 44809147 - 44808991
Alignment:
Q  9 attagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaa--ttttgtagacgtgttaagaacattactaaaagttcc 106  Q
    ||||||| || ||| ||||||||||||||||||||||||||||||||  ||||||| |||||  ||||| | |||||||||||| |||||||||||||||    
T  44809147 attagtccctcctcaattcaaatttgtttaatttatgcttaaactctggagtttttaaacaattttttgcacacgtgttaagaatattactaaaagttcc 44809048  T
Q  107 tccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    |  ||||||| || |||||||||||||||| || ||| | ||||| ||| |||||||    
T  44809047 tttgcaaaaagttgtcgcaaaatttgatttttacgtcaaaattttgttaattttatc 44808991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 27 - 151
Target Start/End: Complemental strand, 39562839 - 39562713
Alignment:
Q  27 caaatttgtttaatttatgcttaaactcttaagttttttaacaattttgt--agacgtgttaagaacattactaaaagttcctccgcaaaaaattatcgc 124  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| |  ||||||||||||||| ||| |||||| ||||||| |||||| ||||||    
T  39562839 caaatttgtttaatttatgcttaaactcttaagtttttcaacaattttttacagacgtgttaagaacgttattaaaaggtcctccg-aaaaaaatatcgc 39562741  T
Q  125 -aaaatttgatttatatgtccagatttt 151  Q
     |||||||||||| || ||||| |||||    
T  39562740 aaaaatttgatttctacgtccatatttt 39562713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 24 - 145
Target Start/End: Complemental strand, 54269137 - 54269015
Alignment:
Q  24 attcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgtaga--cgtgttaagaacattactaaaagttcctccgcaaaaaattat 121  Q
    ||||||||||| |||||| |||||||||||||||||||||| ||||||||| |  |  ||||||||||||||||||||||||||||| | ||||||||||    
T  54269137 attcaaatttggttaatt-atgcttaaactcttaagtttttgaacaattttttgcatgcgtgttaagaacattactaaaagttcctctgtaaaaaattat 54269039  T
Q  122 cgcaaaatttgatttatatgtcca 145  Q
    | ||||||||||||| || |||||    
T  54269038 ctcaaaatttgatttctaagtcca 54269015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 44555344 - 44555433
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaa--ttttgtagacgtgttaag 88  Q
    |||||||||||||||  ||||| |||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| ||||||||    
T  44555344 cactcagtattagtccttgctcaattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttttgtagatgtgttaag 44555433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 50614526 - 50614615
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaa--ttttgtagacgtgttaag 88  Q
    |||||||||||||||  ||||| |||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| ||||||||    
T  50614526 cactcagtattagtccttgctcaattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttttgtagatgtgttaag 50614615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 24 - 163
Target Start/End: Original strand, 11045405 - 11045548
Alignment:
Q  24 attcaaatttgtttaatttatgcttaaactcttaagttttttaacaat-tttgtagacgtg---ttaagaacattactaaaagttcctccgcaaaaaatt 119  Q
    |||||| |||||||||||||||||||||||||| ||||||| |||| | |||| | ||||    ||||||| ||| ||||||||||||| ||||||||||    
T  11045405 attcaattttgtttaatttatgcttaaactcttgagtttttgaacattctttgcacacgtcgtattaagaaaattgctaaaagttcctctgcaaaaaatt 11045504  T
Q  120 atcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
     |||||||||||||||| || ||||||||||| ||| |||||||    
T  11045505 gtcgcaaaatttgatttctacgtccagattttgttaattttatc 11045548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 27 - 151
Target Start/End: Original strand, 46295057 - 46295183
Alignment:
Q  27 caaatttgtttaatttatgcttaaactcttaagttttttaacaa--ttttgtagacgtgttaagaacattactaaaagttcctccgcaaaaaattatcgc 124  Q
    |||||||||||||||||||||||||||||||||||||| |||||  ||||  ||||||||||||||| ||| |||||| ||||||| |||||| ||||||    
T  46295057 caaatttgtttaatttatgcttaaactcttaagtttttcaacaaatttttacagacgtgttaagaacgttattaaaaggtcctccg-aaaaaaatatcgc 46295155  T
Q  125 -aaaatttgatttatatgtccagatttt 151  Q
     |||||||||||| || ||||| |||||    
T  46295156 aaaaatttgatttctacgtccatatttt 46295183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 116904 - 116993
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaa--ttttgtagacgtgttaag 88  Q
    |||||| ||||||||  ||||| |||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| ||||||||    
T  116904 cactcaatattagtccttgctcaattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttttgtagatgtgttaag 116993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 8 - 115
Target Start/End: Complemental strand, 44557877 - 44557765
Alignment:
Q  8 tattagtctctgctccattcaaatttgtttaatttatgcttaaactc---ttaagttttttaacaa--ttttgtagacgtgttaagaacattactaaaag 102  Q
    ||||||||||||||| ||||||||||||||||||||| | |||||||   ||   |||||||||||  ||||||||||||||||||||||||||||||||    
T  44557877 tattagtctctgctcaattcaaatttgtttaatttattcctaaactcttttttttttttttaacaattttttgtagacgtgttaagaacattactaaaag 44557778  T
Q  103 ttcctccgcaaaa 115  Q
    |||| | ||||||    
T  44557777 ttccgctgcaaaa 44557765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 28 - 162
Target Start/End: Original strand, 33475476 - 33475612
Alignment:
Q  28 aaatttgtttaatttatgcttaaactcttaagttttttaacaattttgtagac--gtgttaagaacattactaaaagttcctccgcaaaaaattatcgca 125  Q
    |||||||||||||| ||||||||||| ||||| |||| ||||||||| |  ||  |||||||||||||||| |||||||| ||  |||||||||||| ||    
T  33475476 aaatttgtttaatt-atgcttaaacttttaagattttgaacaattttttgcacaagtgttaagaacattacgaaaagttcatctacaaaaaattatcaca 33475574  T
Q  126 aaatttgatttatatgtccag-attttattacttttat 162  Q
    |||||| |||| || |||||| ||||| ||||||||||    
T  33475575 aaattttatttctacgtccagaattttgttacttttat 33475612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 28 - 151
Target Start/End: Original strand, 52701168 - 52701292
Alignment:
Q  28 aaatttgtttaatttatgcttaaactcttaagttttttaacaattttgtagac--gtgttaagaacattactaaaagttcctccgcaaaaaattatcgca 125  Q
    |||||||||||||| ||||||||||| ||||| |||| ||||||||| || ||  |||||||||||||||| |||||||| ||  |||||||||||| ||    
T  52701168 aaatttgtttaatt-atgcttaaacttttaagattttgaacaattttttacacaagtgttaagaacattacgaaaagttcatctccaaaaaattatctca 52701266  T
Q  126 aaatttgatttatatgtccagatttt 151  Q
    |||||| ||||||  ||| |||||||    
T  52701267 aaattttatttatgcgtctagatttt 52701292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 71 - 163
Target Start/End: Complemental strand, 26268812 - 26268719
Alignment:
Q  71 ttttgtagacgtgttaagaacattactaaaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccaga-ttttattacttttatc 163  Q
    |||||||||||| ||||||||||||||||||||| ||| ||||||||||| | ||||||||||||| || | ||| | ||||||||||||||||    
T  26268812 ttttgtagacgtattaagaacattactaaaagtttctctgcaaaaaattagctcaaaatttgatttctacgcccatatttttattacttttatc 26268719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 28 - 136
Target Start/End: Original strand, 44555924 - 44556033
Alignment:
Q  28 aaatttgtttaatttatgcttaaactcttaagttttttaacaattttgtagac--gtgttaagaacattactaaaagttcctccgcaaaaaattatcgca 125  Q
    |||||||||||||| ||||||||||| ||||| |||| ||||||||| |  ||  |||||||||||||||| |||||||| || ||||||||||||| ||    
T  44555924 aaatttgtttaatt-atgcttaaacttttaagattttgaacaattttttgcacaagtgttaagaacattacgaaaagttcatctgcaaaaaattatctca 44556022  T
Q  126 aaatttgattt 136  Q
    |||||| ||||    
T  44556023 aaattttattt 44556033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 24 - 116
Target Start/End: Complemental strand, 3173801 - 3173707
Alignment:
Q  24 attcaaatttgtttaatttatgcttaaactcttaagttttttaacaa--ttttgtagacgtgttaagaacattactaaaagttcctccgcaaaaa 116  Q
    |||||||||||||||||||||| ||||| |||| | ||||| |||||  ||||| ||||| |||||||||||||||| ||||| ||| |||||||    
T  3173801 attcaaatttgtttaatttatgattaaattcttgaatttttgaacaattttttgcagacgcgttaagaacattactataagtttctctgcaaaaa 3173707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 32147915 - 32147860
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactctt 56  Q
    ||||||||||||||| |||||| ||||||||||||| |||||||||||||||||||    
T  32147915 cactcagtattagtccctgctcaattcaaatttgttcaatttatgcttaaactctt 32147860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 33476504 - 33476353
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgtagac--gtgttaagaacattacta 98  Q
    |||||||| |||||||||| |  ||  |||||||||||||| ||||||||||| ||||| |||| ||||||||| |  ||  || |||||||||| || |    
T  33476504 cactcagttttagtctctgttaaatctaaatttgtttaatt-atgcttaaacttttaagattttgaacaattttttgcacaggtattaagaacatcacga 33476406  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagatttt 151  Q
    ||||||  || ||||||||||||| |||||||| ||| ||  |||||||||||    
T  33476405 aaagtttatctgcaaaaaattatctcaaaattttattcatgcgtccagatttt 33476353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 32943926 - 32943871
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactctt 56  Q
    ||||||||||||||| |||||| |||| |||||||| |||||||||||||||||||    
T  32943926 cactcagtattagtccctgctcaattcgaatttgttcaatttatgcttaaactctt 32943871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 37179883 - 37179828
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactctt 56  Q
    ||||||||||||||| |||||| ||||||||||||| |||||| ||||||||||||    
T  37179883 cactcagtattagtccctgctcaattcaaatttgttcaatttaagcttaaactctt 37179828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 44 - 115
Target Start/End: Original strand, 45406698 - 45406771
Alignment:
Q  44 tgcttaaactcttaagttttttaacaattttgt--agacgtgttaagaacattactaaaagttcctccgcaaaa 115  Q
    ||||||||||||||| ||||| ||||||||| |  |||| |||| |||||||||||||||||| ||||||||||    
T  45406698 tgcttaaactcttaaatttttgaacaattttttgcagacatgtttagaacattactaaaagtttctccgcaaaa 45406771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 41 - 101
Target Start/End: Original strand, 46529628 - 46529692
Alignment:
Q  41 ttatgcttaaactcttaagttttttaacaa--ttttgtagac--gtgttaagaacattactaaaa 101  Q
    ||||||||||||||||||||||||||| ||  ||||||||||  |||||||||||||||||||||    
T  46529628 ttatgcttaaactcttaagttttttaataattttttgtagacatgtgttaagaacattactaaaa 46529692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 122 - 163
Target Start/End: Complemental strand, 117639 - 117598
Alignment:
Q  122 cgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  117639 cgcaaaatttgatttatatgtccatattttattacttttatc 117598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 51 - 122
Target Start/End: Complemental strand, 44288028 - 44287955
Alignment:
Q  51 actcttaagttttttaacaa-ttttgt-agacgtgttaagaacattactaaaagttcctccgcaaaaaattatc 122  Q
    |||||||||||||| ||||| |||||  |||||||||||||||||||||||||||||||||  | |||||||||    
T  44288028 actcttaagtttttgaacaacttttgacagacgtgttaagaacattactaaaagttcctccatacaaaattatc 44287955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 122 - 163
Target Start/End: Complemental strand, 50615276 - 50615235
Alignment:
Q  122 cgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  50615276 cgcaaaatttgatttatatgtccatattttattacttttatc 50615235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 54185631 - 54185590
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaattt 42  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  54185631 cactcagtattagtctctgctcaattcaaatttgtttaattt 54185590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 44557770 - 44557730
Alignment:
Q  123 gcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  44557770 gcaaaatttgatttatatgtccatattttattacttttatc 44557730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 1430218 - 1430163
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactctt 56  Q
    ||||||||||||||| |||||| |||||||||| || ||||||||||| |||||||    
T  1430218 cactcagtattagtccctgctcaattcaaatttattcaatttatgctttaactctt 1430163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 27868055 - 27868109
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactctt 56  Q
    ||||||||||||||| |||||| ||||||||||||| |||||| ||||||||||||    
T  27868055 cactcagtattagtccctgctcaattcaaatttgttcaattta-gcttaaactctt 27868109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 45234697 - 45234752
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactctt 56  Q
    |||| |||||||||| |||||| ||||||||||||| |||||||||||||| ||||    
T  45234697 cactaagtattagtcactgctcaattcaaatttgttcaatttatgcttaaattctt 45234752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 81 - 151
Target Start/End: Original strand, 25232717 - 25232787
Alignment:
Q  81 gtgttaagaacattactaaaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagatttt 151  Q
    |||||||||||||||| |||| ||| ||  |||||||||||| |||||||| ||||||  |||||||||||    
T  25232717 gtgttaagaacattacgaaaatttcatctacaaaaaattatctcaaaattttatttatgcgtccagatttt 25232787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 155 - 193
Target Start/End: Original strand, 32147145 - 32147183
Alignment:
Q  155 acttttatcgttttcaaaaattcatatttaattcatttc 193  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  32147145 acttttatcgttttcaaaaattcatatttaattcgtttc 32147183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 155 - 193
Target Start/End: Original strand, 53439460 - 53439498
Alignment:
Q  155 acttttatcgttttcaaaaattcatatttaattcatttc 193  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  53439460 acttttatcgttttcaaaaattcatatttaattcgtttc 53439498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 188
Target Start/End: Original strand, 37179090 - 37179123
Alignment:
Q  155 acttttatcgttttcaaaaattcatatttaattc 188  Q
    ||||||||||||||||||||||||||||||||||    
T  37179090 acttttatcgttttcaaaaattcatatttaattc 37179123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 122 - 163
Target Start/End: Original strand, 53439414 - 53439455
Alignment:
Q  122 cgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    |||||||||| ||||||||||||| |||||||||||||||||    
T  53439414 cgcaaaattttatttatatgtccaaattttattacttttatc 53439455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 136
Target Start/End: Complemental strand, 41928126 - 41928016
Alignment:
Q  28 aaatttgtttaatttatgcttaaactcttaagttttttaacaattttgtagac--gtgttaa-gaacattactaaaagttcctccgcaaaaaattatcgc 124  Q
    |||||||||||||| ||||||||||| ||||| |||| ||||||||| |  ||  ||||||| ||||||||| |||||||| |  ||||||||||||  |    
T  41928126 aaatttgtttaatt-atgcttaaacttttaagattttgaacaattttttgcacaagtgttaaagaacattacgaaaagttcatatgcaaaaaattatatc 41928028  T
Q  125 aaaatttgattt 136  Q
    ||||||| ||||    
T  41928027 aaaattttattt 41928016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 187
Target Start/End: Original strand, 53397244 - 53397276
Alignment:
Q  155 acttttatcgttttcaaaaattcatatttaatt 187  Q
    |||||||||||||||||||||||||||||||||    
T  53397244 acttttatcgttttcaaaaattcatatttaatt 53397276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 28 - 151
Target Start/End: Complemental strand, 8576191 - 8576066
Alignment:
Q  28 aaatttgtttaatttatgcttaaactcttaagttttttaacaattttgtagac--gtgttaagaacatt-actaaaagttcctccgcaaaaaattatcgc 124  Q
    |||||||||||||| ||| ||||||| ||||| |||| ||||||||| |  ||  |||||||||||||| |  |||||||| |  ||||||||||||| |    
T  8576191 aaatttgtttaatt-atgtttaaacttttaagattttgaacaattttttgcacaagtgttaagaacatttaggaaaagttcatatgcaaaaaattatctc 8576093  T
Q  125 aaaatttgatttatatgtccagatttt 151  Q
    ||||||| |||| | |||| |||||||    
T  8576092 aaaattttatttctgtgtctagatttt 8576066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 11293803 - 11293853
Alignment:
Q  24 attcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttt 74  Q
    |||||||| |||||||| ||||||||||||||| | ||||| |||||||||    
T  11293803 attcaaatctgtttaatctatgcttaaactcttgaatttttgaacaatttt 11293853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 193
Target Start/End: Original strand, 19669849 - 19669887
Alignment:
Q  155 acttttatcgttttcaaaaattcatatttaattcatttc 193  Q
    ||||||||||||||||||||||| |||||||||| ||||    
T  19669849 acttttatcgttttcaaaaattcgtatttaattcgtttc 19669887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 74
Target Start/End: Complemental strand, 52701947 - 52701902
Alignment:
Q  28 aaatttgtttaatttatgcttaaactcttaagttttttaacaatttt 74  Q
    |||||||||||||| ||||||||||||||||| |||| |||||||||    
T  52701947 aaatttgtttaatt-atgcttaaactcttaagattttgaacaatttt 52701902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 142; Significance: 1e-74; HSPs: 59)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 36368205 - 36368041
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttt--gtagacgtgttaagaacattacta 98  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  36368205 cactcagtattagtctctgctcaattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttttgtagacgtgttaagaacattacta 36368106  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    |||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  36368105 aaagtttctccgcaaaaaattatcgcaaaatttaatttatatgtccagattttattacttttatc 36368041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 4 - 163
Target Start/End: Complemental strand, 30982694 - 30982533
Alignment:
Q  4 tcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttt--gtagacgtgttaagaacattactaaaa 101  Q
    ||||||||||||| | ||| |||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||||||||    
T  30982694 tcagtattagtctatactcaattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttttgtagacgtgttaagaactttactaaaa 30982595  T
Q  102 gttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    |||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  30982594 gttcctccgctaaaaattatcacaaaatttgatttatatgtccagattttattacttttatc 30982533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 122; E-Value: 8e-63
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 33709260 - 33709096
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttt--gtagacgtgttaagaacattacta 98  Q
    ||||| ||||||||||| |||| ||||||||||||||||||||| |||||||||||||| ||||||||||||||  |||||||||||||||||||| |||    
T  33709260 cactcggtattagtctcagctcaattcaaatttgtttaatttatacttaaactcttaagatttttaacaattttttgtagacgtgttaagaacattccta 33709161  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  33709160 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtctaaattttattacttttatc 33709096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 4 - 163
Target Start/End: Complemental strand, 46597087 - 46596927
Alignment:
Q  4 tcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttt--gtagacgtgttaagaacattactaaaa 101  Q
    |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  46597087 tcagtattagtctcagctcaattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttttgtagacgtgttaagaacattactaaaa 46596988  T
Q  102 gttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    |||| |||||||||||||||||||||||||  || ||||||||||| |||||||||||||||    
T  46596987 gttcatccgcaaaaaattatcgcaaaatttagttgatatgtccaga-tttattacttttatc 46596927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 117; E-Value: 8e-60
Query Start/End: Original strand, 6 - 163
Target Start/End: Original strand, 52493513 - 52493672
Alignment:
Q  6 agtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttt--gtagacgtgttaagaacattactaaaagt 103  Q
    ||||||| || || ||| ||||||||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  52493513 agtattaatccctactcaattcaaatttgattaatttatgcttaaactcttaagttttttaacaattttttgtagacgtgttaagaacattactaaaagt 52493612  T
Q  104 tcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    ||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||    
T  52493613 tcctccgcaaaaaattatcgcaaaatttgatttctacttccagattttattacttttatc 52493672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 11999697 - 11999862
Alignment:
Q  1 cactcagtattagtctctgctccatt-caaatttgtttaatttatgcttaaactcttaagttttttaacaatttt--gtagacgtgttaagaacattact 97  Q
    |||| ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| ||||||  |||||||||||||||||||||||    
T  11999697 cactaagtattagtctctgctcaatttcaaatttgtttaatttatgcttaaactcttaagttttttaataattttttgtagacgtgttaagaacattact 11999796  T
Q  98 aaaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    |||||||| ||||||||||| |||  ||||||||||||||||||||||||||||| ||||||||||    
T  11999797 aaaagttcatccgcaaaaaaatatttcaaaatttgatttatatgtccagattttagtacttttatc 11999862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 30719459 - 30719624
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgt---agacgtgttaagaacattact 97  Q
    |||||||||||||||||| ||| |||||||||||||||||||||| |||||||||| ||||||| ||||||||| |   |||||||||||||||||||||    
T  30719459 cactcagtattagtctctcctcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacaagacgtgttaagaacattact 30719558  T
Q  98 aaaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    ||||||| ||  |||||||||| |||||||||||||||| || ||||| ||||| ||| |||||||    
T  30719559 aaaagtttctatgcaaaaaattgtcgcaaaatttgatttctacgtccaaattttgttaattttatc 30719624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 13501186 - 13501349
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgta--gacgtgttaagaacattacta 98  Q
    |||||| |||||||| || ||| |||||||||||||||||||||| |||||||||| ||||||| ||||||||| ||  |||||||||| ||||||||||    
T  13501186 cactcactattagtccctcctcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaataacattacta 13501285  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttat 162  Q
    |||||||||  |||||||||| |||||||||||||||| || ||||||||||| ||| ||||||    
T  13501286 aaagttcctatgcaaaaaattgtcgcaaaatttgatttctacgtccagattttgttaattttat 13501349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 35530766 - 35530930
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaat--tttgtagacgtgttaagaacattacta 98  Q
    |||||||||||||||  |  || ||||||||||||||||||||||||||||||||| || |||| ||||||  |||||||||||||||||||||||||||    
T  35530766 cactcagtattagtccatcatcaattcaaatttgtttaatttatgcttaaactcttgagcttttaaacaatcttttgtagacgtgttaagaacattacta 35530865  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    |||||||| | |||||||| | | |||||||||||||| || ||||||||||| ||| |||||||    
T  35530866 aaagttcccctgcaaaaaaatgttgcaaaatttgatttctacgtccagattttgttaattttatc 35530930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 4 - 136
Target Start/End: Original strand, 19791222 - 19791356
Alignment:
Q  4 tcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttt--gtagacgtgttaagaacattactaaaa 101  Q
    |||||||||||| || ||| ||||||||||||||||||||||||||||||||| ||||||| |||||||||  | |||||||||||||||||||||||||    
T  19791222 tcagtattagtccctcctcaattcaaatttgtttaatttatgcttaaactcttgagtttttgaacaatttttcgcagacgtgttaagaacattactaaaa 19791321  T
Q  102 gttcctccgcaaaaaattatcgcaaaatttgattt 136  Q
    |||| ||  ||||||||| ||||||||||||||||    
T  19791322 gttcatctacaaaaaattgtcgcaaaatttgattt 19791356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 8 - 115
Target Start/End: Complemental strand, 37987002 - 37986893
Alignment:
Q  8 tattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaa--ttttgtagacgtgttaagaacattactaaaagttc 105  Q
    ||||||||||||||| ||||||||||||||||||||| ||||||||||||| |||||||||||  |||||||||||||||||||||||||||||||||||    
T  37987002 tattagtctctgctcaattcaaatttgtttaatttattcttaaactcttaaattttttaacaattttttgtagacgtgttaagaacattactaaaagttc 37986903  T
Q  106 ctccgcaaaa 115  Q
    | ||||||||    
T  37986902 cgccgcaaaa 37986893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 15053620 - 15053771
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttt--gtagacgtgttaagaacattacta 98  Q
    |||||| ||||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  15053620 cactcaatattagtttctgctcaattcaaatttgtttaatttattcttaaactcttaagttttttaacaattttttgtagacgtgttaagaacattacta 15053719  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    |||||||| || ||||             |||||||||||||||||| |||||||||||||||||    
T  15053720 aaagttccgccacaaa-------------atttgatttatatgtccatattttattacttttatc 15053771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 21091031 - 21091190
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttt--gtagacgtgttaagaacattacta 98  Q
    |||||| |||||||| || ||| ||||||||||||||| |||||| |||||||||||||||||  |||||||||  |||||||||||| |||||||||      
T  21091031 cactcaatattagtccctactcaattcaaatttgtttagtttatgtttaaactcttaagtttta-aacaattttttgtagacgtgttacgaacattacat 21091129  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttt 159  Q
    ||||||| ||| ||| |||||||| ||||||||||||||||||| ||||||||||||||||    
T  21091130 aaagttcatccacaataaattatctcaaaatttgatttatatgttcagattttattacttt 21091190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 8 - 115
Target Start/End: Complemental strand, 12368538 - 12368429
Alignment:
Q  8 tattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaa--ttttgtagacgtgttaagaacattactaaaagttc 105  Q
    |||||||||||||||  |||||||||||||||||||| |||||||||||||||||||||||||  ||||||||||||||||||||||||| |||||||||    
T  12368538 tattagtctctgctcagttcaaatttgtttaatttattcttaaactcttaagttttttaacaattttttgtagacgtgttaagaacattattaaaagttc 12368439  T
Q  106 ctccgcaaaa 115  Q
    | ||||||||    
T  12368438 cgccgcaaaa 12368429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 51561662 - 51561525
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgta--gacgtgttaagaacattacta 98  Q
    |||||| |||||||| || ||| ||||||||||||||| |||||| |||||||||| ||||||| ||||||||| ||  |||||||||||||||||||||    
T  51561662 cactcactattagtccctcctcaattcaaatttgtttactttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacattacta 51561563  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgattt 136  Q
    |||||||||  |||||||||| ||||||||||||||||    
T  51561562 aaagttcctatgcaaaaaattgtcgcaaaatttgattt 51561525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 2 - 163
Target Start/End: Complemental strand, 26020713 - 26020550
Alignment:
Q  2 actcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgt--agacgtgttaagaacattactaa 99  Q
    ||||||||||||||  | ||  |||||||||||||||||||||||||||| |||| ||||||| ||||||||| |  |||||||||||||||||||||||    
T  26020713 actcagtattagtccttccttaattcaaatttgtttaatttatgcttaaaatcttgagtttttgaacaattttttgcagacgtgttaagaacattactaa 26020614  T
Q  100 aagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    ||| |||||  || |||||| |||||||||||||||| || || |||||||| ||| |||||||    
T  26020613 aagctcctctacataaaattgtcgcaaaatttgatttctacgttcagattttgttaattttatc 26020550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 26805806 - 26805643
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttt--gtagacgtgttaagaacattacta 98  Q
    ||||||||||||||| ||  || |||||||||||||||||| |||||||||||||| | ||||| |||||||||  |||||||||||||||| |||||||    
T  26805806 cactcagtattagtccctcttcaattcaaatttgtttaatt-atgcttaaactcttgaatttttaaacaattttttgtagacgtgttaagaatattacta 26805708  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    |||||||||| ||||||||   || ||||||||||||| || || |||||||| ||| |||||||    
T  26805707 aaagttcctctgcaaaaaaaattcacaaaatttgatttttacgttcagattttgttaattttatc 26805643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 9 - 163
Target Start/End: Original strand, 28700942 - 28701099
Alignment:
Q  9 attagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgtag---acgtgttaagaacattactaaaagttc 105  Q
    ||||||| || ||| ||||||||||||||||||||||||||||||||| ||||||| ||||||||| | |   | |||||||||| ||||||||||||||    
T  28700942 attagtcactcctcaattcaaatttgtttaatttatgcttaaactcttgagtttttgaacaatttttttgcaaatgtgttaagaatattactaaaagttc 28701041  T
Q  106 ctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    ||| || ||||||| | ||||||||||||||  | ||||||||||| ||| |||||||    
T  28701042 ctctgcgaaaaattgtagcaaaatttgatttccacgtccagattttgttaattttatc 28701099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 8 - 159
Target Start/End: Original strand, 36248320 - 36248460
Alignment:
Q  8 tattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattt--tgtagacgtgttaagaacattactaaaagttc 105  Q
    ||||||||| ||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||  ||||||| ||||||||| ||||||||||||||    
T  36248320 tattagtctatgctcaattcaaatttgtttaatttattcttaaactcttaagttttttaacaatttcttgtagacatgttaagaatattactaaaagttc 36248419  T
Q  106 ctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttt 159  Q
    |              ||||||||||||||||||||||||| |||||||||||||    
T  36248420 cg-------------tcgcaaaatttgatttatatgtccatattttattacttt 36248460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 31400199 - 31400351
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgt--agacgtgttaagaacattacta 98  Q
    |||||| ||||||||  | ||| |||||||||||||||||||||| |||||||||||||||||| ||||||||| |  ||||||||||||||| ||| ||    
T  31400199 cactcaatattagtccttactcaattcaaatttgtttaatttatgtttaaactcttaagtttttcaacaattttttacagacgtgttaagaacgttatta 31400298  T
Q  99 aaagttcctccgcaaaaaattatcgc-aaaatttgatttatatgtccagatttt 151  Q
    |||| ||||||| |||||| |||||| |||||||||||| || ||||| |||||    
T  31400299 aaaggtcctccg-aaaaaaatatcgcaaaaatttgatttctacgtccatatttt 31400351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 28 - 136
Target Start/End: Complemental strand, 33707658 - 33707549
Alignment:
Q  28 aaatttgtttaatttatgcttaaactcttaagttttttaacaat--tttgtagacgtgttaagaacattactaaaagttcctccgcaaaaaattatcgca 125  Q
    |||||||||||||| || ||||||||||||| ||||| ||||||  |||| ||||||||| ||||||||||||||||||||| |||||||||||||| ||    
T  33707658 aaatttgtttaatt-attcttaaactcttaattttttgaacaatcttttgcagacgtgttgagaacattactaaaagttccttcgcaaaaaattatctca 33707560  T
Q  126 aaatttgattt 136  Q
    |||||||||||    
T  33707559 aaatttgattt 33707549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 193
Target Start/End: Original strand, 43504755 - 43504954
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttt--gtagacgtgttaagaacattacta 98  Q
    ||||||||||||||| || ||| |||||||||||||||||||||||||||||| || ||||||| |||||||||    ||| |||||||||||||||| |    
T  43504755 cactcagtattagtccctcctcaattcaaatttgtttaatttatgcttaaacttttgagtttttgaacaatttttaacagaagtgttaagaacattacga 43504854  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttatt------acttttatcgttttcaaaaattcatatttaattcattt 192  Q
    ||||||| ||  |||||| || | |  ||||||||||| || ||||||||||| ||      |||||| ||||| | ||||||||||||||||||| |||    
T  43504855 aaagttcatctacaaaaagttgttg-taaatttgatttttacgtccagattttgttaatttaacttttgtcgttctaaaaaattcatatttaattcgttt 43504953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 36249174 - 36249101
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttt 74  Q
    |||||||||||||||  ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36249174 cactcagtattagtccttgctcgattcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttt 36249101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 42 - 163
Target Start/End: Complemental strand, 47008920 - 47008797
Alignment:
Q  42 tatgcttaaactcttaagttttttaacaattttgta--gacgtgttaagaacattactaaaagttcctccgcaaaaaattatcgcaaaatttgatttata 139  Q
    |||| |||||||||| ||||||| ||||||||| ||  ||||||||||||||||||||||||||||||| |||||||||| | ||||||||| |||| ||    
T  47008920 tatgtttaaactcttgagtttttgaacaattttttacagacgtgttaagaacattactaaaagttcctctgcaaaaaattgttgcaaaatttaatttcta 47008821  T
Q  140 tgtccagattttattacttttatc 163  Q
     ||||| ||||| ||| |||||||    
T  47008820 cgtccacattttgttaattttatc 47008797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 24 - 163
Target Start/End: Complemental strand, 10041532 - 10041391
Alignment:
Q  24 attcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgtagacgtgt--taagaacattactaaaagttcctccgcaaaaaattat 121  Q
    |||||||||||||||||||||| ||||| |||| ||||||| ||||||||| || | ||||  |||  |||||||||||||||||||  | ||||||| |    
T  10041532 attcaaatttgtttaatttatgtttaaattcttgagtttttaaacaattttttataggtgtgttaaacacattactaaaagttcctcttcgaaaaattgt 10041433  T
Q  122 cgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    |||||||||| |||| || || |||||||||||| |||||||    
T  10041432 cgcaaaatttaatttctacgttcagattttattaattttatc 10041391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 15054507 - 15054418
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaa--ttttgtagacgtgttaag 88  Q
    |||||||||||||||  ||||| |||||||||| ||||||||||||||||||||||||||||||||||||  ||||||||| ||||||||    
T  15054507 cactcagtattagtccttgctcaattcaaatttatttaatttatgcttaaactcttaagttttttaacaattttttgtagatgtgttaag 15054418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 24 - 119
Target Start/End: Original strand, 21794413 - 21794510
Alignment:
Q  24 attcaaatttgtttaatttatgcttaaactcttaagttttttaacaa--ttttgtagacgtgttaagaacattactaaaagttcctccgcaaaaaatt 119  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||  ||||| | ||||||||||||||||| ||||||||||||  |||||||||    
T  21794413 attcaaatttgtttaatttatgcttaaactcttgagtttttgaacaattttttgcacacgtgttaagaacattaataaaagttcctctacaaaaaatt 21794510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 29231959 - 29231886
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttt 74  Q
    |||||||||||||||  || || |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29231959 cactcagtattagtccttgttcaattcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttt 29231886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 27 - 151
Target Start/End: Complemental strand, 31024345 - 31024220
Alignment:
Q  27 caaatttgtttaatttatgcttaaactcttaagttttttaacaattt--tgtagacgtgttaagaacattactaaaagttcctccgcaaaaaattatcgc 124  Q
    |||||||||| |||| ||| ||||||||||| |||||| ||||||||  |||||||||||||||| ||||||||||||||| |||| || ||||||||      
T  31024345 caaatttgttcaatt-atgtttaaactcttatgtttttgaacaatttcttgtagacgtgttaagaccattactaaaagttcatccgtaacaaattatctt 31024247  T
Q  125 aaaatttgatttatatgtccagatttt 151  Q
    |||||||||||| ||||| || |||||    
T  31024246 aaaatttgatttctatgttcatatttt 31024220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 3 - 190
Target Start/End: Original strand, 42971933 - 42972121
Alignment:
Q  3 ctcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaat--tttgtagacgtgttaagaacattactaaa 100  Q
    |||||| |||||| || ||  |||||||| ||||||||| ||| |||||||||||||||||  || |||  ||||||||||||||||||| |||||||||    
T  42971933 ctcagttttagtcccttctaaattcaaatctgtttaatt-atgtttaaactcttaagttttagaaaaatcttttgtagacgtgttaagaatattactaaa 42972031  T
Q  101 agttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagatttt-attacttttatcgttttcaaaaattcatatttaattcat 190  Q
    ||||| |||  ||||||||| | |||||||| |||| || || ||||||||  |||||||| ||||||   |||| |||||||||||||||    
T  42972032 agttcatcc-aaaaaaattagctcaaaatttaatttctacgttcagattttcgttacttttgtcgtttaagaaaaatcatatttaattcat 42972121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 12367683 - 12367772
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaa--ttttgtagacgtgttaag 88  Q
    ||||||| |||||||  ||||| |||||||||||||||||||||| ||||||||||||||||||||||||  ||||||||| ||||||||    
T  12367683 cactcaggattagtccttgctcaattcaaatttgtttaatttatgtttaaactcttaagttttttaacaattttttgtagatgtgttaag 12367772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 37986189 - 37986278
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaa--ttttgtagacgtgttaag 88  Q
    |||||| ||||||||  ||||| ||||||||||||||||||||||||||||||||||| |||||||||||  ||||||||| ||||||||    
T  37986189 cactcattattagtccttgctcaattcaaatttgtttaatttatgcttaaactcttaaattttttaacaattttttgtagatgtgttaag 37986278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 27 - 151
Target Start/End: Complemental strand, 7565468 - 7565343
Alignment:
Q  27 caaatttgtttaatttatgcttaaactcttaagttttttaacaattt--tgtagacgtgttaagaacattactaaaagttcctccgcaaaaaattatcgc 124  Q
    |||||||||||| || ||| ||||| ||||| | |||| ||||||||  |||||||||||||| ||||||| ||||| ||| |||| ||||||||||| |    
T  7565468 caaatttgtttagtt-atgtttaaattcttatgcttttgaacaatttcttgtagacgtgttaaaaacattaataaaaattcatccgtaaaaaattatctc 7565370  T
Q  125 aaaatttgatttatatgtccagatttt 151  Q
    |||||||||||| |||||||| |||||    
T  7565369 aaaatttgatttctatgtccatatttt 7565343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 28 - 162
Target Start/End: Complemental strand, 12251656 - 12251520
Alignment:
Q  28 aaatttgtttaatttatgcttaaactcttaagttttttaacaattttgtagac--gtgttaagaacattactaaaagttcctccgcaaaaaattatcgca 125  Q
    |||||||||||||| ||||||||||| ||||| |||| ||||||||| |  ||  |||||||||||||||| |||||||| || ||||||||||||| ||    
T  12251656 aaatttgtttaatt-atgcttaaacttttaagattttgaacaattttttgcacaagtgttaagaacattacgaaaagttcatctgcaaaaaattatctca 12251558  T
Q  126 aaatttgatttatatgtccag-attttattacttttat 162  Q
    |||||| |||| |  |||||| ||||| ||||||||||    
T  12251557 aaattttatttctgcgtccagaattttgttacttttat 12251520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 28 - 162
Target Start/End: Original strand, 27550800 - 27550936
Alignment:
Q  28 aaatttgtttaatttatgcttaaactcttaagttttttaacaattttgtagac--gtgttaagaacattactaaaagttcctccgcaaaaaattatcgca 125  Q
    |||||||||||||| || |||||||| ||||| |||| ||||||||| |  ||  |||||||||||||||| |||||||| || ||||||||||||| ||    
T  27550800 aaatttgtttaatt-atacttaaacttttaagattttgaacaattttttgcacaagtgttaagaacattacgaaaagttcatctgcaaaaaattatctca 27550898  T
Q  126 aaatttgatttatatgtccag-attttattacttttat 162  Q
    |||||| |||| |  |||||| ||||| ||||||||||    
T  27550899 aaattttatttctgcgtccagaattttgttacttttat 27550936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 28 - 162
Target Start/End: Complemental strand, 49768696 - 49768560
Alignment:
Q  28 aaatttgtttaatttatgcttaaactcttaagttttttaacaattttgtagac--gtgttaagaacattactaaaagttcctccgcaaaaaattatcgca 125  Q
    |||||||||||||| ||||||||||| ||||| |||| ||   |||| | |||  |||||||||||||||| |||||||| |  ||||||||||||| ||    
T  49768696 aaatttgtttaatt-atgcttaaacttttaagattttgaaattttttttggacaagtgttaagaacattacgaaaagttcatttgcaaaaaattatctca 49768598  T
Q  126 aaatttgatttatatgtccag-attttattacttttat 162  Q
    |||||| |||| || |||||| ||||||||||||||||    
T  49768597 aaattttatttctacgtccagaattttattacttttat 49768560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 36362457 - 36362512
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactctt 56  Q
    ||||||||||||||| |||||| ||||||||||||| |||||||||||||||||||    
T  36362457 cactcagtattagtccctgctcaattcaaatttgttcaatttatgcttaaactctt 36362512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 2059079 - 2059129
Alignment:
Q  24 attcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttt 74  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  2059079 attcaaatttgtttaatttatgcttaaactcttgagtttttgaacaatttt 2059129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 110 - 163
Target Start/End: Original strand, 39681884 - 39681937
Alignment:
Q  110 gcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    ||||||||||||||||||||||||||| ||  ||||||||||||||||||||||    
T  39681884 gcaaaaaattatcgcaaaatttgatttctacatccagattttattacttttatc 39681937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 28 - 136
Target Start/End: Original strand, 11397039 - 11397148
Alignment:
Q  28 aaatttgtttaatttatgcttaaactcttaagttttttaacaattttgtagac--gtgttaagaacattactaaaagttcctccgcaaaaaattatcgca 125  Q
    |||||||||||||| ||||||||||  ||||| |||| ||||||||| |  ||  |||||||||||||||| |||||||| ||  |||||||||||| ||    
T  11397039 aaatttgtttaatt-atgcttaaacatttaagattttgaacaattttttgcacaagtgttaagaacattacgaaaagttcatctccaaaaaattatctca 11397137  T
Q  126 aaatttgattt 136  Q
    |||||| ||||    
T  11397138 aaattttattt 11397148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 33708299 - 33708354
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactctt 56  Q
    ||||||||||||||| |||||| ||||||| ||||| |||||||||||||||||||    
T  33708299 cactcagtattagtccctgctcaattcaaaattgttcaatttatgcttaaactctt 33708354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 30981733 - 30981783
Alignment:
Q  6 agtattagtctctgctccattcaaatttgtttaatttatgcttaaactctt 56  Q
    ||||||||||||||||| ||||||||||| | |||||||||||||||||||    
T  30981733 agtattagtctctgctcaattcaaatttgatcaatttatgcttaaactctt 30981783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 122
Target Start/End: Complemental strand, 48218138 - 48218043
Alignment:
Q  28 aaatttgtttaatttatgcttaaactcttaagttttttaacaattttgtagac--gtgttaagaacattactaaaagttcctccgcaaaaaattatc 122  Q
    |||||||||||||| ||||||||||| | ||| |||| ||||||||| |  ||  |||||||||||||||| |||||||| || |||||||||||||    
T  48218138 aaatttgtttaatt-atgcttaaactttaaagattttgaacaattttttgcacaagtgttaagaacattacaaaaagttcatctgcaaaaaattatc 48218043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 24 - 105
Target Start/End: Original strand, 13083447 - 13083529
Alignment:
Q  24 attcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgt--agacgtgttaagaacattactaaaagttc 105  Q
    ||||||| |||||||||| ||||||| ||||| |||||||| ||||| ||| |  ||| |||||||||||||||||||||||||    
T  13083447 attcaaacttgtttaatt-atgcttatactctcaagtttttgaacaacttttttcagatgtgttaagaacattactaaaagttc 13083529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 41 - 134
Target Start/End: Original strand, 26207482 - 26207576
Alignment:
Q  41 ttatgcttaaactcttaagttttttaacaattttgtaga--cgtgttaagaacattactaaaagttcctccgcaaaaaattatcgcaaaatttgat 134  Q
    ||||||||| |||||||||||||  ||||||||| | ||  | |||||||||||||||||||||||  |||| ||||||||||| ||| |||||||    
T  26207482 ttatgcttagactcttaagttttagaacaattttttcgaaacatgttaagaacattactaaaagttattccg-aaaaaattatctcaatatttgat 26207576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 6216695 - 6216557
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattt---tgtagacgtgttaagaacattact 97  Q
    |||||| | ||||||||| ||  ||| |||||||||||||| ||| ||||||||||| |||||| | ||||||   || | || ||||||||||||||||    
T  6216695 cactcaattttagtctctactaaatttaaatttgtttaatt-atggttaaactcttaggtttttga-caatttgtttgcaaacttgttaagaacattact 6216598  T
Q  98 aaaagttcctccgcaa--aaaattatcgcaaaatttgattt 136  Q
    |||   ||||||||||  ||||||||| |||||||||||||    
T  6216597 aaacaatcctccgcaaaaaaaattatctcaaaatttgattt 6216557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 151
Target Start/End: Original strand, 25351963 - 25352085
Alignment:
Q  28 aaatttgtttaatttatgcttaaactcttaagttttttaacaa--ttttgtagacgtgttaagaacattactaaaagttcctccgcaaaaaattatcgca 125  Q
    |||||||||||||| ||||||||||| ||||| |||| |||||  ||||| | | ||||||| |||||||| |||||||| ||  |||||||||||| |     
T  25351963 aaatttgtttaatt-atgcttaaacttttaagattttgaacaattttttgcacaagtgttaaaaacattacgaaaagttcatctccaaaaaattatctc- 25352060  T
Q  126 aaatttgatttatatgtccagatttt 151  Q
     ||||| ||||||  |||||||||||    
T  25352061 -aattttatttatgcgtccagatttt 25352085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 46596133 - 46596188
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactctt 56  Q
    |||||||||||||||  | ||| ||||||||||||| |||||||||||||||||||    
T  46596133 cactcagtattagtccatactcaattcaaatttgttcaatttatgcttaaactctt 46596188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 28 - 151
Target Start/End: Original strand, 49767693 - 49767817
Alignment:
Q  28 aaatttgtttaatttatgcttaaactcttaagttttttaacaattttgtagac--gtgttaagaacattactaaaagttcctccgcaaaaaattatcgca 125  Q
    |||||||||||||| ||||||||||| ||||| |||| ||||||||| |  ||  || |||||||||| || |||||||  || ||||||||||||| ||    
T  49767693 aaatttgtttaatt-atgcttaaacttttaagattttgaacaattttttgcacaagtattaagaacatcacgaaaagtttatctgcaaaaaattatctca 49767791  T
Q  126 aaatttgatttatatgtccagatttt 151  Q
    ||| || |||| |  |||||||||||    
T  49767792 aaaatttatttctgcgtccagatttt 49767817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 13501526 - 13501454
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttt 74  Q
    |||||| ||||| || || ||| |||||||||||||||||| || ||||||||||||| ||||| |||||||||    
T  13501526 cactcactattaatccctcctcaattcaaatttgtttaatt-atccttaaactcttaaatttttgaacaatttt 13501454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 188
Target Start/End: Complemental strand, 46596922 - 46596889
Alignment:
Q  155 acttttatcgttttcaaaaattcatatttaattc 188  Q
    ||||||||||||||||||||||||||||||||||    
T  46596922 acttttatcgttttcaaaaattcatatttaattc 46596889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 92 - 151
Target Start/End: Original strand, 23176061 - 23176120
Alignment:
Q  92 attactaaaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagatttt 151  Q
    |||| ||||||||| |||||||||||||| | ||||||||||||| || ||||| |||||    
T  23176061 attattaaaagttcatccgcaaaaaattagctcaaaatttgatttttaagtccaaatttt 23176120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 33 - 72
Target Start/End: Original strand, 29231322 - 29231361
Alignment:
Q  33 tgtttaatttatgcttaaactcttaagttttttaacaatt 72  Q
    |||||||||||| ||||||||||||| |||||||||||||    
T  29231322 tgtttaatttattcttaaactcttaatttttttaacaatt 29231361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 28 - 74
Target Start/End: Original strand, 35188186 - 35188233
Alignment:
Q  28 aaatttgtttaatttatgcttaaactcttaagtttttt-aacaatttt 74  Q
    |||||||||||||||||| |||||||||||| |||||| |||||||||    
T  35188186 aaatttgtttaatttatgtttaaactcttaatttttttcaacaatttt 35188233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 48410127 - 48410202
Alignment:
Q  28 aaatttgtttaatttatgcttaaactctt-aagttttttaacaattttgt--agacgtgttaagaacattactaaaa 101  Q
    |||||||||||||| ||||||||||| || ||| |||| ||||||||| |  ||| |||||||||||||||||||||    
T  48410127 aaatttgtttaatt-atgcttaaactttttaagattttgaacaattttttgcagaagtgttaagaacattactaaaa 48410202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 51561320 - 51561392
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttt 74  Q
    |||||| |||||||| || ||| ||||||||||| |||| |||| ||||||||||||| ||||| ||| |||||    
T  51561320 cactcactattagtccctcctcaattcaaatttg-ttaaattatccttaaactcttaaatttttgaacgatttt 51561392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 51841318 - 51841246
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttt 74  Q
    |||||||| |||||| |||||  ||  |||||||||||||| ||||||||||| ||||| |||| |||||||||    
T  51841318 cactcagttttagtccctgctaaatctaaatttgtttaatt-atgcttaaacttttaagattttgaacaatttt 51841246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 193
Target Start/End: Original strand, 11999869 - 11999905
Alignment:
Q  157 ttttatcgttttcaaaaattcatatttaattcatttc 193  Q
    |||||||||||| ||||||||||||||||||| ||||    
T  11999869 ttttatcgtttttaaaaattcatatttaattcgtttc 11999905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 187
Target Start/End: Original strand, 36248473 - 36248505
Alignment:
Q  155 acttttatcgttttcaaaaattcatatttaatt 187  Q
    |||||||| ||||||||||||||||||||||||    
T  36248473 acttttattgttttcaaaaattcatatttaatt 36248505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 134; Significance: 6e-70; HSPs: 58)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 43933049 - 43932885
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttt--gtagacgtgttaagaacattacta 98  Q
    ||||| |||||||| | ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||||||||||||    
T  43933049 cactcggtattagtttttgctcaattcaaatttgtttaatttatgcttaaactcttaagttttttaataattttttgtagacgtgttaagaacattacta 43932950  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43932949 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 43932885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 122; E-Value: 8e-63
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 42487983 - 42487820
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttt--gtagacgtgttaagaacattacta 98  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||| ||||||||||||||| ||    
T  42487983 cactcagtattagtctctgctcaattcaaatttgtttaatttatgcttaaactcttaa-ttttttaacaattttttgtagatgtgttaagaacattatta 42487885  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  42487884 aaagttcctctgcaaaaaataatcgcaaaatttgatttatatgtccatattttattacttttatc 42487820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 122; E-Value: 8e-63
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 44492863 - 44493027
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttt--gtagacgtgttaagaacattacta 98  Q
    |||||||||||||||| ||||| |||||||||||||||| ||||| | ||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  44492863 cactcagtattagtctttgctcaattcaaatttgtttaagttatgttgaaactcttaagttttttaacaattttttgtagacgtgttaagaacattacta 44492962  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    |||||| | | ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44492963 aaagtttccctgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 44493027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 20719346 - 20719212
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaa--ttttgtagacgtgttaagaacattacta 98  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||  |||||| |||||||||||||||||||||    
T  20719346 cactcagtattagtctctgctcaattcaaatttgtttaatttatgcttaaactcttaagttttctaacaattttttgttgacgtgttaagaacattacta 20719247  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttga 133  Q
    ||||||||||||||||||| |||||||||||||||    
T  20719246 aaagttcctccgcaaaaaactatcgcaaaatttga 20719212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 6 - 163
Target Start/End: Original strand, 20719934 - 20720092
Alignment:
Q  6 agtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgt---agacgtgttaagaacattactaaaag 102  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||||   |||||||||||||||||| |   ||||||||||||||||||||||||||    
T  20719934 agtattagtctctactcaattcaaatttgtttaatttatgcttaaact---aagttttttaacaatttttttatagacgtgttaagaacattactaaaag 20720030  T
Q  103 ttcctccgcaaaaaatta-tcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    ||||||||||||||| || |||||||||||||||||||||| ||||||||||||||||||||    
T  20720031 ttcctccgcaaaaaaataatcgcaaaatttgatttatatgttcagattttattacttttatc 20720092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 31771296 - 31771460
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttt--gtagacgtgttaagaacattacta 98  Q
    ||||| ||||||||| |||||| |||||||||||||||||| |||| ||||||||||||||||| |||||||||  ||| ||||||||||||||||||||    
T  31771296 cactcggtattagtccctgctcaattcaaatttgtttaattgatgcataaactcttaagtttttgaacaattttttgtaaacgtgttaagaacattacta 31771395  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    ||||||||||||||||||||||| ||||||||| |||| ||  ||||||||||||||||||||||    
T  31771396 aaagttcctccgcaaaaaattattgcaaaatttaatttctacatccagattttattacttttatc 31771460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 99; E-Value: 4e-49
Query Start/End: Original strand, 4 - 163
Target Start/End: Complemental strand, 33832435 - 33832274
Alignment:
Q  4 tcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttt--gtagacgtgttaagaacattactaaaa 101  Q
    |||||||||||| || ||| ||||||||||||||||||||||||||||||||| ||||||| |||||||||  |||||||||||||||||||||||||||    
T  33832435 tcagtattagtccctcctcaattcaaatttgtttaatttatgcttaaactcttgagtttttgaacaatttttcgtagacgtgttaagaacattactaaaa 33832336  T
Q  102 gttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    |||||||  ||||||||| |||||||||||||||| || ||||||| ||| ||| |||||||    
T  33832335 gttcctctacaaaaaattgtcgcaaaatttgatttgtacgtccagaatttgttaattttatc 33832274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 4 - 163
Target Start/End: Original strand, 10357298 - 10357459
Alignment:
Q  4 tcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgt--agacgtgttaagaacattactaaaa 101  Q
    |||||||||||| || ||| ||||||||||||||||||||||||||||||||| ||||||| ||||||||| |  |||||||||||||||||||||||||    
T  10357298 tcagtattagtccctcctcgattcaaatttgtttaatttatgcttaaactcttgagtttttgaacaattttttgcagacgtgttaagaacattactaaaa 10357397  T
Q  102 gttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    ||||||| |||||||||| ||| |||||||||||| || | ||||||||| ||| |||||||    
T  10357398 gttcctctgcaaaaaattgtcgaaaaatttgatttctacgcccagattttgttaattttatc 10357459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 8 - 163
Target Start/End: Complemental strand, 42274609 - 42274452
Alignment:
Q  8 tattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaa--ttttgtagacgtgttaagaacattactaaaagttc 105  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||| | ||||||  |||||  ||||| ||||||||||| |||||||||||||||||    
T  42274609 tattagtctctcctcaattcaaatttgtttaatttatgcttaaactcatgagttttcaaacaaatttttgcagacgtgttaaaaacattactaaaagttc 42274510  T
Q  106 ctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    ||| |||||||||| |||||||||||||||| |||||| ||||||| ||| |||||||    
T  42274509 ctctgcaaaaaattgtcgcaaaatttgatttctatgtctagattttgttaattttatc 42274452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 1 - 193
Target Start/End: Complemental strand, 33001175 - 33000971
Alignment:
Q  1 cactcagtattagtctctgctccatt-caaatttgtttaatttatgcttaaactcttaagttttttaacaatttt--gtagacgtgttaagaacattact 97  Q
    |||||||||||||||  || || ||| ||||||| |||||||||| |  ||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  33001175 cactcagtattagtccttgttcaatttcaaatttctttaatttatac--aaactcttaagttttttaacaattttttgtagacgtgttaagaacattact 33001078  T
Q  98 aaaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattt------------tattacttttatcgttttcaaaaattcatatttaa 185  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||||||||            | | |||||||||||||||||||||||||||||||    
T  33001077 aaaagttactccgcaaaaaattatcgcaaaatttga-ttatatgtccagatttaatacttttctctttaacttttatcgttttcaaaaattcatatttaa 33000979  T
Q  186 ttcatttc 193  Q
    ||| ||||    
T  33000978 ttcgtttc 33000971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 41120718 - 41120882
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgt--agacgtgttaagaacattacta 98  Q
    ||||||||||||||| ||  || |||||||||||||||||||||||||||||| || ||||||| ||||||||| |  ||||||||||||||||||||||    
T  41120718 cactcagtattagtccctcttcaattcaaatttgtttaatttatgcttaaacttttgagtttttaaacaattttttgcagacgtgttaagaacattacta 41120817  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    |||||||||| |||||||||| |||  ||||||||||| || ||||| ||||| ||| |||||||    
T  41120818 aaagttcctctgcaaaaaattgtcgtgaaatttgatttctacgtccatattttgttaattttatc 41120882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 30784165 - 30784316
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaa--ttttgtagacgtgttaagaacattacta 98  Q
    ||||||||||||||| || ||| ||||||||||||||||||||||||||||||||||||||||  |||||  ||||| ||||||||||||||||||||||    
T  30784165 cactcagtattagtccctcctcaattcaaatttgtttaatttatgcttaaactcttaagttttagaacaattttttgcagacgtgttaagaacattacta 30784264  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattt 150  Q
    |||| || || ||||| |||| |||||||||||||||| || ||||| ||||    
T  30784265 aaagctcatctgcaaataattgtcgcaaaatttgatttctacgtccatattt 30784316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 4 - 163
Target Start/End: Original strand, 35498571 - 35498732
Alignment:
Q  4 tcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttt--gtagacgtgttaagaacattactaaaa 101  Q
    |||||||||||| || ||| ||||||||||||||||||||||||||||||||| |||| || |||||||||  | |||||||||||||||||||||||||    
T  35498571 tcagtattagtcccttctcaattcaaatttgtttaatttatgcttaaactcttgagttgttgaacaatttttcgcagacgtgttaagaacattactaaaa 35498670  T
Q  102 gttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    ||| |||  ||||||||| |||| ||||||||||| || ||||||| ||| ||| |||||||    
T  35498671 gtttctctacaaaaaattgtcgcgaaatttgatttctacgtccagaatttgttaattttatc 35498732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 25666018 - 25666180
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgta--gacgtgttaagaacattacta 98  Q
    ||||||||||||||| || ||| |||||||||| ||||||||||  |||||||||| ||||||| ||||||||| ||  ||||| |||||||||||||||    
T  25666018 cactcagtattagtccctcctcaattcaaatttatttaatttatatttaaactcttgagtttttgaacaattttttacagacgtattaagaacattacta 25666117  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattactttta 161  Q
    |||||||||  || ||||||| |||||||||||||||| || ||||||||||| ||| |||||    
T  25666118 aaagttcctatgcgaaaaattgtcgcaaaatttgatttctacgtccagattttgttaatttta 25666180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 8 - 115
Target Start/End: Complemental strand, 20721524 - 20721415
Alignment:
Q  8 tattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaa--ttttgtagacgtgttaagaacattactaaaagttc 105  Q
    ||||| ||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  20721524 tattaatctctgctcaattcaaatttgtttaatttattcttaaactcttaagttttttaacaattttttgtagacgtgttaagaacattactaaaagttc 20721425  T
Q  106 ctccgcaaaa 115  Q
    | || |||||    
T  20721424 cgccacaaaa 20721415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 3043676 - 3043512
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaa--ttttgtagacgtgttaagaacattacta 98  Q
    |||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||| | || || |||||  ||||| ||||||||||| ||||||||||    
T  3043676 cactaagtattagtctctcctcaattcaaatttgtttaatttatgcttaaactcttgaattattgaacaattttttgcagacgtgttaaaaacattacta 3043577  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    |||| | ||| |||||||||| | |||||||||||||| || ||||| ||||| ||| |||||||    
T  3043576 aaagctactctgcaaaaaattgtggcaaaatttgatttctacgtccaaattttgttaattttatc 3043512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 25100565 - 25100726
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgta--gacgtgttaagaacattacta 98  Q
    ||||||||||||||||||  || |||||||||||||||||||||  | || ||||||||||||| |||||| || ||  |||||||||||||||||||||    
T  25100565 cactcagtattagtctctcttcaattcaaatttgtttaatttattgt-aatctcttaagtttttgaacaatattttacagacgtgttaagaacattacta 25100663  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattactttta 161  Q
    |||||||||| |||||||||| |||| ||||||||||| || || |||||||| ||| |||||    
T  25100664 aaagttcctctgcaaaaaattgtcgctaaatttgatttttacgttcagattttgttaatttta 25100726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 75; E-Value: 9e-35
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 8738127 - 8737962
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgt--agacgtgttaagaacattacta 98  Q
    ||||||| ||||||| || ||| |||||||||||||||||||||||||||| |||| ||||||| ||||||||| |  ||||||||||| |||||||| |    
T  8738127 cactcagcattagtcccttctcgattcaaatttgtttaatttatgcttaaattcttgagtttttgaacaattttatacagacgtgttaaaaacattacga 8738028  T
Q  99 aaagttcctccgc-aaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    |||||| ||| || |||||||| |||||||||||||||| || ||||| ||||| ||| |||||||    
T  8738027 aaagtttctctgcaaaaaaattgtcgcaaaatttgatttctacgtccaaattttgttaattttatc 8737962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 24 - 163
Target Start/End: Complemental strand, 36512268 - 36512126
Alignment:
Q  24 attcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgta---gacgtgttaagaacattactaaaagttcctccgcaaaaaatta 120  Q
    |||| |||||||||||||||||||||||||||| ||||||| ||||||||| |    ||||||||||||| ||||||||||||| ||| | ||||||||     
T  36512268 attctaatttgtttaatttatgcttaaactcttgagtttttgaacaattttttgcaggacgtgttaagaatattactaaaagtttctctgtaaaaaattg 36512169  T
Q  121 tcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    |||||||||||||||| ||  |||||||||||||| |||||||    
T  36512168 tcgcaaaatttgatttttacatccagattttattaattttatc 36512126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 20701236 - 20701330
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaa--ttttgtagacgtgttaagaacat 93  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||  |||||||||||| ||||||||||    
T  20701236 cactcagtattagtctctgctcaattcaaatttgtttaatttatgcttaaacttttaagttttttaacaattttttgtagacgtattaagaacat 20701330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 24 - 163
Target Start/End: Original strand, 7439223 - 7439364
Alignment:
Q  24 attcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgta--gacgtgttaagaacattactaaaagttcctccgcaaaaaattat 121  Q
    |||||| ||| ||||||||||||||||||||||  |||||| ||||||||| ||  ||||||| |||||||||||||||||||||||  ||||||||| |    
T  7439223 attcaattttttttaatttatgcttaaactcttgtgtttttgaacaattttttactgacgtgtcaagaacattactaaaagttcctctacaaaaaattgt 7439322  T
Q  122 cgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    |||||||||| |||| || ||||||||||| ||| |||||||    
T  7439323 cgcaaaatttaatttctacgtccagattttgttaattttatc 7439364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 8 - 106
Target Start/End: Complemental strand, 21440127 - 21440027
Alignment:
Q  8 tattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaa--ttttgtagacgtgttaagaacattactaaaagttc 105  Q
    ||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| |||||  |||||||  ||||||||||||||||||||||||||    
T  21440127 tattagtctctgctcaattcaaatttgtttaatttattcttaaactcttaagtttttaaacaattttttgtaatcgtgttaagaacattactaaaagttc 21440028  T
Q  106 c 106  Q
    |    
T  21440027 c 21440027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 6457249 - 6457410
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgt--agacgtgttaagaacattacta 98  Q
    ||||||||||||||   | ||| |||||||||||||||||||||| |||||||||| ||||||| ||||||||| |  ||||||||| ||||||||| ||    
T  6457249 cactcagtattagt---tcctcaattcaaatttgtttaatttatggttaaactcttgagtttttgaacaattttttgaagacgtgttgagaacattaata 6457345  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    |||| ||||| ||||||||   ||| |||||||||||| || ||||||||||| ||| |||||||    
T  6457346 aaagctcctctgcaaaaaaaattcgtaaaatttgatttctacgtccagattttgttaattttatc 6457410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 18672239 - 18672312
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttt 74  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  18672239 cactcagtattagtctctgctcaattcaaatttgtttaatttatgcttgaactcttaagttttttaacaatttt 18672312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 4 - 84
Target Start/End: Complemental strand, 23787855 - 23787773
Alignment:
Q  4 tcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaa--ttttgtagacgtgt 84  Q
    |||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  23787855 tcagtattagtccctgctcaattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttttgtagacgtgt 23787773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 24 - 145
Target Start/End: Complemental strand, 14201259 - 14201135
Alignment:
Q  24 attcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttt--gtagacgtgttaagaacattactaaaagttcctccg--caaaaaatt 119  Q
    |||||||||||||||||| |||||||||||||||||||| | || ||||||  |||| |||||||||||||||||||||||||| ||||   ||||||||    
T  14201259 attcaaatttgtttaatt-atgcttaaactcttaagtttgtgaataattttttgtagccgtgttaagaacattactaaaagttcatccgtaaaaaaaatt 14201161  T
Q  120 atcgcaaaatttgatttatatgtcca 145  Q
    ||| ||||||||||||| || |||||    
T  14201160 atctcaaaatttgatttctacgtcca 14201135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 23 - 163
Target Start/End: Original strand, 31436040 - 31436182
Alignment:
Q  23 cattcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttt--gtagacgtgttaagaacattactaaaagttcctccgcaaaaaatta 120  Q
    |||| ||||||||||||||||||||||||||||| ||||||| |||||||||  | ||||||  |||||||| |||||||||||| ||  |||||||||     
T  31436040 catttaaatttgtttaatttatgcttaaactcttgagtttttgaacaatttttcgcagacgtactaagaacaatactaaaagttcatctacaaaaaattg 31436139  T
Q  121 tcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    | |||||||||||||| || || |||| ||| ||| |||||||    
T  31436140 ttgcaaaatttgatttctacgttcagaatttgttaattttatc 31436182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 37593190 - 37593027
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgt--agacgtgttaagaacattacta 98  Q
    ||||| ||||||||| || ||| |||||||||||||||||||||||||||| || | ||||||| ||||||||| |  ||  |||||||||| |||||||    
T  37593190 cactcggtattagtc-cttctcaattcaaatttgtttaatttatgcttaaattcctgagtttttgaacaattttttgcagctgtgttaagaatattacta 37593092  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    |||||||||  ||||||||||  |||||||||||| || || || || ||||| ||| |||||||    
T  37593091 aaagttcctttgcaaaaaattgccgcaaaatttgacttttacgttcaaattttgttaattttatc 37593027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 6 - 160
Target Start/End: Complemental strand, 34073880 - 34073727
Alignment:
Q  6 agtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgt--agacgtgttaagaacattactaaaagt 103  Q
    |||||||||  || ||| ||| ||||||||||| ||||||| |||||||||  |||||| ||||||||| |  |||| |||| |||||||||||||||||    
T  34073880 agtattagttcctactcaatttaaatttgttta-tttatgcctaaactctt--gtttttcaacaattttttgcagacatgtttagaacattactaaaagt 34073784  T
Q  104 tcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattactttt 160  Q
    ||||||  |||||||||||||||||||| |||| ||  |||| ||||| ||||||||    
T  34073783 tcctccataaaaaattatcgcaaaatttaatttctacatccatattttgttactttt 34073727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 32 - 151
Target Start/End: Complemental strand, 44879995 - 44879875
Alignment:
Q  32 ttgtttaatttatgcttaaactcttaagttttttaacaa--ttttgtagacgtgttaagaacattactaaaagttcctccgcaaaaaattatcgcaaaat 129  Q
    |||||||||||||||||||||| || ||||||| |||||  ||||| ||| ||||||||| ||||||||||||||  |  ||||||| || |||||||||    
T  44879995 ttgtttaatttatgcttaaacttttgagtttttaaacaattttttgcagatgtgttaagatcattactaaaagtttatgtgcaaaaatttgtcgcaaaat 44879896  T
Q  130 ttgatttatatgtccagatttt 151  Q
    ||||||| ||||||||||||||    
T  44879895 ttgattt-tatgtccagatttt 44879875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 33031065 - 33031165
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaa--ttttgtagacgtgttaagaacattacta 98  Q
    ||||||||||||||| || ||  |||||||||||||||||||||| |||||||||| | ||||| |||||  ||||| ||||||||||||||||||||||    
T  33031065 cactcagtattagtccctcctaaattcaaatttgtttaatttatgtttaaactcttgaatttttaaacaattttttgcagacgtgttaagaacattacta 33031164  T
Q  99 a 99  Q
    |    
T  33031165 a 33031165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 82 - 163
Target Start/End: Complemental strand, 40365116 - 40365035
Alignment:
Q  82 tgttaagaacattactaaaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    |||||||||||||||||||||||| || |||||||||| || |||||||||||||||| ||||| ||||| |||||||||||    
T  40365116 tgttaagaacattactaaaagttcatcggcaaaaaattgtcacaaaatttgatttatacgtccatattttgttacttttatc 40365035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 163
Target Start/End: Complemental strand, 44286994 - 44286831
Alignment:
Q  5 cagtattagtctctgctccattcaaatttgtttaatttatg---cttaaactcttaagttttttaacaattttgta--gacgtgttaagaacattactaa 99  Q
    |||| |||||| || ||| |||||||||||||||||||||    ||||||||||| ||||||| ||||||||| |   ||||||||||| ||||||||||    
T  44286994 cagttttagtccctcctcaattcaaatttgtttaatttataatacttaaactcttgagtttttgaacaattttttgcggacgtgttaagcacattactaa 44286895  T
Q  100 aagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    |||||| |    |||||||| |||| ||||||||||| || || |||||||| ||| |||||||    
T  44286894 aagttcatttaaaaaaaattgtcgctaaatttgatttctacgttcagattttgttaattttatc 44286831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 6 - 107
Target Start/End: Complemental strand, 4327915 - 4327815
Alignment:
Q  6 agtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgtagacgtgttaagaacattactaaaagttc 105  Q
    |||||||||| || ||  |||||||||||||||||||||||||||||| ||||| |||| ||||| |||| |||||| || ||||||||||||||| |||    
T  4327915 agtattagtccctacttaattcaaatttgtttaatttatgcttaaactattaagcttttgaacaa-tttgcagacgtatttagaacattactaaaaattc 4327817  T
Q  106 ct 107  Q
    ||    
T  4327816 ct 4327815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 21439299 - 21439349
Alignment:
Q  24 attcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttt 74  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  21439299 attcaaatttatttaatttatgcttaaactcttaagttttttaacaatttt 21439349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 73 - 163
Target Start/End: Complemental strand, 29809571 - 29809481
Alignment:
Q  73 ttgtagacgtgttaagaacattactaaaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    |||||||| |||||||||||||||||||||||| ||  ||||||||||||||||||| |||||| ||  |||| ||||| ||| |||||||    
T  29809571 ttgtagacttgttaagaacattactaaaagttcatctacaaaaaattatcgcaaaatctgatttctacatccaaattttgttaattttatc 29809481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 27 - 109
Target Start/End: Complemental strand, 8392616 - 8392532
Alignment:
Q  27 caaatttgtttaatttatgcttaaactcttaagttttttaacaattttgt--agacgtgttaagaacattactaaaagttcctcc 109  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| |  | ||||||||||||  ||| |||||||| ||||    
T  8392616 caaatttgtttaatttatgcttaaactcttaagtttttcaacaattttttacaaacgtgttaagaatgttattaaaagtttctcc 8392532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 42 - 136
Target Start/End: Complemental strand, 19058917 - 19058821
Alignment:
Q  42 tatgcttaaactcttaagttttttaacaatttt--gtagacgtgttaagaacattactaaaagttcctccgcaaaaaattatcgcaaaatttgattt 136  Q
    ||||||||||||||||||| ||| |||||||||  ||||| ||||||| ||||||| |||||  | ||||||||||||||| | |||||||||||||    
T  19058917 tatgcttaaactcttaagtgtttaaacaatttttcgtagatgtgttaaaaacattattaaaaaattctccgcaaaaaattagctcaaaatttgattt 19058821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 20720865 - 20720810
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactctt 56  Q
    |||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||    
T  20720865 cactcagtattagtctctgctcaattcaaatttgttcaatttatgtttaaactctt 20720810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 9111990 - 9111859
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaa--ttttgtagacgtgttaagaacattacta 98  Q
    |||||||| ||||||||||||  ||  |||||||||||||| ||||||||||| |||||  |||||||||  ||||| | | || |||||||||| || |    
T  9111990 cactcagttttagtctctgctaaatctaaatttgtttaatt-atgcttaaacttttaagacttttaacaagtttttgcacaagtattaagaacatcacga 9111892  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaattt 131  Q
    ||||||  || ||||||||||||| ||||||||    
T  9111891 aaagtttatctgcaaaaaattatctcaaaattt 9111859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 109
Target Start/End: Complemental strand, 13027735 - 13027653
Alignment:
Q  28 aaatttgtttaatttatgcttaaactcttaagttttttaacaattttgtagac--gtgttaagaacattactaaaagttcctcc 109  Q
    |||||||||||||| |||||||||| ||||||||||| ||||||||| || ||   ||||||||||||||||| ||||||||||    
T  13027735 aaatttgtttaatt-atgcttaaacacttaagtttttgaacaattttttatacatttgttaagaacattactataagttcctcc 13027653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 18673124 - 18673072
Alignment:
Q  4 tcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactctt 56  Q
    ||||||||||| ||||||| ||||||||||||| |||||||||||||||||||    
T  18673124 tcagtattagtatctgctcaattcaaatttgttcaatttatgcttaaactctt 18673072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 151
Target Start/End: Original strand, 32318223 - 32318348
Alignment:
Q  28 aaatttgtttaatttatgcttaaactcttaagttttttaacaattttgtag---acgtgttaagaacattactaaaagttcctccgcaaaaaattatcgc 124  Q
    |||||||||||||| ||||||||||| ||||| |||| ||||||||| | |   | |||||||||||||||| |||||||| || |||||  |||||| |    
T  32318223 aaatttgtttaatt-atgcttaaacttttaagattttgaacaatttttttgcacaagtgttaagaacattacgaaaagttcatctgcaaatgattatctc 32318321  T
Q  125 aaaatttgatttatatgtccagatttt 151  Q
    ||||||| |||| |  |||||||||||    
T  32318322 aaaattttatttctgcgtccagatttt 32318348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 28 - 136
Target Start/End: Original strand, 9111576 - 9111685
Alignment:
Q  28 aaatttgtttaatttatgcttaaactcttaagttttttaacaa--ttttgtagacgtgttaagaacattactaaaagttcctccgcaaaaaattatcgca 125  Q
    |||||||||||||| ||||||||||| ||||| |||  |||||  ||||| | | |||||||||||||||| |||||||| ||  |||||||||||| ||    
T  9111576 aaatttgtttaatt-atgcttaaacttttaagatttagaacaactttttgcacaagtgttaagaacattacgaaaagttcatctacaaaaaattatctca 9111674  T
Q  126 aaatttgattt 136  Q
    |||||| ||||    
T  9111675 aaattttattt 9111685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 44493811 - 44493760
Alignment:
Q  5 cagtattagtctctgctccattcaaatttgtttaatttatgcttaaactctt 56  Q
    |||||||| ||||||||| ||||||||||||| |||||||||||||||||||    
T  44493811 cagtattaatctctgctcaattcaaatttgttcaatttatgcttaaactctt 44493760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 155 - 193
Target Start/End: Original strand, 20720097 - 20720135
Alignment:
Q  155 acttttatcgttttcaaaaattcatatttaattcatttc 193  Q
    |||||||||||||||||||||||||||||||||||||||    
T  20720097 acttttatcgttttcaaaaattcatatttaattcatttc 20720135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 139
Target Start/End: Original strand, 23496580 - 23496679
Alignment:
Q  43 atgcttaaactcttaagttttttaacaatttt---gtagacgtgttaagaacattactaaaagttcctccgcaaaaaattatcgcaaaatttgatttata 139  Q
    |||||||||||||| ||||||| |||||||||   |||||||| ||   |||||||| ||||||| ||||||||||||||| |   ||||||||||||||    
T  23496580 atgcttaaactcttgagtttttaaacaattttttcgtagacgtattggaaacattaccaaaagtttctccgcaaaaaattagcttgaaatttgatttata 23496679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 13372236 - 13372184
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaact 53  Q
    ||||||||||||||| || ||| ||| ||||||||||||||||||||||||||    
T  13372236 cactcagtattagtccctcctcaattaaaatttgtttaatttatgcttaaact 13372184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 7655027 - 7654964
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttt 64  Q
    |||||| |||||||| || ||| ||| |||||||||||||||||| |||||||||| |||||||    
T  7655027 cactcaatattagtcccttctcaatttaaatttgtttaatttatggttaaactcttgagttttt 7654964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 163
Target Start/End: Complemental strand, 20721419 - 20721380
Alignment:
Q  124 caaaatttgatttatatgtccagattttattacttttatc 163  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  20721419 caaaatttgatttatatgtccatattttattacttttatc 20721380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 42487033 - 42487088
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactctt 56  Q
    ||||||||||||||| | | || ||||||||||||| |||||||||||||||||||    
T  42487033 cactcagtattagtcccagttcaattcaaatttgttcaatttatgcttaaactctt 42487088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 43932123 - 43932178
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactctt 56  Q
    ||||||||||||||| || ||| |||| |||||||| |||||||||||||||||||    
T  43932123 cactcagtattagtccctactcaattccaatttgttcaatttatgcttaaactctt 43932178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 125 - 163
Target Start/End: Complemental strand, 21440021 - 21439983
Alignment:
Q  125 aaaatttgatttatatgtccagattttattacttttatc 163  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  21440021 aaaatttgatttatatgtccatattttattacttttatc 21439983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 28 - 136
Target Start/End: Original strand, 3117981 - 3118090
Alignment:
Q  28 aaatttgtttaatttatgcttaaactcttaagttttttaacaattt--tgtagacgtgttaagaacattactaaaagttcctccgcaaaaaattatcgca 125  Q
    |||||||||||||| ||| ||||||| ||||| |||| ||||| ||  || | |  ||||||||||||||| |||||||| || ||||||||| ||| ||    
T  3117981 aaatttgtttaatt-atgtttaaacttttaagattttgaacaaattattgcacaaatgttaagaacattacgaaaagttcatctgcaaaaaataatctca 3118079  T
Q  126 aaatttgattt 136  Q
    |||||| ||||    
T  3118080 aaattttattt 3118090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 24 - 92
Target Start/End: Original strand, 24951216 - 24951285
Alignment:
Q  24 attcaaatttgtttaatttatgcttaaactcttaagttttttaaca--attttgtagacgtgttaagaaca 92  Q
    |||||||||||||||||| ||||||||||||| |||||||  ||||   ||||| ||||||||||||||||    
T  24951216 attcaaatttgtttaatt-atgcttaaactctcaagttttcgaacattcttttggagacgtgttaagaaca 24951285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 162 - 193
Target Start/End: Original strand, 31771472 - 31771503
Alignment:
Q  162 tcgttttcaaaaattcatatttaattcatttc 193  Q
    ||||||||||||||||||||||||||||||||    
T  31771472 tcgttttcaaaaattcatatttaattcatttc 31771503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 28 - 128
Target Start/End: Complemental strand, 32319232 - 32319131
Alignment:
Q  28 aaatttgtttaatttatgcttaaactcttaagttttttaacaa--ttttgtagacgtgttaagaacattactaaaagttcctccgcaaaaaattatcgca 125  Q
    |||||||||||||| ||||||||||| ||||| |||| |||||  ||||| | | ||||||||||||| |  |||||||  || ||||||||||||| ||    
T  32319232 aaatttgtttaatt-atgcttaaacttttaagattttgaacaattttttgcacaagtgttaagaacatcatgaaaagtttatctgcaaaaaattatctca 32319134  T
Q  126 aaa 128  Q
    |||    
T  32319133 aaa 32319131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 193
Target Start/End: Original strand, 18672342 - 18672378
Alignment:
Q  157 ttttatcgttttcaaaaattcatatttaattcatttc 193  Q
    ||||||||| |||||||||||||||||||||| ||||    
T  18672342 ttttatcgtcttcaaaaattcatatttaattcgtttc 18672378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 130; Significance: 1e-67; HSPs: 44)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 130; E-Value: 1e-67
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 5079822 - 5079658
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttt--gtagacgtgttaagaacattacta 98  Q
    |||| |||||||||| || ||| |||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  5079822 cacttagtattagtcccttctcaattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttttgtagacgtgttaagaacattacta 5079723  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    |||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  5079722 aaagttcctccgcaaaaagttattgcaaaatttgatttatatgtccagattttattacttttatc 5079658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 938824 - 938988
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgt--agacgtgttaagaacattacta 98  Q
    ||||||||||||||| || | | ||||||||||||||||||||||||||||||||| ||||||| ||||||||| |  | ||||||||||||||||||||    
T  938824 cactcagtattagtccctacccaattcaaatttgtttaatttatgcttaaactcttgagtttttgaacaattttttgcaaacgtgttaagaacattacta 938923  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    ||||||||||||||| ||||||||||||||||||| || || ||||||| ||| || ||||||||    
T  938924 aaagttcctccgcaataaattatcgcaaaatttgaattctacgtccagactttgttgcttttatc 938988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 3 - 193
Target Start/End: Complemental strand, 14256458 - 14256258
Alignment:
Q  3 ctcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagtttttt-aacaatttt--gtagacgtgttaagaacattactaa 99  Q
    ||||||||||||  || ||| |||||||||| |||||||||||||||||||||| |||||||| |||||||||  |||||| |||||| |||||||||||    
T  14256458 ctcagtattagttcctactcaattcaaatttatttaatttatgcttaaactcttgagtttttttaacaatttttggtagacatgttaaaaacattactaa 14256359  T
Q  100 aagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattactttta-------tcgttttcaaaaattcatatttaattcattt 192  Q
    ||||||||| |||||||||| ||||||||||||||||  | ||||| ||||| |||||||||       ||||||| ||||||||||||||||||| |||    
T  14256358 aagttcctctgcaaaaaattgtcgcaaaatttgatttcaacgtccaaattttgttacttttaacttttgtcgttttgaaaaattcatatttaattctttt 14256259  T
Q  193 c 193  Q
    |    
T  14256258 c 14256258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 15721380 - 15721216
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgta--gacgtgttaagaacattacta 98  Q
    |||||||||||| || || ||| |||||||||||||||||||||| |||||||||| ||||||| ||||||||| ||  |||||||||| ||| ||||||    
T  15721380 cactcagtattaatccctcctcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacagacgtgttaaaaactttacta 15721281  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    |||||||||  |||||||||| |||||||||||||||| || ||||||||||| ||| |||||||    
T  15721280 aaagttcctatgcaaaaaattgtcgcaaaatttgatttctacgtccagattttgttaattttatc 15721216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 3 - 163
Target Start/End: Complemental strand, 29692224 - 29692062
Alignment:
Q  3 ctcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaa--ttttgtagacgtgttaagaacattactaaa 100  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||||||||| ||||||| |||||  |||||||||||||||||  | ||||| |||    
T  29692224 ctcagtattagtctctgcgcaattcaaatttgtttaatttatgcttaaactcttgagtttttcaacaattttttgtagacgtgttaaacatattacaaaa 29692125  T
Q  101 agttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    |||||||| |||||||||| || |||||||||||||  | ||||| ||||| |||||| ||||    
T  29692124 agttcctctgcaaaaaattctcacaaaatttgatttcaacgtccatattttgttacttatatc 29692062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 7 - 163
Target Start/End: Complemental strand, 33518665 - 33518507
Alignment:
Q  7 gtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgt--agacgtgttaagaacattactaaaagtt 104  Q
    |||||||||||| ||||||||||||||||||||| |||||||| |||||| ||||||| ||||||||| |  ||||||||||| ||||||||||||||||    
T  33518665 gtattagtctctcctccattcaaatttgtttaatgtatgcttatactcttgagtttttgaacaattttttgcagacgtgttaaaaacattactaaaagtt 33518566  T
Q  105 cctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    | || |||||||||| || ||||||||||||| || ||||| ||||| ||| |||||||    
T  33518565 catctgcaaaaaattgtcacaaaatttgatttctacgtccaaattttgttaattttatc 33518507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 8 - 115
Target Start/End: Complemental strand, 18503287 - 18503178
Alignment:
Q  8 tattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaa--ttttgtagacgtgttaagaacattactaaaagttc 105  Q
    ||||||||||||||| |||||||||| |||||||||| |||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  18503287 tattagtctctgctcaattcaaatttctttaatttattcttaaactcttaagttttttaacaattttttgtagacgtgttaagaacattactaaaagttc 18503188  T
Q  106 ctccgcaaaa 115  Q
    | ||||||||    
T  18503187 cgccgcaaaa 18503178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 5974624 - 5974460
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgt--agacgtgttaagaacattacta 98  Q
    |||||||||||||||  | ||| ||| ||||||||||||||||||||||||||||| ||||||| ||||||||| |  ||||||||||| ||||||||||    
T  5974624 cactcagtattagtccttcctcaatttaaatttgtttaatttatgcttaaactcttgagtttttgaacaattttttgcagacgtgttaaaaacattacta 5974525  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    ||||||||||  ||||||||| |||||||||||||||| ||  |||| ||||| ||| |||||||    
T  5974524 aaagttcctctacaaaaaattgtcgcaaaatttgatttctacatccaaattttgttaattttatc 5974460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 10915281 - 10915447
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaa----ttttgtagacgtgttaagaacattac 96  Q
    ||||||||||||||| || ||| ||||||||||||||||||||||||||||||||| ||||||| |||||    ||||| ||||||||||||||||||||    
T  10915281 cactcagtattagtccctcctcaattcaaatttgtttaatttatgcttaaactcttgagtttttgaacaattttttttgcagacgtgttaagaacattac 10915380  T
Q  97 taaaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    |||||| ||||   ||||||||| ||||| |||||||||| || ||||| ||||| ||| |||||||    
T  10915381 taaaaggtcctttacaaaaaattgtcgcataatttgatttctacgtccatattttgttaattttatc 10915447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 9 - 163
Target Start/End: Original strand, 30660766 - 30660922
Alignment:
Q  9 attagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgt--agacgtgttaagaacattactaaaagttcc 106  Q
    |||||||||| ||| ||| ||||||||||||||||||||||||||||| ||||||| ||||||||| |  |||| ||||||||| ||||||||||||||     
T  30660766 attagtctctcctcaatttaaatttgtttaatttatgcttaaactcttgagtttttgaacaattttttgcagacatgttaagaatattactaaaagttca 30660865  T
Q  107 tccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    || |||||||||| |||||||||||||||| ||  |||||||||| ||| |||||||    
T  30660866 tctgcaaaaaattgtcgcaaaatttgatttctacatccagattttgttaattttatc 30660922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 6 - 160
Target Start/End: Complemental strand, 861670 - 861513
Alignment:
Q  6 agtattagtctctgctccattcaaatttgtttaatttatgctt-aaactcttaagttttttaacaattttgt--agacgtgttaagaacattactaaaag 102  Q
    |||||||||| || ||| |||||||| || ||||||||||||| |||||||||||||||| ||||||||| |  |||| | || ||||||||||||||||    
T  861670 agtattagtccctactcaattcaaatatgcttaatttatgctttaaactcttaagtttttgaacaattttttgcagacatatttagaacattactaaaag 861571  T
Q  103 ttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattactttt 160  Q
    |||||| ||||||||||||||||||||||||||| ||  |||||||||| ||||||||    
T  861570 ttcctcggcaaaaaattatcgcaaaatttgatttctacatccagattttgttactttt 861513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 4 - 163
Target Start/End: Original strand, 8709819 - 8709979
Alignment:
Q  4 tcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgt--agacgtgttaagaacattactaaaa 101  Q
    |||||||||||| || ||| ||| ||||||||||||||||||||||||||||| ||||||  ||||||||| |  |||||||||||||| ||||||||||    
T  8709819 tcagtattagtccctcctcaatttaaatttgtttaatttatgcttaaactcttgagttttg-aacaattttttgcagacgtgttaagaatattactaaaa 8709917  T
Q  102 gttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    |||||||  ||||||||| |||||||||||||||| || ||||| ||||| ||| |||||||    
T  8709918 gttcctctacaaaaaattgtcgcaaaatttgatttctacgtccaaattttgttaattttatc 8709979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 6 - 160
Target Start/End: Original strand, 844091 - 844247
Alignment:
Q  6 agtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaa--ttttgtagacgtgttaagaacattactaaaagt 103  Q
    |||||||||| || ||| ||||||| ||| |||||||||| |||||||||||||||||| |||||  ||||| |||| | || |||||||||||||||||    
T  844091 agtattagtccctactcaattcaaacttgcttaatttatgtttaaactcttaagtttttgaacaactttttgcagacatatttagaacattactaaaagt 844190  T
Q  104 tcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattactttt 160  Q
    ||||| ||||||||||||||||||||||||||| ||  | |||||||| ||||||||    
T  844191 tcctctgcaaaaaattatcgcaaaatttgatttctacattcagattttgttactttt 844247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 2087418 - 2087581
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgta--gacgtgttaagaacattacta 98  Q
    |||||||||||||||  | ||| |||||||||||||||||||||||||||||||||| |||||| ||||| ||| ||  ||| |||||||||||||||||    
T  2087418 cactcagtattagtccttcctcaattcaaatttgtttaatttatgcttaaactctta-gtttttgaacaaatttttacagacatgttaagaacattacta 2087516  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    ||||||| || |||||||||| ||  |||||||||||| || ||||||||||| ||| |||||||    
T  2087517 aaagttcatctgcaaaaaattgtcataaaatttgatttctacgtccagattttgttaattttatc 2087581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 22732313 - 22732150
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgt-agacgtgttaagaacattactaa 99  Q
    |||||| |||||||| || ||| ||||||||||||||||  ||||||||||||||| ||||||| |||||||||   | |||| ||||||||||||||||    
T  22732313 cactcaatattagtccctcctcaattcaaatttgtttaaactatgcttaaactcttgagtttttaaacaatttttacatacgtattaagaacattactaa 22732214  T
Q  100 aagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    ||||||||| |||||||||| |||||||||||||||| || | ||||| ||| ||| |||||||    
T  22732213 aagttcctctgcaaaaaattgtcgcaaaatttgatttctacggccagactttgttaattttatc 22732150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 26356508 - 26356675
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgt-----agacgtgttaagaacatta 95  Q
    ||||||||||||||| || ||| |||||||||||||||||||||| |||||||||| ||||||| ||||||||| |     |  ||||||||||||||||    
T  26356508 cactcagtattagtccctcctcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaatttttttttacacgcgtgttaagaacatta 26356607  T
Q  96 ctaaaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    ||||||||| ||  |||||||||| || ||||||||||||| || ||||||||||| ||| |||||||    
T  26356608 ctaaaagtttctatgcaaaaaattgtcacaaaatttgatttctacgtccagattttgttaattttatc 26356675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 75; E-Value: 9e-35
Query Start/End: Original strand, 24 - 163
Target Start/End: Complemental strand, 5087482 - 5087341
Alignment:
Q  24 attcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttt--gtagacgtgttaagaacattactaaaagttcctccgcaaaaaattat 121  Q
    |||||||| |||||||||||||||||||||||| | ||||| |||||||||  |||||||||||||||||||||||||||||||||| |||||||||| |    
T  5087482 attcaaatatgtttaatttatgcttaaactcttgactttttgaacaattttttgtagacgtgttaagaacattactaaaagttcctctgcaaaaaattgt 5087383  T
Q  122 cgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    ||||||| || |||| ||  | |||||||| ||| |||||||    
T  5087382 cgcaaaaattaatttttacattcagattttgttaattttatc 5087341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 75; E-Value: 9e-35
Query Start/End: Original strand, 8 - 115
Target Start/End: Original strand, 17244527 - 17244636
Alignment:
Q  8 tattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaa--ttttgtagacgtgttaagaacattactaaaagttc 105  Q
    ||||||||||||||| |||||||| |||||||||||| |||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||||| |    
T  17244527 tattagtctctgctcaattcaaatatgtttaatttattcttaaactcttaagttttttaacaattttttgtagatgtgttaagaacattactaaaagtcc 17244626  T
Q  106 ctccgcaaaa 115  Q
    | ||||||||    
T  17244627 cgccgcaaaa 17244636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 3 - 153
Target Start/End: Complemental strand, 20898293 - 20898141
Alignment:
Q  3 ctcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgt--agacgtgttaagaacattactaaa 100  Q
    ||||||||||||   ||||| |||||||||| |||||||||||||||||||||||||||||| ||||||||| |  |||| | |||||||||||||||||    
T  20898293 ctcagtattagttcatgctcaattcaaatttttttaatttatgcttaaactcttaagtttttgaacaatttttttaagacttcttaagaacattactaaa 20898194  T
Q  101 agttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttat 153  Q
    | |||||||| ||||||  ||| ||||||||||||| || ||||| |||||||    
T  20898193 acttcctccgaaaaaaaaaatcacaaaatttgatttctacgtccaaattttat 20898141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 2 - 163
Target Start/End: Complemental strand, 17697700 - 17697537
Alignment:
Q  2 actcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgt--agacgtgttaagaacattactaa 99  Q
    |||||||||||||| || ||  | ||||||||||||||||||||||||||||| | ||||||| ||||||||| |  |||||||||||||||||||| ||    
T  17697700 actcagtattagtccctccttaagtcaaatttgtttaatttatgcttaaactcgtgagtttttgaacaattttttgaagacgtgttaagaacattacaaa 17697601  T
Q  100 aagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    ||| ||||   || |||||| ||| |||||||||||| || ||||||||||| ||| |||||||    
T  17697600 aagctccttttcataaaattgtcgtaaaatttgatttctacgtccagattttgttaattttatc 17697537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 4 - 151
Target Start/End: Original strand, 1820966 - 1821113
Alignment:
Q  4 tcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgt--agacgtgttaagaacattactaaaa 101  Q
    |||||||||||| || ||| ||||||||||||||  ||||||||||||||||| ||||||| ||||||||| |  | |||| ||||||||||||||||||    
T  1820966 tcagtattagtccctcctcaattcaaatttgttt--tttatgcttaaactcttgagtttttgaacaattttttgcatacgtattaagaacattactaaaa 1821063  T
Q  102 gttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagatttt 151  Q
    ||||||| ||||||| || || ||||||||||||| || ||||| |||||    
T  1821064 gttcctctgcaaaaagttgtcacaaaatttgatttctacgtccaaatttt 1821113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 27 - 163
Target Start/End: Complemental strand, 33744952 - 33744813
Alignment:
Q  27 caaatttgtttaatttatgcttaaactcttaagttttttaacaa--ttttgtagacgtgttaagaacattactaaaagttcctccgcaaaaaattatcgc 124  Q
    |||||||||||||||||||||||||||||||||||||| |||||  ||||  ||||||||||||||| ||| |||||| ||||||| |||||| ||||||    
T  33744952 caaatttgtttaatttatgcttaaactcttaagtttttcaacaatgttttacagacgtgttaagaacgttattaaaaggtcctccg-aaaaaaatatcgc 33744854  T
Q  125 -aaaatttgatttatatgtccaga-ttttattacttttatc 163  Q
     |||||||||||| || ||||| | ||||||||||| ||||    
T  33744853 aaaaatttgatttctacgtccatatttttattacttatatc 33744813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 20510471 - 20510623
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgtagacgtgttaagaacattactaaa 100  Q
    |||||| |||||||| || ||| ||||||||||||||| ||||||||||||||||| |||||||          | ||| ||||||||||||||||||||    
T  20510471 cactcaatattagtccctcctcaattcaaatttgtttattttatgcttaaactcttgagttttt----------gcagatgtgttaagaacattactaaa 20510560  T
Q  101 agttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    ||||||||  ||||||||| ||| ||||||| |||| || ||||||||||| ||| |||||||    
T  20510561 agttcctctacaaaaaattgtcgtaaaatttaatttctacgtccagattttgttaattttatc 20510623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 17246396 - 17246323
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttt 74  Q
    ||||| |||||||||  ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17246396 cactcggtattagtccttgctcaattcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttt 17246323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 4 - 163
Target Start/End: Complemental strand, 28476503 - 28476342
Alignment:
Q  4 tcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttt---gtagacgtgttaagaacattactaaa 100  Q
    ||||||||||||||||||| ||| |||||||||||||||||| ||||||| || ||||||| |||||||||   ||||| || ||||  | |||||||||    
T  28476503 tcagtattagtctctgctcaatttaaatttgtttaatttatgtttaaacttttgagtttttcaacaattttttggtagatgtattaaacatattactaaa 28476404  T
Q  101 agttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
     ||| ||| | |||||||| || |||||||||||||  | ||||| ||||| |||||| ||||    
T  28476403 tgtttctctg-aaaaaattgtcacaaaatttgatttcaacgtccatattttgttacttatatc 28476342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 24 - 151
Target Start/End: Original strand, 30492725 - 30492841
Alignment:
Q  24 attcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgtagacgtgttaagaacattactaaaagttcctccgcaaaaaattatcg 123  Q
    |||||||| |||||||||||||||||||||||| |||||||| |          ||||||||||||||||||||||||||||||| || ||||||| |||    
T  30492725 attcaaatctgtttaatttatgcttaaactcttgagttttttca----------gacgtgttaagaacattactaaaagttcctctgctaaaaattgtcg 30492814  T
Q  124 caaaatttgatttatatgtccagatttt 151  Q
    |||||||| |||| || |||||||||||    
T  30492815 caaaattt-atttctacgtccagatttt 30492841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 74
Target Start/End: Original strand, 5078981 - 5079051
Alignment:
Q  4 tcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttt 74  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||| |  ||||||||||||||    
T  5078981 tcagtattagtctctgctgaattcaaatttgtttaatttatgcttaaactctttaagtttttaacaatttt 5079051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 11400384 - 11400318
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaa 67  Q
    ||||||||||||||| || ||| |||||||||||||||||||||| |||||||||| ||||||||||    
T  11400384 cactcagtattagtccctcctcaattcaaatttgtttaatttatgattaaactcttgagttttttaa 11400318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 3335479 - 3335412
Alignment:
Q  4 tcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaat 71  Q
    |||||||||||| |||||| |||||||||| ||| |||||||||||||||||||| ||||||| ||||    
T  3335479 tcagtattagtccctgctcaattcaaatttattttatttatgcttaaactcttaaattttttaccaat 3335412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 151
Target Start/End: Original strand, 289005 - 289129
Alignment:
Q  28 aaatttgtttaatttatgcttaaactcttaagttttttaacaattttgtagac--gtgttaagaacattactaaaagttcctccgcaaaaaattatcgca 125  Q
    |||||||||||||| ||||||||||  ||||| |||| ||||||||| |  ||  |||||||||||||||| |||| ||| || ||||||||||||| ||    
T  289005 aaatttgtttaatt-atgcttaaacatttaagattttgaacaattttttgcacaagtgttaagaacattacgaaaacttcatctgcaaaaaattatctca 289103  T
Q  126 aaatttgatttatatgtccagatttt 151  Q
    |||||| |||| |  |||||||||||    
T  289104 aaattttatttctgcgtccagatttt 289129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 163
Target Start/End: Original strand, 12481806 - 12481898
Alignment:
Q  71 ttttgtagacgtgttaagaacattactaaaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    ||||| |||||||||||| ||| |||||||| |||| |  ||||||||| |||||||||||||||| || |||| |||||| ||| |||||||    
T  12481806 ttttgcagacgtgttaagcacaatactaaaaattccgctacaaaaaattgtcgcaaaatttgatttctacgtcctgattttgttaattttatc 12481898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 28 - 150
Target Start/End: Complemental strand, 3914709 - 3914587
Alignment:
Q  28 aaatttgtttaatttatgcttaaactcttaagttttttaacaatttt-gtagacgtgttaagaacattactaaaagttcctccgcaaaaaattatcgcaa 126  Q
    |||||||||||||| ||| ||||||| ||||| |||| || |||||| | | | |||||||||||||||| ||| |||| || ||||||||||||| |||    
T  3914709 aaatttgtttaatt-atgtttaaacttttaagattttgaataatttttgcacaagtgttaagaacattacaaaatgttcatctgcaaaaaattatctcaa 3914611  T
Q  127 aatttgatttatatgtccagattt 150  Q
    ||||| |||| || ||| ||||||    
T  3914610 aattttatttctacgtctagattt 3914587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 22972103 - 22972048
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactctt 56  Q
    ||||| |||||||||| ||||| ||||||||||||| |||||||||||||||||||    
T  22972103 cactcggtattagtctatgctcaattcaaatttgttcaatttatgcttaaactctt 22972048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 23816295 - 23816350
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactctt 56  Q
    ||||| |||||||||| ||||| ||||||||||||| |||||||||||||||||||    
T  23816295 cactcggtattagtctatgctcaattcaaatttgttcaatttatgcttaaactctt 23816350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 28 - 151
Target Start/End: Complemental strand, 289647 - 289523
Alignment:
Q  28 aaatttgtttaatttatgcttaaactcttaagttttttaacaattttgtagac--gtgttaagaacattactaaaagttcctccgcaaaaaattatcgca 125  Q
    |||||||||||||| ||||||||||| ||||| |||| ||||||||| |  ||  ||||||||||||| |  |||||||  || |||||||||||||  |    
T  289647 aaatttgtttaatt-atgcttaaacttttaagattttgaacaattttttgcacaagtgttaagaacatcatgaaaagtttatctgcaaaaaattatctta 289549  T
Q  126 aaatttgatttatatgtccagatttt 151  Q
    |||||| |||| || |||||||||||    
T  289548 aaattttatttctacgtccagatttt 289523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 28 - 151
Target Start/End: Complemental strand, 21108355 - 21108231
Alignment:
Q  28 aaatttgtttaatttatgcttaaactcttaagttttttaacaattttgtagac--gtgttaagaacattactaaaagttcctccgcaaaaaattatcgca 125  Q
    |||||||||||||| ||||||||||| ||||| |||| ||||||||| |  ||  |||||||||||||||| |||| ||| ||  ||||||| |||| ||    
T  21108355 aaatttgtttaatt-atgcttaaacttttaagattttgaacaattttttgcacaagtgttaagaacattacgaaaatttcatctccaaaaaaatatctca 21108257  T
Q  126 aaatttgatttatatgtccagatttt 151  Q
    |||||| |||| |  |||||||||||    
T  21108256 aaattttatttctgcgtccagatttt 21108231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 122 - 163
Target Start/End: Complemental strand, 18503184 - 18503143
Alignment:
Q  122 cgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  18503184 cgcaaaatttgatttatatgtccatattttattacttttatc 18503143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 132
Target Start/End: Complemental strand, 17467721 - 17467666
Alignment:
Q  77 agacgtgttaagaacattactaaaagttcctccgcaaaaaattatcgcaaaatttg 132  Q
    ||||||||||| ||| |||||||||||| ||| ||||||||||||| |||||||||    
T  17467721 agacgtgttaaaaacgttactaaaagtttctctgcaaaaaattatctcaaaatttg 17467666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 3375270 - 3375421
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttt--gtagacgtgttaagaacattacta 98  Q
    ||||||||||||||| || ||  ||  |||||||||||||| || |||||| | ||||| |||| ||  |||||  ||| | |||||||||||||||||     
T  3375270 cactcagtattagtccctactaaatctaaatttgtttaatt-atacttaaaattttaagattttgaaggattttttgtaaaagtgttaagaacattactt 3375368  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagatttt 151  Q
    ||| |||  | ||||||||||||| |||||||| |||| || || ||||||||    
T  3375369 aaatttcacctgcaaaaaattatctcaaaattttatttctacgttcagatttt 3375421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 25839672 - 25839635
Alignment:
Q  25 ttcaaatttgtttaatttatgcttaaactcttaagttt 62  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  25839672 ttcaaatttgtttaatttatgcttaaactattaagttt 25839635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 22971876 - 22971914
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaa 39  Q
    |||||||||||||||| ||||| ||||||||||||||||    
T  22971876 cactcagtattagtctttgctcaattcaaatttgtttaa 22971914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 23816522 - 23816484
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaa 39  Q
    |||||||||||||||| ||||| ||||||||||||||||    
T  23816522 cactcagtattagtctttgctcaattcaaatttgtttaa 23816484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 155 - 188
Target Start/End: Original strand, 2087586 - 2087619
Alignment:
Q  155 acttttatcgttttcaaaaattcatatttaattc 188  Q
    |||||||||||||| |||||||||||||||||||    
T  2087586 acttttatcgttttaaaaaattcatatttaattc 2087619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 70 - 151
Target Start/End: Complemental strand, 30916949 - 30916868
Alignment:
Q  70 attttgtagacgtgttaagaacattactaaaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagatttt 151  Q
    ||||||||||  ||||||||| ||||||||||||| ||| ||||| || || |  ||||||| |||| |||||| |||||||    
T  30916949 attttgtagatttgttaagaatattactaaaagttactctgcaaacaaatagcttaaaatttaatttttatgtcaagatttt 30916868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 127; Significance: 9e-66; HSPs: 3)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 35255 - 35417
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttt--gtagacgtgttaagaacattacta 98  Q
    ||||||||||||||| ||  || |||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||    
T  35255 cactcagtattagtccct--tcaattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttttgtagacgtgttaagaacattagta 35352  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  35353 aaagttcctccgcaaaaaattattgcaaaatttgatttatatgtccagattttattacttttatc 35417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148; HSP #2
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 4 - 84
Target Start/End: Complemental strand, 38691 - 38609
Alignment:
Q  4 tcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaa--ttttgtagacgtgt 84  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||    
T  38691 tcagtattagtctctgctcaattcaaatttgtttaatttatgcttgaactcttaagttttttaacaattttttgtagacgtgt 38609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 193
Target Start/End: Original strand, 35422 - 35460
Alignment:
Q  155 acttttatcgttttcaaaaattcatatttaattcatttc 193  Q
    |||||||||||||||||||||| ||||||||||| ||||    
T  35422 acttttatcgttttcaaaaatttatatttaattcgtttc 35460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0651 (Bit Score: 114; Significance: 5e-58; HSPs: 2)
Name: scaffold0651
Description:

Target: scaffold0651; HSP #1
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 7178 - 7014
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttt--gtagacgtgttaagaacattacta 98  Q
    ||||||||||||||||||| |   || ||||||||||||||||||||||||||||| |||||||||||||||||  ||||||||||||| ||||||||||    
T  7178 cactcagtattagtctctgtttagtttaaatttgtttaatttatgcttaaactcttgagttttttaacaattttttgtagacgtgttaaaaacattacta 7079  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  7078 aaagttcctctgcaaaaaattatcgcaaaatttgatttatatgtccaaattttattatttttatc 7014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0651; HSP #2
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 5799 - 5854
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactctt 56  Q
    |||| |||||||||| |||||| ||||||||||||| |||||||||||||||||||    
T  5799 cacttagtattagtccctgctcaattcaaatttgttcaatttatgcttaaactctt 5854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 114; Significance: 5e-58; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 17691 - 17527
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttt--gtagacgtgttaagaacattacta 98  Q
    ||||||||||||||| |||||  |||||||||||||||||||||  |||||||||||||||||| |||||||||  ||||||||||||||||||||||||    
T  17691 cactcagtattagtccctgctgaattcaaatttgtttaatttatagttaaactcttaagtttttgaacaattttttgtagacgtgttaagaacattacta 17592  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    |||||||||||| |||||||||| |||||||||||||| || |||||||||||||||||||||||    
T  17591 aaagttcctccgtaaaaaattattgcaaaatttgatttttaagtccagattttattacttttatc 17527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 108; Significance: 2e-54; HSPs: 6)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 23184 - 23050
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaa--ttttgtagacgtgttaagaacattacta 98  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||  |||||| |||||||||||||||||||||    
T  23184 cactcagtattagtctctgctcaattcaaatttgtttaatttatgcttaaactcttaagttttctaacaattttttgttgacgtgttaagaacattacta 23085  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttga 133  Q
    ||||||||||||||||||| |||||||||||||||    
T  23084 aaagttcctccgcaaaaaactatcgcaaaatttga 23050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097; HSP #2
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 6 - 163
Target Start/End: Original strand, 23772 - 23930
Alignment:
Q  6 agtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgt---agacgtgttaagaacattactaaaag 102  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||||   |||||||||||||||||| |   ||||||||||||||||||||||||||    
T  23772 agtattagtctctactcaattcaaatttgtttaatttatgcttaaact---aagttttttaacaatttttttatagacgtgttaagaacattactaaaag 23868  T
Q  103 ttcctccgcaaaaaatta-tcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    ||||||||||||||| || |||||||||||||||||||||| ||||||||||||||||||||    
T  23869 ttcctccgcaaaaaaataatcgcaaaatttgatttatatgttcagattttattacttttatc 23930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097; HSP #3
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 8 - 115
Target Start/End: Complemental strand, 25352 - 25243
Alignment:
Q  8 tattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaa--ttttgtagacgtgttaagaacattactaaaagttc 105  Q
    ||||| ||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  25352 tattaatctctgctcaattcaaatttgtttaatttattcttaaactcttaagttttttaacaattttttgtagacgtgttaagaacattactaaaagttc 25253  T
Q  106 ctccgcaaaa 115  Q
    | || |||||    
T  25252 cgccacaaaa 25243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 24703 - 24648
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactctt 56  Q
    |||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||    
T  24703 cactcagtattagtctctgctcaattcaaatttgttcaatttatgtttaaactctt 24648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 155 - 193
Target Start/End: Original strand, 23935 - 23973
Alignment:
Q  155 acttttatcgttttcaaaaattcatatttaattcatttc 193  Q
    |||||||||||||||||||||||||||||||||||||||    
T  23935 acttttatcgttttcaaaaattcatatttaattcatttc 23973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 163
Target Start/End: Complemental strand, 25247 - 25208
Alignment:
Q  124 caaaatttgatttatatgtccagattttattacttttatc 163  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  25247 caaaatttgatttatatgtccatattttattacttttatc 25208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1190 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold1190
Description:

Target: scaffold1190; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 506 - 317
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgt--agacgtgttaagaacattacta 98  Q
    |||||||||||||||  | ||| ||||||||||||||||||||||||||||| | | ||||||| ||||||||| |  ||||||||||||||||||||||    
T  506 cactcagtattagtcctttctcaattcaaatttgtttaatttatgcttaaacacatgagtttttgaacaattttttggagacgtgttaagaacattacta 407  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttatt-acttttatcgttttcaaaaattcatatttaatt 187  Q
    |||||||||| |||||||||| || ||||||||||||| || | ||||||||| || | |||| ||||||||||||| | ||||||||||    
T  406 aaagttcctctgcaaaaaattgtcacaaaatttgatttctaggcccagattttgttaatttttgtcgttttcaaaaaattatatttaatt 317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 6232 - 6068
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgt--agacgtgttaagaacattacta 98  Q
    ||||||||||||||| || ||| |||||||||||||||||||||| |||||||||| ||||||| ||||||||| |  | ||||||||||||||||||||    
T  6232 cactcagtattagtccctcctcgattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacaaacgtgttaagaacattacta 6133  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    |||||| ||  |||||||||| |||||||||||||||| || || |||||||| ||| |||||||    
T  6132 aaagttactatgcaaaaaattgtcgcaaaatttgatttctacgttcagattttgttaattttatc 6068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0707 (Bit Score: 84; Significance: 4e-40; HSPs: 1)
Name: scaffold0707
Description:

Target: scaffold0707; HSP #1
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 7 - 163
Target Start/End: Complemental strand, 7209 - 7051
Alignment:
Q  7 gtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgt--agacgtgttaagaacattactaaaagtt 104  Q
    |||||||||||| ||||||||||||||||||||| |||||||| |||||| ||||||| ||||||||| |  ||||||||||| ||||||||||||||||    
T  7209 gtattagtctctcctccattcaaatttgtttaatgtatgcttatactcttgagtttttgaacaattttttgcagacgtgttaaaaacattactaaaagtt 7110  T
Q  105 cctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    | || |||||||||| || ||||||||||||| || ||||| ||||| ||| |||||||    
T  7109 catctgcaaaaaattgtcacaaaatttgatttctacgtccaaattttgttaattttatc 7051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0514 (Bit Score: 79; Significance: 4e-37; HSPs: 1)
Name: scaffold0514
Description:

Target: scaffold0514; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 6490 - 6353
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgt--agacgtgttaagaacattacta 98  Q
    ||||||||||||||   | ||| ||||||||||||||||||||||||||||||||| ||||||| ||||||||| |  ||||||||||||||||||||||    
T  6490 cactcagtattagtgcattctcaattcaaatttgtttaatttatgcttaaactcttgagtttttcaacaattttttggagacgtgttaagaacattacta 6391  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgattt 136  Q
    ||||||| ||  ||||||||| ||||||||||||||||    
T  6390 aaagttcatctacaaaaaattgtcgcaaaatttgattt 6353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385 (Bit Score: 79; Significance: 4e-37; HSPs: 3)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 8 - 115
Target Start/End: Complemental strand, 10258 - 10149
Alignment:
Q  8 tattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaa--ttttgtagacgtgttaagaacattactaaaagttc 105  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||  ||||||||||||||||||||||||| |||||||||    
T  10258 tattagtctctgctcaattcaaatttgtttaatttattcttaaactcttaagtttttttacaattttttgtagacgtgttaagaacattattaaaagttc 10159  T
Q  106 ctccgcaaaa 115  Q
    | ||||||||    
T  10158 cgccgcaaaa 10149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385; HSP #2
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 9404 - 9476
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaatttt 74  Q
    |||||||||||||||  | ||| |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  9404 cactcagtattagtccttcctcaattcaaatttgtttaatttatgcttaaact-ttaagttttttaacaatttt 9476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 193
Target Start/End: Complemental strand, 10109 - 10071
Alignment:
Q  155 acttttatcgttttcaaaaattcatatttaattcatttc 193  Q
    |||||||| ||||||||||||||||||||||||| ||||    
T  10109 acttttattgttttcaaaaattcatatttaattcgtttc 10071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 79; Significance: 4e-37; HSPs: 1)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 10 - 105
Target Start/End: Complemental strand, 49064 - 48967
Alignment:
Q  10 ttagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaa--ttttgtagacgtgttaagaacattactaaaagttc 105  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  49064 ttagtctctgctcaattcaaatttgtttaatttattcttaaactcttaagttttttaacaattttttgtagacgtgttaagaacattactaaaagttc 48967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1160 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold1160
Description:

Target: scaffold1160; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 1137 - 1301
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgt--agacgtgttaagaacattacta 98  Q
    |||||||||||| | ||| ||  |||||||||||||| |||||||||||||||| | ||||||| ||||||||| |  |||||||||||||||||||||     
T  1137 cactcagtattaatttctccttaattcaaatttgttttatttatgcttaaactcatgagtttttgaacaattttttgcagacgtgttaagaacattactt 1236  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    |||||| ||  |||||||||| |||||||||||||||| || ||||||||||| ||| |||||||    
T  1237 aaagtttctttgcaaaaaattgtcgcaaaatttgatttctacgtccagattttgttaattttatc 1301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 75; Significance: 9e-35; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 75; E-Value: 9e-35
Query Start/End: Original strand, 8 - 115
Target Start/End: Complemental strand, 240307 - 240198
Alignment:
Q  8 tattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaa--ttttgtagacgtgttaagaacattactaaaagttc 105  Q
    ||||||||| ||||| ||||||||||||||||||||| |||||||||||||||||||||||||  |||| |||| |||||||||||||||||||||||||    
T  240307 tattagtctttgctcaattcaaatttgtttaatttattcttaaactcttaagttttttaacaattttttttagatgtgttaagaacattactaaaagttc 240208  T
Q  106 ctccgcaaaa 115  Q
    | ||||||||    
T  240207 cgccgcaaaa 240198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 239472 - 239561
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaa--ttttgtagacgtgttaag 88  Q
    |||||||||||||||  | ||| |||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| ||||||||    
T  239472 cactcagtattagtccttactcaattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttttgtagatgtgttaag 239561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1191 (Bit Score: 70; Significance: 9e-32; HSPs: 1)
Name: scaffold1191
Description:

Target: scaffold1191; HSP #1
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 649 - 812
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaa--ttttgtagacgtgttaagaacattacta 98  Q
    ||||||||||||||| ||  || |||||||||||||||||||||| |||||||||| ||||||| |||||  ||||| ||||||| ||||||||||||||    
T  649 cactcagtattagtccctcttcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttgcagacgtgataagaacattacta 748  T
Q  99 aaagttcctccgcaaaaaattatcgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    ||||||| || || | ||||| |||||||||||||||| |  ||||||| ||| ||| |||||||    
T  749 aaagttcatctgc-acaaattgtcgcaaaatttgatttttgagtccagaatttgttaattttatc 812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0562 (Bit Score: 66; Significance: 2e-29; HSPs: 1)
Name: scaffold0562
Description:

Target: scaffold0562; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 4307 - 4199
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgt--agacgtgttaagaacattacta 98  Q
    |||||||||||||||||| ||| |||||||||||||||||||||| |||||||||| ||||||| ||||||||| |  || | |||||||||||||||||    
T  4307 cactcagtattagtctctcctcaattcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttacaggcatgttaagaacattacta 4208  T
Q  99 aaagttcct 107  Q
    |||||||||    
T  4207 aaagttcct 4199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0627 (Bit Score: 60; Significance: 8e-26; HSPs: 1)
Name: scaffold0627
Description:

Target: scaffold0627; HSP #1
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 24 - 136
Target Start/End: Original strand, 6934 - 7048
Alignment:
Q  24 attcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgta--gacgtgttaagaacattactaaaagttcctccgcaaaaaattat 121  Q
    |||||||||||||||||||||||||||| |||||| |||||||| | |||| |   | | |||| |||||||||||||||||| ||||||||||||||||    
T  6934 attcaaatttgtttaatttatgcttaaattcttaaattttttaatagttttttgctggcatgtttagaacattactaaaagtttctccgcaaaaaattat 7033  T
Q  122 cgcaaaatttgattt 136  Q
     ||||||||||||||    
T  7034 agcaaaatttgattt 7048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 60; Significance: 8e-26; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 6184 - 6306
Alignment:
Q  1 cactcagtattagtctctgctccattcaaatttgtttaatttatgcttaaactcttaagttttttaacaa--ttttgtagacgtgttaagaacattacta 98  Q
    |||||| |||||||| || ||| |||||||| ||||||||||||||||||||| |||||||||| |||||  ||||| | || |||||||||| ||||||    
T  6184 cactcaatattagtccctactcaattcaaatatgtttaatttatgcttaaacttttaagtttttgaacaattttttgcaaacatgttaagaacgttacta 6283  T
Q  99 aaagttcctccgcaaaaaattat 121  Q
    |||||||||| ||||||| ||||    
T  6284 aaagttcctcagcaaaaatttat 6306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0734 (Bit Score: 59; Significance: 3e-25; HSPs: 1)
Name: scaffold0734
Description:

Target: scaffold0734; HSP #1
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 28 - 136
Target Start/End: Complemental strand, 3436 - 3325
Alignment:
Q  28 aaatttgtttaatttatgcttaaactcttaagttttttaacaattttgt---agacgtgttaagaacattactaaaagttcctccgcaaaaaattatcgc 124  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||| |   ||||||||||||||| ||| |||||| ||||||| |||||| ||||||    
T  3436 aaatttgtttaatttatgcttaaactcttaagtttttcaacaatttttttacagacgtgttaagaacgttattaaaagatcctccg-aaaaaaatatcgc 3338  T
Q  125 -aaaatttgattt 136  Q
     ||||||||||||    
T  3337 aaaaatttgattt 3325  T

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Target: scaffold0571 (Bit Score: 55; Significance: 8e-23; HSPs: 1)
Name: scaffold0571
Description:

Target: scaffold0571; HSP #1
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 24 - 163
Target Start/End: Original strand, 8433 - 8573
Alignment:
Q  24 attcaaatttgtttaatttatgcttaaactcttaagttttttaacaa--ttttgtagacgtgttaagaacattactaaaagttcctccgcaaaaaattat 121  Q
    |||||||||||||||||||||| |||||||||| ||||||| |||||  |||||||||| || ||| |||||| |||||||||| || || | ||||| |    
T  8433 attcaaatttgtttaatttatgtttaaactcttgagtttttgaacaattttttgtagacatggtaacaacattgctaaaagttcatctgc-acaaattgt 8531  T
Q  122 cgcaaaatttgatttatatgtccagattttattacttttatc 163  Q
    ||||||||||||||| |  ||||| ||||| ||| |||||||    
T  8532 cgcaaaatttgatttttgcgtccaaattttgttaattttatc 8573  T

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Target: scaffold0005 (Bit Score: 51; Significance: 2e-20; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 28 - 162
Target Start/End: Original strand, 282940 - 283076
Alignment:
Q  28 aaatttgtttaatttatgcttaaactcttaagttttttaacaattttgtagac--gtgttaagaacattactaaaagttcctccgcaaaaaattatcgca 125  Q
    |||||||||||||| ||||||||||| ||||| |||| ||||||||| |  ||  |||||||||||||||| |||||||| || ||||||||||||| ||    
T  282940 aaatttgtttaatt-atgcttaaacttttaagattttgaacaattttttgcacaagtgttaagaacattacgaaaagttcatctgcaaaaaattatctca 283038  T
Q  126 aaatttgatttatatgtccag-attttattacttttat 162  Q
    |||||| |||| |  |||||| ||||| ||||||||||    
T  283039 aaattttatttctgcgtccagaattttgttacttttat 283076  T

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Target: scaffold0005; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 28 - 130
Target Start/End: Complemental strand, 283525 - 283422
Alignment:
Q  28 aaatttgtttaatttatgcttaaactcttaagttttttaacaattttgtagac--gtgttaagaacattactaaaagttcctccgcaaaaaattatcgca 125  Q
    |||||||||||||| ||||||||||| ||||| |||| ||||||||| |  ||  || |||||||||| || |||| ||  || ||||||||||||| ||    
T  283525 aaatttgtttaatt-atgcttaaacttttaagattttgaacaattttttgcacaagtattaagaacatcacgaaaattttatctgcaaaaaattatctca 283427  T
Q  126 aaatt 130  Q
    |||||    
T  283426 aaatt 283422  T

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Target: scaffold0640 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0640
Description:

Target: scaffold0640; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 27 - 118
Target Start/End: Complemental strand, 4182 - 4089
Alignment:
Q  27 caaatttgtttaatttatgcttaaactcttaagttttttaacaattttgt--agacgtgttaagaacattactaaaagttcctccgcaaaaaat 118  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| |  |||| |||||||||| ||| |||||  ||||||  |||||||    
T  4182 caaatttgtttaatttatgcttaaactcttaagtttttcaacaattttttacagacatgttaagaacgttattaaaacgtcctccaaaaaaaat 4089  T

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Target: scaffold0051 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 24 - 142
Target Start/End: Original strand, 52348 - 52467
Alignment:
Q  24 attcaaatttgtttaatttatgcttaaactcttaagttttttaacaattttgtagacg--tgttaagaacattactaaaagttcctccgcaaaaaattat 121  Q
    |||||||||| ||||||| || ||||||||||||||||||| || |||||| |  |||  | || |||||||||||||||||| ||||  |||||| |||    
T  52348 attcaaatttatttaatt-atacttaaactcttaagtttttaaataattttttgcacgcctattgagaacattactaaaagtttctccctaaaaaaatat 52446  T
Q  122 cgcaaaatttgatttatatgt 142  Q
    | ||||||||||||| |||||    
T  52447 ctcaaaatttgatttctatgt 52467  T

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