View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4957-Insertion-12 (Length: 366)
Name: NF4957-Insertion-12
Description: NF4957
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4957-Insertion-12 |
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Alignment Details
Target: chr1 (Bit Score: 290; Significance: 1e-163; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 290; E-Value: 1e-163
Query Start/End: Original strand, 8 - 318
Target Start/End: Complemental strand, 37010736 - 37010426
Alignment:
| Q |
8 |
gaccgaagcttcgaagagctagggttagacgcacgtctcgttcgcgctttactgaagaaacgaattgagaaacctactccaattcaacacgttgctattc |
107 |
Q |
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| T |
37010736 |
gaccgaagcttcgaagagctagggttagacgcacgtctcgttcgcgctttactgaagaaacgaattgagaaacctactccaattcaacacgttgctattc |
37010637 |
T |
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| Q |
108 |
cgttgattctcgaaggtaaagacgtcgttgctcgcgcaaaaactggttctggaaaaacacttgcttatcttcttccattgcttcagaaactgtttactgc |
207 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37010636 |
cgttgattctcgaaggtaaagacgtcgttgctcgcgcaaaaactggttctggaaaaacacttgcttatcttcttccattgcttcagaaactgtttactgc |
37010537 |
T |
|
| Q |
208 |
taatgttgataggaagaaactagctcctaatgttttcgttctcgcacctagtcgtgaactatgccaacaggtgcattccnnnnnnncaatttctattata |
307 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
37010536 |
taatgttgataggaagaaactagctcctaatgttttcgttctcgcacctagtcgtgaactatgccaacaggtgcattcctttgtttcaatttctattata |
37010437 |
T |
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| Q |
308 |
attgtcagtgc |
318 |
Q |
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||||||||||| |
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| T |
37010436 |
attgtcagtgc |
37010426 |
T |
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