View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4959-Insertion-6 (Length: 596)
Name: NF4959-Insertion-6
Description: NF4959
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4959-Insertion-6 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 545; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 545; E-Value: 0
Query Start/End: Original strand, 8 - 596
Target Start/End: Original strand, 42462564 - 42463152
Alignment:
| Q |
8 |
gtaagtagctttcacctctcttcctatctgtgttctattattaatattgacttcgatggttcatgatggagaaacctttgattcaccatttgatgtaaac |
107 |
Q |
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| T |
42462564 |
gtaagtagctttcacctctcttcctatctgtgttctattattaatattgacatcgatggttcatgatgtagaaacctttgattcaccatttgatgtaaac |
42462663 |
T |
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| Q |
108 |
atttttctgtattatttggttttagttttgattcctgcctctgccaaatatataattggtctcagacaagtaatatattgcgaaactgaaagttttaaaa |
207 |
Q |
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| T |
42462664 |
atttttctgtattatttggttttagttttgattcctgcctctgccaaatatataattggtctcagacaagtaatatattgcgaaactgaaagttttaaaa |
42462763 |
T |
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| Q |
208 |
caatgttgtaatacccatatgagcgtttgctgtggaattgacatataaatagagtatttatctttctttcgtatgttcgattctgtggatcgaatagtct |
307 |
Q |
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| T |
42462764 |
caatgttgtaatacccatatgagtgtttgctgtggaattgacctataaataaagtatttatctttctttcgtatgtttgattctgtggatcgaatagtct |
42462863 |
T |
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| Q |
308 |
tatacgttatgactatgacttaagggattggaaggaatgcaagaaatgtcaaatatatgctgatttttacatatccatttgtggacctgaacctgatgtc |
407 |
Q |
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| T |
42462864 |
tatacgttatgactatgacttgagggattggaaggaatgcaagaaatgtcaaatatatgctgatttttacatatccattcgtggacctgaacctgatgtc |
42462963 |
T |
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| Q |
408 |
acattctacctgctcctacatattttataatcttcatatcagtatccgcttttttatcatttctctttcttaaatcaaaggtttcatccctaacgatgga |
507 |
Q |
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| T |
42462964 |
acattctacctgctcctacatattttataatcttcatatcagtatccgcttttttatcatttatctttcttaaatcaaaggtttcatccctaacgatgga |
42463063 |
T |
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| Q |
508 |
ctaaagtacatttttgttgatttaattttaacgtttgcacttagggtgttgacctttttgcctttaattttaccttgtaatctgttagg |
596 |
Q |
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| T |
42463064 |
ttaaagtacatttttgttgatttaattttaacgtttgcacttagggtgctgacctttttgcctttaattttaccttgtaatctgttagg |
42463152 |
T |
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