View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4961_low_3 (Length: 213)
Name: NF4961_low_3
Description: NF4961
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4961_low_3 |
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Alignment Details
Target: chr4 (Bit Score: 169; Significance: 8e-91; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 169; E-Value: 8e-91
Query Start/End: Original strand, 15 - 195
Target Start/End: Original strand, 32250142 - 32250322
Alignment:
| Q |
15 |
atactttacaagaaaagctagcagcaatgtctgctctaccattctcaacaacctgcaggcattcaaactcacctttacatccccattccaaatcaaactt |
114 |
Q |
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| T |
32250142 |
atactttacaagaaaaactagcagcaatgtctgctctaccattctcaacaacctgcaggcattcaaactcacctttacatccccattccaaatcaaactt |
32250241 |
T |
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| Q |
115 |
tacaggtctcgatcaaagaaataatatttggcagttgtttttcatcacaaagtcaaattccagaagagcaattagaaagct |
195 |
Q |
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||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
32250242 |
tacaggtctcggtcaaagaaataatatttggcagttgtttgtcatcacaaagtcaaattccagaagagcaattagaaagct |
32250322 |
T |
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