View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4962-Insertion-3 (Length: 765)
Name: NF4962-Insertion-3
Description: NF4962
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4962-Insertion-3 |
 |  |
|
| [»] scaffold0192 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: scaffold0192 (Bit Score: 165; Significance: 8e-88; HSPs: 1)
Name: scaffold0192
Description:
Target: scaffold0192; HSP #1
Raw Score: 165; E-Value: 8e-88
Query Start/End: Original strand, 505 - 753
Target Start/End: Complemental strand, 19689 - 19441
Alignment:
| Q |
505 |
tttaattcatgatgagatgaactataacaagggagtgttagctgaagagcattcacgtttaatgtcaacgatgacaaatgagctacaacaagtgtatgac |
604 |
Q |
| |
|
||||||||||||||||||||||||||| | || |||||||||||||||||||||||||||||| |||||||||||| ||||| |||||||||||||||| |
|
|
| T |
19689 |
tttaattcatgatgagatgaactataatagggtagtgttagctgaagagcattcacgtttaatatcaacgatgacagatgagtaacaacaagtgtatgac |
19590 |
T |
 |
| Q |
605 |
aagataatgagtagggtcaacgcaaatactctagacctgttttcacaagagccaagggcaatcattgtgacatgttggattatatctcccaaagtctgta |
704 |
Q |
| |
|
|||||||||||||||||| | ||| ||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
19589 |
aagataatgagtagggtcgatgcagataatccagacctgttttcacaagagccaatggcaatcattgtgacatgttggattatatctcccaaaatctgta |
19490 |
T |
 |
| Q |
705 |
tttttgcatggacaattatatgtcgctgtctcaagaattacatccagag |
753 |
Q |
| |
|
|||| |||||| | |||||| | ||| ||||||||||||||||||||| |
|
|
| T |
19489 |
ttttcacatggatagttatattttgctatctcaagaattacatccagag |
19441 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 158; Significance: 1e-83; HSPs: 11)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 158; E-Value: 1e-83
Query Start/End: Original strand, 8 - 221
Target Start/End: Complemental strand, 15994456 - 15994244
Alignment:
| Q |
8 |
gaggatgtgcgcttgaggtattggagtttgtttttgattgcaacttcaggaggatgtctatgtttaatgtattttccaaaggctatttaatcttggaggc |
107 |
Q |
| |
|
|||||||||||||||||||||| |||| |||||||||||||||| ||||| |||||||||||| ||||||||| |||||||||||||||||||| |||| |
|
|
| T |
15994456 |
gaggatgtgcgcttgaggtattcgagtgtgtttttgattgcaacgccaggacgatgtctatgtt-aatgtatttcccaaaggctatttaatcttgaaggc |
15994358 |
T |
 |
| Q |
108 |
atttggtgagtaactttctgcataatttttgcagtatagtctattctttaattgcttaatgtatgctctatagagtggttattgctacactcatcttatg |
207 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||||||||| |
|
|
| T |
15994357 |
atttggtgattaactttctgcataatttttgcagtatagtctattctttaattgcttaatgtttgctctataaaatggttattgctacactcatcttatg |
15994258 |
T |
 |
| Q |
208 |
ctcatgtagaagcg |
221 |
Q |
| |
|
||||||||| |||| |
|
|
| T |
15994257 |
ctcatgtaggagcg |
15994244 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 490 - 645
Target Start/End: Complemental strand, 15993555 - 15993400
Alignment:
| Q |
490 |
tgatctggaaaaccgtttaattcatgatgagatgaactataacaagggagtgttagctgaagagcattcacgtttaatgtcaacgatgacaaatgagcta |
589 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| |||||||||||||||||||| |||||| | |
|
|
| T |
15993555 |
tgatctagaaaaccgtttaattcatgatgagatgaactataacaggggagtgttagatgaagagcattcatgtttaatgtcaacgatgacagatgagcaa |
15993456 |
T |
 |
| Q |
590 |
caacaagtgtatgacaagataatgagtagggtcaacgcaaatactctagacctgtt |
645 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |
|
|
| T |
15993455 |
caacaagtgtatgacaagataatgagtagggtcaatgcaaatactccagacctgtt |
15993400 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 285 - 364
Target Start/End: Complemental strand, 15994208 - 15994129
Alignment:
| Q |
285 |
tggtttgggatcttgatatgcacaaacaattctaactgtaaaaggcaccttaatgcaatgaaggtgtagaggactgaatg |
364 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15994208 |
tggtttgggatcttgatatgcacaaaaaattctaactgaaaaaggcaccttaatgcaatgaaggtgtagaggactgaatg |
15994129 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 696 - 753
Target Start/End: Complemental strand, 15993390 - 15993333
Alignment:
| Q |
696 |
aagtctgtatttttgcatggacaattatatgtcgctgtctcaagaattacatccagag |
753 |
Q |
| |
|
|||| |||||||| ||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
15993390 |
aagtttgtattttcacatggacaattatatgttcctgtctcaagaattacatccagag |
15993333 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 434 - 466
Target Start/End: Complemental strand, 8958001 - 8957969
Alignment:
| Q |
434 |
aggaaccccgaaccttgcatatattatgcattg |
466 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |
|
|
| T |
8958001 |
aggaaccccgaaccttgcatatattatgcattg |
8957969 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 436 - 466
Target Start/End: Complemental strand, 10926524 - 10926494
Alignment:
| Q |
436 |
gaaccccgaaccttgcatatattatgcattg |
466 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
10926524 |
gaaccccgaaccttgcatatattatgcattg |
10926494 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 436 - 466
Target Start/End: Original strand, 21331423 - 21331453
Alignment:
| Q |
436 |
gaaccccgaaccttgcatatattatgcattg |
466 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
21331423 |
gaaccccgaaccttgcatatattatgcattg |
21331453 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 436 - 466
Target Start/End: Complemental strand, 39779079 - 39779049
Alignment:
| Q |
436 |
gaaccccgaaccttgcatatattatgcattg |
466 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
39779079 |
gaaccccgaaccttgcatatattatgcattg |
39779049 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 436 - 466
Target Start/End: Complemental strand, 45334244 - 45334214
Alignment:
| Q |
436 |
gaaccccgaaccttgcatatattatgcattg |
466 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
45334244 |
gaaccccgaaccttgcatatattatgcattg |
45334214 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 436 - 466
Target Start/End: Complemental strand, 52119431 - 52119401
Alignment:
| Q |
436 |
gaaccccgaaccttgcatatattatgcattg |
466 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
52119431 |
gaaccccgaaccttgcatatattatgcattg |
52119401 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 436 - 465
Target Start/End: Original strand, 47099041 - 47099070
Alignment:
| Q |
436 |
gaaccccgaaccttgcatatattatgcatt |
465 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
47099041 |
gaaccccgaaccttgcatatattatgcatt |
47099070 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 77; Significance: 2e-35; HSPs: 5)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 649 - 753
Target Start/End: Complemental strand, 24323043 - 24322939
Alignment:
| Q |
649 |
acaagagccaagggcaatcattgtgacatgttggattatatctcccaaagtctgtatttttgcatggacaattatatgtcgctgtctcaagaattacatc |
748 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||||| || ||||||||| ||||||||||||||||| | |||||||||| ||||||| |
|
|
| T |
24323043 |
acaagagccaagggcaatcattgcgacatgttggattatatctcccaacgtatgtatttttacatggacaattatatgttgatgtctcaagagttacatc |
24322944 |
T |
 |
| Q |
749 |
cagag |
753 |
Q |
| |
|
||||| |
|
|
| T |
24322943 |
cagag |
24322939 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 588 - 634
Target Start/End: Complemental strand, 24323486 - 24323440
Alignment:
| Q |
588 |
tacaacaagtgtatgacaagataatgagtagggtcaacgcaaatact |
634 |
Q |
| |
|
||||||||||||||| |||||||||||||| |||||| ||||||||| |
|
|
| T |
24323486 |
tacaacaagtgtatgccaagataatgagtaaggtcaatgcaaatact |
24323440 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 436 - 466
Target Start/End: Complemental strand, 13196755 - 13196725
Alignment:
| Q |
436 |
gaaccccgaaccttgcatatattatgcattg |
466 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
13196755 |
gaaccccgaaccttgcatatattatgcattg |
13196725 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 436 - 466
Target Start/End: Original strand, 20120727 - 20120757
Alignment:
| Q |
436 |
gaaccccgaaccttgcatatattatgcattg |
466 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
20120727 |
gaaccccgaaccttgcatatattatgcattg |
20120757 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 436 - 465
Target Start/End: Original strand, 5168585 - 5168614
Alignment:
| Q |
436 |
gaaccccgaaccttgcatatattatgcatt |
465 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
5168585 |
gaaccccgaaccttgcatatattatgcatt |
5168614 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 49; Significance: 1e-18; HSPs: 8)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 649 - 753
Target Start/End: Complemental strand, 43418628 - 43418524
Alignment:
| Q |
649 |
acaagagccaagggcaatcattgtgacatgttggattatatctcccaaagtctgtatttttgcatggacaattatatgtcgctgtctcaagaattacatc |
748 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||| ||||| | | || |||||||| |||| |||||||||||| |||||||||||| |||| || |
|
|
| T |
43418628 |
acaagagccaagggcaatcattgaaacatgttggattttatcttctgacgtatgtattttcacatgaacaattatatgttgctgtctcaagagttacctc |
43418529 |
T |
 |
| Q |
749 |
cagag |
753 |
Q |
| |
|
||||| |
|
|
| T |
43418528 |
cagag |
43418524 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 436 - 466
Target Start/End: Complemental strand, 4830063 - 4830033
Alignment:
| Q |
436 |
gaaccccgaaccttgcatatattatgcattg |
466 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
4830063 |
gaaccccgaaccttgcatatattatgcattg |
4830033 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 436 - 466
Target Start/End: Complemental strand, 7679957 - 7679927
Alignment:
| Q |
436 |
gaaccccgaaccttgcatatattatgcattg |
466 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
7679957 |
gaaccccgaaccttgcatatattatgcattg |
7679927 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 436 - 466
Target Start/End: Original strand, 8717481 - 8717511
Alignment:
| Q |
436 |
gaaccccgaaccttgcatatattatgcattg |
466 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
8717481 |
gaaccccgaaccttgcatatattatgcattg |
8717511 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 436 - 466
Target Start/End: Original strand, 12714376 - 12714406
Alignment:
| Q |
436 |
gaaccccgaaccttgcatatattatgcattg |
466 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
12714376 |
gaaccccgaaccttgcatatattatgcattg |
12714406 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 436 - 466
Target Start/End: Complemental strand, 32192949 - 32192919
Alignment:
| Q |
436 |
gaaccccgaaccttgcatatattatgcattg |
466 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
32192949 |
gaaccccgaaccttgcatatattatgcattg |
32192919 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 436 - 466
Target Start/End: Complemental strand, 37141412 - 37141382
Alignment:
| Q |
436 |
gaaccccgaaccttgcatatattatgcattg |
466 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
37141412 |
gaaccccgaaccttgcatatattatgcattg |
37141382 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 437 - 466
Target Start/End: Original strand, 29924924 - 29924953
Alignment:
| Q |
437 |
aaccccgaaccttgcatatattatgcattg |
466 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
29924924 |
aaccccgaaccttgcatatattatgcattg |
29924953 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 684 - 753
Target Start/End: Complemental strand, 41863139 - 41863070
Alignment:
| Q |
684 |
ttatatctcccaaagtctgtatttttgcatggacaattatatgtcgctgtctcaagaattacatccagag |
753 |
Q |
| |
|
||||||||||||| |||||||||| ||||||||||||||||| | |||||||||| |||||||||||| |
|
|
| T |
41863139 |
ttatatctcccaacatctgtattttcacatggacaattatatgttgttgtctcaagagttacatccagag |
41863070 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 436 - 466
Target Start/End: Complemental strand, 27533298 - 27533268
Alignment:
| Q |
436 |
gaaccccgaaccttgcatatattatgcattg |
466 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
27533298 |
gaaccccgaaccttgcatatattatgcattg |
27533268 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 436 - 466
Target Start/End: Original strand, 44678023 - 44678053
Alignment:
| Q |
436 |
gaaccccgaaccttgcatatattatgcattg |
466 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
44678023 |
gaaccccgaaccttgcatatattatgcattg |
44678053 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 33; Significance: 0.000000004; HSPs: 4)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 649 - 753
Target Start/End: Original strand, 33315545 - 33315649
Alignment:
| Q |
649 |
acaagagccaagggcaatcattgtgacatgttggattatatctcccaaagtctgtatttttgcatggacaattatatgtcgctgtctcaagaattacatc |
748 |
Q |
| |
|
|||||||| ||||| ||| | || ||||||||||||||||||| ||| | | |||||| |||||| |||||||| | || ||||||||| ||||||| |
|
|
| T |
33315545 |
acaagagctaagggaaattactgcgacatgttggattatatctttcaacgccaatattttcacatggagaattatatattgccgtctcaagagttacatc |
33315644 |
T |
 |
| Q |
749 |
cagag |
753 |
Q |
| |
|
||||| |
|
|
| T |
33315645 |
cagag |
33315649 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 436 - 466
Target Start/End: Complemental strand, 22040705 - 22040675
Alignment:
| Q |
436 |
gaaccccgaaccttgcatatattatgcattg |
466 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
22040705 |
gaaccccgaaccttgcatatattatgcattg |
22040675 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 436 - 466
Target Start/End: Original strand, 28435254 - 28435284
Alignment:
| Q |
436 |
gaaccccgaaccttgcatatattatgcattg |
466 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
28435254 |
gaaccccgaaccttgcatatattatgcattg |
28435284 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 436 - 466
Target Start/End: Complemental strand, 34042295 - 34042265
Alignment:
| Q |
436 |
gaaccccgaaccttgcatatattatgcattg |
466 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
34042295 |
gaaccccgaaccttgcatatattatgcattg |
34042265 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 31; Significance: 0.00000007; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 436 - 466
Target Start/End: Complemental strand, 45425508 - 45425478
Alignment:
| Q |
436 |
gaaccccgaaccttgcatatattatgcattg |
466 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
45425508 |
gaaccccgaaccttgcatatattatgcattg |
45425478 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 437 - 466
Target Start/End: Original strand, 30463378 - 30463407
Alignment:
| Q |
437 |
aaccccgaaccttgcatatattatgcattg |
466 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
30463378 |
aaccccgaaccttgcatatattatgcattg |
30463407 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 31; Significance: 0.00000007; HSPs: 3)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 436 - 466
Target Start/End: Original strand, 8629702 - 8629732
Alignment:
| Q |
436 |
gaaccccgaaccttgcatatattatgcattg |
466 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
8629702 |
gaaccccgaaccttgcatatattatgcattg |
8629732 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 436 - 466
Target Start/End: Original strand, 26356087 - 26356117
Alignment:
| Q |
436 |
gaaccccgaaccttgcatatattatgcattg |
466 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
26356087 |
gaaccccgaaccttgcatatattatgcattg |
26356117 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 436 - 465
Target Start/End: Original strand, 21029372 - 21029401
Alignment:
| Q |
436 |
gaaccccgaaccttgcatatattatgcatt |
465 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
21029372 |
gaaccccgaaccttgcatatattatgcatt |
21029401 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 31; Significance: 0.00000007; HSPs: 4)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 436 - 466
Target Start/End: Complemental strand, 27903168 - 27903138
Alignment:
| Q |
436 |
gaaccccgaaccttgcatatattatgcattg |
466 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
27903168 |
gaaccccgaaccttgcatatattatgcattg |
27903138 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 436 - 465
Target Start/End: Original strand, 12670080 - 12670109
Alignment:
| Q |
436 |
gaaccccgaaccttgcatatattatgcatt |
465 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
12670080 |
gaaccccgaaccttgcatatattatgcatt |
12670109 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 436 - 465
Target Start/End: Complemental strand, 18872722 - 18872693
Alignment:
| Q |
436 |
gaaccccgaaccttgcatatattatgcatt |
465 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
18872722 |
gaaccccgaaccttgcatatattatgcatt |
18872693 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 436 - 465
Target Start/End: Complemental strand, 27679553 - 27679524
Alignment:
| Q |
436 |
gaaccccgaaccttgcatatattatgcatt |
465 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
27679553 |
gaaccccgaaccttgcatatattatgcatt |
27679524 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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