View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4963_high_12 (Length: 295)
Name: NF4963_high_12
Description: NF4963
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4963_high_12 |
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Alignment Details
Target: chr4 (Bit Score: 261; Significance: 1e-145; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 13 - 277
Target Start/End: Complemental strand, 53866234 - 53865970
Alignment:
| Q |
13 |
aatataacggacccaaaggacaattgacagaatattgtgcaaaggtgaaaacatcagcgaccttcaataagaaaagtaaagtgaaatacttttttaataa |
112 |
Q |
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| T |
53866234 |
aatataacggacccaaaggacaattgacagaatattgtgcaaaggtgaaaacatcagcgaccttcaataagaaaagtaaagtgaaatacttttttaataa |
53866135 |
T |
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| Q |
113 |
taatatttgaaaacaatgaagttgttgattgtaataatatgaaggatatatatatacccctatagttgtatatgctgaacaacgaatagtgatttcaacg |
212 |
Q |
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| T |
53866134 |
taatatttgaaaacaatgaagttgttgattgtaataatatgaaggatatatatatacccccatagttgtatatgctgaacaacgaatagtgatttcaacg |
53866035 |
T |
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| Q |
213 |
tcttctaagctctcctcttgattatcatgttgtaagtcaagcttgcaggcagcgactataaccgg |
277 |
Q |
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| T |
53866034 |
tcttctaagctctcctcttgattatcatgttgtaagtcaagcttgcaggcagcgactataaccgg |
53865970 |
T |
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