View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4964_high_8 (Length: 333)
Name: NF4964_high_8
Description: NF4964
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4964_high_8 |
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Alignment Details
Target: chr2 (Bit Score: 285; Significance: 1e-160; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 285; E-Value: 1e-160
Query Start/End: Original strand, 1 - 324
Target Start/End: Complemental strand, 8249454 - 8249129
Alignment:
| Q |
1 |
tttataaggaggggtccagaatttggaggatgccatcgatattatcttattttctgactcatttcttggaccaaactgtgatatcaatactac-tataga |
99 |
Q |
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| T |
8249454 |
tttataaggaggggtccagaatttggaggatgccatcgatattatcttattttctgactcatttcttggaccaaactgtgatatcaatactacctataga |
8249355 |
T |
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| Q |
100 |
aaaaacctgtgacagtgata-caatacactggtccaatattttcttccgatggttgctttatattttatttcaaactaatctttctataagagtagcaat |
198 |
Q |
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| T |
8249354 |
aaaaacctgtgacagtgatatcaatacactggtccaatattttcttccgatggttgctttatattttatttcaaactactctttctataagagtagcaat |
8249255 |
T |
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| Q |
199 |
attgatcaaagagtagcgatttgttaacttcaaagaagaagnnnnnnngagtggatacgaaaagactaattttagacacaaaattgatttttacatgcat |
298 |
Q |
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| T |
8249254 |
attgatcaaagagtagcgatttgttaacttcaaagaagaagaaaaaaagagtggatacgaaaagactaattttagacacaaaattgatttttacatgcat |
8249155 |
T |
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| Q |
299 |
gtttgagggatgtcgattagaataat |
324 |
Q |
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| T |
8249154 |
gtttgagggatgtcgattagaataat |
8249129 |
T |
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