View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4965-Insertion-12 (Length: 272)
Name: NF4965-Insertion-12
Description: NF4965
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4965-Insertion-12 |
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Alignment Details
Target: chr6 (Bit Score: 245; Significance: 1e-136; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 7 - 271
Target Start/End: Complemental strand, 10317599 - 10317335
Alignment:
| Q |
7 |
acttgcaaccttcctagtgatgcaaaggtaccctcttaattttatttcattttgttaccattttctattgatttagaaaaggaaaagatcaagcttttca |
106 |
Q |
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| T |
10317599 |
acttgcaaccttcctagtgatgcaaaggtaccctcttaattttatttcattttgttaccattttctattgatttagaaaaggaaaagatcaagcttttca |
10317500 |
T |
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| Q |
107 |
atagtttttaatttcaatataaaaattaatgcgatgttttattgaggttagttcattagttgaaaatgtttaatcattcttgcaaattagatgaattaga |
206 |
Q |
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| T |
10317499 |
atagtttttaatttcaatataaaaattaatgtaatgttttattgaggttagtacattagttgaaaatgtttaatcattcttgcaaattagatgaattaga |
10317400 |
T |
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| Q |
207 |
gagacattacttgtgatcgatccactgtacttgaattgcaaccgatcataattttcgcttcatca |
271 |
Q |
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| T |
10317399 |
gagacattacttgtgatcgatccattgtacttgaattgcaaacgatcataattttcgcttcatca |
10317335 |
T |
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