View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4965-Insertion-14 (Length: 354)
Name: NF4965-Insertion-14
Description: NF4965
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4965-Insertion-14 |
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Alignment Details
Target: chr4 (Bit Score: 181; Significance: 1e-97; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 5 - 209
Target Start/End: Original strand, 9615837 - 9616041
Alignment:
| Q |
5 |
acagtatgtgcattgagtcaatcaaaaaatgtttagcgaaaactccaagtgtgaggaaacataatactatattaattctatgaaagagttagtaaatcca |
104 |
Q |
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| T |
9615837 |
acagtatgtgcattgagtcaatcaaaaaatgtttagtgaaaactccaagtatgagtaaatacaatactatattaattctatgaaagagttagtaaatcca |
9615936 |
T |
|
| Q |
105 |
cgaaggaaggcaaatgctacctagcttagtggtagaatagtatgccttgtcgattccatgtatatcgatcgattaccatctcatccattctaaatttttt |
204 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
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| T |
9615937 |
cgaaggaaggcaaatgctacctagcttagtggtagaatagtatgccttgtcgattccatgtatatcgatcgattaccatctcttccattctaaatttttt |
9616036 |
T |
|
| Q |
205 |
ctaaa |
209 |
Q |
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||||| |
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| T |
9616037 |
ctaaa |
9616041 |
T |
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