View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4965-Insertion-15 (Length: 271)
Name: NF4965-Insertion-15
Description: NF4965
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4965-Insertion-15 |
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Alignment Details
Target: chr4 (Bit Score: 167; Significance: 2e-89; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 11 - 265
Target Start/End: Complemental strand, 21093368 - 21093109
Alignment:
| Q |
11 |
ttaaggagtccacttaatctaattatatcaaattgactaactaagtatttttcaatgtaaataatcacgttatttcgaagaaactcatcatctaattcaa |
110 |
Q |
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| T |
21093368 |
ttaaggagtcaacttaatctacttatatcaaattgactaacaaagtctttttcaatgtaaataatcacgttatttcgaagaaactcatcatctaactcaa |
21093269 |
T |
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| Q |
111 |
ttttagtcttgctttgatgatttttattgttaataaagttcgtgatcctcgtt-----nnnnnnncactaaagtttttatccagtcggacctgagatcct |
205 |
Q |
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| T |
21093268 |
ttttagtcttcctttgataatttttattgttaataaagttcttgatcctctttaaaaaaaaaaaaaactaaagtttttatccagtcggacctgagatcct |
21093169 |
T |
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| Q |
206 |
tgagttaacggcgttgaatgacctttggataggacatgttcgacaattgatgcgttcttc |
265 |
Q |
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| T |
21093168 |
tgagttaacggcgttgaatgacctttggataggacacgttcgacagttgatgccttcttc |
21093109 |
T |
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