View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4965-Insertion-2 (Length: 1011)
Name: NF4965-Insertion-2
Description: NF4965
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4965-Insertion-2 |
 | |
|
| [»] scaffold0024 (4 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 475; Significance: 0; HSPs: 18)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 475; E-Value: 0
Query Start/End: Original strand, 16 - 984
Target Start/End: Original strand, 2926888 - 2927851
Alignment:
| Q |
16 |
atttcaaacgctgttattctgaaaccttactattttctcaagatgaacttgttaagttagtcttaatcgattcttgttttataattcaaatttttcggaa |
115 |
Q |
| |
|
|||||||||| |||||||| |||||| ||| ||||||||| |||||||||||||||||| |||||||| |||| ||||||||||||| ||||| ||| |
|
|
| T |
2926888 |
atttcaaacgttgttattccgaaaccctaccattttctcatgatgaacttgttaagttaatcttaatcaattccgcttttataattcaacttttttggac |
2926987 |
T |
|
| Q |
116 |
atattatcatggtgggtttccctttaaaccatggttagccaatggtataatacaagatttattgttacttgaaaatcagcttccctttttcgttattgaa |
215 |
Q |
| |
|
|| ||| | | |||| || ||||||||| ||||||| |||||||||| ||| ||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2926988 |
atcctattacgaagggtgtctctttaaaccttggttagataatggtataagacacgatttatggttacttgaaaatcagcttccctttttcgttattgaa |
2927087 |
T |
|
| Q |
216 |
aaaatttacagtctttcattcagttctacgaaagctagtgttcctaacactgcaatcccttcttttcttaaactcactattcattattttggttattaca |
315 |
Q |
| |
|
|||||||||||||||||||| | ||| |||||||| |||| |||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2927088 |
aaaatttacagtctttcattga------------ctaatgttcctaccactatgatccattcttttcttaaactcactattcattattttggttattaca |
2927175 |
T |
|
| Q |
316 |
ataaatcaaaattggattttgataagggtgatattagtataaggcacttcactgatctgattaggatatttcatttgccacatcctattgaaagtcagac |
415 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| | | |
|
|
| T |
2927176 |
ataaatcaaaattgaattttgataagggtgatattattataaggcacttcactgatctgattcggatatttcatttgcaacatcctattgaaagtcggcc |
2927275 |
T |
|
| Q |
416 |
gcgtagataccagttcggcctacagatgatacaac---tacggagtgcaactgagttgttagaagctggagttaggtttaaagtgaacactgaaagtga- |
511 |
Q |
| |
|
| ||||| ||| | || ||||| ||||||| ||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
2927276 |
gagtagagaccgggtctgcctagggatgataaaacatctaccgagtgcaactgagttgttagaagctggagttaggtttaaagtgaacactgaaagtaag |
2927375 |
T |
|
| Q |
512 |
--tttacttgaatggaggttttcgggaggagttcttgaaattcctcaattattagttggggatggcaccgaatctttatttcggaatatgattgctttgg |
609 |
Q |
| |
|
||||||||| | ||||||||||||||||||||||||||||||||||||| |||| |||| || ||| ||||||| ||||||||| ||||||||| |
|
|
| T |
2927376 |
tgtttacttgacttgaggttttcgggaggagttcttgaaattcctcaattaaaagttcaggattcgactgaaactttattacggaatatggttgctttgg |
2927475 |
T |
|
| Q |
610 |
agcagtgtcattacccttatgagtcctatattcttgattatgttactattatggatttccttataaatactggtaaggacgcggacatacttattcagaa |
709 |
Q |
| |
|
||||||||||||||||| |||| || |||||| ||||||| | || || |||||| ||||||||||||||||||||| | ||| |||||| |||||| |
|
|
| T |
2927476 |
agcagtgtcattaccctgatgattcatatattactgattatcgttctgttttggattaccttataaatactggtaaggatgtggatatacttgttcagag |
2927575 |
T |
|
| Q |
710 |
agaaatactggaaaattggtttggagacaatcattctgtggctaacatgtttaatggtctttgcaaaaatattatacattctaatatcagttctcaattc |
809 |
Q |
| |
|
||||||||||||||| | |||||||| | |||||||||||||| |||||||||||||| | |||||| ||| || ||||| ||||||||||||||| |
|
|
| T |
2927576 |
ggaaatactggaaaatatgcttggagacggtgattctgtggctaacttgtttaatggtcttggtaaaaatgttacacgttctacaatcagttctcaattc |
2927675 |
T |
|
| Q |
810 |
tctattctatgcaaagacttaaatgctttttgtaagaatccttggcataggttgaaggctactctcaggcgtgattattgcaatactccttggcacactg |
909 |
Q |
| |
|
|||||||| ||||||||||||||||||| |||||||||||| | |||| ||||||||||||||||||||||||||||||||| ||||||||||| |||| |
|
|
| T |
2927676 |
tctattctttgcaaagacttaaatgcttattgtaagaatccacgacataagttgaaggctactctcaggcgtgattattgcaaaactccttggcaaactg |
2927775 |
T |
|
| Q |
910 |
ctgcttccgttgcgggaattttactacttgttctcactttacttcaatcagtttgttcagtc-tgcaagtagtaca |
984 |
Q |
| |
|
|||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| ||| ||||||| ||||| |
|
|
| T |
2927776 |
ctgcttccattgcgggaatcttactacttgttctcactttacttcaatcagtttgttctgtcttgcaagttgtaca |
2927851 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 455; E-Value: 0
Query Start/End: Original strand, 16 - 967
Target Start/End: Complemental strand, 3004131 - 3003189
Alignment:
| Q |
16 |
atttcaaacgctgttattctgaaaccttactattttctcaagatgaacttgttaagttagtcttaatcgattcttgttttataattcaaatttttcggaa |
115 |
Q |
| |
|
|||||||||| |||||||| |||||| ||| ||||||||| |||||||||||||||||| ||||||||||||| ||||||||||||| ||||| ||| |
|
|
| T |
3004131 |
atttcaaacgttgttattccgaaaccctaccattttctcatgatgaacttgttaagttaatcttaatcgattccgcttttataattcaacttttttggag |
3004032 |
T |
|
| Q |
116 |
atattatcatg---gtgggt---ttccctttaaaccatggttagccaatggtataatacaagatttattgttacttgaaaatcagcttccctttttcgtt |
209 |
Q |
| |
|
||| ||| ||| || ||| ||| ||||||||| ||||||| |||||||||| | | ||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
3004031 |
atactattatgatcgtcggtgcattctctttaaaccttggttagataatggtataagaaacgatttatggttacttgaaaatcagcttccctttttcgtt |
3003932 |
T |
|
| Q |
210 |
attgaaaaaatttacagtctttcattcagttctacgaaagctagtgttcctaacactgcaatcccttcttttcttaaactcactattcattattttggtt |
309 |
Q |
| |
|
|||||||||||||||||||||||||| | ||| |||||||| |||| |||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
3003931 |
attgaaaaaatttacagtctttcattga------------ctaatgttcctaccactatgatccattcttttcttaaactcactattcattattttggtt |
3003844 |
T |
|
| Q |
310 |
attacaataaatcaaaattggattttgataagggtgatattagtataaggcacttcactgatctgattaggatatttcatttgccacatcctattgaaag |
409 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
3003843 |
attacaataaatcaaaattggattttgataagggtgatattagtataagtcacttcactgatctgattaggatatttcatttgcaacatcctattgaaag |
3003744 |
T |
|
| Q |
410 |
tcagacgcgtagataccagttcggcctacagatgatacaactacggagtgcaactgagttgttagaagctggagttaggtttaaagtgaacactgaaagt |
509 |
Q |
| |
|
|| | || ||||| || | | ||||| ||| | || ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
3003743 |
tcggccgagtagag------tcagagaatggatgaaacatccaccgagtgcaactgagttgttagaagctggagttagatttaaagtgaacactgaaagt |
3003650 |
T |
|
| Q |
510 |
ga---tttacttgaatggaggttttcgggaggagttcttgaaattcctcaattattagttggggatggcaccgaatctttatttcggaatatgattgctt |
606 |
Q |
| |
|
| ||||||||| | |||||||||||||||||||||||||||||||||||||||||||| |||| |||||| ||||||||||||||||| |||||| |
|
|
| T |
3003649 |
aagtgtttacttgacttgaggttttcgggaggagttcttgaaattcctcaattattagttgcggattcgaccgaaactttatttcggaatatggttgctt |
3003550 |
T |
|
| Q |
607 |
tggagcagtgtcattacccttatgagtcctatattcttgattatgttactattatggatttccttataaatactggtaaggacgcggacatacttattca |
706 |
Q |
| |
|
|||||||||||||||||||| |||| || |||||| |||||| | || || |||||| |||||||||||||| |||||| | ||| |||||| |||| |
|
|
| T |
3003549 |
tggagcagtgtcattaccctgatgattcatatattaccgattatcgttctgttttggattaccttataaatactgctaaggatgtggatatacttgttca |
3003450 |
T |
|
| Q |
707 |
gaaagaaatactggaaaattggtttggagacaatcattctgtggctaacatgtttaatggtctttgcaaaaatattatacattctaatatcagttctcaa |
806 |
Q |
| |
|
|| ||||||||||||||| | ||||||||| | |||||||||||||| |||||||||||||| ||||| ||||||||| ||||| |||||||||||| |
|
|
| T |
3003449 |
gagcgaaatactggaaaatatgcttggagacagtgattctgtggctaacttgtttaatggtcttggcaaagatattatacgttctacaatcagttctcaa |
3003350 |
T |
|
| Q |
807 |
ttctctattctatgcaaagacttaaatgctttttgtaagaatccttggcataggttgaaggctactctcaggcgtgattattgcaatactccttggcaca |
906 |
Q |
| |
|
||||||||||| |||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||| ||||| | |
|
|
| T |
3003349 |
ttctctattcttggcaaagacttaaatgcttattgtaagaatccatggcataagttgaaggctactctcaggcgtgattattgcaaaactccctggcaaa |
3003250 |
T |
|
| Q |
907 |
ctgctgcttccgttgcgggaattttactacttgttctcactttacttcaatcagtttgttc |
967 |
Q |
| |
|
||||||||||| |||| ||||| ||||| |||| |||||||||||||||| |||||||||| |
|
|
| T |
3003249 |
ctgctgcttccattgctggaatcttactccttgctctcactttacttcaaacagtttgttc |
3003189 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 423; E-Value: 0
Query Start/End: Original strand, 16 - 984
Target Start/End: Original strand, 2934327 - 2935290
Alignment:
| Q |
16 |
atttcaaacgctgttattctgaaaccttactattttctcaagatgaacttgttaagttagtcttaatcgattcttgttttataattcaaatttttcggaa |
115 |
Q |
| |
|
|||||||||| ||||||||||||||| ||| ||||||||| |||||||||||||||||| | ||||| ||||| ||||||||||||| ||||| ||| |
|
|
| T |
2934327 |
atttcaaacgttgttattctgaaaccctaccattttctcatgatgaacttgttaagttaattttaatagattccgcttttataattcaacttttttggag |
2934426 |
T |
|
| Q |
116 |
atattatcatggtgggtttccctttaaaccatggttagccaatggtataatacaagatttattgttacttgaaaatcagcttccctttttcgttattgaa |
215 |
Q |
| |
|
| | ||| ||| ||| || ||||||||| | ||||| | |||||||| | | |||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2934427 |
agactattatgaagggcgtctctttaaacctttgttagatactggtataacagacgatttaatgttacttgaaaatcagcttccctttttcgttattgaa |
2934526 |
T |
|
| Q |
216 |
aaaatttacagtctttcattcagttctacgaaagctagtgttcctaacactgcaatccc---ttcttttcttaaactcactattcattattttggttatt |
312 |
Q |
| |
|
|||||||||||||||||||| | ||| || ||| |||||| || | ||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
2934527 |
aaaatttacagtctttcattga------------ctaatgatcccaacactatgatacaatattcttttcttagactcactattcattattttggttatt |
2934614 |
T |
|
| Q |
313 |
acaataaatcaaaattggattttgataagggtgatattagtataaggcacttcactgatctgattaggatatttcatttgccacatcctattgaaagtca |
412 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
2934615 |
acaataaatcaaaattggattttgataagggtgatattagtataaggcacttcactgatctgattaggatatttcatttgcaacatcctattgaaagtcg |
2934714 |
T |
|
| Q |
413 |
gacgcgtagataccagttcggcctacagatgatacaactacggagtgcaactgagttgttagaagctggagttaggtttaaagtgaacactgaaagtga- |
511 |
Q |
| |
|
| || ||||| || ||||| | ||||| |||| |||| |||||||||| |||||||||||||||||||||||||||||||| ||| ||||| | |
|
|
| T |
2934715 |
gccgagtagagacatgttcgacgaacagaagataagtctacccggtgcaactgaattgttagaagctggagttaggtttaaagtgaatactaaaagtaag |
2934814 |
T |
|
| Q |
512 |
--tttacttgaatggaggttttcgggaggagttcttgaaattcctcaattattagttggggatggcaccgaatctttatttcggaatatgattgctttgg |
609 |
Q |
| |
|
||||||||| | ||||||||||||||||||||||||||||||||||||| |||| ||| | || ||| || ||||| |||||| ||||||||| |
|
|
| T |
2934815 |
tgtttacttgacttgaggttttcgggaggagttcttgaaattcctcaattaacggttgacgataggactgaaatttcgtttcgaaatatggttgctttgg |
2934914 |
T |
|
| Q |
610 |
agcagtgtcattacccttatgagtcctatattcttgattatgttactattatggatttccttataaatactggtaaggacgcggacatacttattcagaa |
709 |
Q |
| |
|
||||||||||||||||| |||| || ||||| |||||||||| || | ||||||| ||||||||||||||||| ||| || || |||||| ||| ||| |
|
|
| T |
2934915 |
agcagtgtcattaccctgatgattcatatatcactgattatgttgctgtcatggattaccttataaatactggtacggatgctgatatacttgttcggaa |
2935014 |
T |
|
| Q |
710 |
agaaatactggaaaattggtttggagacaatcattctgtggctaacatgtttaatggtctttgcaaaaatattatacattctaatatcagttctcaattc |
809 |
Q |
| |
|
||||||||| | ||| | ||| || | | |||||||||||||| |||||||||||||||| |||||| ||| ||| ||||||||||||||||| ||| |
|
|
| T |
2935015 |
cgaaatactgcataatatgcttgcggatagtgattctgtggctaacttgtttaatggtctttggaaaaatgttacacaatctaatatcagttctcatttc |
2935114 |
T |
|
| Q |
810 |
tctattctatgcaaagacttaaatgctttttgtaagaatccttggcataggttgaaggctactctcaggcgtgattattgcaatactccttggcacactg |
909 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| |||| |
|
|
| T |
2935115 |
tctattctatgcaaagacttaaatgctttttgtaagaatccttggcataagttgaaggctactctcaggcgtgattattgcaaaactccttggcaaactg |
2935214 |
T |
|
| Q |
910 |
ctgcttccgttgcgggaattttactacttgttctcactttacttcaatcagtttgttcagtc-tgcaagtagtaca |
984 |
Q |
| |
|
|||||||| |||| ||||| ||||||||| |||||||||||||||||||||||||||| ||| ||||||| ||||| |
|
|
| T |
2935215 |
ctgcttccattgctggaatcttactactttttctcactttacttcaatcagtttgttctgtcttgcaagttgtaca |
2935290 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 389; E-Value: 0
Query Start/End: Original strand, 16 - 967
Target Start/End: Original strand, 2964216 - 2965200
Alignment:
| Q |
16 |
atttcaaacgctgttattctgaaaccttactattttctcaagatgaacttgttaagttagtcttaatcgattcttgttttataattcaaatttttcggaa |
115 |
Q |
| |
|
|||||||| |||||||||| ||||| ||| ||||||||| ||||||||||| |||||| |||||||||||||| ||||||||||| || ||||| | | |
|
|
| T |
2964216 |
atttcaaatgctgttattccgaaactctaccattttctcatgatgaacttgtcaagttaatcttaatcgattctggttttataattgaacttttttgcag |
2964315 |
T |
|
| Q |
116 |
at---attatcatggtgggt---------ttccctttaaaccatggttagccaatggtataatacaagatttattgttacttgaaaatcagcttcccttt |
203 |
Q |
| |
|
|| ||||| ||| | ||| ||| || || ||| |||||| |||||||| | ||||||| |||||||||||||||||||||||| | |
|
|
| T |
2964316 |
atcctattatgatgttcggtgcattaatattctctctataccttggttatatgttggtataagatcagatttaatgttacttgaaaatcagcttccctat |
2964415 |
T |
|
| Q |
204 |
ttcgttattgaaaaaatttacagtctttcattcagttctacgaaagctagtgttcctaacactgcaatcccttcttttcttaaactcactattcattatt |
303 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||| ||||||||||||||||||||||||| | |||||| |
|
|
| T |
2964416 |
ttcgttattgaaaaaatttacagtctttcattgagttctacaaatgctagtgttcctaacactaacatcccttcttttcttaaactcactactgattatt |
2964515 |
T |
|
| Q |
304 |
ttggttattacaataaatcaaaattggattttgataagggtgatattagtataaggcacttcactgatctgattaggatatttcatttgccacatcctat |
403 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
2964516 |
ttgattattacaataaatcaaaattggattttgataagggtgatattagtataaggcacttcactgatctgattaggatatttcatttgcaacatcctat |
2964615 |
T |
|
| Q |
404 |
tgaaagtcagacgcgtagataccagttcggcctacagatgatacaactacggagtgcaactgagttgttagaagctggagttaggtttaaagtgaacact |
503 |
Q |
| |
|
||||| || | || ||||| || | || | |||||| ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2964616 |
tgaaaatcggccgagtagagacaacatcaacaaacagataatacatctacctagtgcaactgagttgttagaagctggagttaggtttaaagtgaacact |
2964715 |
T |
|
| Q |
504 |
gaaagtga---tttacttgaatggaggttttcgggaggagttcttgaaattcctcaattattagttggggatggcaccgaatctttatttcggaatatga |
600 |
Q |
| |
|
|||||| | ||||||||| | ||||||||||||||||||||||||||||||||||||| ||| | ||||| |||||| | | |||||||||||| |
|
|
| T |
2964716 |
gaaagtaagtgtttacttgacttgaggttttcgggaggagttcttgaaattcctcaattaatagctcacgatgggaccgaaattatgtttcggaatatgg |
2964815 |
T |
|
| Q |
601 |
ttgctttggagcagtgtcattacccttatgagtcctatattcttgattatgttactattatggatttccttataaatactggtaaggacgcggacatact |
700 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||| |||||| ||| |||||| || || |||||| ||||||||||||||| ||||| | ||| ||||| |
|
|
| T |
2964816 |
ttgctttggagcagtgtcgttacccttatgagtcatatattactgactatgttgctgttttggattaccttataaatactggcaaggatgtggatatact |
2964915 |
T |
|
| Q |
701 |
tattcagaaagaaatactggaaaattggtttggagacaatcattctgtggctaacatgtttaatggtctttgcaaaaatattatacattctaatatcagt |
800 |
Q |
| |
|
| ||||||| |||||||||||||| | ||||||| | | |||||||||||||| ||||||||||||||| |||| || |||||||||||||||||||| |
|
|
| T |
2964916 |
tgttcagaacaaaatactggaaaatatgcttggagatagtgattctgtggctaacttgtttaatggtctttccaaatatgttatacattctaatatcagt |
2965015 |
T |
|
| Q |
801 |
tctcaattctctattctatgcaaagacttaaatgctttttgtaagaatccttggc--------at----------aggttgaaggctactctcaggcgtg |
882 |
Q |
| |
|
||||||||||||||| |||||||| || |||||||||||| ||||||||||| || | ||||||| | ||||| | ||||| |
|
|
| T |
2965016 |
cttcaattctctattctttgcaaagatttgaatgctttttgtgggaatccttggcgccagttaatgttgacgttgaagttgaagtccactctgatgcgtg |
2965115 |
T |
|
| Q |
883 |
attattgcaatactccttggcacactgctgcttccgttgcgggaattttactacttgttctcactttacttcaatcagtttgttc |
967 |
Q |
| |
|
|||| |||| |||||||||||| ||||||||||| |||| ||||| ||||||||||||||||||||| ||||| |||||||||| |
|
|
| T |
2965116 |
attactgcagtactccttggcaagctgctgcttcctttgctggaatcttactacttgttctcactttaattcaaacagtttgttc |
2965200 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 387; E-Value: 0
Query Start/End: Original strand, 444 - 984
Target Start/End: Original strand, 2929456 - 2930000
Alignment:
| Q |
444 |
atacaactacggagtgcaactgagttgttagaagctggagttaggtttaaagtgaacactgaaagtga---tttacttgaatggaggttttcgggaggag |
540 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||||||||| | |||||||| ||||||| |
|
|
| T |
2929456 |
atacaactacggagtgcaactgagttgttagaagctggagttaggtttaaagtgaacactaaaagtaagtgtttacttgacttaaggttttcaggaggag |
2929555 |
T |
|
| Q |
541 |
ttcttgaaattcctcaattattagttggggatggcaccgaatctttatttcggaatatgattgctttggagcagtgtcattacccttatgagtcctatat |
640 |
Q |
| |
|
|||||||||||||||||||| ||||| ||||| |||||| |||||||| |||||||||||||||||||||||| |||||||||| ||||||| ||||| |
|
|
| T |
2929556 |
ttcttgaaattcctcaattaacagttgcagatgggaccgaaactttattttggaatatgattgctttggagcagtttcattaccctcatgagtcatatat |
2929655 |
T |
|
| Q |
641 |
tcttgattatgttactattatggatttccttataaatactggtaaggacgcggacatacttattcagaaagaaatactggaaaattggtttggagacaat |
740 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2929656 |
tcttgattatgttactattatggattttcttataaatactggtaaggacgccgatatacttattcagaaagaaatactggaaaattggtttggagacaat |
2929755 |
T |
|
| Q |
741 |
cattctgtggctaacatgtttaatggtctttgcaaaaatattatacattctaatatcagttctcaattctctattctatgcaaagacttaaatgcttttt |
840 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
2929756 |
cattctgtggctaacatgtttaatggtttttgcaaatatattatacattctaatatcagtcctcatttctctattctatgcaaagacttaaatgcttttt |
2929855 |
T |
|
| Q |
841 |
gtaagaatccttggcataggttgaaggctactctcaggcgtgattattgcaatactccttggcacactgctgcttccgttgcgggaattttactacttgt |
940 |
Q |
| |
|
|| |||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| |||||||||||| |||| ||| | ||||||||| | |
|
|
| T |
2929856 |
gttagaatccttggcataggttgaaggctactctcaggcgtgattattgaagtactccttggcaaactgctgcttccattgctggattcttactactttt |
2929955 |
T |
|
| Q |
941 |
tctcactttacttcaatcagtttgttcagtc-tgcaagtagtaca |
984 |
Q |
| |
|
||||||||||||||||||||||||||| ||| ||||||| ||||| |
|
|
| T |
2929956 |
tctcactttacttcaatcagtttgttctgtcttgcaagttgtaca |
2930000 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 385; E-Value: 0
Query Start/End: Original strand, 16 - 967
Target Start/End: Original strand, 2951670 - 2952609
Alignment:
| Q |
16 |
atttcaaacgctgttattctgaaaccttactattttctcaagatgaacttgttaagttagtcttaatcgattcttgttttataattcaaatttttcggaa |
115 |
Q |
| |
|
|||||||| | ||||||||||||||| ||| ||||||||| |||||||||||||||||| ||||||||||||| ||||||||||||| ||||| ||| |
|
|
| T |
2951670 |
atttcaaaagttgttattctgaaaccctaccattttctcatgatgaacttgttaagttaatcttaatcgattccgcttttataattcaacttttttggac |
2951769 |
T |
|
| Q |
116 |
atattatcatggtgggtttccctttaaaccatggttagccaatggtataatacaagatttattgttacttgaaaatcagcttccctttttcgttattgaa |
215 |
Q |
| |
|
|| | | ||| ||| | ||||||||| ||||||| | |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2951770 |
atcctgttatgaaggggagctctttaaaccttggttaggtactggtataatacacgatttatggttacttgaaaatcagcttccctttttcgttattgaa |
2951869 |
T |
|
| Q |
216 |
aaaatttacagtctttcattcagttctacgaaagctagtgttcctaacactgcaatcccttcttttcttaaactcactattcattattttggttattaca |
315 |
Q |
| |
|
|||||||||||||||||||| | ||| |||||||| |||| |||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2951870 |
aaaatttacagtctttcattga------------ctaatgttcctatcactatgatccattcttttcttaaactcactattcattattttggttattaca |
2951957 |
T |
|
| Q |
316 |
ataaatcaaaattggattttgataagggtgatattagtataaggcacttcactgatctgattaggatatttcatttgccacatcctattgaaagtcagac |
415 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | | |
|
|
| T |
2951958 |
ataaatcaaaattggattttgataagggtgatattagtataaggcacttcactgatctgattaggatatttcatttgcaacatcctattgaaagtcggcc |
2952057 |
T |
|
| Q |
416 |
gcgtagataccagttcggcctacagatgatacaactacggagtgcaactgagttgttagaagctggagttaggtttaaagtgaacactgaaagtga---t |
512 |
Q |
| |
|
| |||| |||| | | ||| | ||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | |
|
|
| T |
2952058 |
gagtag-----agtt-gtagaatggataaaacatctaccgagtgcaactgagttgttagaagctggagttaggtttaaagtgaacactgaaagtaagtgt |
2952151 |
T |
|
| Q |
513 |
ttacttgaatggaggttttcgggaggagttcttgaaattcctcaattattagttggggatggcaccgaatctttatttcggaatatgattgctttggagc |
612 |
Q |
| |
|
|||||||| | ||||||||||| ||||||||||||||||||||||||| |||| |||| |||||| ||||||||||||||||| |||||||||||| |
|
|
| T |
2952152 |
ttacttgacttgaggttttcggaaggagttcttgaaattcctcaattaaaagttcaggattcaaccgaaactttatttcggaatatggttgctttggagc |
2952251 |
T |
|
| Q |
613 |
agtgtcattacccttatgagtcctatattcttgattatgttactattatggatttccttataaatactggtaaggacgcggacatacttattcagaaaga |
712 |
Q |
| |
|
|||||||||||||| | ||||| |||||| |||||||||| | || |||||| | ||||||||||||||| || | ||| |||||| ||| || || |
|
|
| T |
2952252 |
agtgtcattaccctgaggagtcatatattgctgattatgttgttgttttggattacattataaatactggtaccgatgtggatatacttgttcggaggga |
2952351 |
T |
|
| Q |
713 |
aatactggaaaattggtttggaga---caatcattctgtggctaacatgtttaatggtctttgcaaaaatattatacattctaatatcagttctcaattc |
809 |
Q |
| |
|
||||| || ||| | ||||||| | | ||||||||||||||| |||||||||| ||||||||||| || || ||||||||||||||||||||||| |
|
|
| T |
2952352 |
tatactagataatatgcttggagaaagtagtgattctgtggctaacaggtttaatggtatttgcaaaaatgttgtatattctaatatcagttctcaattc |
2952451 |
T |
|
| Q |
810 |
tctattctatgcaaagacttaaatgctttttgtaagaatccttggcataggttgaaggctactctcaggcgtgattattgcaatactccttggcacactg |
909 |
Q |
| |
|
|||||| | ||||||| ||||||| ||||||| ||||||||| ||| |||||| || ||||| |||||||||||| |||| ||||||||||| |||| |
|
|
| T |
2952452 |
tctattattggcaaagaaataaatgcattttgtagtaatccttggaataagttgaaagccactctgaggcgtgattatggcaaaactccttggcaaactg |
2952551 |
T |
|
| Q |
910 |
ctgcttccgttgcgggaattttactacttgttctcactttacttcaatcagtttgttc |
967 |
Q |
| |
|
|||||||| |||| ||||| |||| |||| |||||||||||||||| |||||||||| |
|
|
| T |
2952552 |
ctgcttccattgctggaatcgtactccttgctctcactttacttcaaacagtttgttc |
2952609 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 339; E-Value: 0
Query Start/End: Original strand, 170 - 984
Target Start/End: Original strand, 2973895 - 2974698
Alignment:
| Q |
170 |
agatttattgttacttgaaaatcagcttccctttttcgttattgaaaaaatttacagtctttcattcagttctacgaaagctagtgttcctaacactgca |
269 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | | |||||||||||| |
|
|
| T |
2973895 |
agatttattgttacttgaaaatcagcttccctttttcgttattgaaaaaatttacagtatttcattgact---------------gttcctaacactatg |
2973979 |
T |
|
| Q |
270 |
atcccttcttttcttaaactcactattcattattttggttattacaataaatcaaaattggattttgataagggtgatattagtataaggcacttcactg |
369 |
Q |
| |
|
|||| |||||||||||||||||||||| ||| ||| | || ||||||| ||||||||| ||||||||| |||||||||||||| |||||||| || |
|
|
| T |
2973980 |
atccattcttttcttaaactcactattgcttactttcaatgtttcaataaaccaaaattgggttttgataacaatgatattagtataatgcacttcaatg |
2974079 |
T |
|
| Q |
370 |
atctgattaggatatttcatttgccacatcctattgaaagtcagacgcgtagataccagttcggcctacagatgatacaactacggagtgcaactgagtt |
469 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||| | || ||||| | ||| ||| ||| || ||||| |||| ||||||||||||||| |
|
|
| T |
2974080 |
atctgattaggatatttcatttgaaacatcctattgaaagtaggccgagtagagagcagatcgatgaacaaataatacatctaccgagtgcaactgagtt |
2974179 |
T |
|
| Q |
470 |
gttagaagctggagttaggtttaaagtgaacactgaaagtga---tttacttgaatggaggttttcgggaggagttcttgaaattcctcaattattagtt |
566 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||| ||||| ||| | ||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
2974180 |
gttagaagctggagttaggtttaaagtgaacactaaaagtgaatgtttacatgacttgaggttttcgggaggagttcttgaaattcctcaattaacagtt |
2974279 |
T |
|
| Q |
567 |
ggggatggcaccgaatctttatttcggaatatgattgctttggagcagtgtcattacccttatgagtcctatattcttgattatgttactattatggatt |
666 |
Q |
| |
|
||||| |||||| ||| |||||||||||| ||||||||||||||||||||||||||||| |||| |||||| |||||||| | |||| |||||| |
|
|
| T |
2974280 |
caagatgggaccgaaattttgtttcggaatatggttgctttggagcagtgtcattacccttatcagtcatatattattgattatcattttattttggatt |
2974379 |
T |
|
| Q |
667 |
tccttataaatactggtaaggacgcggacatacttattcagaaagaaatactggaaaattggtttggagacaatcattctgtggctaacatgtttaatgg |
766 |
Q |
| |
|
||||||||||||| ||| ||| | ||| |||||| ||| || | |||||| |||||||| ||||||||| | ||||||| |||| | | |||||||| |
|
|
| T |
2974380 |
accttataaatactagtacggatgtggatatacttgttcggagcaatatactgcaaaattggcttggagacagtgattctgttgctatcttatttaatgg |
2974479 |
T |
|
| Q |
767 |
tctttgcaaaaatattatacattctaatatcagttctcaattctctattctatgcaaagacttaaatgctttttgtaagaatccttggcataggttgaag |
866 |
Q |
| |
|
|||| | ||||||||| | ||||||||||||||||||| ||||||||||| |||||||| || ||||||| ||||| |||||||||||||||||||||| |
|
|
| T |
2974480 |
tcttggagaaaatattacaaattctaatatcagttctcatttctctattctttgcaaagaattgaatgcttattgtaggaatccttggcataggttgaag |
2974579 |
T |
|
| Q |
867 |
gctactctcaggcgtgattattgcaatactccttggcacactgctgcttccgttgcgggaattttactacttgttctcactttacttcaatcagtttgtt |
966 |
Q |
| |
|
||| |||| |||||||||||||||||||||||||||||||||||||||||| |||| |||||||| ||||||||||||||| || ||||| |||||||| |
|
|
| T |
2974580 |
gctgctctaaggcgtgattattgcaatactccttggcacactgctgcttccattgctggaatttttctacttgttctcactataattcaaagagtttgtt |
2974679 |
T |
|
| Q |
967 |
cagtc-tgcaagtagtaca |
984 |
Q |
| |
|
| ||| ||||||||||||| |
|
|
| T |
2974680 |
ctgtcttgcaagtagtaca |
2974698 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 323; E-Value: 0
Query Start/End: Original strand, 7 - 984
Target Start/End: Complemental strand, 2659362 - 2658360
Alignment:
| Q |
7 |
acttacctcatttcaaacgctgttattctgaaaccttactattttctcaagatgaacttgttaagttagtcttaatcgattcttgttttataattcaaat |
106 |
Q |
| |
|
||||| ||| ||||||| | |||||||| |||||| ||| ||||||| | ||||||||||||||||| ||||||||||||| ||||||||||||||| | |
|
|
| T |
2659362 |
acttatctcgtttcaaaagttgttattccgaaaccctaccattttctgataatgaacttgttaagttaatcttaatcgattcctgttttataattcaact |
2659263 |
T |
|
| Q |
107 |
ttttcggaaata---ttatcatggtgggtttccctttaaaccatggttagccaatggtataatacaagatttattgttacttgaaaatcagcttcccttt |
203 |
Q |
| |
|
|||| ||| ||| |||| ||| |||||||| |||||||| ||||||| |||||||| | |||||||||||||||||||||||||||||||||| |
|
|
| T |
2659262 |
tttttggacatactattatgatgatgggtttctatttaaaccttggttagatgatggtatagcattagatttattgttacttgaaaatcagcttcccttt |
2659163 |
T |
|
| Q |
204 |
ttcgttattgaaaaaatttacagtctttcattcagttctacgaaagctagtgttcctaacactgcaatcccttcttttcttaaactcactattcattatt |
303 |
Q |
| |
|
|||||||||||| ||||||||| ||||||| |||||||| || |||||||||||||| ||| | |||||| ||||||| ||||||||||| | |||| |
|
|
| T |
2659162 |
ttcgttattgaagaaatttacaaactttcatcgagttctacaaatgctagtgttcctaagactacgatccctggttttcttgaactcactattaaatatt |
2659063 |
T |
|
| Q |
304 |
ttggttattacaataaatcaaaattggattttgataagggtgatattagtataaggcacttcactgatctgattaggatatttcatttgccacatcctat |
403 |
Q |
| |
|
|| || || |||||||||||| ||| ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| || |||||| |
|
|
| T |
2659062 |
tttattcttccaataaatcaaacttgttttttgataatggtgatattagtataatgcacttcactgatctgattaggatatttcatttgcaacttcctat |
2658963 |
T |
|
| Q |
404 |
tgaaagtcagacgcgtagataccagttcggcctacagatgatacaactacggagtgcaactgagttgttagaagctggagttaggtttaaagtgaacact |
503 |
Q |
| |
|
||||| || || ||| || | || | || ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
2658962 |
tgaaattcgaccgagtaataacgcgaccgacgaacggatgatacatctaccgagtgcaactgagttgttagaagctggagttaggtttaaagtgagcact |
2658863 |
T |
|
| Q |
504 |
gaaagtga---tttacttgaatggaggttt------tcgggaggagttcttgaaattcctcaattattagttggggatggcaccgaatctttatttcgga |
594 |
Q |
| |
|
||||| | ||||||||| | ||||||| || ||||||||||||||||||||||||||| |||| ||| | || ||| ||| ||||| | |
|
|
| T |
2658862 |
aaaagtaagtgtttacttgacttgaggttttcaaaatcaggaggagttcttgaaattcctcaattaacggttgacgataggactgaaattttgtttcgaa |
2658763 |
T |
|
| Q |
595 |
atatgattgctttggagcagtgtcattacccttatgagtcctatattcttgattatgttactattatggatttccttataaatactggtaaggacgcgga |
694 |
Q |
| |
|
||||| ||||||||||||| |||||||||||||||||||| |||||| |||||||||| || || |||||| ||||||||||||||||||||| | ||| |
|
|
| T |
2658762 |
atatggttgctttggagcaatgtcattacccttatgagtcatatattactgattatgttgctgttttggattaccttataaatactggtaaggatgtgga |
2658663 |
T |
|
| Q |
695 |
catacttattcagaaagaaatactggaaaattggtttggagacaatcattctgtggctaacatgtttaatggtctttgcaaaaatattatacattctaat |
794 |
Q |
| |
|
|||||| ||| || ||||||||||||||||| ||||||||| | |||||||||||||| |||||| |||||||||||||||| ||| |||| |||| |
|
|
| T |
2658662 |
tatacttgttccaaacaaaatactggaaaattggcttggagacagtgattctgtggctaacttgtttactggtctttgcaaaaatgttactcattgtaat |
2658563 |
T |
|
| Q |
795 |
atcagttctcaattctctattctatgcaaagacttaaatgctttttgtaagaatccttggcataggttgaag------------gctactctcaggcgtg |
882 |
Q |
| |
|
| |||| |||| ||| ||||||| || |||||||||| | |||||||| ||||||||||| || ||| ||| | ||||| ||||||| |
|
|
| T |
2658562 |
agcagtcctcatttcactattctttgtgaagacttaaaagatttttgtaggaatccttggcctaagtttaagtactcattgattggcactctgaggcgtg |
2658463 |
T |
|
| Q |
883 |
attattgcaatactccttggcacactgctgcttccgttgcgggaattttactacttgttctcactttacttcaatcagtttgttcagtc-tgcaagtagt |
981 |
Q |
| |
|
||||||||| |||||||||| | ||| ||||||| |||| ||||| ||||||||| |||||||| || ||||| |||||||||| ||| | |||||||| |
|
|
| T |
2658462 |
attattgcagtactccttggaaagctggtgcttcctttgctggaatcttactacttattctcactataattcaaacagtttgttctgtctttcaagtagt |
2658363 |
T |
|
| Q |
982 |
aca |
984 |
Q |
| |
|
||| |
|
|
| T |
2658362 |
aca |
2658360 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 321; E-Value: 0
Query Start/End: Original strand, 342 - 984
Target Start/End: Original strand, 2937505 - 2938151
Alignment:
| Q |
342 |
ggtgatattagtataaggcacttcactgatctgattaggatatttcatttgccacatcctattgaaagtcagacgcgtagataccagttcggcctacaga |
441 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| | || ||||| | | ||| | ||||| |
|
|
| T |
2937505 |
ggtgatattagtataagtcacttcactgatctgattaggatatttcatttgcaacatcctattgaaagtcggccgagtagagaagcgatcgacgaacaga |
2937604 |
T |
|
| Q |
442 |
tgatacaactacggagtgcaactgagttgttagaagctggagttaggtttaaagtgaacactgaaagtgatt---tacttgaatggaggttttcgggagg |
538 |
Q |
| |
|
| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| | ||| ||||| ||||| |
|
|
| T |
2937605 |
taatacatctaccgagtgcaactgagttgttagaagctggagttaggtttaaagtgaacactgaaagtaattgtttacttgacttgagattttcaggagg |
2937704 |
T |
|
| Q |
539 |
agttcttgaaattcctcaattattagttggggatggcaccgaatctttatttcggaatatgattgctttggagcagtgtcattacccttatgagtcctat |
638 |
Q |
| |
|
|||||||||||||||||||||| ||||| |||| |||||| ||| ||| |||||||| |||||||||||||||||||||||||| ||||||| ||| |
|
|
| T |
2937705 |
agttcttgaaattcctcaattaacagttgaggattcgaccgaaattttgttttggaatatggttgctttggagcagtgtcattaccctcatgagtcatat |
2937804 |
T |
|
| Q |
639 |
attcttgattatgttactattatggatttccttataaatactggtaaggacgcggacatacttattcagaaagaaatactggaaaattggtttggagaca |
738 |
Q |
| |
|
||| |||||||||| | || |||||| |||||||||||| |||||||| |||| |||||| || ||| ||||||||||||||||| ||||||||| |
|
|
| T |
2937805 |
attgctgattatgttgttgttttggattaccttataaataccggtaaggatgcgggtatacttgtttggaacaaaatactggaaaattggcttggagaca |
2937904 |
T |
|
| Q |
739 |
atcattctgtggctaacatgtttaatggtctttgcaaaaatattatacattctaatatcagttctcaattctctattctatgcaaagacttaaatgcttt |
838 |
Q |
| |
|
| ||||||||||||| ||||||||||||||||||||||| || || ||||| ||||||||||||||||||||||||| |||||||| ||||||||||| |
|
|
| T |
2937905 |
gtgattctgtggctaatttgtttaatggtctttgcaaaaatgttgtatattctgatatcagttctcaattctctattctttgcaaagaattaaatgcttt |
2938004 |
T |
|
| Q |
839 |
ttgtaagaatccttggcataggttgaaggctactctcaggcgtgattattgcaatactccttggcacactgctgcttccgttgcgggaattttactactt |
938 |
Q |
| |
|
|| | ||||||||||||| ||||||||||||||| |||||||||||| |||| ||||||||||| |||||||||||| |||| ||||| ||||||||| |
|
|
| T |
2938005 |
ctgcagtaatccttggcataagttgaaggctactctgaggcgtgattatggcaaaactccttggcaaactgctgcttccattgctggaatcttactactt |
2938104 |
T |
|
| Q |
939 |
gttctcactttacttcaatcagtttgttcagtc-tgcaagtagtaca |
984 |
Q |
| |
|
|||||||||||||||||||||||||||| ||| ||||||| ||||| |
|
|
| T |
2938105 |
attctcactttacttcaatcagtttgttctgtcttgcaagttgtaca |
2938151 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 267; E-Value: 1e-148
Query Start/End: Original strand, 456 - 984
Target Start/End: Complemental strand, 2997292 - 2996760
Alignment:
| Q |
456 |
agtgcaactgagttgttagaagctggagttaggtttaaagtgaacactgaaagtga---tttacttgaatggaggttttcgggaggagttcttgaaattc |
552 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||| |||| | ||||||||| | |||||||||||||| |||||||||||||| |
|
|
| T |
2997292 |
agtgcaactgagttgttagaagctggagttaagtttaaagtgaacactaaaagcaagtgtttacttgacttgaggttttcgggagaagttcttgaaattc |
2997193 |
T |
|
| Q |
553 |
ctcaattattagttggggatggcaccgaatctttatttcggaatatgattgctttggagcagtgtcattacccttatgagtcctatattcttgattatgt |
652 |
Q |
| |
|
|| ||| | |||| |||| | |||||| ||||||||||||||||| ||||||||||||||| ||||||| || | ||| |||||| ||||||||| |
|
|
| T |
2997192 |
cttcgttaattgttgaggatcggaccgaagctttatttcggaatatggttgctttggagcagtttcattacactaacaagttatatattactgattatgt |
2997093 |
T |
|
| Q |
653 |
tactattatggatttccttataaatactggtaaggacgcggacatacttattcagaaagaaatactggaaaattggtttggagacaatcattctgtggct |
752 |
Q |
| |
|
| || || |||||| ||||||||| ||||||||||| | || |||||| |||| ||||||||||||||||||||| ||||||||| | ||||||||||| |
|
|
| T |
2997092 |
ttctgttttggattaccttataaacactggtaaggatgttgatatacttgttcacaaagaaatactggaaaattggcttggagacagtgattctgtggct |
2996993 |
T |
|
| Q |
753 |
aacatgtttaatggtctttgcaaaaatattatacattctaatatcagttctcaattctctattctatgcaaagacttaaatgctttttgtaagaatcctt |
852 |
Q |
| |
|
||| |||||||||||||||||| |||| || ||||| | |||||||||||||||||||||||||| ||||| ||||||||||||||||||| |||||||| |
|
|
| T |
2996992 |
aacttgtttaatggtctttgcataaatgttgtacataccaatatcagttctcaattctctattctttgcaaggacttaaatgctttttgtaggaatcctt |
2996893 |
T |
|
| Q |
853 |
ggcataggttgaaggctactctcaggcgtgattattgcaatactccttggcacactgctgcttccgttgcgggaattttactacttgttctcactttact |
952 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||| |||| ||||||||||| ||||||||||| |||| |||||| ||||||||||||||||||| | |
|
|
| T |
2996892 |
ggcataagttgaaggctactctcaggcgtgattatggcaagactccttggcaagctgctgcttcctttgctggaattgtactacttgttctcacttttat |
2996793 |
T |
|
| Q |
953 |
tcaatcagtttgttcagtc-tgcaagtagtaca |
984 |
Q |
| |
|
||||||||||||||| ||| ||||||| ||||| |
|
|
| T |
2996792 |
tcaatcagtttgttctgtcttgcaagttgtaca |
2996760 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 273 - 984
Target Start/End: Original strand, 2982839 - 2983557
Alignment:
| Q |
273 |
ccttcttttcttaaactcactattcattattttggttattacaataaatcaaaattggattttgataagggtgatattagtataaggcacttcactgatc |
372 |
Q |
| |
|
|||||||||||| |||||||||| ||||| ||| | | ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
2982839 |
ccttcttttcttgaactcactatccattactttaaaaaattgaataaatcaaaattgtcttttgataatggtgatattagtataaggcacttcactgatc |
2982938 |
T |
|
| Q |
373 |
tgattaggatatttcatttgccacatcctattgaaagtcagacgcgtagataccagttcggcctacagatgatacaactacggagtgcaactgagttgtt |
472 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||| | || ||||| | || ||| || ||| ||||| ||| || ||||||| ||||| | |
|
|
| T |
2982939 |
tgattaggatatttcatttgcaacatcctattgaaagtcggccgagtagagtcaagatcgaaaaacggataatacatatacagactgcaactcagttggt |
2983038 |
T |
|
| Q |
473 |
agaagctggagttaggtttaaagtgaacactgaaagtga---tttacttgaatggaggttttcgggaggagttcttgaaattcctcaattattagttggg |
569 |
Q |
| |
|
||||||||||||||||||| ||||||| ||| ||||| | |||| ||| | ||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
2983039 |
agaagctggagttaggtttcaagtgaaaactaaaagtaagtgtttatatgacttgaggttttcgggaggagttcttgaaattcctcaattaatagttcat |
2983138 |
T |
|
| Q |
570 |
gatggcac---cgaatctttatttcggaatatgattgctttggagcagtgtcattacccttatgagtcctatattcttgattatgttactattatggatt |
666 |
Q |
| |
|
||| | || |||| ||| |||||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||| | || |||||| |
|
|
| T |
2983139 |
gatcggacgaccgaaattttgtttcggaatatgattgctttggagcattgtcattaccctcatgagtcatatattcttgattatgttcttgttttggatt |
2983238 |
T |
|
| Q |
667 |
tccttataaatactggtaaggacgcggacatacttattcagaaagaaatactggaaaattggtttggagacaatcattctgtggctaacatgtttaatgg |
766 |
Q |
| |
|
||||||||||| ||||||||| | ||| ||||||||||||| ||||||| ||||| | | |||||||| ||| ||| |||||| | |||||||||| |
|
|
| T |
2983239 |
accttataaataatggtaaggatgtggatgtacttattcagaagcaaatactagaaaacttgcttggagacggtcaatctatggctatcttgtttaatgg |
2983338 |
T |
|
| Q |
767 |
tctttgcaaaaatattatacattctaatatcagttctcaattctctattctatgcaaagacttaaatgctttttgtaagaatccttggcataggttgaag |
866 |
Q |
| |
|
||||||||||||| || || | ||||| |||||| ||| ||| | ||| | ||| || || ||||||||||||| |||||| || ||| ||||||| |
|
|
| T |
2983339 |
tctttgcaaaaatgttgtaaaatctaaactcagttatcatttcgtaagtctttccaatgaattggatgctttttgtaataatcctaggaataagttgaag |
2983438 |
T |
|
| Q |
867 |
gctactctcaggcgtgattattgcaatactccttggcacactgctgcttccgttgcgggaattttactacttgttctcactttacttcaatcagtttgtt |
966 |
Q |
| |
|
|| |||||||||||||||||| |||||||||||||| | | ||||||||||||||| ||| | |||||||||||||||||| || ||||| ||||||||| |
|
|
| T |
2983439 |
gccactctcaggcgtgattatggcaatactccttggaaaattgctgcttccgttgctggagtcttactacttgttctcactataattcaaacagtttgtt |
2983538 |
T |
|
| Q |
967 |
cagtc-tgcaagtagtaca |
984 |
Q |
| |
|
| ||| ||||| ||||||| |
|
|
| T |
2983539 |
ctgtcttgcaaatagtaca |
2983557 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 165; E-Value: 1e-87
Query Start/End: Original strand, 16 - 400
Target Start/End: Complemental strand, 2997747 - 2997363
Alignment:
| Q |
16 |
atttcaaacgctgttattctgaaaccttactattttctcaagatgaacttgttaagttagtcttaatcgattcttgttttataattcaaatttttcggaa |
115 |
Q |
| |
|
|||||||||| |||||||| |||||| ||| ||||||||| |||||||||||||||||| ||||||||||||| ||||||||||| || |||| || |
|
|
| T |
2997747 |
atttcaaacgttgttattccgaaaccctaccattttctcatgatgaacttgttaagttaatcttaatcgattccggttttataattgaacttttcttgag |
2997648 |
T |
|
| Q |
116 |
atattatcatggtgggtttccctttaaaccatggttagccaatggtataatacaagatttattgttacttgaaaatcagcttccctttttcgttattgaa |
215 |
Q |
| |
|
||| | ||||||||||| |||| ||| ||||| | ||||||||| | | ||||| |||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
2997647 |
ataccactatggtgggtttgtctttgaactttggttcgatgatggtataacaacaaatttaatgttacttgaaaatcaacttccctttttcgttattgaa |
2997548 |
T |
|
| Q |
216 |
aaaatttacagtctttcattcagttctacgaaagctagtgttcctaacactgcaatcccttcttttcttaaactcactattcattattttggttattaca |
315 |
Q |
| |
|
||||||||||||||||||||||||||||| || |||||| |||||||||| ||||||| ||||||| ||||||||||| ||| ||| || || || |
|
|
| T |
2997547 |
aaaatttacagtctttcattcagttctacaaatgctagtaatcctaacactatgatcccttgttttcttgaactcactattaattttttcttttctttca |
2997448 |
T |
|
| Q |
316 |
ataaatcaaaattggattttgataagggtgatattagtataaggcacttcactgatctgattaggatatttcatttgccacatcc |
400 |
Q |
| |
|
|||||||||| ||| ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
2997447 |
ataaatcaaacttgttttttgatgatggtgatattagtataaggcacttcactgatctgattaggatatttcatttgcaacatcc |
2997363 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 87; E-Value: 4e-41
Query Start/End: Original strand, 16 - 234
Target Start/End: Original strand, 2982600 - 2982818
Alignment:
| Q |
16 |
atttcaaacgctgttattctgaaaccttactattttctcaagatgaacttgttaagttagtcttaatcgattcttgttttataattcaaatttttcggaa |
115 |
Q |
| |
|
||||||||| ||||||||||||| || ||| ||||||||| ||||||||||||||||| ||||||||||||| ||||||||||||| ||||| ||| |
|
|
| T |
2982600 |
atttcaaacactgttattctgaacccctaccattttctcataatgaacttgttaagttaatcttaatcgattccgcttttataattcaacttttttggag |
2982699 |
T |
|
| Q |
116 |
atattatcatggtgggtttccctttaaaccatggttagccaatggtataatacaagatttattgttacttgaaaatcagcttccctttttcgttattgaa |
215 |
Q |
| |
|
| | ||| |||||||| || |||| |||| |||||| | | |||| || | ||| || |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2982700 |
aaaatattatggtggggctctctttcaaccttggttaaaaagtcttatattatatgatgtactgttacttgaaaatcagcttccctttttcgttattgaa |
2982799 |
T |
|
| Q |
216 |
aaaatttacagtctttcat |
234 |
Q |
| |
|
||||||||||||| ||||| |
|
|
| T |
2982800 |
aaaatttacagtcgttcat |
2982818 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 458 - 598
Target Start/End: Original strand, 2978408 - 2978550
Alignment:
| Q |
458 |
tgcaactgagttgttagaagctggagttaggtttaaagtgaacactgaaagtga---tttacttgaatggaggttttcgggaggagttcttgaaattcct |
554 |
Q |
| |
|
||||||||| ||||||||||||||| |||||||||||||||||||| ||||||| ||||||||| | ||||||||||||||||||||||||||||||| |
|
|
| T |
2978408 |
tgcaactgaattgttagaagctgga-ttaggtttaaagtgaacactaaaagtgagtgtttacttgatttgaggttttcgggaggagttcttgaaattcct |
2978506 |
T |
|
| Q |
555 |
caattattagttggggatggcaccgaatctttatttcggaatat |
598 |
Q |
| |
|
|||||| ||||| |||||| |||||| ||| |||||| |||| |
|
|
| T |
2978507 |
caattaagagttgaggatgggaccgaaattttgtttcggtatat |
2978550 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 595 - 928
Target Start/End: Original strand, 2979192 - 2979521
Alignment:
| Q |
595 |
atatgattgctttggagcagtgtcattacccttatgagtcctatattcttgattatgttactattatggatttccttataaatactggtaaggacgcgga |
694 |
Q |
| |
|
||||| ||||||||||||||||| |||||||| ||||||| |||||| |||||||||| | | |||| |||||||||||| |||| ||| | ||| |
|
|
| T |
2979192 |
atatggttgctttggagcagtgttattaccctcatgagtcatatattactgattatgttg---tcttcgattaccttataaataccggtacggatgtgga |
2979288 |
T |
|
| Q |
695 |
catacttattcagaaagaaatactggaaaattggtttggagacaatcattctgtggctaacatgtttaatggtctttgcaaaaatattatacattctaat |
794 |
Q |
| |
|
|||||| ||| || ||||||||||||||| | ||||||||| |||||||| ||||| ||||||||| ||||||| ||||| ||| || |
|
|
| T |
2979289 |
tatacttgttcggagcaaaatactggaaaatttgcttggagacagtcattctgctgctaaattgtttaatgatctttgcgaaaatgtta---------at |
2979379 |
T |
|
| Q |
795 |
atcagttctcaattctctattctatgcaaagacttaaatgctttttgtaagaatccttggcat------aggttgaaggctactctcaggcgtgattatt |
888 |
Q |
| |
|
||||||||||| ||||||||||| |||||||| ||||||| ||||| || |||||||||||| | ||||||||| ||||||||| |||| || |
|
|
| T |
2979380 |
atcagttctcatttctctattctttgcaaagatttaaatgatttttatagtaatccttggcatgagttgaacttgaaggcttctctcaggcatgatcgtt |
2979479 |
T |
|
| Q |
889 |
gcaatac--tccttggcacactgctgcttccgttgcgggaat |
928 |
Q |
| |
|
||||||| |||| |||| | ||||||||||||||| ||||| |
|
|
| T |
2979480 |
gcaatacgatcctaggcaaattgctgcttccgttgctggaat |
2979521 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 661 - 737
Target Start/End: Original strand, 2985695 - 2985771
Alignment:
| Q |
661 |
tggatttccttataaatactggtaaggacgcggacatacttattcagaaagaaatactggaaaattggtttggagac |
737 |
Q |
| |
|
|||||| ||||||||||||| ||||||| ||||| |||||| ||||||| |||||||||||||||||||| ||||| |
|
|
| T |
2985695 |
tggattaccttataaatactagtaaggatgcggatatacttgttcagaaccaaatactggaaaattggtttcgagac |
2985771 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 819 - 878
Target Start/End: Original strand, 2954666 - 2954725
Alignment:
| Q |
819 |
tgcaaagacttaaatgctttttgtaagaatccttggcataggttgaaggctactctcagg |
878 |
Q |
| |
|
|||||||| |||||||||||||||| ||||||||||| || ||||||||||||||||||| |
|
|
| T |
2954666 |
tgcaaagaattaaatgctttttgtaggaatccttggcgtaagttgaaggctactctcagg |
2954725 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 101
Target Start/End: Original strand, 2973741 - 2973826
Alignment:
| Q |
16 |
atttcaaacgctgttattctgaaaccttactattttctcaagatgaacttgttaagttagtcttaatcgattcttgttttataatt |
101 |
Q |
| |
|
|||||||| |||||||||| ||||| || ||||||||| |||||||||||||||| | ||||| ||||| ||||||||||| |
|
|
| T |
2973741 |
atttcaaaggctgttattccaaaaccctatcattttctcatattgaacttgttaagttaattttaatggattccggttttataatt |
2973826 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0024 (Bit Score: 346; Significance: 0; HSPs: 4)
Name: scaffold0024
Description:
Target: scaffold0024; HSP #1
Raw Score: 346; E-Value: 0
Query Start/End: Original strand, 275 - 984
Target Start/End: Complemental strand, 35342 - 34629
Alignment:
| Q |
275 |
ttcttttcttaaactcactattcattattttggttattacaataaatcaaaattggattttgataagggtgatatt-agt--ataaggcacttcactgat |
371 |
Q |
| |
|
|||||||||| ||||||||||| |||||||| |||| |||| |||||||||||| ||||||||| | ||| | ||| |||||||||||||||||| |
|
|
| T |
35342 |
ttcttttcttgaactcactattaattattttcaatatttcaatcaatcaaaattggtttttgataa---taatagtcagtgcataaggcacttcactgat |
35246 |
T |
|
| Q |
372 |
ctgattaggatatttcatttgccacatcctattgaaagtcagacgcgtagataccagttcggcctacagatgatacaactacggagtgcaactgagttgt |
471 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||| | ||||| || || ||| | |||||| ||||| |||| |||||||||| |||||| |
|
|
| T |
35245 |
ctgattaggatatttcatttgcaacatcctattgaaagtcagccaagtagagacaagatcgacgaacagataatacatctaccgagtgcaactcagttgt |
35146 |
T |
|
| Q |
472 |
tagaagctggagttaggtttaaagtgaacactgaaagtga---tttacttgaatggaggttttcgggaggagttcttgaaattcctcaattattagttgg |
568 |
Q |
| |
|
|||||||||||||||||||| ||||||| || ||||||| ||||||||| | | ||||||||| |||||| ||||||||||||| |||| ||||| |
|
|
| T |
35145 |
tagaagctggagttaggtttcaagtgaagcctaaaagtgagtgtttacttgacttggggttttcggaaggagtgcttgaaattcctcgattagaagttga |
35046 |
T |
|
| Q |
569 |
ggatggcaccgaatctttatttcggaatatgattgctttggagcagtgtcattacccttatgagtcctatattcttgattatgttactattatggatttc |
668 |
Q |
| |
|
|||||| |||||| ||| |||||||||||| |||||||||||||||||||||||||||||||||| |||||| |||||||||| | || |||||||| |
|
|
| T |
35045 |
ggatgggaccgaaattttgtttcggaatatggttgctttggagcagtgtcattacccttatgagtcatatattactgattatgttgttgttttggatttc |
34946 |
T |
|
| Q |
669 |
cttataaatactggtaaggacgcggacatacttattcagaaagaaatactggaaaattggtttggagacaatcattctgtggctaacatgtttaatggtc |
768 |
Q |
| |
|
|||||||||||||||||||| ||||| |||||| ||| ||||||||||||| |||| | ||||||||| | |||||||||||||| |||||||| ||| |
|
|
| T |
34945 |
cttataaatactggtaaggatgcggatatacttgttcggaaagaaatactgactaatttgcttggagacagtgattctgtggctaacttgtttaatcgtc |
34846 |
T |
|
| Q |
769 |
tttgcaaaaatattatacattctaatatcagttctcaattctctattctatgcaaagacttaaatgctttttgtaagaatccttggcataggttgaaggc |
868 |
Q |
| |
|
||||||||||| |||||||| ||||||||||||||| ||||||||||| |||||| |||||||||| ||||||| ||||||||| ||||||||||||| |
|
|
| T |
34845 |
tttgcaaaaatgttatacatcataatatcagttctcatttctctattctttgcaaaaacttaaatgcattttgtagtaatccttggaataggttgaaggc |
34746 |
T |
|
| Q |
869 |
tactctcaggcgtgattattgcaatactccttggcacactgctgcttccgttgcgggaattttactacttgttctcactttacttcaatcagtttgttca |
968 |
Q |
| |
|
| ||||||||||||||||| |||| ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
34745 |
ttctctcaggcgtgattatggcaaaactccttggcaaactgctgcttccgttgctggaattttactacttgttctcactttgcttcaatcagtttgttct |
34646 |
T |
|
| Q |
969 |
gtc-tgcaagtagtaca |
984 |
Q |
| |
|
||| ||||||||||||| |
|
|
| T |
34645 |
gtcttgcaagtagtaca |
34629 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0024; HSP #2
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 512 - 771
Target Start/End: Complemental strand, 44791 - 44532
Alignment:
| Q |
512 |
tttacttgaatggaggttttcgggaggagttcttgaaattcctcaattattagttggggatggcaccgaatctttatttcggaatatgattgctttggag |
611 |
Q |
| |
|
||||||||| | ||||||||| | | ||||||||||||||||||||||| || || ||| | ||| ||| ||| | |||||| ||||| ||||| |
|
|
| T |
44791 |
tttacttgatttgaggttttcagaaagagttcttgaaattcctcaattaagagctgatgatcaacctgaaattttgttttgaaatatggttgctatggag |
44692 |
T |
|
| Q |
612 |
cagtgtcattacccttatgagtcctatattcttgattatgttactattatggatttccttataaatactggtaaggacgcggacatacttattcagaaag |
711 |
Q |
| |
|
||| |||||||||| |||| || |||||| || |||||||| ||||| |||||| ||||||||||||||||||||| || || |||| | ||| || |
|
|
| T |
44691 |
tagtatcattaccctaatgaatcatatattattaattatgttgctattttggattaccttataaatactggtaaggatgcagatatacatgttcggagca |
44592 |
T |
|
| Q |
712 |
aaatactggaaaattggtttggagacaatcattctgtggctaacatgtttaatggtcttt |
771 |
Q |
| |
|
||||||||||||||| | ||||||||| ||||| ||||||||| ||||||||| ||||| |
|
|
| T |
44591 |
aaatactggaaaatttgcttggagacagtcattatgtggctaatttgtttaatgatcttt |
44532 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0024; HSP #3
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 16 - 232
Target Start/End: Complemental strand, 35577 - 35361
Alignment:
| Q |
16 |
atttcaaacgctgttattctgaaaccttactattttctcaagatgaa---cttgttaagttagtcttaatcgattcttgttttataattcaaatttttcg |
112 |
Q |
| |
|
|||||||| | |||||||| |||||| || |||| |||| |||||| |||||||||||| ||||||||||||| |||||||||||||| ||||| | |
|
|
| T |
35577 |
atttcaaatgttgttattcggaaaccctatcatttcctcaggatgaagaacttgttaagttaatcttaatcgattccggttttataattcaacttttttg |
35478 |
T |
|
| Q |
113 |
gaaatattatcatggtgggtttccctttaaaccatggttagccaatggtataatacaagatttattgttacttgaaaatcagcttccctttttcgttatt |
212 |
Q |
| |
|
|||||||| | | | | ||||| | |||| ||||||| |||||||| | ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35477 |
gaaatattttaa-gaaagatttcc--tagaaccttggttagatgctggtataagatcagatttattgttacttgaaaatcagcttccctttttcgttatt |
35381 |
T |
|
| Q |
213 |
gaaaaaatttacagtctttc |
232 |
Q |
| |
|
|||||||||||| ||||||| |
|
|
| T |
35380 |
gaaaaaatttacggtctttc |
35361 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0024; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 458 - 503
Target Start/End: Complemental strand, 45168 - 45123
Alignment:
| Q |
458 |
tgcaactgagttgttagaagctggagttaggtttaaagtgaacact |
503 |
Q |
| |
|
||||| |||||||||||||||||||||||||||| |||||| |||| |
|
|
| T |
45168 |
tgcaaatgagttgttagaagctggagttaggtttcaagtgaccact |
45123 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 297; Significance: 1e-166; HSPs: 4)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 297; E-Value: 1e-166
Query Start/End: Original strand, 459 - 985
Target Start/End: Original strand, 3339187 - 3339717
Alignment:
| Q |
459 |
gcaactgagttgttagaagctggagttaggtttaaagtgaacactgaaagtga---tttacttgaatggaggttttcgggaggagttcttgaaattcctc |
555 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||||| ||||||| |||||||| | |||||||||||||||||||||||||||||||| |
|
|
| T |
3339187 |
gcaactgagttgttagaagcaggagttaggtttaaagtgaacactaaaagtgagtgtttacttggcttgaggttttcgggaggagttcttgaaattcctc |
3339286 |
T |
|
| Q |
556 |
aattattagttggggatggcaccgaatctttatttcggaatatgattgctttggagcagtgtcattacccttatgagtcctatattcttgattatgttac |
655 |
Q |
| |
|
||||| ||||| ||||| |||||| ||| |||||||||||| |||||||||||||||||||||||||| ||||||| |||||| ||||||||||| | |
|
|
| T |
3339287 |
aattaacagttgacgatgggaccgaaattttgtttcggaatatggttgctttggagcagtgtcattaccctgatgagtcatatattattgattatgttgc |
3339386 |
T |
|
| Q |
656 |
tattatggatttccttataaatactggtaaggacgcggacatacttattcagaaagaaatactggaaaattggtttggagacaatcattctgtggctaac |
755 |
Q |
| |
|
| || |||||||||||||||||||| ||| ||| | ||| |||||| || ||| |||||||| ||||||||| ||| ||||| | ||||||||||||| |
|
|
| T |
3339387 |
ttttttggatttccttataaatactagtatggatgtggatatacttgttaagagcgaaatactagaaaattggcttgcagacagtgattctgtggctaaa |
3339486 |
T |
|
| Q |
756 |
atgtttaatggtctttgcaaaaatattatacattctaatatcagttctcaattctctattctatgcaaagacttaaatgctttttgtaagaatccttggc |
855 |
Q |
| |
|
||||||||||||||||||||||| |||| ||||||| | | |||||||| ||| ||| ||| ||||||||||||||| |||||||||||||||||||| |
|
|
| T |
3339487 |
ttgtttaatggtctttgcaaaaatgttatgcattctagtgtaagttctcatttccctactcttggcaaagacttaaatgatttttgtaagaatccttggc |
3339586 |
T |
|
| Q |
856 |
ataggttgaaggctactctcaggcgtgattattgcaatactccttggcacactgctgcttccgttgcgggaattttactacttgttctcactttacttca |
955 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| |||| |||||| ||||||||||||||||||||||||| |
|
|
| T |
3339587 |
ataggttgaaggccactctcaggcgtgattattgcaatactccttggcaaactgctgcttccattgctggaattgtactacttgttctcactttacttca |
3339686 |
T |
|
| Q |
956 |
atcagtttgttcagtc-tgcaagtagtacag |
985 |
Q |
| |
|
|||||||||||| ||| |||||||||||||| |
|
|
| T |
3339687 |
atcagtttgttctgtcttgcaagtagtacag |
3339717 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 8 - 110
Target Start/End: Original strand, 3338901 - 3339003
Alignment:
| Q |
8 |
cttacctcatttcaaacgctgttattctgaaaccttactattttctcaagatgaacttgttaagttagtcttaatcgattcttgttttataattcaaatt |
107 |
Q |
| |
|
||||||| |||||||||| |||||||| ||| | || ||||||| | ||| |||||||||||||| ||||||||||||| |||||||||||||| || |
|
|
| T |
3338901 |
cttacctgatttcaaacgttgttattcggaattcctaacattttctgatgataaacttgttaagttaatcttaatcgattccggttttataattcaactt |
3339000 |
T |
|
| Q |
108 |
ttt |
110 |
Q |
| |
|
||| |
|
|
| T |
3339001 |
ttt |
3339003 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 170 - 210
Target Start/End: Original strand, 3339051 - 3339091
Alignment:
| Q |
170 |
agatttattgttacttgaaaatcagcttccctttttcgtta |
210 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3339051 |
agatttattgttacttgaaaatcagcttccctttttcgtta |
3339091 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 370 - 407
Target Start/End: Original strand, 3339092 - 3339129
Alignment:
| Q |
370 |
atctgattaggatatttcatttgccacatcctattgaa |
407 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
3339092 |
atctgattaggatatttcatttgcaacatcctattgaa |
3339129 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 259; Significance: 1e-144; HSPs: 4)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 170 - 970
Target Start/End: Original strand, 49613315 - 49614112
Alignment:
| Q |
170 |
agatttattgttacttgaaaatcagcttccctttttcgttattgaaaaaatttacagtctttcattcagttctacgaaagctagtgttcctaacactgca |
269 |
Q |
| |
|
|||||| ||||||||||||||||| | || ||||| |||||| || ||||||||| ||||||||| | |||||| || ||||||||||| || ||| | |
|
|
| T |
49613315 |
agatttgttgttacttgaaaatcaattgccattttttgttattcaagaaatttacaatctttcatttacttctactaacgctagtgttcccaagactaaa |
49613414 |
T |
|
| Q |
270 |
atcccttcttttcttaaactcactattcattattttggttattacaataaatcaaaattggattttgataagggtgatattagtataaggcacttcactg |
369 |
Q |
| |
|
||||||||||||||| |||| | | || ||||||||| ||||||||| ||||||| |||| ||||||||| || ||| ||||||||||||||||||||| |
|
|
| T |
49613415 |
atcccttcttttcttgaacttagttttgattattttgcatattacaatcaatcaaacttgggttttgataatggcgattttagtataaggcacttcactg |
49613514 |
T |
|
| Q |
370 |
atctgattaggatatttcatttgccacatcctattgaaagtcagacgcgtagataccagttcggcctacagatgatacaactacggagtgcaactgagtt |
469 |
Q |
| |
|
||||||||||||| || || ||| ||||||| | |||| | | ||| |||| | | || |||| ||| |||| ||||||||||||||| |
|
|
| T |
49613515 |
atctgattaggattttccacctgcaacatcctttgcaaagacggccgcttagaa------ttgatgaaccaatgaaacatctacagagtgcaactgagtt |
49613608 |
T |
|
| Q |
470 |
gttagaagctggagttaggtttaaagtgaacactgaaagtga---tttacttgaatggaggttttcgggaggagttcttgaaattcctcaattattagtt |
566 |
Q |
| |
|
|||||||||||| || |||||||||||||||||| ||||||| ||||||||| | ||||||||| ||| | |||||||||||||||||||| |||| |
|
|
| T |
49613609 |
gttagaagctggggtgaggtttaaagtgaacactaaaagtgagtgtttacttgatttgaggttttcaggacgggttcttgaaattcctcaattgaaagtt |
49613708 |
T |
|
| Q |
567 |
ggggatggcaccgaatctttatttcggaatatgattgctttggagcagtgtcattacccttatgagtcctatattcttgattatgttactattatggatt |
666 |
Q |
| |
|
| |||| | || ||| ||| |||||||||||| ||||||||||||| ||||| |||||| ||||||||| ||| ||||||||| || || |||||| |
|
|
| T |
49613709 |
gaggattggactgaaattttgtttcggaatatggttgctttggagcaatgtcactaccctagtgagtcctacattacggattatgttgctgttttggatt |
49613808 |
T |
|
| Q |
667 |
tccttataaatactggtaaggacgcggacatacttattcagaaagaaatactggaaaattggtttggagacaatcattctgtggctaacatgtttaatgg |
766 |
Q |
| |
|
||||||| |||||||| ||||| | ||| |||||| ||||||| ||||||||| |||||| |||| || | | |||||||||||||| |||||||| | |
|
|
| T |
49613809 |
tccttattaatactggcaaggatgtggatatacttgttcagaagaaaatactggtgaattggcttggggatagtgattctgtggctaacttgtttaatag |
49613908 |
T |
|
| Q |
767 |
tctttgcaaaaatattatacattctaatatcagttctcaattctctattctatgcaaagacttaaatgctttttgtaagaatccttggcataggttgaag |
866 |
Q |
| |
|
|||||| |||||| ||| ||||| || |||||||||| | |||||||||||| ||||||| |||| ||||||| | ||||||||||||| |||||| |
|
|
| T |
49613909 |
tctttggaaaaatgttacacatttgtatttcagttctcagtactctattctatgtgaagacttgaatggtttttgtcatgatccttggcatagattgaag |
49614008 |
T |
|
| Q |
867 |
gctactctcaggcgtgattattgcaatactccttggcacactgctgcttccgttgcgggaattttactacttgttctcactttacttcaatcagtttgtt |
966 |
Q |
| |
|
|| |||||||| |||||||||||||| | ||||||||| |||||||||||| |||| ||||||||||||||| ||||| |||||||||||||||||||| |
|
|
| T |
49614009 |
gcgactctcagacgtgattattgcaacagtccttggcaaactgctgcttccattgctggaattttactacttattctctctttacttcaatcagtttgtg |
49614108 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 298 - 967
Target Start/End: Original strand, 49618421 - 49619084
Alignment:
| Q |
298 |
attattttggttattacaataaatcaaaattggattttgataagggtgatattagtataaggcacttcactgatctgattaggatatttcatttgccaca |
397 |
Q |
| |
|
||||||||| |||||| ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
49618421 |
attattttgattatta--ataaatcaaaattggattttgatgacggtgatattagtataaggcacttcactgatctgattaggatatttcatttggaaca |
49618518 |
T |
|
| Q |
398 |
tcctattgaaagtcagacgcgtagatacc------agttcggcctacagatgatacaactacggagtgcaactgagttgttagaagctggagttaggttt |
491 |
Q |
| |
|
|||||||||||| ||| || ||||| | | |||| | | |||||| | |||| || | |||||||||||||||||||||||||||||| |
|
|
| T |
49618519 |
tcctattgaaaggcagccgggtagaatcatcatggacttcgacaaatctatgatatatctacccagcaccactgagttgttagaagctggagttaggttt |
49618618 |
T |
|
| Q |
492 |
aaagtgaacactgaaagtga---tttacttgaatggaggttttcgggaggagttcttgaaattcctcaattattagttggggatggcaccgaatctttat |
588 |
Q |
| |
|
|||||||||||| ||| | ||||||||| | ||||||||| ||| ||||||||||||||||||||||| ||||| ||| | |||| | |||||| |
|
|
| T |
49618619 |
aaagtgaacactaaaactacatgtttacttgacttgaggttttccggacgagttcttgaaattcctcaattaagagttgaggaccggaccgtaactttat |
49618718 |
T |
|
| Q |
589 |
ttcggaatatgattgctttggagcagtgtcattacccttatgagtcctatattcttgattatgttactattatggatttccttataaatactggtaagga |
688 |
Q |
| |
|
|| |||||||| |||||| ||||||||| |||| ||||||||| ||||||| || || || |||||| ||||||||||| |||| ||| |
|
|
| T |
49618719 |
tt-ggaatatggttgctt-----------cattaccctcatgattcctatatttatgattatatttctgttttggattaccttataaatatcggtaggga |
49618806 |
T |
|
| Q |
689 |
cgcggacatacttattcagaaagaaatactggaaaattggtttggagacaatcattctgtggctaacatgtttaatggtctttgcaaaaatattatacat |
788 |
Q |
| |
|
||||| |||||| |||||| || ||||| ||| ||| | ||| ||||| | |||||||||| ||| ||| |||||||||||| |||||| || |||| |
|
|
| T |
49618807 |
tgcggatatacttgttcagagaggaatacaggataatatgcttgcagacagtgattctgtggcaaacttgtataatggtctttggaaaaatgtttcacat |
49618906 |
T |
|
| Q |
789 |
tctaatatcagttctcaattctctattctatgcaaagacttaaatgctttttgtaagaatccttggcataggttgaaggctactctcaggcgtgattatt |
888 |
Q |
| |
|
||| |||||||||| |||| | |||| |||||||| | || ||||||||| ||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
49618907 |
ataaatttcagttctcatttctgtcttcttcctaaagacttga-tggtttttgtaataatccttggcataaactgaaggctactctcaggcgtgattatg |
49619005 |
T |
|
| Q |
889 |
gcaatactccttggcacactgctgcttccgttgcgggaattttactacttgttctcactttacttcaatcagtttgttc |
967 |
Q |
| |
|
||| |||||||||||| |||||||||||| |||| ||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
49619006 |
gcagtactccttggcaaactgctgcttccattgctggaattttactacttgttctctctttacttcaatcagtttgttc |
49619084 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 170 - 235
Target Start/End: Original strand, 49618295 - 49618361
Alignment:
| Q |
170 |
agatttattgtt-acttgaaaatcagcttccctttttcgttattgaaaaaatttacagtctttcatt |
235 |
Q |
| |
|
|||||||||||| |||| ||||||||||||||| ||||||||||||||| ||||||| ||||||||| |
|
|
| T |
49618295 |
agatttattgtttacttcaaaatcagcttccctatttcgttattgaaaatatttacattctttcatt |
49618361 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 861 - 972
Target Start/End: Original strand, 49617650 - 49617755
Alignment:
| Q |
861 |
ttgaaggctactctcaggcgtgattattgcaatactccttggcacactgctgcttccgttgcgggaattttactacttgttctcactttacttcaatcag |
960 |
Q |
| |
|
||||||||||||||||||| ||||| ||||| || | ||||| || |||||||| ||||| ||||||||||||||| |||| ||||||||||||||| |
|
|
| T |
49617650 |
ttgaaggctactctcaggcatgatttttgcactagt---tggca-acagctgcttctgttgctggaattttactacttattct--ctttacttcaatcag |
49617743 |
T |
|
| Q |
961 |
tttgttcagtct |
972 |
Q |
| |
|
||| ||| |||| |
|
|
| T |
49617744 |
tttattctgtct |
49617755 |
T |
|
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