View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4965_high_21 (Length: 258)
Name: NF4965_high_21
Description: NF4965
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4965_high_21 |
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Alignment Details
Target: chr8 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 18 - 252
Target Start/End: Complemental strand, 28233370 - 28233136
Alignment:
| Q |
18 |
atacattgatacaacaaaacggtggcaacatatgatgagaagagttgtaacacaacacgactaattatttacaaatacaaaggaatcggtagttgcggtg |
117 |
Q |
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| T |
28233370 |
atacattgatacaacaaaacggtggcaacatatgatgagaagagttgtaacacaacacgactaattatttacaaatacaaaggaatcggtagttgcggtg |
28233271 |
T |
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| Q |
118 |
gctttagcggtggcggcggcttctcgacagtcacaacaatgttttccggccgtgatggttgacacggacacggcatcgctatgaactttggcacatcatc |
217 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
28233270 |
gctttagcggtggcggcggcttctcgacagtcacaacaatgttttccggccgtgacggttgacacggacatggcatcgctatgaactttggcacatcatc |
28233171 |
T |
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| Q |
218 |
ccctggcatcatcactgaaaaactttctcctctgt |
252 |
Q |
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||||||||||||||||||||||||||||||||||| |
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| T |
28233170 |
ccctggcatcatcactgaaaaactttctcctctgt |
28233136 |
T |
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