View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4965_low_29 (Length: 216)
Name: NF4965_low_29
Description: NF4965
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4965_low_29 |
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Alignment Details
Target: chr2 (Bit Score: 167; Significance: 1e-89; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 1720834 - 1721033
Alignment:
| Q |
1 |
aatttggctcttaaactattttctctgaattgtttataacctgaaattgatttactaacaccttcgcatttgttgcaacggtacatagttgtttctgtga |
100 |
Q |
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| T |
1720834 |
aatttggctcttaaactattttctctgaattgtttataacctgaaattgatttactaacaccttcgcatttgttgcaacggtacatagttgtttttgtag |
1720933 |
T |
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| Q |
101 |
acactaaaaactctcgtttgcaatcactgcaagcaagnnnnnnnccaccagtatgcattgaagttgagctaagtaacttatgataatttaagcaagtacc |
200 |
Q |
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| T |
1720934 |
acactaaaaactctcgtttgcaatcactgcaagcaagtttttttccaccagtatgcattgaagttgagctaagtaacttatgataatttaagcaagtacc |
1721033 |
T |
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