View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4965_low_4 (Length: 555)

Name: NF4965_low_4
Description: NF4965
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4965_low_4
NF4965_low_4
[»] chr7 (45 HSPs)
chr7 (107-544)||(11744113-11744544)
chr7 (1-89)||(7732944-7733032)
chr7 (1-89)||(15712366-15712454)
chr7 (1-88)||(9181534-9181621)
chr7 (1-87)||(25637655-25637741)
chr7 (1-89)||(48248049-48248137)
chr7 (1-97)||(16917705-16917802)
chr7 (1-89)||(11971335-11971423)
chr7 (1-94)||(28687589-28687682)
chr7 (1-89)||(16081300-16081388)
chr7 (4-88)||(27245664-27245748)
chr7 (1-87)||(5745642-5745728)
chr7 (1-89)||(34595229-34595317)
chr7 (1-87)||(14311744-14311830)
chr7 (1-89)||(786783-786871)
chr7 (1-88)||(5334276-5334363)
chr7 (1-87)||(26026775-26026861)
chr7 (1-87)||(26047960-26048046)
chr7 (9-94)||(27245199-27245284)
chr7 (1-89)||(5333881-5333969)
chr7 (1-89)||(7732489-7732577)
chr7 (1-89)||(16081756-16081844)
chr7 (1-87)||(787243-787329)
chr7 (4-83)||(35160660-35160741)
chr7 (1-89)||(2758155-2758243)
chr7 (1-89)||(9181869-9181957)
chr7 (1-89)||(25637198-25637286)
chr7 (1-89)||(39388725-39388813)
chr7 (1-84)||(35161259-35161342)
chr7 (1-95)||(24929765-24929859)
chr7 (1-87)||(28687956-28688041)
chr7 (4-89)||(48247588-48247673)
chr7 (1-89)||(26048403-26048491)
chr7 (1-87)||(26026320-26026406)
chr7 (25-87)||(40669689-40669751)
chr7 (1-90)||(9394187-9394275)
chr7 (1-89)||(5746098-5746185)
chr7 (1-89)||(39136687-39136775)
chr7 (2-89)||(39136991-39137078)
chr7 (1-88)||(34594585-34594672)
chr7 (1-89)||(4477703-4477791)
chr7 (4-87)||(11973862-11973945)
chr7 (42-89)||(49064035-49064082)
chr7 (428-462)||(22484043-22484077)
chr7 (40-89)||(35579381-35579430)
[»] chr4 (55 HSPs)
chr4 (1-98)||(34789374-34789471)
chr4 (1-89)||(21034236-21034324)
chr4 (1-89)||(28465538-28465626)
chr4 (1-89)||(56077781-56077869)
chr4 (1-88)||(54441026-54441113)
chr4 (1-87)||(33777635-33777721)
chr4 (1-89)||(12593025-12593113)
chr4 (1-89)||(14440285-14440373)
chr4 (1-89)||(24851317-24851405)
chr4 (1-89)||(26974284-26974372)
chr4 (1-87)||(41114160-41114246)
chr4 (1-87)||(45839007-45839092)
chr4 (14-89)||(36168801-36168876)
chr4 (2-88)||(1397597-1397683)
chr4 (1-87)||(6616675-6616761)
chr4 (1-87)||(28166007-28166093)
chr4 (1-89)||(41608872-41608960)
chr4 (1-89)||(46736656-46736744)
chr4 (1-88)||(28465083-28465170)
chr4 (1-89)||(33689830-33689918)
chr4 (1-89)||(46737112-46737200)
chr4 (1-88)||(24851923-24852010)
chr4 (1-88)||(54440573-54440660)
chr4 (1-87)||(16214952-16215038)
chr4 (1-87)||(35643558-35643644)
chr4 (1-89)||(19529151-19529239)
chr4 (9-89)||(21034702-21034782)
chr4 (1-88)||(34789840-34789927)
chr4 (1-89)||(12593480-12593568)
chr4 (1-89)||(19528870-19528958)
chr4 (1-89)||(55677415-55677503)
chr4 (1-87)||(34807596-34807682)
chr4 (11-88)||(33778079-33778156)
chr4 (4-89)||(34807117-34807202)
chr4 (1-89)||(45838548-45838636)
chr4 (4-87)||(36168332-36168415)
chr4 (1-87)||(14439831-14439917)
chr4 (1-65)||(17504416-17504480)
chr4 (1-87)||(229616-229702)
chr4 (9-87)||(41608377-41608455)
chr4 (1-89)||(23986521-23986609)
chr4 (1-76)||(35193322-35193397)
chr4 (45-88)||(35644063-35644106)
chr4 (17-88)||(44219377-44219448)
chr4 (1-87)||(229164-229250)
chr4 (1-87)||(6617119-6617205)
chr4 (1-87)||(26974702-26974788)
chr4 (4-98)||(30597979-30598073)
chr4 (43-87)||(40160589-40160633)
chr4 (16-88)||(51641302-51641374)
chr4 (10-87)||(10795777-10795854)
chr4 (15-88)||(24336234-24336307)
chr4 (8-89)||(35193766-35193847)
chr4 (37-89)||(17503975-17504027)
chr4 (1-89)||(51309962-51310050)
[»] chr2 (50 HSPs)
chr2 (1-89)||(11539638-11539726)
chr2 (1-89)||(38008408-38008496)
chr2 (1-89)||(20127737-20127825)
chr2 (1-89)||(33921069-33921157)
chr2 (1-89)||(5560052-5560140)
chr2 (8-88)||(649801-649881)
chr2 (1-89)||(4356213-4356301)
chr2 (1-89)||(4809336-4809424)
chr2 (1-89)||(16952936-16953024)
chr2 (1-89)||(17060907-17060995)
chr2 (1-89)||(43160468-43160556)
chr2 (1-87)||(13315496-13315582)
chr2 (5-87)||(15551136-15551218)
chr2 (1-89)||(62958-63046)
chr2 (1-89)||(6949452-6949540)
chr2 (1-94)||(42192236-42192329)
chr2 (4-89)||(44219645-44219730)
chr2 (1-89)||(42192700-42192788)
chr2 (1-96)||(6949901-6949996)
chr2 (1-89)||(32418603-32418691)
chr2 (1-89)||(38007951-38008039)
chr2 (4-89)||(25336060-25336145)
chr2 (1-89)||(11540095-11540183)
chr2 (1-89)||(13399877-13399964)
chr2 (1-89)||(20128194-20128282)
chr2 (1-89)||(24140131-24140219)
chr2 (1-89)||(44220102-44220190)
chr2 (1-87)||(33920615-33920701)
chr2 (1-98)||(4355747-4355844)
chr2 (1-86)||(16175807-16175892)
chr2 (1-89)||(649528-649616)
chr2 (1-89)||(43216166-43216254)
chr2 (1-87)||(4808882-4808968)
chr2 (1-87)||(15550676-15550762)
chr2 (1-89)||(28143486-28143574)
chr2 (28-87)||(9329915-9329974)
chr2 (1-87)||(63421-63507)
chr2 (9-87)||(9330260-9330338)
chr2 (15-89)||(16953405-16953479)
chr2 (1-87)||(20495196-20495282)
chr2 (1-87)||(43160012-43160098)
chr2 (1-89)||(32418160-32418246)
chr2 (1-89)||(31797234-31797322)
chr2 (4-89)||(14942306-14942391)
chr2 (4-80)||(2190536-2190612)
chr2 (16-87)||(3822924-3822995)
chr2 (42-87)||(9329833-9329879)
chr2 (1-50)||(5035903-5035952)
chr2 (22-87)||(5561018-5561083)
chr2 (56-89)||(17023601-17023634)
[»] chr8 (33 HSPs)
chr8 (1-87)||(18428219-18428305)
chr8 (1-89)||(15256288-15256376)
chr8 (1-89)||(41260272-41260360)
chr8 (1-89)||(5730818-5730906)
chr8 (1-85)||(18049595-18049679)
chr8 (1-88)||(2208716-2208803)
chr8 (1-97)||(34799071-34799168)
chr8 (1-89)||(599955-600043)
chr8 (1-88)||(28254427-28254514)
chr8 (1-87)||(9797184-9797270)
chr8 (1-87)||(35694335-35694421)
chr8 (1-89)||(15255854-15255942)
chr8 (1-89)||(16578553-16578641)
chr8 (1-89)||(28254883-28254971)
chr8 (1-89)||(42035773-42035861)
chr8 (4-89)||(35427272-35427357)
chr8 (1-89)||(7911073-7911161)
chr8 (1-89)||(9796727-9796815)
chr8 (1-96)||(18050048-18050143)
chr8 (4-89)||(16578109-16578194)
chr8 (1-90)||(35693868-35693957)
chr8 (1-89)||(6115568-6115656)
chr8 (1-89)||(34799540-34799628)
chr8 (1-89)||(41260718-41260806)
chr8 (37-87)||(35426845-35426895)
chr8 (4-89)||(599533-599618)
chr8 (4-89)||(7910617-7910702)
chr8 (1-65)||(42036229-42036293)
chr8 (42-87)||(28877387-28877432)
chr8 (1-88)||(5731269-5731356)
chr8 (1-83)||(28876910-28876992)
chr8 (1-89)||(9930113-9930201)
chr8 (15-87)||(18805167-18805238)
[»] chr3 (62 HSPs)
chr3 (1-87)||(49951549-49951635)
chr3 (1-89)||(2051296-2051384)
chr3 (1-89)||(38535310-38535398)
chr3 (1-89)||(41998230-41998318)
chr3 (1-87)||(44676929-44677015)
chr3 (1-87)||(51473313-51473399)
chr3 (1-89)||(43678296-43678384)
chr3 (1-89)||(49720818-49720906)
chr3 (1-89)||(51828415-51828503)
chr3 (1-89)||(14654200-14654288)
chr3 (1-89)||(16701249-16701337)
chr3 (1-86)||(329850-329935)
chr3 (1-86)||(55389609-55389694)
chr3 (1-89)||(47431697-47431785)
chr3 (1-89)||(50662869-50662957)
chr3 (1-88)||(32730846-32730933)
chr3 (1-89)||(46013880-46013968)
chr3 (1-89)||(330293-330381)
chr3 (1-89)||(34104639-34104727)
chr3 (5-77)||(39010482-39010554)
chr3 (1-89)||(51827958-51828046)
chr3 (1-89)||(51828997-51829085)
chr3 (4-88)||(52237277-52237361)
chr3 (1-89)||(52375788-52375876)
chr3 (2-89)||(40275094-40275181)
chr3 (1-87)||(22370599-22370685)
chr3 (4-87)||(16689361-16689444)
chr3 (1-88)||(30513724-30513810)
chr3 (1-96)||(49952003-49952098)
chr3 (1-87)||(40839109-40839195)
chr3 (4-89)||(49720372-49720457)
chr3 (1-89)||(14654646-14654734)
chr3 (9-89)||(25534891-25534971)
chr3 (1-89)||(36701107-36701195)
chr3 (1-89)||(40275551-40275638)
chr3 (9-89)||(41998693-41998773)
chr3 (1-89)||(55390054-55390142)
chr3 (1-87)||(40838655-40838741)
chr3 (1-95)||(44676467-44676561)
chr3 (4-89)||(46013423-46013508)
chr3 (1-94)||(52375323-52375416)
chr3 (1-89)||(43678741-43678829)
chr3 (1-89)||(51828540-51828628)
chr3 (1-88)||(36701553-36701640)
chr3 (1-88)||(52236818-52236905)
chr3 (1-87)||(32730392-32730478)
chr3 (4-89)||(2044272-2044357)
chr3 (1-89)||(33412611-33412699)
chr3 (1-84)||(34105107-34105190)
chr3 (2-89)||(39010076-39010163)
chr3 (1-89)||(38535752-38535840)
chr3 (2-90)||(43222848-43222936)
chr3 (42-89)||(27200189-27200236)
chr3 (42-89)||(49407797-49407844)
chr3 (8-90)||(37076138-37076220)
chr3 (16-65)||(40490743-40490792)
chr3 (4-89)||(51472856-51472941)
chr3 (37-89)||(37075687-37075739)
chr3 (1-89)||(50900984-50901072)
chr3 (42-89)||(49408279-49408326)
chr3 (1-87)||(27199705-27199791)
chr3 (8-88)||(50900534-50900614)
[»] scaffold0097 (2 HSPs)
scaffold0097 (1-89)||(46725-46813)
scaffold0097 (1-89)||(46267-46355)
[»] chr5 (29 HSPs)
chr5 (1-89)||(28290101-28290189)
chr5 (1-89)||(8419077-8419165)
chr5 (1-89)||(18149734-18149822)
chr5 (1-94)||(19291352-19291445)
chr5 (1-89)||(15029766-15029854)
chr5 (10-87)||(14340401-14340478)
chr5 (1-89)||(15115549-15115637)
chr5 (4-86)||(38900648-38900730)
chr5 (1-94)||(38901097-38901190)
chr5 (1-88)||(39083361-39083447)
chr5 (1-89)||(4967228-4967316)
chr5 (1-89)||(32697683-32697771)
chr5 (1-87)||(4966819-4966905)
chr5 (1-87)||(14340867-14340953)
chr5 (1-87)||(21370689-21370775)
chr5 (1-89)||(16752583-16752671)
chr5 (1-89)||(22651768-22651856)
chr5 (8-89)||(10721787-10721868)
chr5 (4-89)||(28289685-28289770)
chr5 (1-89)||(17260677-17260765)
chr5 (1-89)||(21371153-21371241)
chr5 (8-89)||(41834523-41834604)
chr5 (1-89)||(18150181-18150269)
chr5 (1-87)||(20266372-20266458)
chr5 (1-94)||(27307517-27307610)
chr5 (42-88)||(16753068-16753114)
chr5 (8-89)||(27307062-27307143)
chr5 (42-90)||(28494844-28494892)
chr5 (1-65)||(32305843-32305907)
[»] chr1 (49 HSPs)
chr1 (1-89)||(37505068-37505156)
chr1 (1-88)||(34555839-34555926)
chr1 (1-89)||(10279004-10279092)
chr1 (1-87)||(29439379-29439465)
chr1 (1-87)||(21938566-21938652)
chr1 (1-87)||(50305242-50305328)
chr1 (1-89)||(9992155-9992244)
chr1 (1-87)||(37421401-37421488)
chr1 (1-89)||(9992612-9992700)
chr1 (1-89)||(30787255-30787343)
chr1 (1-88)||(10278550-10278637)
chr1 (1-89)||(29438931-29439019)
chr1 (1-88)||(44582516-44582603)
chr1 (1-87)||(17641826-17641912)
chr1 (1-90)||(44954683-44954772)
chr1 (1-89)||(1837506-1837594)
chr1 (1-89)||(16299139-16299226)
chr1 (1-88)||(2867913-2868000)
chr1 (1-88)||(50304441-50304528)
chr1 (1-89)||(30786772-30786861)
chr1 (9-89)||(2868173-2868253)
chr1 (1-85)||(4080026-4080110)
chr1 (1-89)||(8229638-8229726)
chr1 (1-89)||(52335967-52336055)
chr1 (12-95)||(23340178-23340261)
chr1 (1-88)||(50926232-50926319)
chr1 (1-87)||(39485068-39485154)
chr1 (10-88)||(44582059-44582137)
chr1 (1-87)||(45048158-45048244)
chr1 (1-90)||(16298682-16298771)
chr1 (1-89)||(34555380-34555468)
chr1 (4-87)||(6224700-6224783)
chr1 (4-87)||(44954229-44954312)
chr1 (1-87)||(37421163-37421249)
chr1 (13-90)||(23526658-23526735)
chr1 (1-94)||(37505524-37505617)
chr1 (1-89)||(50926698-50926786)
chr1 (4-89)||(29021325-29021410)
chr1 (1-87)||(8230098-8230184)
chr1 (1-89)||(444008-444096)
chr1 (1-89)||(17088596-17088684)
chr1 (45-89)||(44802672-44802716)
chr1 (1-88)||(44291303-44291390)
chr1 (8-87)||(45048599-45048678)
chr1 (1-86)||(25274760-25274845)
chr1 (36-88)||(1744330-1744382)
chr1 (17-89)||(39843497-39843569)
chr1 (7-87)||(50419393-50419473)
chr1 (37-89)||(52235161-52235213)
[»] chr6 (20 HSPs)
chr6 (1-89)||(25472470-25472558)
chr6 (1-87)||(24640642-24640728)
chr6 (1-89)||(5114469-5114557)
chr6 (1-89)||(31573721-31573810)
chr6 (1-89)||(30251149-30251237)
chr6 (1-87)||(25468852-25468938)
chr6 (1-89)||(5120926-5121014)
chr6 (1-89)||(29891537-29891629)
chr6 (11-89)||(31073144-31073222)
chr6 (1-89)||(31574182-31574270)
chr6 (1-89)||(31073599-31073687)
chr6 (18-87)||(31242809-31242878)
chr6 (37-89)||(22534217-22534269)
chr6 (1-89)||(28636293-28636381)
chr6 (1-89)||(29891081-29891169)
chr6 (2-94)||(32836454-32836546)
chr6 (1-89)||(35163644-35163732)
chr6 (36-95)||(30250716-30250775)
chr6 (426-461)||(14721257-14721292)
chr6 (8-87)||(35163187-35163266)
[»] scaffold0712 (2 HSPs)
scaffold0712 (4-89)||(6393-6478)
scaffold0712 (1-87)||(6853-6939)
[»] scaffold0709 (2 HSPs)
scaffold0709 (4-89)||(6411-6496)
scaffold0709 (1-87)||(6871-6957)
[»] scaffold0007 (2 HSPs)
scaffold0007 (1-89)||(210794-210882)
scaffold0007 (1-88)||(205824-205911)


Alignment Details
Target: chr7 (Bit Score: 241; Significance: 1e-133; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 107 - 544
Target Start/End: Complemental strand, 11744544 - 11744113
Alignment:
Q  107 atgattaaattatctcaccgaatcaaatatcacaattcaaggcttgtattgttcaaaaattattcaaggcttgttaatatttctgacaatatttaccctc 206  Q
    |||||||| ||||||||||||||||||||||| |||||||||  | ||||||||||||||||||        |||||||||||||||||||||| |||||    
T  11744544 atgattaatttatctcaccgaatcaaatatcataattcaagggctctattgttcaaaaattatt--------gttaatatttctgacaatattttccctc 11744453  T
Q  207 agnnnnnnnnnn-tttctgacaatatt-cttcaaaggattaatttaaatatttgctcaattaattccttttatgaagacacgtgaactagcaagattttg 304  Q
    |            |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  11744452 aaaaaaaaaaaaatttctgacaatatttcttcaaaggattaatttaaatatttgctcaattaattccttttgtgaagacacgtgaactagcaagattttg 11744353  T
Q  305 caaccatatactatactgaagtaaacatgataattaatcaaatatggttcagatctgagaaccacgaatataaacacagacatcaaacacgacaccaaca 404  Q
    ||||||||||||||| |||||||||||||||||||||| ||||||| ||||||| |||||  || ||||||| |||||||||||| || ||||| |||||    
T  11744352 caaccatatactatattgaagtaaacatgataattaattaaatatgcttcagatttgagacgcatgaatatagacacagacatcagacgcgacatcaaca 11744253  T
Q  405 ctaatatgccgataccattaataagaaaattgcataattcactataattatatgtgtccgaattgtgtcggtgttagaaacgatacatatcccacaccga 504  Q
    ||||||   ||||||||||||||||||||||| |||||||| | |||||||||||||| | ||||||||||||| |||||||||||||||||||||||||    
T  11744252 ctaatacatcgataccattaataagaaaattgtataattcagtgtaattatatgtgtctgtattgtgtcggtgtcagaaacgatacatatcccacaccga 11744153  T
Q  505 aatacgctaaatctaaggagtgttcatgcttcacaggttc 544  Q
    ||| ||||||||||||||||||||||| ||||| ||||||    
T  11744152 aatgcgctaaatctaaggagtgttcatacttcataggttc 11744113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 7732944 - 7733032
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7732944 tagtttaaggacgattttgttcgatttaaaaaagataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 7733032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 15712454 - 15712366
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  15712454 tagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 15712366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 9181621 - 9181534
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 88  Q
    ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  9181621 tagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 9181534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 25637655 - 25637741
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 87  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  25637655 tagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 25637741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 48248049 - 48248137
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||||||||||||||||||||||||||||| |||||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  48248049 tagtttaaggacgattttgttcgatttaaaaaagataggaccatttttgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 48248137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 16917802 - 16917705
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag-ctaaaatat 97  Q
    ||||||||||| ||||||||||||||||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  16917802 tagtttaaggaggattttgttcgatttaaaaaagatatgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagcctaaaatat 16917705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 11971423 - 11971335
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||||||||||| |||||||||||||||||||||||| |||||||||    
T  11971423 tagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagtaggtcaaaatggtaggaccaaaagtataattaagc 11971335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 28687682 - 28687589
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagctaaaa 94  Q
    |||||||||||||||||||||||||||| |||| |||| | |||||||||||||||||||||||| || |||||||||||||||||||| ||||    
T  28687682 tagtttaaggacgattttgttcgatttataaaagatagaaccattttcgtgagttggtcaaaatgatatgaccaaaagtgtaattaagccaaaa 28687589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 16081388 - 16081300
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||| | ||||||||||||||| | ||||||||||||||||||||||    
T  16081388 tagtttaaggacgattttgttcgatttaaaaaagataggaccatttccatgagttggtcaaaatagaaggaccaaaagtgtaattaagc 16081300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 27245664 - 27245748
Alignment:
Q  4 tttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 88  Q
    |||||||||||||||||||||||||||||| |||||| ||||||||||||||| ||||||||||| |||||||||| ||||||||    
T  27245664 tttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttgatcaaaatggtaagaccaaaagtataattaag 27245748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 5745728 - 5745642
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 87  Q
    ||||||||| | ||||||||||||||||||||| ||| || |||||||||||||||||||||||| |||||||||||||||||||||    
T  5745728 tagtttaagaaagattttgttcgatttaaaaaagatatgaccattttcgtgagttggtcaaaatgataggaccaaaagtgtaattaa 5745642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 34595229 - 34595317
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||| ||||||||||||||||||||||| ||  |||| ||||||||||||||||||||||||  ||||||||||||||||||||||    
T  34595229 tagtttagggacgattttgttcgatttaaaagatgcaggaccattttcgtgagttggtcaaaatgtgaggaccaaaagtgtaattaagc 34595317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 14311744 - 14311830
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 87  Q
    |||||||| |||||||||||||||||||||||| |||||| |||||| |||||||||||||| ||||| ||| ||||||||||||||    
T  14311744 tagtttaaagacgattttgttcgatttaaaaaagataggaccatttttgtgagttggtcaaattggtacgacaaaaagtgtaattaa 14311830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 786871 - 786783
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    |||||||||||  ||||||||||||||||||||  || || ||||||||||||||||||||||||| |||| |||||||||||||||||    
T  786871 tagtttaaggaaaattttgttcgatttaaaaaaggtatgaccattttcgtgagttggtcaaaatggaaggatcaaaagtgtaattaagc 786783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 5334276 - 5334363
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 88  Q
    ||||||| ||||||||||||||||||||||| |  |||||  |||||||||||||||||||||||  |||||||||||||||||||||    
T  5334276 tagtttagggacgattttgttcgatttaaaagaggtaggactattttcgtgagttggtcaaaatgtgaggaccaaaagtgtaattaag 5334363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 26026775 - 26026861
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 87  Q
    ||||||||||| | |||||||||||||| |||| |||||| ||||||||||| || |||||||| ||||||||||||||||||||||    
T  26026775 tagtttaaggatggttttgttcgatttataaaagataggaccattttcgtgaatttgtcaaaatagtaggaccaaaagtgtaattaa 26026861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 26048046 - 26047960
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 87  Q
    |||||||||||| ||||| |||||||||||||| ||| || |||||||||||||||||| ||||||||| | |||||||||||||||    
T  26048046 tagtttaaggacaattttattcgatttaaaaaagatatgaccattttcgtgagttggtcgaaatggtagaatcaaaagtgtaattaa 26047960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 9 - 94
Target Start/End: Complemental strand, 27245284 - 27245199
Alignment:
Q  9 ggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagctaaaa 94  Q
    ||||||||||||||||||||||| |  ||||| || |||||||||||||||||||||  |||||||||||||||||||||| ||||    
T  27245284 ggacgattttgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagccaaaa 27245199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 5333969 - 5333881
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||| ||||||||||||||||||||||| |  || || ||||||||||||||||||||||||  |||| |||||||||||||||||    
T  5333969 tagtttagggacgattttgttcgatttaaaagaggtacgaccattttcgtgagttggtcaaaatgcaaggatcaaaagtgtaattaagc 5333881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 7732577 - 7732489
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||||||||||||||||||||||||||| |  ||||| || |||||||||||| ||||||||  |||||||||| |||||||||||    
T  7732577 tagtttaaggacgattttgttcgatttaaaagaggtaggaccaatttcgtgagttgatcaaaatgcaaggaccaaaaatgtaattaagc 7732489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 16081756 - 16081844
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||| ||| ||||||||||||||||||| |  |||||||| |||||||||||||||||||||  ||||||||| ||||||||||||    
T  16081756 tagtttagggatgattttgttcgatttaaaagaggtaggatcaatttcgtgagttggtcaaaatgcaaggaccaaaggtgtaattaagc 16081844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 787243 - 787329
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 87  Q
    ||||||| ||||||||||||||||||||||| |  ||||| |||||||||||||||||||||||   || |||||||||||||||||    
T  787243 tagtttagggacgattttgttcgatttaaaagaggtaggaccattttcgtgagttggtcaaaatacgagcaccaaaagtgtaattaa 787329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 4 - 83
Target Start/End: Complemental strand, 35160741 - 35160660
Alignment:
Q  4 tttaaggacgattttgttcgatttaaaaaata--taggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaa 83  Q
    |||||| ||||||| ||||||||||||||| |  || || ||||||||||||||||||||||||||||||||||||||||||    
T  35160741 tttaagaacgatttagttcgatttaaaaaaaaaatatgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaa 35160660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 2758155 - 2758243
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||| ||||||||||||||||||||||| |  ||| | |||||||||||||||  |||||||  ||||||||||||||||||||||    
T  2758155 tagtttatggacgattttgttcgatttaaaagaggtagaaccattttcgtgagttgaacaaaatgcgaggaccaaaagtgtaattaagc 2758243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 9181869 - 9181957
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||| ||||||||||||||||||||||| |  || ||||| |||||||| ||||||||||||  |||| |||||||||||||||||    
T  9181869 tagtttagggacgattttgttcgatttaaaagaggtatgatcaatttcgtgaattggtcaaaatgcaaggatcaaaagtgtaattaagc 9181957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 25637286 - 25637198
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||| ||||||||||||||||||||||| |  ||||| || |||| |||||||||||| |||  ||||||||||||||||||||||    
T  25637286 tagtttagggacgattttgttcgatttaaaagaggtaggaccaatttcatgagttggtcaatatgcaaggaccaaaagtgtaattaagc 25637198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 39388725 - 39388813
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    |||||||  |||||||||||||||||||||| |  |||||  | |||||||||||||||||||||  ||||||||||||||||||||||    
T  39388725 tagtttagagacgattttgttcgatttaaaagaggtaggacaaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagc 39388813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 35161259 - 35161342
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaat 84  Q
    ||||||| ||||||||||||||||||||||| |  ||||| || || ||||||||||||||||||  |||||||||||||||||    
T  35161259 tagtttagggacgattttgttcgatttaaaagaggtaggaccaattccgtgagttggtcaaaatgcaaggaccaaaagtgtaat 35161342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 24929765 - 24929859
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagctaaaat 95  Q
    ||||||| ||||||||||||| ||||||||| |  || || || |||||||||||||||||||||  |||||||||| ||||||||||| |||||    
T  24929765 tagtttagggacgattttgtttgatttaaaagaggtaagaccaatttcgtgagttggtcaaaatgcaaggaccaaaaatgtaattaagccaaaat 24929859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 28687956 - 28688041
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 87  Q
    ||||||| ||||||||||||||||||||||| |  || ||||| |||||||||||||||||||||  |||||||||| |||||||||    
T  28687956 tagtttagggacgattttgttcgatttaaaagaggtatgatcaatttcgtgagttggtcaaaatgcaaggaccaaaa-tgtaattaa 28688041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 4 - 89
Target Start/End: Complemental strand, 48247673 - 48247588
Alignment:
Q  4 tttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    |||| ||||||||||||| ||||||||| |  ||||| || |||||||||||| ||||||||  ||||||||||||||||||||||    
T  48247673 tttagggacgattttgtttgatttaaaagaggtaggaccaatttcgtgagttgatcaaaatgcaaggaccaaaagtgtaattaagc 48247588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 26048403 - 26048491
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    |||||||||||| |||||||| ||||||||| |  ||||| || ||||||||||||||||||| |  |||| |||||||||||||||||    
T  26048403 tagtttaaggacaattttgtttgatttaaaagaggtaggaccaatttcgtgagttggtcaaaacgcaaggaacaaaagtgtaattaagc 26048491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 26026406 - 26026320
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 87  Q
    ||||||| ||||||||||||||||||||||| |  || || || ||||||||| ||||||||||   ||||||||||||||||||||    
T  26026406 tagtttatggacgattttgttcgatttaaaagaggtatgaccaatttcgtgagctggtcaaaatacaaggaccaaaagtgtaattaa 26026320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 25 - 87
Target Start/End: Original strand, 40669689 - 40669751
Alignment:
Q  25 tttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 87  Q
    |||||||||  || |||||||||||||||||||||||||||| |||| |||||||||||||||    
T  40669689 tttaaaaaaagtatgatcattttcgtgagttggtcaaaatggaaggatcaaaagtgtaattaa 40669751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 9394187 - 9394275
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagct 90  Q
    ||||||| ||||| ||||||||||||| |||||  ||||| |||||| ||||| |||||||||||  | |||||||||||||||||||||    
T  9394187 tagtttagggacggttttgttcgatttgaaaaaggtaggaccatttttgtgagctggtcaaaatgcga-gaccaaaagtgtaattaagct 9394275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 5746098 - 5746185
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||| ||||| ||||||||||||||||| |   || |||| ||||||||||| |||||||||  ||||||||||||||||||||||    
T  5746098 tagtttatggacggttttgttcgatttaaaagaggcag-atcaatttcgtgagttagtcaaaatgcaaggaccaaaagtgtaattaagc 5746185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 39136775 - 39136687
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||| ||||||||||||||||||| ||| |   || | |||||||||||| |||||||||||  |||| |||||||||||||||||    
T  39136775 tagtttagggacgattttgttcgatttgaaagagtcagaaccattttcgtgagctggtcaaaatgcaaggatcaaaagtgtaattaagc 39136687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 39136991 - 39137078
Alignment:
Q  2 agtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    |||||| ||||||||||||||||||||||| |   |||| ||||||||||||  |||||||||   |||| |||||||||||||||||    
T  39136991 agtttatggacgattttgttcgatttaaaagaggcaggaccattttcgtgagcgggtcaaaatacgaggatcaaaagtgtaattaagc 39137078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 34594672 - 34594585
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 88  Q
    ||||||| ||| ||||||||| |||| |||| ||    ||| ||||||||||||| |||||||||  |||||||||||||||||||||    
T  34594672 tagtttagggatgattttgtttgattgaaaagatgcgagataattttcgtgagttagtcaaaatgcgaggaccaaaagtgtaattaag 34594585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 4477791 - 4477703
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||| |||||||||| ||| |||||||| |    ||| ||||||||||| ||||||||||||  |||| ||| |||||||||||||    
T  4477791 tagtttagggacgattttattcaatttaaaagaggcgggaccattttcgtgaattggtcaaaatgtaaggatcaatagtgtaattaagc 4477703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 87
Target Start/End: Original strand, 11973862 - 11973945
Alignment:
Q  4 tttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 87  Q
    |||| |||||||||||||| |||||||| |  ||| | || ||||||  |||||||||||||  |||||||||| |||||||||    
T  11973862 tttagggacgattttgttcaatttaaaagaggtagaaccaatttcgtacgttggtcaaaatgcaaggaccaaaaatgtaattaa 11973945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 42 - 89
Target Start/End: Complemental strand, 49064082 - 49064035
Alignment:
Q  42 cattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    |||||||||||| ||||||||||   ||||||||||||||||||||||    
T  49064082 cattttcgtgagctggtcaaaatacgaggaccaaaagtgtaattaagc 49064035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 428 - 462
Target Start/End: Original strand, 22484043 - 22484077
Alignment:
Q  428 agaaaattgcataattcactataattatatgtgtc 462  Q
    |||||||||||||||||| ||||||||||||||||    
T  22484043 agaaaattgcataattcagtataattatatgtgtc 22484077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 35579381 - 35579430
Alignment:
Q  40 atcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    |||||||||||||| || ||||||||  |||| |||||||||||||||||    
T  35579381 atcattttcgtgagctgatcaaaatgcgaggatcaaaagtgtaattaagc 35579430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 82; Significance: 2e-38; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 34789471 - 34789374
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagctaaaatatt 98  Q
    ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  34789471 tagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagccaaattatt 34789374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 21034324 - 21034236
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  21034324 tagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 21034236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 28465538 - 28465626
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  28465538 tagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 28465626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 56077781 - 56077869
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||||||||||||||||||||||||||||| ||| || |||||||||||||||||||||||||||||||||||| |||||||||||    
T  56077781 tagtttaaggacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggaccaaaaatgtaattaagc 56077869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 54441026 - 54441113
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 88  Q
    ||||||||||||||||||||||||||||||||| |||||| |||||||||||| || |||||||||||||||||||||||||||||||    
T  54441026 tagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagctgatcaaaatggtaggaccaaaagtgtaattaag 54441113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 33777721 - 33777635
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 87  Q
    ||||||||||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  33777721 tagtttaaggacgattttgttcgattttaaaaaaatatgatcattttcgtgagttggtcaaaatggtaggaacaaaagtgtaattaa 33777635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 12593113 - 12593025
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    |||||||||||||||||||||||||||||||||  || || ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  12593113 tagtttaaggacgattttgttcgatttaaaaaaggtatgaccattttcgtgagttggtcaaactggtaggaccaaaagtgtaattaagc 12593025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 14440285 - 14440373
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||||||| ||||||||||||||||||||| |||||| ||||||||| |||||||||||||||||||||||||||| |||||||||    
T  14440285 tagtttaaggatgattttgttcgatttaaaaaagataggaccattttcgtaagttggtcaaaatggtaggaccaaaagtataattaagc 14440373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 24851405 - 24851317
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    |||||||||||||||||||||| |||||||||| |||| | |||||||||||||||||||||||||||||| |||||||||||||||||    
T  24851405 tagtttaaggacgattttgttcaatttaaaaaagatagcaccattttcgtgagttggtcaaaatggtaggatcaaaagtgtaattaagc 24851317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 26974372 - 26974284
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||||||||||||||||||||||||||||| ||| || |||||||||||||| || ||||||||||||||||||||||||||||||    
T  26974372 tagtttaaggacgattttgttcgatttaaaaaagatatgaccattttcgtgagtttgttaaaatggtaggaccaaaagtgtaattaagc 26974284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 41114246 - 41114160
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 87  Q
    ||||||||||||| ||||||||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||||| |||||    
T  41114246 tagtttaaggacgtttttgttcgatttaaaaaagataggacccttttcgtgagttggtcaaaatggtaggaccaaaagtgtcattaa 41114160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 45839007 - 45839092
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 87  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||| ||||||||||||||||| ||||||||||||||||||||||    
T  45839007 tagtttaaggacgattttgttcgatttaaaaaagataggaccattt-cgtgagttggtcaaaatagtaggaccaaaagtgtaattaa 45839092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 14 - 89
Target Start/End: Original strand, 36168801 - 36168876
Alignment:
Q  14 attttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  36168801 attttgttctatttaaaaaaaataggatcattttcgtgagttggtcaaaatggtaggaccaagagtgtaattaagc 36168876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 1397683 - 1397597
Alignment:
Q  2 agtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 88  Q
    |||||||||||||||||||||||||||||||| |||||| ||||||  |||||||||||||||||| ||| ||||||||||||||||    
T  1397683 agtttaaggacgattttgttcgatttaaaaaagataggaccatttttatgagttggtcaaaatggttggatcaaaagtgtaattaag 1397597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 6616761 - 6616675
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 87  Q
    ||||||||||||||||||||||||||||||||| ||| || ||||||||||||||| |||||||| ||| |||||||||||||||||    
T  6616761 tagtttaaggacgattttgttcgatttaaaaaaaataagaccattttcgtgagttgatcaaaatgatagaaccaaaagtgtaattaa 6616675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 28166093 - 28166007
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 87  Q
    |||||||||||| |||||||||||||||||||| |||||| ||||||||||||||||||||||| |||||||||||| | |||||||    
T  28166093 tagtttaaggacaattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatagtaggaccaaaaatttaattaa 28166007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 41608872 - 41608960
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||||| ||||||||||| ||||||||| |  ||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  41608872 tagtttaagaacgattttgttggatttaaaagaggtaggaccaatttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 41608960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 46736744 - 46736656
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    |||||||||||| |||||||||||||||||||| ||| || ||||||||||||||||||||||| |||| ||||||||| |||||||||    
T  46736744 tagtttaaggacaattttgttcgatttaaaaaaaataagaccattttcgtgagttggtcaaaatagtagaaccaaaagtataattaagc 46736656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 28465170 - 28465083
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 88  Q
    ||||||||||||||||||||||||||||||| |  |||||||| |||||| ||||||||||||||| ||||| |||||||||||||||    
T  28465170 tagtttaaggacgattttgttcgatttaaaagaggtaggatcaatttcgtaagttggtcaaaatggaaggactaaaagtgtaattaag 28465083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 33689918 - 33689830
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||||||||||||||||||||||||||| |  ||||| || ||| |||||||||||||||||  ||||||||||||||||||||||    
T  33689918 tagtttaaggacgattttgttcgatttaaaagaggtaggaccaattttgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagc 33689830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 46737112 - 46737200
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||| ||||||||||||||||||||||| |  ||||| || |||||||||||||||||||||  ||||||||||||||||||||||    
T  46737112 tagtttagggacgattttgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagc 46737200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 24851923 - 24852010
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 88  Q
    ||||||| ||||||||||||||||||||||| |  |||||||| |||||||||||||||||||||  |||||||||||| ||||||||    
T  24851923 tagtttagggacgattttgttcgatttaaaagaggtaggatcaatttcgtgagttggtcaaaatgcaaggaccaaaagtataattaag 24852010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 54440660 - 54440573
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 88  Q
    ||||||| ||||||||||||||||||||||| |  ||||| || |||||||||||||||||||||  |||||||||||||||||||||    
T  54440660 tagtttagggacgattttgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaag 54440573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 16214952 - 16215038
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 87  Q
    |||||||||||||||||| ||| |||||||||| ||| |||||||||||| ||||| |||||||| ||||||||||||| |||||||    
T  16214952 tagtttaaggacgattttattcaatttaaaaaagatatgatcattttcgtaagttgatcaaaatgataggaccaaaagtataattaa 16215038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 35643644 - 35643558
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 87  Q
    |||||||||||||||||| ||| |||| ||||| |||||| ||||||||||||||||||||||||||| |||||| ||||| |||||    
T  35643644 tagtttaaggacgattttattcaattttaaaaagataggaccattttcgtgagttggtcaaaatggtaagaccaatagtgtgattaa 35643558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 19529151 - 19529239
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    |||||||| ||||||||||||| |||||||| | |||| ||||||||  | |||||||||||||||||||| |||||||||||||||||    
T  19529151 tagtttaaagacgattttgttcaatttaaaagagatagaatcatttttataagttggtcaaaatggtaggagcaaaagtgtaattaagc 19529239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 21034702 - 21034782
Alignment:
Q  9 ggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||||||||||||||||||| | |||||| || |||||||||||||||||||||  |||||||||| |||||||||||    
T  21034702 ggacgattttgttcgatttaaaagagataggaccaatttcgtgagttggtcaaaatgcaaggaccaaaattgtaattaagc 21034782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 34789840 - 34789927
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 88  Q
    ||||||| |||| |||||||||||||||||| |  ||||| || |||||||||||||||||||||  |||||||||||||||||||||    
T  34789840 tagtttagggacaattttgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaag 34789927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 12593480 - 12593568
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    |||||||  |||||||||||||||||||||| |  || || || |||||||||||||||||||||  ||||||||||||||||||||||    
T  12593480 tagtttacagacgattttgttcgatttaaaagaggtatgaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagc 12593568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 19528958 - 19528870
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||| |||||||||| |||||||||||| |  ||||| || |||||||| ||||||||||||  ||||||||||||||||||||||    
T  19528958 tagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgaattggtcaaaatgcaaggaccaaaagtgtaattaagc 19528870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 55677415 - 55677503
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    |||||||  |||||||||||||||||||||| |  ||||| || ||||||||||||||||||||   ||||||||||||||||||||||    
T  55677415 tagtttagagacgattttgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaatacaaggaccaaaagtgtaattaagc 55677503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 34807596 - 34807682
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 87  Q
    |||||||||||||||||||||||| |||||||| |||| || |||||||||||||| |||||||  || |||||||| | |||||||    
T  34807596 tagtttaaggacgattttgttcgaattaaaaaagatagaataattttcgtgagttgatcaaaataataagaccaaaaatataattaa 34807682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 11 - 88
Target Start/End: Original strand, 33778079 - 33778156
Alignment:
Q  11 acgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 88  Q
    ||||||||||| ||||||||| |  ||| |||||||||||||||| ||||||||||||| || |||||||||||||||    
T  33778079 acgattttgtttgatttaaaagaggtagaatcattttcgtgagttagtcaaaatggtagaacgaaaagtgtaattaag 33778156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 4 - 89
Target Start/End: Complemental strand, 34807202 - 34807117
Alignment:
Q  4 tttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    |||| ||||||||||||||||||||||| |  || || || |||||||||||| ||||||||  ||||||||||||||||||||||    
T  34807202 tttagggacgattttgttcgatttaaaagaggtatgaccaatttcgtgagttgatcaaaatgcaaggaccaaaagtgtaattaagc 34807117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 45838636 - 45838548
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||| ||||||||||||||||||||||| |  ||||| || || |||||||||||||||||   |||||||||||||||| |||||    
T  45838636 tagtttagggacgattttgttcgatttaaaagaggtaggaccaattacgtgagttggtcaaaatacaaggaccaaaagtgtaaataagc 45838548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 4 - 87
Target Start/End: Complemental strand, 36168415 - 36168332
Alignment:
Q  4 tttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 87  Q
    |||||||||||||||||||||||||||| |  || || || ||||||| |||||||||||||  |||| |||||||||||||||    
T  36168415 tttaaggacgattttgttcgatttaaaagaggtaagaccaatttcgtgggttggtcaaaatgcaaggagcaaaagtgtaattaa 36168332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 14439917 - 14439831
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 87  Q
    ||||||| |||||||||||||  ||||||||||  || || || |||||||||||||||||||||  |||||||||| |||||||||    
T  14439917 tagtttagggacgattttgtttaatttaaaaaaggtatgaccaatttcgtgagttggtcaaaatgcaaggaccaaaaatgtaattaa 14439831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 17504416 - 17504480
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatg 65  Q
    ||||||||||||| ||||||||||||||||| | |||||| |||||||||||| || ||||||||    
T  17504416 tagtttaaggacggttttgttcgatttaaaagagataggaccattttcgtgagctgttcaaaatg 17504480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 229616 - 229702
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 87  Q
    ||||||||||||||||||||| ||||| ||| |   | || |||||||||||| |||||||||||  | ||||||||||||||||||    
T  229616 tagtttaaggacgattttgtttgatttgaaagaggcaagaccattttcgtgagctggtcaaaatgcgaagaccaaaagtgtaattaa 229702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 9 - 87
Target Start/End: Complemental strand, 41608455 - 41608377
Alignment:
Q  9 ggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 87  Q
    ||||||||||||||||||||||| |  || || || |||| ||||||| ||||||||  ||||||||||||||||||||    
T  41608455 ggacgattttgttcgatttaaaagaggtatgaccaatttcatgagttgatcaaaatgcaaggaccaaaagtgtaattaa 41608377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 23986609 - 23986521
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||| ||||  ||||||||||||| ||| | | | || |||||||||||| |||||||||||  ||||||||||||| ||||||||    
T  23986609 tagtttagggacagttttgttcgatttgaaagagacatgaccattttcgtgagctggtcaaaatgtgaggaccaaaagtgaaattaagc 23986521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 35193397 - 35193322
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaa 76  Q
    ||||||| ||||||||||||||||||| ||| |  ||||| |||||||||||| || ||||||||  |||||||||    
T  35193397 tagtttagggacgattttgttcgatttgaaagaggtaggaccattttcgtgagctgatcaaaatgcgaggaccaaa 35193322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 45 - 88
Target Start/End: Original strand, 35644063 - 35644106
Alignment:
Q  45 tttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 88  Q
    |||||||||||||||||||||  |||||||||||||||||||||    
T  35644063 tttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaag 35644106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 17 - 88
Target Start/End: Complemental strand, 44219448 - 44219377
Alignment:
Q  17 ttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 88  Q
    |||||| |||||||||| | |||| || |||||||||||||| |||||   |||||||||||||||||||||    
T  44219448 ttgttcaatttaaaaaagagaggaccaatttcgtgagttggttaaaatacgaggaccaaaagtgtaattaag 44219377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 229250 - 229164
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 87  Q
    |||||||||||||||||||||| |||| ||| |   | || |||||||| ||| ||||||||||   ||||||||||||||||||||    
T  229250 tagtttaaggacgattttgttcaatttgaaagaggcaagaccattttcgcgagctggtcaaaatacgaggaccaaaagtgtaattaa 229164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 6617119 - 6617205
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 87  Q
    ||||||| |||||||||| |||||||||||| |  ||||| || ||||||||||| |||||||||  || | ||||| |||||||||    
T  6617119 tagtttagggacgattttattcgatttaaaagaggtaggaccaatttcgtgagttagtcaaaatgcaagtagcaaaaatgtaattaa 6617205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 26974702 - 26974788
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 87  Q
    ||||||| |||| |||||||||||||||||| |  ||||| || |||||||| ||  ||||||||  |||||||||| |||||||||    
T  26974702 tagtttagggacaattttgttcgatttaaaagaggtaggaccaatttcgtgaattattcaaaatgcaaggaccaaaaatgtaattaa 26974788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 4 - 98
Target Start/End: Original strand, 30597979 - 30598073
Alignment:
Q  4 tttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagctaaaatatt 98  Q
    |||| ||||||||||||||||||||||| | | || | || || ||||||||||||||||    ||||||||||||||||| |||| ||| ||||    
T  30597979 tttagggacgattttgttcgatttaaaagagacagaaccaattccgtgagttggtcaaaacacgaggaccaaaagtgtaatcaagccaaattatt 30598073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 43 - 87
Target Start/End: Original strand, 40160589 - 40160633
Alignment:
Q  43 attttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 87  Q
    |||||||||||||||||||||||  |||||||||| |||||||||    
T  40160589 attttcgtgagttggtcaaaatgcaaggaccaaaaatgtaattaa 40160633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 88
Target Start/End: Original strand, 51641302 - 51641374
Alignment:
Q  16 tttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 88  Q
    |||||| |||||||||||   ||||||| ||||||||||| ||| |||||  ||||| |||||||||||||||    
T  51641302 tttgtttgatttaaaaaaggcaggatcaatttcgtgagtttgtctaaatgcaaggactaaaagtgtaattaag 51641374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 10 - 87
Target Start/End: Original strand, 10795777 - 10795854
Alignment:
Q  10 gacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 87  Q
    |||||||||||||||||| ||| | | |||| || ||||||||| || ||||||||   ||| |||||||||||||||    
T  10795777 gacgattttgttcgatttgaaagagagaggaccaatttcgtgagctgttcaaaatgcggggatcaaaagtgtaattaa 10795854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 24336234 - 24336307
Alignment:
Q  15 ttttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 88  Q
    ||||||||||||| ||| |   |||| |||||||||||| | |||||||||  |||| ||||||||||||||||    
T  24336234 ttttgttcgatttgaaagaggcaggaccattttcgtgagcttgtcaaaatgcgaggatcaaaagtgtaattaag 24336307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 35193766 - 35193847
Alignment:
Q  8 aggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    |||||| ||||||| ||||| ||| |   |||| |||||||||||| |  ||||||||  ||||||||||||||||||||||    
T  35193766 aggacggttttgttagatttgaaagaggcaggaccattttcgtgagcttatcaaaatgcaaggaccaaaagtgtaattaagc 35193847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 17504027 - 17503975
Alignment:
Q  37 aggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    |||| |||||||||||| |||||||||||  |||||||| ||| |||||||||    
T  17504027 aggaccattttcgtgagatggtcaaaatgcgaggaccaacagtataattaagc 17503975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 51309962 - 51310050
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||| ||||  ||||||||||||| ||| |   | || |||||||||||| |||| ||||||  ||||||||||||| ||||||||    
T  51309962 tagtttagggactgttttgttcgatttgaaagaggcatgaccattttcgtgagctggtaaaaatgcgaggaccaaaagtgcaattaagc 51310050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 81; Significance: 7e-38; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 11539726 - 11539638
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  11539726 tagtttaaggacgattttgttcgatttaaaaaaaataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 11539638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 38008408 - 38008496
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  38008408 tagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 38008496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 20127825 - 20127737
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  20127825 tagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgaattggtcaaaatggtaggaccaaaagtgtaattaagc 20127737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 33921069 - 33921157
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    |||||||| |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  33921069 tagtttaaagacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 33921157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 5560140 - 5560052
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    |||||||||||||||||||||| |||||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  5560140 tagtttaaggacgattttgttcaatttaaaaaagatatgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 5560052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 8 - 88
Target Start/End: Original strand, 649801 - 649881
Alignment:
Q  8 aggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 88  Q
    |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  649801 aggacgattttgttcgatttaaaaaaaataggaccattttcgtgagttggtcaaaatgataggaccaaaagtgtaattaag 649881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 4356213 - 4356301
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||||||||||||||||||||||||||||| ||| || |||| ||||||||||||||||||| |||||||||||||||||||||||    
T  4356213 tagtttaaggacgattttgttcgatttaaaaaagatatgaccattatcgtgagttggtcaaaatgataggaccaaaagtgtaattaagc 4356301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 4809336 - 4809424
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    |||||||||||||| ||||||| |||||||||| |||||| |||||||||||||| |||||||||||||||||||||||||||||||||    
T  4809336 tagtttaaggacgactttgttcaatttaaaaaacataggaccattttcgtgagttagtcaaaatggtaggaccaaaagtgtaattaagc 4809424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 16953024 - 16952936
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||||||||||||||||||||||||||||| ||| ||  ||||||||||||||||||||||||||||||||||||| |||||||||    
T  16953024 tagtttaaggacgattttgttcgatttaaaaaagataagacaattttcgtgagttggtcaaaatggtaggaccaaaagtataattaagc 16952936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 17060995 - 17060907
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||||||||||||||||||||||||||||| ||| ||  ||||||||||||||||||||||||||||||||||||| |||||||||    
T  17060995 tagtttaaggacgattttgttcgatttaaaaaagataagacaattttcgtgagttggtcaaaatggtaggaccaaaagtataattaagc 17060907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 43160468 - 43160556
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||||||||||||| ||||||||||||||| |||||| |||||||||||||| ||||||||||||||||| |||||||||||||||    
T  43160468 tagtttaaggacgatttagttcgatttaaaaaagataggaccattttcgtgagtttgtcaaaatggtaggacctaaagtgtaattaagc 43160556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 13315582 - 13315496
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 87  Q
    ||||||||||||||||||||||||||||||||| ||| || ||||||| ||||||||||||||||||||||| ||||||||||||||    
T  13315582 tagtttaaggacgattttgttcgatttaaaaaagatatgaccattttcatgagttggtcaaaatggtaggacaaaaagtgtaattaa 13315496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 15551136 - 15551218
Alignment:
Q  5 ttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 87  Q
    ||||||||||||||||||||||||||||||||| || |||||| |||||||||||||||||||||| ||||||||||||||||    
T  15551136 ttaaggacgattttgttcgatttaaaaaatatatgaccatttttgtgagttggtcaaaatggtagggccaaaagtgtaattaa 15551218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 63046 - 62958
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||||||||||||||||||||||| |||||  ||||| ||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  63046 tagtttaaggacgattttgttcgattttaaaaaggtaggaccattttcgtgagttggtcaaaatggaaggaccataagtgtaattaagc 62958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 6949540 - 6949452
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||| ||||||||||||||||||||||||||| |||||| |||||||||||||| ||||||||| ||||||||||| |||||||||||    
T  6949540 tagttaaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttagtcaaaatgataggaccaaaaatgtaattaagc 6949452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 42192329 - 42192236
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagctaaaa 94  Q
    ||||||| ||||||||||||||||||||||| |  ||||| ||||||||||||||||||||||||  |||||||||||||||||||||| ||||    
T  42192329 tagtttagggacgattttgttcgatttaaaagaggtaggaccattttcgtgagttggtcaaaatgtgaggaccaaaagtgtaattaagccaaaa 42192236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 4 - 89
Target Start/End: Complemental strand, 44219730 - 44219645
Alignment:
Q  4 tttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||||| ||||||||||||||||||||  |||||||||||| |||||||| ||||||||| ||||||||||||||||||||||    
T  44219730 tttaaggacaattttgttcgatttaaaaaaggtaggatcatttttgtgagttgatcaaaatggaaggaccaaaagtgtaattaagc 44219645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 42192700 - 42192788
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||| ||||||||||||||||||||||| |  ||||| ||||||||||||||||||||||||  ||||||||||||||||||||||    
T  42192700 tagtttagggacgattttgttcgatttaaaagaggtaggaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaagc 42192788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 6949901 - 6949996
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagctaaaata 96  Q
    ||||||| |||||||||||||| |||||||| || ||||| || |||||||||||||||||||||  |||||||||||||||||||||| ||||||    
T  6949901 tagtttagggacgattttgttctatttaaaagatgtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagccaaaata 6949996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 32418603 - 32418691
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||||||||||||||||||||||||||| |  ||| |||| |||||||| |||||||||||| ||||||||||||| |||||||||    
T  32418603 tagtttaaggacgattttgttcgatttaaaagaggtagaatcaatttcgtgaattggtcaaaatgataggaccaaaagtataattaagc 32418691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 38008039 - 38007951
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||| ||||||||||||||||||||||| |  ||||| || |||||||||||||||||||||  ||||||||||||||||||||||    
T  38008039 tagtttagggacgattttgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagc 38007951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 4 - 89
Target Start/End: Original strand, 25336060 - 25336145
Alignment:
Q  4 tttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    |||| ||||||||||||||||||||||| |  ||||| || |||||||||||||||||||||  ||||||||||||||||||||||    
T  25336060 tttagggacgattttgttcgatttaaaagaagtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagc 25336145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 11540095 - 11540183
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||| ||||||||||||||||||||||| |  ||||| ||||||||||||||||||||||||  | |||||||||| |||||||||    
T  11540095 tagtttatggacgattttgttcgatttaaaagaggtaggaccattttcgtgagttggtcaaaatgcgatgaccaaaagtataattaagc 11540183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 13399877 - 13399964
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    |||||||||||| |||||||||||||||||| | |||| | ||||||||||||||||||||||||||||||| |||| || ||||||||    
T  13399877 tagtttaaggacaattttgttcgatttaaaagaaatag-accattttcgtgagttggtcaaaatggtaggactaaaattgcaattaagc 13399964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 20128194 - 20128282
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||||||||||||||||| ||||||||| |  ||||| || |||||||||||||| ||||||  ||||||||||||||||||||||    
T  20128194 tagtttaaggacgattttgtttgatttaaaagaggtaggaccaatttcgtgagttggtaaaaatgcaaggaccaaaagtgtaattaagc 20128282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 24140131 - 24140219
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||| ||||||||||||| |||||||||||  ||||| |||||||||||||||||||| |||  |||| |||||||||||||||||    
T  24140131 tagtttatggacgattttgtttgatttaaaaaaggtaggaccattttcgtgagttggtcaagatgcgaggaacaaaagtgtaattaagc 24140219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 44220102 - 44220190
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||| ||||||||||||| |||||||||||  || || ||||||||||||||||||||||||  ||||| ||||||||||||||||    
T  44220102 tagtttagggacgattttgtttgatttaaaaaaggtatgaccattttcgtgagttggtcaaaatgcgaggacaaaaagtgtaattaagc 44220190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 33920701 - 33920615
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 87  Q
    ||||||| ||||||||||||||||||||||| |  || ||||| |||||||||||||||||||||  |||||||||| |||||||||    
T  33920701 tagtttagggacgattttgttcgatttaaaagaggtatgatcaatttcgtgagttggtcaaaatgcaaggaccaaaaatgtaattaa 33920615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 4355844 - 4355747
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagctaaaatatt 98  Q
    ||||||| ||||||||||||||||||||||| |  || || || |||||||||| ||||||||||  |||||||||||||||||||||| || |||||    
T  4355844 tagtttagggacgattttgttcgatttaaaagaggtatgaccaatttcgtgagtaggtcaaaatgcaaggaccaaaagtgtaattaagccaatatatt 4355747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 16175807 - 16175892
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaatta 86  Q
    ||||||||||||||||||||||||||||||| |  || || || |||||||||||||| ||||||  |||||||||||||||||||    
T  16175807 tagtttaaggacgattttgttcgatttaaaagaggtatgaccaatttcgtgagttggtaaaaatgtaaggaccaaaagtgtaatta 16175892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 649616 - 649528
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||| ||||||||||||||||||||||| |  ||||| || |||||| |||||||||| |||  ||||||||||||||||||||||    
T  649616 tagtttagggacgattttgttcgatttaaaagaggtaggaccaatttcgtaagttggtcaagatgcaaggaccaaaagtgtaattaagc 649528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 43216166 - 43216254
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||| ||||||||||||||||||||||| |  ||||| || ||||||||||||||||||| |  ||||| ||||||||||||||||    
T  43216166 tagtttagggacgattttgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaacgcaaggactaaaagtgtaattaagc 43216254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 4808968 - 4808882
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 87  Q
    ||||||| ||||||||||||||||||||||| |  |||||||| |||||||||||||||||||||  || || |||| |||||||||    
T  4808968 tagtttatggacgattttgttcgatttaaaagaggtaggatcaatttcgtgagttggtcaaaatgcaagaactaaaaatgtaattaa 4808882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 15550762 - 15550676
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 87  Q
    ||||||| ||||||||||||||||||||||| |  ||||| || |||||||||||||||| ||||  |||| |||||||||||||||    
T  15550762 tagtttagggacgattttgttcgatttaaaagaggtaggaccaatttcgtgagttggtcagaatgcaaggatcaaaagtgtaattaa 15550676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 28143486 - 28143574
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||| ||||||||||||||||||| ||| |   |||| |||||||||||| |||||||||||  ||||||||||||| ||||||||    
T  28143486 tagtttagggacgattttgttcgatttgaaagaggcaggaccattttcgtgagctggtcaaaatgcgaggaccaaaagtgaaattaagc 28143574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 28 - 87
Target Start/End: Complemental strand, 9329974 - 9329915
Alignment:
Q  28 aaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 87  Q
    |||||| |||||| |||||| |||||||||||||||| ||||||||||||||||||||||    
T  9329974 aaaaaagataggaccatttttgtgagttggtcaaaattgtaggaccaaaagtgtaattaa 9329915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 63421 - 63507
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 87  Q
    ||||||| ||||||||||||| ||||||||| | ||| || |||||||||||||||||||||||   |||||||||| | |||||||    
T  63421 tagtttagggacgattttgtttgatttaaaagagataagaccattttcgtgagttggtcaaaatacaaggaccaaaaatataattaa 63507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 9330260 - 9330338
Alignment:
Q  9 ggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 87  Q
    ||||||||||||||||||||||| |  || ||  | |||||||||||||||||||||  ||||||||||||||||||||    
T  9330260 ggacgattttgttcgatttaaaagaggtatgacaaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaa 9330338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 16953405 - 16953479
Alignment:
Q  15 ttttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||||||||||||| |  ||||| || |||| ||||||||||||||||  ||||||||||||||||||||||    
T  16953405 ttttgttcgatttaaaagaggtaggaccaatttcatgagttggtcaaaatgcaaggaccaaaagtgtaattaagc 16953479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 20495282 - 20495196
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 87  Q
    ||||||| ||||||||||||| ||||||||| |   | |||||||||||||||||||||||||||  || |||||||||| ||||||    
T  20495282 tagtttagggacgattttgttagatttaaaagaggcatgatcattttcgtgagttggtcaaaatgcgagaaccaaaagtgaaattaa 20495196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 43160098 - 43160012
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 87  Q
    ||||||| ||||||||||||||||||||||| |  || || || |||||||||||| ||||||||  |||||||||| |||||||||    
T  43160098 tagtttagggacgattttgttcgatttaaaagaggtatgaccaatttcgtgagttgatcaaaatgcaaggaccaaaaatgtaattaa 43160012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 32418246 - 32418160
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||| ||||||||||||||||||  ||| |  ||||| || |||||||||||||||||||||  ||||||| ||||||||||||||    
T  32418246 tagtttagggacgattttgttcgatt--aaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccataagtgtaattaagc 32418160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 31797234 - 31797322
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||| ||||| ||||||||||||| ||| |   | || |||||||||||| |||||||||||  ||||||||||||||||||||||    
T  31797234 tagtttagggacggttttgttcgatttgaaagaggcatgaccattttcgtgagctggtcaaaatgtgaggaccaaaagtgtaattaagc 31797322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 4 - 89
Target Start/End: Original strand, 14942306 - 14942391
Alignment:
Q  4 tttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    |||| |||| |||||||||||||| ||| | | | || |||||||||||| |||||||||||  | ||||||||||||||||||||    
T  14942306 tttatggacaattttgttcgatttgaaagagacaagaccattttcgtgagctggtcaaaatgcgaagaccaaaagtgtaattaagc 14942391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 4 - 80
Target Start/End: Original strand, 2190536 - 2190612
Alignment:
Q  4 tttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtg 80  Q
    |||| ||||||||||||||||||| |||||   |||| || ||||||||| |||||||||||  | |||||||||||    
T  2190536 tttagggacgattttgttcgatttgaaaaaggcaggaccaatttcgtgagctggtcaaaatgcgatgaccaaaagtg 2190612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 87
Target Start/End: Complemental strand, 3822995 - 3822924
Alignment:
Q  16 tttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 87  Q
    |||||||| ||||||||    ||||||| |||| ||||||||| ||||||  ||||||||||||||||||||    
T  3822995 tttgttcggtttaaaaagggcaggatcaatttcatgagttggttaaaatgcgaggaccaaaagtgtaattaa 3822924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 42 - 87
Target Start/End: Complemental strand, 9329879 - 9329833
Alignment:
Q  42 cattttcgtgagttgg-tcaaaatggtaggaccaaaagtgtaattaa 87  Q
    |||||||||||||| | |||||||| |||||||||||||||||||||    
T  9329879 cattttcgtgagttagatcaaaatgataggaccaaaagtgtaattaa 9329833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 5035952 - 5035903
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgt 50  Q
    ||||||| ||||| ||||||||||||||||||| | |||| |||||||||    
T  5035952 tagtttagggacggttttgttcgatttaaaaaagacaggaccattttcgt 5035903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 87
Target Start/End: Original strand, 5561018 - 5561083
Alignment:
Q  22 cgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 87  Q
    |||||||||| |  |||||||| ||||||||||| || ||||||  ||||||||||| ||||||||    
T  5561018 cgatttaaaagaggtaggatcaatttcgtgagttagttaaaatgcaaggaccaaaagggtaattaa 5561083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 56 - 89
Target Start/End: Complemental strand, 17023634 - 17023601
Alignment:
Q  56 ggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    |||||||||||||||||||||||| |||||||||    
T  17023634 ggtcaaaatggtaggaccaaaagtataattaagc 17023601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 79; Significance: 1e-36; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 18428219 - 18428305
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 87  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  18428219 tagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 18428305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 15256288 - 15256376
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  15256288 tagtttaaggacgattttgttcgatttaaaaaagataggaccattttcatgagttggtcaaaatggtaggaccaaaagtgtaattaagc 15256376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 41260360 - 41260272
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  41260360 tagtttaaggacgattttgttcgatttaaaaaagataggaccattttcatgagttggtcaaaatggtaggaccaaaagtgtaattaagc 41260272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 5730906 - 5730818
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||||||||||||||||| ||||||||||| ||||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  5730906 tagtttaaggacgattttgtttgatttaaaaaagataggactattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 5730818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 18049679 - 18049595
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaatt 85  Q
    ||||||||||||||||||||||||||||||||| |||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  18049679 tagtttaaggacgattttgttcgatttaaaaaagatagaaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaatt 18049595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 2208803 - 2208716
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 88  Q
    ||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||||||||||||||||| ||||||||||||||||    
T  2208803 tagtttaaggacgattttgttcgatttaaaaaagataggacaattttcgtgagttggtcaaaatggtaggatcaaaagtgtaattaag 2208716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 34799168 - 34799071
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag-ctaaaatat 97  Q
    |||||||||||||| |||||||||||||||||| |||||| ||||||| ||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  34799168 tagtttaaggacgactttgttcgatttaaaaaaaataggaccattttcatgagttggtcaaaatggtatgaccaaaagtgtaattaagcctaaaatat 34799071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 599955 - 600043
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    |||||||||||||||||||||| |||||||||| ||| || ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  599955 tagtttaaggacgattttgttccatttaaaaaagatatgaccattttcgttagttggtcaaaatggtaggaccaaaagtgtaattaagc 600043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 28254514 - 28254427
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 88  Q
    |||||||||||||||||||||| |||||||| | |||||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  28254514 tagtttaaggacgattttgttcaatttaaaatagataggaccattttcgtgagttgatcaaaatggtaggaccaaaagtgtaattaag 28254427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 9797184 - 9797270
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 87  Q
    |||||||||||||||||| || ||||||||||| |||| | ||||||||||||||||||||||||||||||||||||||||||||||    
T  9797184 tagtttaaggacgattttatttgatttaaaaaagatagaaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 9797270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 35694335 - 35694421
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 87  Q
    |||||||||||||||||||||||||||||||||| ||||| |||||| ||||||| |||||||||| ||||||||||||||||||||    
T  35694335 tagtttaaggacgattttgttcgatttaaaaaatgtaggaccatttttgtgagttagtcaaaatggaaggaccaaaagtgtaattaa 35694421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 15255942 - 15255854
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||| ||||||||||||||||||||||| |  ||||| || |||||||||||||||||||||  ||||||||||||||||||||||    
T  15255942 tagtttagggacgattttgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagc 15255854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 16578553 - 16578641
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    |||||||| || ||||||||||||||| ||||| |||  | |||||||||||||| |||||||||||||||||||||||||||||||||    
T  16578553 tagtttaatgatgattttgttcgatttgaaaaagatataaccattttcgtgagttcgtcaaaatggtaggaccaaaagtgtaattaagc 16578641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 28254883 - 28254971
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||| ||||||||||||||||||||||| |  ||||| || |||||||||||||||||||||  ||||||||||||||||||||||    
T  28254883 tagtttagggacgattttgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagc 28254971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 42035861 - 42035773
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||| ||||||||||||||||||||||| |  ||| | ||||||||||||||||||||||||  ||||||||||||||||||||||    
T  42035861 tagtttatggacgattttgttcgatttaaaagaggtagaaccattttcgtgagttggtcaaaatgtgaggaccaaaagtgtaattaagc 42035773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 4 - 89
Target Start/End: Original strand, 35427272 - 35427357
Alignment:
Q  4 tttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    |||| ||||||||||||||| ||||||| |  ||| | ||||||||||||||||||||||||  ||||||||||||||||||||||    
T  35427272 tttagggacgattttgttcggtttaaaagaggtagaaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaagc 35427357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 7911073 - 7911161
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||| ||||||||||||||||||||||| |  ||| | ||||||||||||||||||||||||  ||||  ||||||||||||||||    
T  7911073 tagtttagggacgattttgttcgatttaaaagaggtagaaccattttcgtgagttggtcaaaatgcgaggattaaaagtgtaattaagc 7911161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 9796815 - 9796727
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||| ||| ||||||||||||||||||| |  ||||| || ||| |||||||||||||||||  ||||||||||||||||||||||    
T  9796815 tagtttatggatgattttgttcgatttaaaagaggtaggaccaattttgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagc 9796727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 18050048 - 18050143
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagctaaaata 96  Q
    ||||||| ||||||||||||||||||||||| |  || || || |||||||||||||||||||||  |||||||||| ||||||||| || |||||    
T  18050048 tagtttagggacgattttgttcgatttaaaagaggtatgaccaatttcgtgagttggtcaaaatgcaaggaccaaaaatgtaattaaacttaaata 18050143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 4 - 89
Target Start/End: Complemental strand, 16578194 - 16578109
Alignment:
Q  4 tttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    |||| ||||||||||||||||||||||| |  ||||| || |||||||||||||||||||||  || ||||||| |||||||||||    
T  16578194 tttagggacgattttgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaatgcaagaaccaaaaatgtaattaagc 16578109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 35693957 - 35693868
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagct 90  Q
    ||||||| |||||||||| |||||||||||| |  ||| ||||||||||| | ||||||||||||  |||| ||||||||||||||||||    
T  35693957 tagtttatggacgattttattcgatttaaaagaggtagaatcattttcgtaaattggtcaaaatgcaaggatcaaaagtgtaattaagct 35693868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 6115568 - 6115656
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||| ||||||||||||||||||||||| |  ||||| || ||||| ||||||||||||||   |||||||||||| |||||||||    
T  6115568 tagtttagggacgattttgttcgatttaaaagaggtaggaccaatttcgcgagttggtcaaaatacaaggaccaaaagtataattaagc 6115656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 34799540 - 34799628
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||| |||| |||||||||||||||||| |  ||||| || |||||| | ||||||||||||  ||||||||||||||||||||||    
T  34799540 tagtttagggacaattttgttcgatttaaaagaggtaggaccaatttcgttaattggtcaaaatgaaaggaccaaaagtgtaattaagc 34799628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 41260718 - 41260806
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||| ||||||||||||||||||||||| |  || ||||| |||||||||||| ||||||||  | |||||||||| |||||||||    
T  41260718 tagtttagggacgattttgttcgatttaaaagaggtatgatcaatttcgtgagttgatcaaaatgcaatgaccaaaagtataattaagc 41260806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 37 - 87
Target Start/End: Complemental strand, 35426895 - 35426845
Alignment:
Q  37 aggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 87  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||||||||    
T  35426895 aggaccattttcgtgagttggtcaaaatggtaggactaaaagtgtaattaa 35426845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 89
Target Start/End: Complemental strand, 599618 - 599533
Alignment:
Q  4 tttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    |||| ||| ||||||||||||||||||| |  || || || |||||||||||||||||||||  |||||||||| |||||||||||    
T  599618 tttagggatgattttgttcgatttaaaagaggtatgaccaatttcgtgagttggtcaaaatgcaaggaccaaaaatgtaattaagc 599533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 89
Target Start/End: Complemental strand, 7910702 - 7910617
Alignment:
Q  4 tttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    |||| ||||||||||||||||||||||| |  ||  | ||||||||||||||| ||||||||  |||||||||| |||||||||||    
T  7910702 tttagggacgattttgttcgatttaaaagaggtataaccattttcgtgagttgatcaaaatgtgaggaccaaaaatgtaattaagc 7910617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 42036229 - 42036293
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatg 65  Q
    ||||||| ||||||||||||||||||||||| |  || |||||||||||| ||||||||||||||    
T  42036229 tagtttagggacgattttgttcgatttaaaagaggtaagatcattttcgtaagttggtcaaaatg 42036293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 42 - 87
Target Start/End: Original strand, 28877387 - 28877432
Alignment:
Q  42 cattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 87  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||    
T  28877387 cattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 28877432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 5731269 - 5731356
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 88  Q
    ||||||| |||||||||||||||||||| ||||  ||| | || |||| ||||||||||||||||  | ||| |||||| ||||||||    
T  5731269 tagtttatggacgattttgttcgatttataaaaggtagaaccaatttcctgagttggtcaaaatgcaatgacaaaaagtataattaag 5731356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 28876992 - 28876910
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaa 83  Q
    ||||||| ||||||||||||||||||| ||| |   || || ||||||||||| || ||||||||  ||||||||||||||||    
T  28876992 tagtttagggacgattttgttcgatttgaaagaggcagaattattttcgtgagctgatcaaaatgcgaggaccaaaagtgtaa 28876910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 9930113 - 9930201
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||| |||||| ||||||||| |||| ||||    |||| || |||||||||| || ||||||   ||||||||||||||||||||||    
T  9930113 tagttgaaggaccattttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaatacgaggaccaaaagtgtaattaagc 9930201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 15 - 87
Target Start/End: Complemental strand, 18805238 - 18805167
Alignment:
Q  15 ttttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 87  Q
    ||||||||||||||||| | | || | |||||||||||| | |||||||||   |||||||||||||||||||    
T  18805238 ttttgttcgatttaaaagaga-agaaccattttcgtgagcttgtcaaaatgcagggaccaaaagtgtaattaa 18805167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 79; Significance: 1e-36; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 49951635 - 49951549
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 87  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  49951635 tagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 49951549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 2051384 - 2051296
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||||| ||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  2051384 tagtttaagaacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 2051296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 38535398 - 38535310
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  38535398 tagtttaaggacgattttgttcgatttaaaaaagataggaccattttcctgagttggtcaaaatggtaggaccaaaagtgtaattaagc 38535310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 41998318 - 41998230
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||||||||||||||    
T  41998318 tagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgcgagttggtcaaaatggtaggaccaaaagtgtaattaagc 41998230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 44676929 - 44677015
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 87  Q
    ||||||||||||||||||||||||||||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  44676929 tagtttaaggacgattttgttcgatttaaaaaagatatgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 44677015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 51473313 - 51473399
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 87  Q
    ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| |||||||||||||||    
T  51473313 tagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggatcaaaagtgtaattaa 51473399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 43678384 - 43678296
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||||||||||||||||||||||||||||| ||| || ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  43678384 tagtttaaggacgattttgttcgatttaaaaaagatatgaccatgttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 43678296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 49720818 - 49720906
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||||||||||||||||||||||||||||| ||| || ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  49720818 tagtttaaggacgattttgttcgatttaaaaaagatatgaccattttcgtgagttggtcaaaatagtaggaccaaaagtgtaattaagc 49720906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 51828415 - 51828503
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    |||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  51828415 tagtttaaggacaattttgttcgatttaaaaaatatatgaccattttcgtgagttggtcaaagtggtaggaccaaaagtgtaattaagc 51828503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 14654288 - 14654200
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    |||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| | |||||||||||||||||    
T  14654288 tagtttaaagacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtagtatcaaaagtgtaattaagc 14654200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 16701249 - 16701337
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    |||||||||||||||||||||||| |||||||| ||| || |||||||||||||||||||||||||||||||||||| |||||||||||    
T  16701249 tagtttaaggacgattttgttcgaattaaaaaagatatgaccattttcgtgagttggtcaaaatggtaggaccaaaaatgtaattaagc 16701337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 329935 - 329850
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaatta 86  Q
    |||||||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||| || ||||||||||||||||    
T  329935 tagtttaaggacgattttgttcgatttaaaaaagttaggaccattttcgtgagttggtcaaaatggaagaaccaaaagtgtaatta 329850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 55389694 - 55389609
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaatta 86  Q
    |||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||| |||||| |||||||||||||||||||    
T  55389694 tagtttaaggacgattttgttcgatttaaaaaaggtaggaccattttcgtgagttggtcgaaatgggaggaccaaaagtgtaatta 55389609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 47431785 - 47431697
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    |||||||| |||||||||||||||||||||| |  || || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  47431785 tagtttaaagacgattttgttcgatttaaaagaggtatgaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 47431697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 50662869 - 50662957
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||||||||||||||||||||||||||||| ||| ||  ||||||||||||| ||||||||||||||||||||||| |||||||||    
T  50662869 tagtttaaggacgattttgttcgatttaaaaaagatatgactattttcgtgagtttgtcaaaatggtaggaccaaaagtataattaagc 50662957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 32730846 - 32730933
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 88  Q
    |||||||||||||||||||||| |||||||||| |||||| ||||||| ||||||||| ||||||||| |||||||||||||||||||    
T  32730846 tagtttaaggacgattttgttcaatttaaaaaagataggaccattttcttgagttggttaaaatggtatgaccaaaagtgtaattaag 32730933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 46013880 - 46013968
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||||||||||||||||||||||||||||| |||| | |||||| | ||||||||||||||| ||| |||||||||||||||||||    
T  46013880 tagtttaaggacgattttgttcgatttaaaaaagatagaaccatttttgggagttggtcaaaatgatagtaccaaaagtgtaattaagc 46013968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 330293 - 330381
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||| ||||||||||||| |||||||||||  ||||| ||||||||||||||||||||||||  ||||||||| ||||||||||||    
T  330293 tagtttagggacgattttgtttgatttaaaaaaggtaggaccattttcgtgagttggtcaaaatgcgaggaccaaatgtgtaattaagc 330381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 34104727 - 34104639
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    |||||||| ||||||||||||| |||||||||| |||| | |||||||||||||||||||||||||||| || ||||||||||| ||||    
T  34104727 tagtttaatgacgattttgttcaatttaaaaaagatagaaccattttcgtgagttggtcaaaatggtagaacaaaaagtgtaatgaagc 34104639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 5 - 77
Target Start/End: Original strand, 39010482 - 39010554
Alignment:
Q  5 ttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaa 77  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| |||| |||||    
T  39010482 ttaaggacgattttgttcgatttaaaaaagataggatcattttcgtgagctggtcaaaatggcaggatcaaaa 39010554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 51828046 - 51827958
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||| ||||||||||||||||||||||| |  ||||| || |||||||||||||||||||||  ||||||||||||||||||||||    
T  51828046 tagtttagggacgattttgttcgatttaaaagagctaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagc 51827958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 51828997 - 51829085
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||||||||||||||||| || |||||||| ||| || ||||||||||||||| ||||||| ||| ||||||||||||||||||||    
T  51828997 tagtttaaggacgattttgtttgaattaaaaaagatacgaccattttcgtgagttgatcaaaatagtatgaccaaaagtgtaattaagc 51829085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 52237277 - 52237361
Alignment:
Q  4 tttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 88  Q
    |||| ||||||||||||||||||||||| |  ||||| ||||||||||||||||||||||||  |||||||||||||||||||||    
T  52237277 tttagggacgattttgttcgatttaaaagaggtaggaccattttcgtgagttggtcaaaatgtgaggaccaaaagtgtaattaag 52237361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 52375788 - 52375876
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||| |||||||||||||| |||||||| |  ||||| ||||||||||||||||||||||||  ||||||||||||||||||||||    
T  52375788 tagtttatggacgattttgttcaatttaaaagaggtaggaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaagc 52375876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 2 - 89
Target Start/End: Complemental strand, 40275181 - 40275094
Alignment:
Q  2 agtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    |||||| |||| |||||||||||||||||| |  ||||| ||||||||||||||||||||||||  ||||||||||||||||||||||    
T  40275181 agtttagggacaattttgttcgatttaaaagaggtaggaccattttcgtgagttggtcaaaatgtgaggaccaaaagtgtaattaagc 40275094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 22370685 - 22370599
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 87  Q
    ||||||| ||||||||||||| | |||||||||  ||||| ||||||||||||||||||||||||  ||||||||||||||||||||    
T  22370685 tagtttagggacgattttgtttggtttaaaaaaggtaggaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 22370599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 4 - 87
Target Start/End: Complemental strand, 16689444 - 16689361
Alignment:
Q  4 tttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 87  Q
    |||| ||||||||||||||||||||||| |  ||||| || ||||||||||||||||||||| ||||||||||| |||||||||    
T  16689444 tttatggacgattttgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaatgctaggaccaaaactgtaattaa 16689361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 30513810 - 30513724
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 88  Q
    ||||||||| |||||||| |||||||||||||| |||||| |||||||||||||| |||||||||  |||||||||| ||||||||||    
T  30513810 tagtttaag-acgattttattcgatttaaaaaagataggaccattttcgtgagtttgtcaaaatgcaaggaccaaaaatgtaattaag 30513724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 49952003 - 49952098
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagctaaaata 96  Q
    |||||||| |||||||||||||||||||||| |  || || || |||||||||||||||||||||  |||||||||| ||||||||||| ||||||    
T  49952003 tagtttaatgacgattttgttcgatttaaaagaggtaagaccaatttcgtgagttggtcaaaatgcaaggaccaaaaatgtaattaagccaaaata 49952098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 40839109 - 40839195
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 87  Q
    ||||||| ||||||||||||||||||||||| |  || || |||||||||||||| |||||||||  ||||||||||||||||||||    
T  40839109 tagtttagggacgattttgttcgatttaaaagaggtaagaccattttcgtgagtttgtcaaaatgtgaggaccaaaagtgtaattaa 40839195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 4 - 89
Target Start/End: Complemental strand, 49720457 - 49720372
Alignment:
Q  4 tttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    |||| ||||||||||||||||||||||| |  ||||| || |||||||||||||||||||||  |||| |||||||||||||||||    
T  49720457 tttagggacgattttgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggatcaaaagtgtaattaagc 49720372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 14654646 - 14654734
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||| ||||||||||||||||||||||| |  |||   || |||||||||||||||||||||  ||||||||||||||||||||||    
T  14654646 tagtttacggacgattttgttcgatttaaaagaggtagagccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagc 14654734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 9 - 89
Target Start/End: Complemental strand, 25534971 - 25534891
Alignment:
Q  9 ggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||||||||||||||||||| |  ||||| ||||||| ||| ||||||||||||  ||||||||||||||||||||||    
T  25534971 ggacgattttgttcgatttaaaagaggtaggaccattttcatgaattggtcaaaatgcgaggaccaaaagtgtaattaagc 25534891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 36701195 - 36701107
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||| ||||||||||||||||||| ||| |   | |||||||||||||||||| ||||||||  ||||||||||||||||||||||    
T  36701195 tagtttatggacgattttgttcgatttgaaagaggcatgatcattttcgtgagttgatcaaaatgcgaggaccaaaagtgtaattaagc 36701107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 40275551 - 40275638
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    |||||||  |||||||||||||||||||||| |  ||||| ||||| ||||||||||||||||||  ||||||||||||||||||||||    
T  40275551 tagtttagagacgattttgttcgatttaaaagaggtaggaccattt-cgtgagttggtcaaaatgtgaggaccaaaagtgtaattaagc 40275638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 41998693 - 41998773
Alignment:
Q  9 ggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||||||||||||||||||| |  ||||| || |||||| ||||||||||||||  ||||||||||||||||||||||    
T  41998693 ggacgattttgttcgatttaaaagaggtaggaccaatttcgtaagttggtcaaaatgcaaggaccaaaagtgtaattaagc 41998773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 55390054 - 55390142
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    |||||||  |||||||||||| |||||||||||  ||||| ||||||||||| ||||| ||||||  ||||||||||||||||||||||    
T  55390054 tagtttagtgacgattttgtttgatttaaaaaaggtaggaccattttcgtgaattggttaaaatgcgaggaccaaaagtgtaattaagc 55390142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 40838741 - 40838655
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 87  Q
    ||||||| ||||||||||||| ||||||||| |  || || ||||||||||||||||||||||||  |||| |||||||||||||||    
T  40838741 tagtttatggacgattttgtttgatttaaaagaggtatgaccattttcgtgagttggtcaaaatgcgaggatcaaaagtgtaattaa 40838655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 44676561 - 44676467
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagctaaaat 95  Q
    ||||||| ||||| ||||||||||||||||| |  || ||||| |||| |||||| |||||||||  |||||||||||||||||||||| |||||    
T  44676561 tagtttagggacggttttgttcgatttaaaagaggtatgatcaatttcatgagtttgtcaaaatgcaaggaccaaaagtgtaattaagccaaaat 44676467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 4 - 89
Target Start/End: Complemental strand, 46013508 - 46013423
Alignment:
Q  4 tttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    |||| ||||||||||||||||||||||| |  || || || |||||||||||||||||||||  |||| |||||||||||||||||    
T  46013508 tttagggacgattttgttcgatttaaaagaggtatgaccaatttcgtgagttggtcaaaatgcaaggatcaaaagtgtaattaagc 46013423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 52375416 - 52375323
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagctaaaa 94  Q
    ||||||| |||||||||||||| |||||||| |  || || ||||||||||| ||||| ||||||  |||||||||||||||||||||| ||||    
T  52375416 tagtttagggacgattttgttcaatttaaaagaggtatgaccattttcgtgaattggttaaaatgtgaggaccaaaagtgtaattaagccaaaa 52375323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 43678741 - 43678829
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||| ||||||||||||||||||||||| |  | ||| ||  ||||||||||| ||||||||  ||||||||||||||||||||||    
T  43678741 tagtttatggacgattttgttcgatttaaaagaggttggaccaagttcgtgagttgatcaaaatgcaaggaccaaaagtgtaattaagc 43678829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 51828628 - 51828540
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||| ||||||||||||||||||||||| |  || || || |||||| | ||||||||||||  ||||||||||||||||||||||    
T  51828628 tagtttacggacgattttgttcgatttaaaagaggtaagaccaatttcgtaatttggtcaaaatgcaaggaccaaaagtgtaattaagc 51828540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 36701553 - 36701640
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 88  Q
    ||||||| ||| ||||||||||||||| ||| | | | || |||||||||||| |||||||||||  |||||||||||||||||||||    
T  36701553 tagtttagggatgattttgttcgatttgaaagagacatgaccattttcgtgagctggtcaaaatgcgaggaccaaaagtgtaattaag 36701640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 52236905 - 52236818
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 88  Q
    ||||||| ||||||||||||||||||||||| |  || || ||||||||||| ||| ||||||||  ||||| |||||||||||||||    
T  52236905 tagtttagggacgattttgttcgatttaaaagaggtatgaccattttcgtgaattgttcaaaatgcgaggactaaaagtgtaattaag 52236818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 32730478 - 32730392
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 87  Q
    ||||||| |||||||||||||| |||||||| |  ||||| || ||||  |||||||||||||||  ||||||||||||||||||||    
T  32730478 tagtttagggacgattttgttcaatttaaaagaggtaggaccaatttcaagagttggtcaaaatgcaaggaccaaaagtgtaattaa 32730392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 89
Target Start/End: Complemental strand, 2044357 - 2044272
Alignment:
Q  4 tttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    |||| ||||||||||||||||||||||| |  || || ||||||| ||||||||||||||||  || |||||||||| ||||||||    
T  2044357 tttatggacgattttgttcgatttaaaagaggtatgaccattttcatgagttggtcaaaatgcgagaaccaaaagtgaaattaagc 2044272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 33412611 - 33412699
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||| ||||||||||||||||||  ||| | | || | |||||||||||| || ||||||||  ||||||||||||||||||||||    
T  33412611 tagtttagggacgattttgttcgattcgaaagagacagaaccattttcgtgagctgatcaaaatgcgaggaccaaaagtgtaattaagc 33412699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 34105107 - 34105190
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaat 84  Q
    ||||||| ||||||||||||||||||||||| |   |||| ||  ||||| ||||||||||||||  |||||||||||||||||    
T  34105107 tagtttagggacgattttgttcgatttaaaagagggaggaccaacttcgtaagttggtcaaaatgcaaggaccaaaagtgtaat 34105190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 89
Target Start/End: Complemental strand, 39010163 - 39010076
Alignment:
Q  2 agtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    |||||||| || |||||||||||||||||| |  || || || ||| |||||||||||||||||  |||||||||| |||||||||||    
T  39010163 agtttaagaacaattttgttcgatttaaaagaggtatgagcaattttgtgagttggtcaaaatgcaaggaccaaaaatgtaattaagc 39010076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 38535752 - 38535840
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||| |||||||||| |||||||||||| | || |||  | |||||| ||||||||||||||   ||||||||||| |||||||||    
T  38535752 tagtttagggacgattttattcgatttaaaagagatcggactaatttcgtaagttggtcaaaatgcacggaccaaaagtataattaagc 38535840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 2 - 90
Target Start/End: Original strand, 43222848 - 43222936
Alignment:
Q  2 agtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagct 90  Q
    |||||| ||||||||||||||||||||||| |   | || |||||||||| | | |||||||||  |||||||||||||| ||||||||    
T  43222848 agtttagggacgattttgttcgatttaaaagaggcatgaccattttcgtgcgcttgtcaaaatgcgaggaccaaaagtgtgattaagct 43222936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 42 - 89
Target Start/End: Original strand, 27200189 - 27200236
Alignment:
Q  42 cattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    |||||||||||| |||||||||||  ||||||||||||||||||||||    
T  27200189 cattttcgtgagctggtcaaaatgcaaggaccaaaagtgtaattaagc 27200236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 42 - 89
Target Start/End: Complemental strand, 49407844 - 49407797
Alignment:
Q  42 cattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    |||||||||||| |||||||||||  ||||||||||||||||||||||    
T  49407844 cattttcgtgagctggtcaaaatgcgaggaccaaaagtgtaattaagc 49407797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 90
Target Start/End: Original strand, 37076138 - 37076220
Alignment:
Q  8 aggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagct 90  Q
    |||||||||||||||||||| ||| |    ||| |||||||||||| || ||||||||  |||||||||| ||||||||||||    
T  37076138 aggacgattttgttcgatttgaaagaggcgggaccattttcgtgagctgatcaaaatgcgaggaccaaaaatgtaattaagct 37076220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 40490743 - 40490792
Alignment:
Q  16 tttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatg 65  Q
    ||||||||||||||||||| || ||||| |||||||| ||||||||||||    
T  40490743 tttgttcgatttaaaaaatgtatgatcaatttcgtgaattggtcaaaatg 40490792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 4 - 89
Target Start/End: Complemental strand, 51472941 - 51472856
Alignment:
Q  4 tttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    |||| |||| |||||||| ||||||||| |  |||||  | |||| ||||||||||||||||  |||||||||||| |||||||||    
T  51472941 tttagggacaattttgtttgatttaaaagaggtaggaaaaatttcatgagttggtcaaaatgcaaggaccaaaagtataattaagc 51472856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 37075739 - 37075687
Alignment:
Q  37 aggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    |||| ||||||||||||||||||||||||    ||||||||||||||||||||    
T  37075739 aggaccattttcgtgagttggtcaaaatgcggagaccaaaagtgtaattaagc 37075687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 50900984 - 50901072
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||| ||||| |||||||||||||  || |   |||  |||||| ||||| |||||||||||  ||||||||||||||||||||||    
T  50900984 tagtttagggacggttttgttcgatttgtaagaggcagggccatttttgtgagctggtcaaaatgcgaggaccaaaagtgtaattaagc 50901072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 42 - 89
Target Start/End: Original strand, 49408279 - 49408326
Alignment:
Q  42 cattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    |||||||||||| |||||||||||  || |||||||||||||||||||    
T  49408279 cattttcgtgagatggtcaaaatgcgagtaccaaaagtgtaattaagc 49408326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 27199791 - 27199705
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 87  Q
    |||||||  |||| ||||||||||||| ||| |   | || |||||||||||| |||||||||||  |||||||||| |||||||||    
T  27199791 tagtttagtgacggttttgttcgatttgaaagaggcatgaccattttcgtgagctggtcaaaatgcgaggaccaaaaatgtaattaa 27199705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 8 - 88
Target Start/End: Complemental strand, 50900614 - 50900534
Alignment:
Q  8 aggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 88  Q
    |||||| ||||||||||||| ||| |  ||||| |||||||||||| || |||||||   | |||||||||| ||||||||    
T  50900614 aggacggttttgttcgatttgaaagagttaggaccattttcgtgagctgatcaaaatttgaagaccaaaagtttaattaag 50900534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 77; Significance: 2e-35; HSPs: 2)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 46725 - 46813
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    |||||||| |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  46725 tagtttaaagacgattttgttcgatttaaaatatataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 46813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 46355 - 46267
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||| ||| ||||||||||||||||||| |  ||| | ||||||||| ||||||||||||||  ||||||||||||| ||||||||    
T  46355 tagtttagggatgattttgttcgatttaaaagaggtagaaccattttcgtaagttggtcaaaatgcgaggaccaaaagtgcaattaagc 46267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 77; Significance: 2e-35; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 28290101 - 28290189
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||||||||||||||||||||||||||||  |||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  28290101 tagtttaaggacgattttgttcgatttaaaaatgataggaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 28290189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 8419077 - 8419165
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    |||||||||||||||||||||| |||||||||| |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  8419077 tagtttaaggacgattttgttcaatttaaaaaagataggaccatattcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 8419165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 18149822 - 18149734
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||| |||||||||||||||||    
T  18149822 tagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtccaaatggtaggatcaaaagtgtaattaagc 18149734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 19291445 - 19291352
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagctaaaa 94  Q
    ||||||||||||||||||||||||||||||||| |||||| |||||| |||||||| ||||||| |||||||||||||||||||||||| ||||    
T  19291445 tagtttaaggacgattttgttcgatttaaaaaagataggaccatttttgtgagttgttcaaaatagtaggaccaaaagtgtaattaagccaaaa 19291352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 15029766 - 15029854
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    |||||||||||||||||||||||||||||||||  || || ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  15029766 tagtttaaggacgattttgttcgatttaaaaaaggtaagaccattttcgtgagttggtcaaaatgggaggaccaaaagtgtaattaagc 15029854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 10 - 87
Target Start/End: Complemental strand, 14340478 - 14340401
Alignment:
Q  10 gacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 87  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||| |||||||||||||||||||| |||||||||    
T  14340478 gacgattttgttcgatttaaaaaagataggaccattttcgtgagttgatcaaaatggtaggaccaaaaatgtaattaa 14340401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 15115549 - 15115637
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||||||||||||||||||||||||||| |  ||||| ||||||||||||||||||||||||  |||| |||||||||||||||||    
T  15115549 tagtttaaggacgattttgttcgatttaaaagaggtaggaccattttcgtgagttggtcaaaatgtgaggatcaaaagtgtaattaagc 15115637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 4 - 86
Target Start/End: Complemental strand, 38900730 - 38900648
Alignment:
Q  4 tttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaatta 86  Q
    |||| ||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  38900730 tttagggacgattttgttcgatttaaaagaggtaggatcattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaatta 38900648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 38901097 - 38901190
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagctaaaa 94  Q
    ||||||||||||||||||||||||||||||||   ||||| ||||||||||  || |||||||||| |||||||||||||||||||||| ||||    
T  38901097 tagtttaaggacgattttgttcgatttaaaaagggtaggaccattttcgtgctttagtcaaaatggaaggaccaaaagtgtaattaagccaaaa 38901190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 39083447 - 39083361
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 88  Q
    ||||||||| || |||||||||||||||||||| |||||| |||||||||||||||||||||||| ||||| | ||||||||||||||    
T  39083447 tagtttaagaacaattttgttcgatttaaaaaaaataggaccattttcgtgagttggtcaaaatgataggatc-aaagtgtaattaag 39083361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 4967228 - 4967316
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||| ||||||||||||||||||||||| |  || || |||||| |||||||||||||||||  ||||||||||||||||||||||    
T  4967228 tagtttagggacgattttgttcgatttaaaagaggtaagaccatttttgtgagttggtcaaaatgtgaggaccaaaagtgtaattaagc 4967316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 32697683 - 32697771
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||| |||||||| |||||||||||||| |  ||||| || |||||||||||||||||||||  | ||||||||||||||||||||    
T  32697683 tagtttagggacgattctgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaatgcaatgaccaaaagtgtaattaagc 32697771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 4966905 - 4966819
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 87  Q
    ||||||| ||||||||||||||||||||||| |   || |  |||||||||||||||||||||||  ||||||||||||||||||||    
T  4966905 tagtttagggacgattttgttcgatttaaaagaggcagtactattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 4966819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 14340867 - 14340953
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 87  Q
    ||||||| ||||||||||||||||||||||| || || || || |||||||||||||||||||||  || ||||||| |||||||||    
T  14340867 tagtttatggacgattttgttcgatttaaaagatgtatgaccaatttcgtgagttggtcaaaatgcaagtaccaaaaatgtaattaa 14340953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 21370775 - 21370689
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 87  Q
    |||||||| |||||||||||||||||||||||| |||  | ||||||||| ||||||||||||| ||||||| |||| | |||||||    
T  21370775 tagtttaaagacgattttgttcgatttaaaaaagatataaccattttcgtcagttggtcaaaatagtaggacaaaaaatataattaa 21370689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 16752671 - 16752583
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||| ||||||||||||||||||| ||| |   | ||||||||||||||| |||||||||||   |||||||||||||||||||||    
T  16752671 tagtttatggacgattttgttcgatttgaaagaagcatgatcattttcgtgagctggtcaaaatgcagggaccaaaagtgtaattaagc 16752583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 22651768 - 22651856
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||| ||||||||||||||||||| |||||   || | |||||||||||| |||||||||||  ||||| ||||||||||||||||    
T  22651768 tagtttatggacgattttgttcgatttgaaaaaggcagaaccattttcgtgagctggtcaaaatgcgaggacaaaaagtgtaattaagc 22651856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 10721868 - 10721787
Alignment:
Q  8 aggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    |||||||||||||||||||| ||| | | | || |||||||||||| |||||||||||  |||||||||| |||||||||||    
T  10721868 aggacgattttgttcgatttgaaagagacaagaccattttcgtgagctggtcaaaatgtgaggaccaaaaatgtaattaagc 10721787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 89
Target Start/End: Complemental strand, 28289770 - 28289685
Alignment:
Q  4 tttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    |||| ||||||||||||||||||||||| |  || ||  | |||||||||||||||||||||  |||| |||||||||||||||||    
T  28289770 tttagggacgattttgttcgatttaaaagaggtatgactaatttcgtgagttggtcaaaatgcaaggatcaaaagtgtaattaagc 28289685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 17260677 - 17260765
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||| ||| | ||||||||||||| ||| |  ||| ||||||||||||| ||||||||||||  ||||||||||||| ||||||||    
T  17260677 tagtttagggatggttttgttcgatttgaaagaggtagaatcattttcgtgaattggtcaaaatgcgaggaccaaaagtgcaattaagc 17260765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 21371153 - 21371241
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||| ||||||||||||| ||||||||| |  ||||| || |||  ||||||||||||||||  |||| |||||||||||||||||    
T  21371153 tagtttagggacgattttgtttgatttaaaagaggtaggaccaattttatgagttggtcaaaatgcaaggatcaaaagtgtaattaagc 21371241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 41834523 - 41834604
Alignment:
Q  8 aggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    |||||| ||||||||||| | ||| |   |||| |||||||||||| |||||||||||  ||||||||||||||||||||||    
T  41834523 aggacggttttgttcgatctgaaagaggcaggaccattttcgtgagctggtcaaaatgcgaggaccaaaagtgtaattaagc 41834604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 18150181 - 18150269
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||| ||| ||||||||||||||||||| |  ||||| || ||||||||||| ||||||||   |||| || ||||||||||||||    
T  18150181 tagtttagggatgattttgttcgatttaaaagaggtaggaccaatttcgtgagtttgtcaaaatacaaggatcacaagtgtaattaagc 18150269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 20266372 - 20266458
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 87  Q
    ||||||| ||||||||||||||||||| ||| | | | || ||||||||| || ||||||||||   ||||||||||||| ||||||    
T  20266372 tagtttagggacgattttgttcgatttgaaagagacatgaccattttcgtaagctggtcaaaatacgaggaccaaaagtgcaattaa 20266458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 27307517 - 27307610
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagctaaaa 94  Q
    ||||||| ||||| ||||||||||||| ||| |   || | |||||||||||  |||||||||||   ||||||||||| ||||||||||||||    
T  27307517 tagtttatggacggttttgttcgatttgaaagagggagaaccattttcgtgaactggtcaaaatgcggggaccaaaagtctaattaagctaaaa 27307610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 42 - 88
Target Start/End: Original strand, 16753068 - 16753114
Alignment:
Q  42 cattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 88  Q
    ||||||||||||||||||||||||  | |||||||| ||||||||||    
T  16753068 cattttcgtgagttggtcaaaatgcgatgaccaaaaatgtaattaag 16753114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 27307143 - 27307062
Alignment:
Q  8 aggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    |||| |||||||||| |||| ||| | | | || ||||||| | ||||||||||||||  || |||||||||||||||||||    
T  27307143 aggatgattttgttcaatttgaaagaaacatgaccattttcataagttggtcaaaatgcgagaaccaaaagtgtaattaagc 27307062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 42 - 90
Target Start/End: Complemental strand, 28494892 - 28494844
Alignment:
Q  42 cattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagct 90  Q
    ||||||| |||  |||||||||||  |||||||||||||||||||||||    
T  28494892 cattttcctgaactggtcaaaatgtaaggaccaaaagtgtaattaagct 28494844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 32305907 - 32305843
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatg 65  Q
    ||||||| ||||||||||||||||||||||| |  ||| |  ||||||||||| || ||||||||    
T  32305907 tagtttagggacgattttgttcgatttaaaagaggtagaacaattttcgtgagctgatcaaaatg 32305843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 77; Significance: 2e-35; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 37505156 - 37505068
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||||||||||||||||||||||||||||| |||| | ||||||||||||||||||||||||||||||||||||||||||||||||    
T  37505156 tagtttaaggacgattttgttcgatttaaaaaagatagaaccattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 37505068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 34555839 - 34555926
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 88  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  34555839 tagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaatggtaggactaaaagtgtaattaag 34555926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 10279004 - 10279092
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||| ||||||| |||||||||||||||||    
T  10279004 tagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttggtcaaaacggtaggatcaaaagtgtaattaagc 10279092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 29439379 - 29439465
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 87  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||| ||||||    
T  29439379 tagtttaaggacgattttgttcgatttaaaaaagataggatcattttcgtgagttgatcaaaatggtgggaccaaaagtgcaattaa 29439465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 21938652 - 21938566
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 87  Q
    ||||||| ||||||||||||||||||||||||| ||| |||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  21938652 tagtttatggacgattttgttcgatttaaaaaagataagatcattttcgtgagttgatcaaaatggtaagaccaaaagtgtaattaa 21938566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 50305242 - 50305328
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 87  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||||| ||||||||| |||||||||| |||||||||||||||||    
T  50305242 tagtttaaggacgattttgttcgatttaaaaaagataggaccattttcatgagttggttaaaatggtagaaccaaaagtgtaattaa 50305328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 9992244 - 9992155
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtc-aaaatggtaggaccaaaagtgtaattaagc 89  Q
    |||||||||||| |||||||||||||||||||| |||||| ||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  9992244 tagtttaaggaccattttgttcgatttaaaaaagataggaccatttccgtgagttggtcaaaaatggtaggaccaaaagtgtaattaagc 9992155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 37421401 - 37421488
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaat-ataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 87  Q
    |||||||||||||||||||||||||||||||||  |||||| ||||||||||||||||||||||||||| ||| ||||||||||||||    
T  37421401 tagtttaaggacgattttgttcgatttaaaaaaagataggaccattttcgtgagttggtcaaaatggtatgactaaaagtgtaattaa 37421488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 9992612 - 9992700
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||||| ||||||||||||||||||||||| |||||| ||||||| |||||| |||||||||  ||||||||||||||||||||||    
T  9992612 tagtttaagcacgattttgttcgatttaaaaaagataggaccattttcatgagtttgtcaaaatgcaaggaccaaaagtgtaattaagc 9992700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 30787255 - 30787343
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||||||||||||||||||||||| ||||| ||| || ||||||||||||||| || ||||||||||| |||||||||||||||||    
T  30787255 tagtttaaggacgattttgttcgattttaaaaagatatgaccattttcgtgagttgatctaaatggtaggatcaaaagtgtaattaagc 30787343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 10278637 - 10278550
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 88  Q
    ||||||| ||||||||||||||||||||||| |  |||||||| |||||||||||||||||||||  |||||||||||||||||||||    
T  10278637 tagtttagggacgattttgttcgatttaaaagaggtaggatcaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaag 10278550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 29439019 - 29438931
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||| ||||||||||||||||||||||| |  ||||| || |||||||||||||||||||||  ||||||||||||||||||||||    
T  29439019 tagtttagggacgattttgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagc 29438931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 44582516 - 44582603
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 88  Q
    |||||||| |||||||||||||||||| ||||  ||| || ||||||||||||||| |||||||||||| ||||||||||||||||||    
T  44582516 tagtttaaagacgattttgttcgatttgaaaatgatatgaccattttcgtgagttgatcaaaatggtagaaccaaaagtgtaattaag 44582603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 17641826 - 17641912
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 87  Q
    ||||||| ||||||||||||||||||||||| |  || || ||||||||||||||||||||||||  ||||||||||||||||||||    
T  17641826 tagtttagggacgattttgttcgatttaaaagaggtatgaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaa 17641912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 44954683 - 44954772
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagct 90  Q
    ||||||| ||| ||||||||| |||||||||||  || |||||||||| ||||||||||||||||  |||||||||||||||||||||||    
T  44954683 tagtttatggatgattttgtttgatttaaaaaaggtatgatcattttcatgagttggtcaaaatgcgaggaccaaaagtgtaattaagct 44954772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 1837594 - 1837506
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||| |||| |||||||||||||||||| | ||| ||||| |||||||||||| ||||||||  ||||||||||||||||||||||    
T  1837594 tagtttagggacaattttgttcgatttaaaagagatatgatcaatttcgtgagttgatcaaaatgcaaggaccaaaagtgtaattaagc 1837506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 16299139 - 16299226
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    |||||||||||||||||||||| ||| |||||| |||||| |||||||| |||||| ||||||||||||||| |||||| |||||||||    
T  16299139 tagtttaaggacgattttgttcaattaaaaaaa-ataggaccattttcgcgagttgatcaaaatggtaggacaaaaagtataattaagc 16299226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 2868000 - 2867913
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 88  Q
    |||||||| ||| |||||||||||||||||| | ||| |||||||||||||||||||||||||||  | |||||||| ||||||||||    
T  2868000 tagtttaacgacaattttgttcgatttaaaagagatatgatcattttcgtgagttggtcaaaatgcgatgaccaaaattgtaattaag 2867913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 50304528 - 50304441
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 88  Q
    |||||||  |||||||||||||||||||||| |  || || ||||||||||||||||||||||||  |||||||||||||||||||||    
T  50304528 tagtttagagacgattttgttcgatttaaaagaggtatgaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaag 50304441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 30786861 - 30786772
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatca-ttttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||| ||||||||||||||||||||||| |  ||||| || ||||||||||||||||||||||  || |||||||||||||||||||    
T  30786861 tagtttagggacgattttgttcgatttaaaagaggtaggaccaattttcgtgagttggtcaaaatgcaagaaccaaaagtgtaattaagc 30786772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 2868173 - 2868253
Alignment:
Q  9 ggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||||||||||||||||||| |  ||||| |||||||||| |||||||||||||  |||| |||||||||||||||||    
T  2868173 ggacgattttgttcgatttaaaagaggtaggaccattttcgtgtgttggtcaaaatgtgaggatcaaaagtgtaattaagc 2868253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 4080110 - 4080026
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaatt 85  Q
    ||||||| ||||||||||||||||||||||| |  || ||||| ||||||||||||||||| |||  ||||||||||||||||||    
T  4080110 tagtttagggacgattttgttcgatttaaaataggtacgatcaatttcgtgagttggtcaagatgcaaggaccaaaagtgtaatt 4080026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 8229726 - 8229638
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    |||||||  ||||||||| |||||||||||| || ||| ||||||||||||||||| ||||||||  |||| |||||||||||||||||    
T  8229726 tagtttagagacgattttattcgatttaaaagatgtagaatcattttcgtgagttgatcaaaatgtgaggatcaaaagtgtaattaagc 8229638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 52335967 - 52336055
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||| ||||||||||||||||||||||| |  ||||| || |||| |||||||||||||||| ||| |||||||| ||||||||||    
T  52335967 tagtttagggacgattttgttcgatttaaaagaggtaggaccaatttcatgagttggtcaaaatgatagaaccaaaagagtaattaagc 52336055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 23340261 - 23340178
Alignment:
Q  12 cgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagctaaaat 95  Q
    |||||||||||||||||||| | |||||| || |||||||||||||||||||||  | || ||||||||||||||||| |||||    
T  23340261 cgattttgttcgatttaaaagagataggaccaatttcgtgagttggtcaaaatgcaatgatcaaaagtgtaattaagccaaaat 23340178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 50926319 - 50926232
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 88  Q
    ||||||| ||||||||||||||||||| ||| |  || ||| ||||||||||| |||||||||||| |||||||||| ||||||||||    
T  50926319 tagtttagggacgattttgttcgatttgaaagaggtatgattattttcgtgagctggtcaaaatgggaggaccaaaactgtaattaag 50926232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 39485154 - 39485068
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 87  Q
    ||||||| ||||||||||||||||||| ||| |  ||||| |||||||||||| | |||||||||  ||||||||||||||||||||    
T  39485154 tagtttagggacgattttgttcgatttgaaagaggtaggaccattttcgtgagctagtcaaaatgcgaggaccaaaagtgtaattaa 39485068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 44582137 - 44582059
Alignment:
Q  10 gacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 88  Q
    |||||||||||||||||||||| |  ||||| || |||||| ||||||||||||||  |||||||||||||||||||||    
T  44582137 gacgattttgttcgatttaaaagaggtaggaccaatttcgttagttggtcaaaatgtaaggaccaaaagtgtaattaag 44582059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 45048244 - 45048158
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 87  Q
    ||||||| |||||||||||||| |||||||| |  ||| | ||||||||| ||||||||||||||  ||||||||||||||||||||    
T  45048244 tagtttatggacgattttgttcaatttaaaagaggtagaaccattttcgtaagttggtcaaaatgcaaggaccaaaagtgtaattaa 45048158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 16298771 - 16298682
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagct 90  Q
    ||||||| ||||||||||||||||||||||| |  || || || |||||||||||||||||||||  ||| |||||| ||||||||||||    
T  16298771 tagtttagggacgattttgttcgatttaaaagaggtatgaccaatttcgtgagttggtcaaaatgcaagggccaaaaatgtaattaagct 16298682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 34555468 - 34555380
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||| ||||||||||||||||||||||| |  ||| | || ||||| ||||| |||||||||  ||||||||||||||||||||||    
T  34555468 tagtttagggacgattttgttcgatttaaaagaggtagcaccaatttcgcgagttagtcaaaatgcaaggaccaaaagtgtaattaagc 34555380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 4 - 87
Target Start/End: Complemental strand, 6224783 - 6224700
Alignment:
Q  4 tttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 87  Q
    ||||||||||||||||||||||||||||||   || | ||||||  |||||||||||||||| ||||| ||||| |||||||||    
T  6224783 tttaaggacgattttgttcgatttaaaaaaacaagaaccatttttatgagttggtcaaaatgataggatcaaaaatgtaattaa 6224700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 4 - 87
Target Start/End: Complemental strand, 44954312 - 44954229
Alignment:
Q  4 tttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 87  Q
    ||||| |||||||||||| |||||||||||  || || |||||||||||||||||||||||||  |||| |||| |||||||||    
T  44954312 tttaaagacgattttgttggatttaaaaaaggtatgaccattttcgtgagttggtcaaaatgggtggacaaaaaatgtaattaa 44954229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 37421249 - 37421163
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 87  Q
    ||||||| ||||||||||||||||||||||| |  || || || |||||||| ||||||||||||  | ||||||||||||||||||    
T  37421249 tagtttagggacgattttgttcgatttaaaagaggtaagaccaatttcgtgaattggtcaaaatgcaaagaccaaaagtgtaattaa 37421163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 13 - 90
Target Start/End: Complemental strand, 23526735 - 23526658
Alignment:
Q  13 gattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagct 90  Q
    ||||||||||||||||||| |   |||| |||||||||||| |||||||||||  |||||||||||||||| ||||||    
T  23526735 gattttgttcgatttaaaagaggcaggaccattttcgtgagctggtcaaaatgtgaggaccaaaagtgtaactaagct 23526658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 37505524 - 37505617
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagctaaaa 94  Q
    ||||||| ||||||||||||| | ||||||| | ||| ||||| ||||||||||||||||||||   |||||||||| | ||||||||| ||||    
T  37505524 tagtttatggacgattttgtttgttttaaaagagatatgatcaatttcgtgagttggtcaaaataaaaggaccaaaaatataattaagccaaaa 37505617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 50926698 - 50926786
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||| ||||| ||||||||||||| ||| | |  ||| |||||||||||| |||||||||||  | ||||||||||||||||||||    
T  50926698 tagtttagggacggttttgttcgatttgaaagagacgggaccattttcgtgagctggtcaaaatgcgatgaccaaaagtgtaattaagc 50926786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 4 - 89
Target Start/End: Original strand, 29021325 - 29021410
Alignment:
Q  4 tttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    |||| ||||||||||||||||||| ||| |   | || |||||||||||| |||||||||||  ||||||||||||| ||||||||    
T  29021325 tttagggacgattttgttcgatttgaaagaggcatgaacattttcgtgagctggtcaaaatgtgaggaccaaaagtgcaattaagc 29021410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 8230098 - 8230184
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 87  Q
    ||||||| ||||||||||||||||||||||| |  ||  | ||||||||||| | ||||||||||  || ||||||| |||||||||    
T  8230098 tagtttagggacgattttgttcgatttaaaagaggtataaccattttcgtgaataggtcaaaatgcgagaaccaaaaatgtaattaa 8230184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 444008 - 444096
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||| | ||||||||||||||||||||| |  || ||  | |||||||||||||||||||||  | || ||||||| |||||||||    
T  444008 tagtttaggaacgattttgttcgatttaaaagaggtatgacaaatttcgtgagttggtcaaaatgcaaagatcaaaagtataattaagc 444096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 17088596 - 17088684
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||| ||||| ||||||| ||||| ||| |   | || |||||||||||| || ||||||||  ||||||||||||||||||||||    
T  17088596 tagtttagggacggttttgtttgatttgaaagaggcatgaccattttcgtgagctgttcaaaatgagaggaccaaaagtgtaattaagc 17088684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 44802672 - 44802716
Alignment:
Q  45 tttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||||| |||||||||||  ||||||||||||||||||||||    
T  44802672 tttcgtgagctggtcaaaatgcaaggaccaaaagtgtaattaagc 44802716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 44291390 - 44291303
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 88  Q
    ||||||| |||||||||||||| |||| ||| |   |  | |||||||||||| |||||||||||  ||||||||||||| |||||||    
T  44291390 tagtttatggacgattttgttcaatttgaaagaggcataaccattttcgtgagctggtcaaaatgtgaggaccaaaagtgcaattaag 44291303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 87
Target Start/End: Original strand, 45048599 - 45048678
Alignment:
Q  8 aggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 87  Q
    |||||| ||||||||||||  ||| |  || || |||||||||||  |||||||||||  ||||||||||||||||||||    
T  45048599 aggacggttttgttcgattggaaagaggtatgaccattttcgtgaactggtcaaaatgcgaggaccaaaagtgtaattaa 45048678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 25274845 - 25274760
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaatta 86  Q
    ||||||| | ||| ||||||||||||| ||| |   | || |||||||||||| |||||||||||  ||||||||||||| |||||    
T  25274845 tagtttaggaacggttttgttcgatttgaaagaggcatgaccattttcgtgagctggtcaaaatgcgaggaccaaaagtgcaatta 25274760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 1744382 - 1744330
Alignment:
Q  36 taggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 88  Q
    ||||||||||| |||||||| ||||||||   | |||||||||||||||||||    
T  1744382 taggatcatttacgtgagtttgtcaaaatacgaagaccaaaagtgtaattaag 1744330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 39843497 - 39843569
Alignment:
Q  17 ttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||||||| |||||   |||| || ||||||||||||||| |||||  |||||| |||||||||| ||||    
T  39843497 ttgttcgatttgaaaaaggcaggaccaatttcgtgagttggtctaaatgcgaggaccgaaagtgtaataaagc 39843569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 7 - 87
Target Start/End: Complemental strand, 50419473 - 50419393
Alignment:
Q  7 aaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 87  Q
    |||||| | |||||||||||| ||||| | | || |||||| ||||||||||  |||||  ||||||||||||| ||||||    
T  50419473 aaggactactttgttcgatttgaaaaagacatgaccatttttgtgagttggtttaaatgcgaggaccaaaagtgcaattaa 50419393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 52235161 - 52235213
Alignment:
Q  37 aggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||| |||||||||||||| |||||   |||| |||||||||||||||||    
T  52235161 aggatcagtttcgtgagttggttaaaatctgaggatcaaaagtgtaattaagc 52235213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 73; Significance: 4e-33; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 25472470 - 25472558
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||||||||||||||||||||||||||||| ||| || |||||||||||||||||||||||||||||| |||||||||||||||||    
T  25472470 tagtttaaggacgattttgttcgatttaaaaaagataagaccattttcgtgagttggtcaaaatggtaggatcaaaagtgtaattaagc 25472558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 24640642 - 24640728
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 87  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| |||||||||||||||||||||| |||||||    
T  24640642 tagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttgatcaaaatggtaggaccaaaagtataattaa 24640728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 5114557 - 5114469
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| |||||||||||||| ||||| |||||||||||    
T  5114557 tagtttaaggacgattttgttcgatttaaaaaagataggaccattttcgtgagttgatcaaaatggtaggatcaaaaatgtaattaagc 5114469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 31573810 - 31573721
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaata-taggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||||| ||||||||||||||||||||||| | |||||  ||||||||||||||||||||||||||||||||||||| |||||||||    
T  31573810 tagtttaagaacgattttgttcgatttaaaaaaaaataggactattttcgtgagttggtcaaaatggtaggaccaaaagtataattaagc 31573721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 30251149 - 30251237
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||||||||||||||||||||||||||||| ||| ||  ||||| |||||||||||||||| |||||| |||||||||||||||||    
T  30251149 tagtttaaggacgattttgttcgatttaaaaaagatatgacaatttttgtgagttggtcaaaatagtaggatcaaaagtgtaattaagc 30251237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 25468938 - 25468852
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 87  Q
    ||||||| ||||||||||||||||||||||| | ||| || || |||||||||||||||||||||  ||||||||||||||||||||    
T  25468938 tagtttagggacgattttgttcgatttaaaagagatatgaccaatttcgtgagttggtcaaaatgtaaggaccaaaagtgtaattaa 25468852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 5120926 - 5121014
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||| ||||||||||||||||||||||| |  |||||  | |||||||||||||||||||||  ||||||||||||||||||||||    
T  5120926 tagtttagggacgattttgttcgatttaaaagaggtaggaataatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagc 5121014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 29891537 - 29891629
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaa-aaatata---ggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    |||||||||||||||||||||| ||||||| ||||| |   ||| |||||||  |||||||||||||||||||||||||||||||||||||||    
T  29891537 tagtttaaggacgattttgttcaatttaaataaataaaaaaggaccattttcacgagttggtcaaaatggtaggaccaaaagtgtaattaagc 29891629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 31073222 - 31073144
Alignment:
Q  11 acgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||||||||||||||||||| |||||| ||||||| || ||||||||||||   ||||||||||||||||||||||    
T  31073222 acgattttgttcgatttaaaaaagataggaccattttcatgtgttggtcaaaattaaaggaccaaaagtgtaattaagc 31073144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 31574182 - 31574270
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||| ||||||||||||||||||||||| |  || ||  | |||||||||||||||||||||  ||||||||||||||||||||||    
T  31574182 tagtttagggacgattttgttcgatttaaaagaggtatgactaatttcgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagc 31574270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 31073599 - 31073687
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||| |||| |||||||||||||||||| |  || || || ||||||||| |||||||||||  ||||||||||||||||||||||    
T  31073599 tagtttagggacaattttgttcgatttaaaagaggtatgaccaatttcgtgagctggtcaaaatgcaaggaccaaaagtgtaattaagc 31073687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 18 - 87
Target Start/End: Complemental strand, 31242878 - 31242809
Alignment:
Q  18 tgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 87  Q
    ||||||||||||||||   |||||||||||||||||||||||||||||  |||  |||||||||||||||    
T  31242878 tgttcgatttaaaaaaggcaggatcattttcgtgagttggtcaaaatgcgagggtcaaaagtgtaattaa 31242809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 22534217 - 22534269
Alignment:
Q  37 aggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    |||| |||||||||||||||||||||||   ||||||||||||||||||||||    
T  22534217 aggaccattttcgtgagttggtcaaaatacgaggaccaaaagtgtaattaagc 22534269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 28636381 - 28636293
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||| | ||||||||||||||||||||| |  || || || ||||||||||||||||||||   | |||||||| |||||||||||    
T  28636381 tagtttaggaacgattttgttcgatttaaaagaagtaagaccaatttcgtgagttggtcaaaatacaatgaccaaaaatgtaattaagc 28636293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 29891169 - 29891081
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||| ||||| ||||||||| ||||||| |  || ||||| |||||| |||| |||||||||  |||| |||||||||||||||||    
T  29891169 tagtttagggacgcttttgttcggtttaaaagaggtatgatcaatttcgtaagttagtcaaaatgtaaggaacaaaagtgtaattaagc 29891081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 2 - 94
Target Start/End: Original strand, 32836454 - 32836546
Alignment:
Q  2 agtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagctaaaa 94  Q
    |||||||| ||| ||||||||||||| ||| |   | || |||||||||||| |||||||||||  ||||| |||||||||||||||| ||||    
T  32836454 agtttaagaacggttttgttcgatttgaaagaggcatgaccattttcgtgagctggtcaaaatgcaaggactaaaagtgtaattaagccaaaa 32836546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 35163644 - 35163732
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||| ||||||||||||| ||||| ||| |   || | |||||||||||| |||||||||||   |||||||||||||||||||||    
T  35163644 tagtttagggacgattttgtttgatttgaaagaggcagaaccattttcgtgagctggtcaaaatgcggggaccaaaagtgtaattaagc 35163732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 36 - 95
Target Start/End: Complemental strand, 30250775 - 30250716
Alignment:
Q  36 taggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagctaaaat 95  Q
    ||||| || |||||||||||||||||||||  |||||||||| ||||||||||| |||||    
T  30250775 taggaccaatttcgtgagttggtcaaaatgcaaggaccaaaattgtaattaagcaaaaat 30250716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 426 - 461
Target Start/End: Original strand, 14721257 - 14721292
Alignment:
Q  426 taagaaaattgcataattcactataattatatgtgt 461  Q
    |||||||||| |||||||||||||||||||||||||    
T  14721257 taagaaaattacataattcactataattatatgtgt 14721292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 87
Target Start/End: Complemental strand, 35163266 - 35163187
Alignment:
Q  8 aggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 87  Q
    |||||| ||||||||||||| ||| | | | || |||||| ||||| |||||||||||  ||||| ||||||||||||||    
T  35163266 aggacggttttgttcgatttgaaagagacaagaccatttttgtgagctggtcaaaatgcgaggactaaaagtgtaattaa 35163187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0712 (Bit Score: 62; Significance: 2e-26; HSPs: 2)
Name: scaffold0712
Description:

Target: scaffold0712; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 4 - 89
Target Start/End: Complemental strand, 6478 - 6393
Alignment:
Q  4 tttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    |||||||||||||||||||||||||||||| |||| | ||||||| ||||||| ||||||||||||||||||||||| ||||||||    
T  6478 tttaaggacgattttgttcgatttaaaaaagatagtaccattttcatgagttgatcaaaatggtaggaccaaaagtgcaattaagc 6393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0712; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 6853 - 6939
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 87  Q
    ||||||| | ||||||||||||||||||||| || || || || |||||| | ||||||||||||  ||||||||||| ||||||||    
T  6853 tagtttaggtacgattttgttcgatttaaaagatgtaagaccaatttcgtaaattggtcaaaatgcaaggaccaaaagagtaattaa 6939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0709 (Bit Score: 62; Significance: 2e-26; HSPs: 2)
Name: scaffold0709
Description:

Target: scaffold0709; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 4 - 89
Target Start/End: Complemental strand, 6496 - 6411
Alignment:
Q  4 tttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    |||||||||||||||||||||||||||||| |||| | ||||||| ||||||| ||||||||||||||||||||||| ||||||||    
T  6496 tttaaggacgattttgttcgatttaaaaaagatagtaccattttcatgagttgatcaaaatggtaggaccaaaagtgcaattaagc 6411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0709; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 6871 - 6957
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaa 87  Q
    ||||||| | ||||||||||||||||||||| || || || || |||||| | ||||||||||||  ||||||||||| ||||||||    
T  6871 tagtttaggtacgattttgttcgatttaaaagatgtaagaccaatttcgtaaattggtcaaaatgcaaggaccaaaagagtaattaa 6957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 210794 - 210882
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaagc 89  Q
    ||||||| ||||| ||||||||||||| ||| |   |||| ||||||| ||||||||||||||||  ||||||||||||||||||||||    
T  210794 tagtttagggacggttttgttcgatttgaaagaggcaggaccattttcatgagttggtcaaaatgtgaggaccaaaagtgtaattaagc 210882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 205824 - 205911
Alignment:
Q  1 tagtttaaggacgattttgttcgatttaaaaaatataggatcattttcgtgagttggtcaaaatggtaggaccaaaagtgtaattaag 88  Q
    ||||||| ||||| ||||||||||||| ||| |   |||| ||||||||||||||||||||||||  ||||| |||||||||||||||    
T  205824 tagtttagggacggttttgttcgatttgaaagaggcaggaccattttcgtgagttggtcaaaatgtgaggactaaaagtgtaattaag 205911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University