View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4966_low_9 (Length: 297)
Name: NF4966_low_9
Description: NF4966
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4966_low_9 |
 | |
|
| [»] scaffold0257 (1 HSPs) |
| | |
|
Alignment Details
Target: scaffold0257 (Bit Score: 276; Significance: 1e-154; HSPs: 1)
Name: scaffold0257
Description:
Target: scaffold0257; HSP #1
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 1 - 276
Target Start/End: Original strand, 18337 - 18612
Alignment:
| Q |
1 |
gcatgaacttgtcgaaaatgttcctggtttagaaataccaacaaatccagatgtaatttgcaggccatgtcaaattccattagatatttaatggatgtaa |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18337 |
gcatgaacttgtcgaaaatgttcctggtttagaaataccaacaaatccagatgtaatttgcaggccatgtcaaattccattagatatttaatggatgtaa |
18436 |
T |
|
| Q |
101 |
ttaatatttgatcattaatgcttatgttcttgttacaggagttgatgaatgaaaaatcgatgcagcaacaacgtccacttggagaaactgatattgccgt |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18437 |
ttaatatttgatcattaatgcttatgttcttgttacaggagttgatgaatgaaaaatcgatgcagcaacaacgtccacttggagaaactgatattgccgt |
18536 |
T |
|
| Q |
201 |
caaaccttctcaggtaaatcatgtaatatcctacaaccgcattgtgcatataaagctaaacaaaaggcatttccct |
276 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18537 |
caaaccttctcaggtaaatcatgtaatatcctacaaccgcattgtgcatataaagctaaacaaaaggcatttccct |
18612 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 138; Significance: 4e-72; HSPs: 21)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 1 - 257
Target Start/End: Complemental strand, 28510026 - 28509767
Alignment:
| Q |
1 |
gcatgaacttgtcgaaaatgttcctggtttagaaataccaacaaatccagatgtaatttgcaggccatgtcaaattccattagatatttaatggatgtaa |
100 |
Q |
| |
|
|||||||||||| ||||||||||||| ||||||||||||||||||| || | || |||| |||||||||||||||| ||||| || ||||||||||| |
|
|
| T |
28510026 |
gcatgaacttgtggaaaatgttcctgatttagaaataccaacaaattcaaaagtgatttccaggccatgtcaaattgtgttagaatttgaatggatgtaa |
28509927 |
T |
|
| Q |
101 |
ttaatatttga---tcattaatgcttatgttcttgttacaggagttgatgaatgaaaaatcgatgcagcaacaacgtccacttggagaaactgatattgc |
197 |
Q |
| |
|
|||||| ||| | |||||||||||||| ||||||||||||||||||||||||| |||||||| |||||||||||| |||||||||| | ||| ||| |
|
|
| T |
28509926 |
ttaatagctgaagataattaatgcttatgtgcttgttacaggagttgatgaatgaacaatcgatggagcaacaacgtctacttggagaagccgattctgc |
28509827 |
T |
|
| Q |
198 |
cgtcaaaccttctcaggtaaatcatgtaatatcctacaaccgcattgtgcatataaagct |
257 |
Q |
| |
|
|||||||||||||||||||||||| |||||||| ||| |||||||||||||||||||||| |
|
|
| T |
28509826 |
cgtcaaaccttctcaggtaaatcaagtaatatcgtaccaccgcattgtgcatataaagct |
28509767 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 260
Target Start/End: Original strand, 28184781 - 28185043
Alignment:
| Q |
1 |
gcatgaacttgtcgaaaatgttcctggtttagaaataccaacaaatccagatgtaatttgcaggccatgtcaaattccattagatatttaatggatgtaa |
100 |
Q |
| |
|
|||||||||||| ||||||||||||| ||||||||||||||||||| || | || |||| |||||||||||||| | | ||||| |||||||||||||| |
|
|
| T |
28184781 |
gcatgaacttgtggaaaatgttcctgatttagaaataccaacaaattcaaaagtgatttccaggccatgtcaaactgcgttagaattttaatggatgtaa |
28184880 |
T |
|
| Q |
101 |
ttaatattt---gatcattaatgcttatgttcttgttacaggagttgatgaatgaaaaatcgatgcagcaacaacgtccacttggagaaactgatattgc |
197 |
Q |
| |
|
|||||| | |||||||| ||||| ||||||||||||||||||||||||||||| |||| ||| |||| ||||||| |||||||||| |||||| | | |
|
|
| T |
28184881 |
ttaatagctgaagatcattattgcttctgttcttgttacaggagttgatgaatgaacaatcaatggagcagcaacgtctacttggagaacctgatactac |
28184980 |
T |
|
| Q |
198 |
cgtcaaaccttctcaggtaaatcatgtaatatcctacaaccgcattgtgcatataaagctaaa |
260 |
Q |
| |
|
|||||||||||||||||||||||||||||| || ||| ||||| ||||||||||||||||||| |
|
|
| T |
28184981 |
cgtcaaaccttctcaggtaaatcatgtaatgtcgtaccaccgcgttgtgcatataaagctaaa |
28185043 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 80 - 276
Target Start/End: Original strand, 28148993 - 28149192
Alignment:
| Q |
80 |
ttagatatttaatggatgtaattaatattt---gatcattaatgcttatgttcttgttacaggagttgatgaatgaaaaatcgatgcagcaacaacgtcc |
176 |
Q |
| |
|
||||||||||||| |||| |||||||| | |||||||||||| ||||||||||||||||||||||||||||||| ||| ||| | ||||||||| | |
|
|
| T |
28148993 |
ttagatatttaattgatgcaattaatagctgaagatcattaatgcctatgttcttgttacaggagttgatgaatgaacgatcaatggaccaacaacgttc |
28149092 |
T |
|
| Q |
177 |
acttggagaaactgatattgccgtcaaaccttctcaggtaaatcatgtaatatcctacaaccgcattgtgcatataaagctaaacaaaaggcatttccct |
276 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28149093 |
acttggagaaactgatactgccgtcaaaccttctcaggtaaatcatgtaatatcgtaccaccgcattgtgcatataaagctaaacaaaaggcatttccct |
28149192 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 1 - 257
Target Start/End: Complemental strand, 28480843 - 28480584
Alignment:
| Q |
1 |
gcatgaacttgtcgaaaatgttcctggtttagaaataccaacaaatccagatgtaatttgcaggccatgtcaaattccattagatatttaatggatgtaa |
100 |
Q |
| |
|
|||||||||||| ||||||||| ||| ||||||||||||||||||| || | || |||| |||||||||||||||| ||||| || ||||||||||| |
|
|
| T |
28480843 |
gcatgaacttgtggaaaatgttactgatttagaaataccaacaaattcaaaagtgatttccaggccatgtcaaattgtgttagaatttgaatggatgtaa |
28480744 |
T |
|
| Q |
101 |
ttaatatttga---tcattaatgcttatgttcttgttacaggagttgatgaatgaaaaatcgatgcagcaacaacgtccacttggagaaactgatattgc |
197 |
Q |
| |
|
|||||| ||| | |||||||||||||| |||||||||||||||||||||| || |||| ||| |||||||||||| |||||||||| | |||| | | |
|
|
| T |
28480743 |
ttaatagctgaagataattaatgcttatgtgcttgttacaggagttgatgaatcaacaatctatggagcaacaacgtctacttggagaagccgatactcc |
28480644 |
T |
|
| Q |
198 |
cgtcaaaccttctcaggtaaatcatgtaatatcctacaaccgcattgtgcatataaagct |
257 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||| ||||||||||||||| |||||| |
|
|
| T |
28480643 |
cgtcaaaccttctcaggtaaatcatgtaatatcgtaccaccgcattgtgcataaaaagct |
28480584 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 260
Target Start/End: Original strand, 28082719 - 28082981
Alignment:
| Q |
1 |
gcatgaacttgtcgaaaatgttcctggtttagaaataccaacaaatccagatgtaatttgcaggccatgtcaaattccattagatatttaatggatgtaa |
100 |
Q |
| |
|
|||||||||||| ||||||||||||| ||||||||||||||||||| || | || |||| ||||||||||| |||| | ||||| |||||||||||| | |
|
|
| T |
28082719 |
gcatgaacttgtggaaaatgttcctgatttagaaataccaacaaattcaaaagtgatttccaggccatgtcgaattgccttagaattttaatggatgtta |
28082818 |
T |
|
| Q |
101 |
ttaatatttga---tcattaatgcttatgttcttgttacaggagttgatgaatgaaaaatcgatgcagcaacaacgtccacttggagaaactgatattgc |
197 |
Q |
| |
|
| ||| ||| || ||||||||| ||||||||| ||||||||||||||||||| || | ||| | |||||||||| | ||||||||||||||| ||| |
|
|
| T |
28082819 |
tgaatcgctgaagatcgttaatgcttctgttcttgtaacaggagttgatgaatgaacaaacaatggaccaacaacgtctagttggagaaactgatactgc |
28082918 |
T |
|
| Q |
198 |
cgtcaaaccttctcaggtaaatcatgtaatatcctacaaccgcattgtgcatataaagctaaa |
260 |
Q |
| |
|
||||||||||| |||||||||||||| |||||| ||| | ||||||||||||||||||||| |
|
|
| T |
28082919 |
cgtcaaaccttttcaggtaaatcatgcaatatcataccaatacattgtgcatataaagctaaa |
28082981 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 193
Target Start/End: Original strand, 28160229 - 28160424
Alignment:
| Q |
1 |
gcatgaacttgtcgaaaatgttcctggtttagaaataccaacaaatccagatgtaatttgcaggccatgtcaaattccattagatatttaatggatgtaa |
100 |
Q |
| |
|
|||||||||||| ||||||||||| | ||||||||||||||||||| || | || |||| |||||||||||||| | | ||||| |||||||||||||| |
|
|
| T |
28160229 |
gcatgaacttgtggaaaatgttcccgatttagaaataccaacaaattcaaaagtgatttccaggccatgtcaaactgcgttagaattttaatggatgtaa |
28160328 |
T |
|
| Q |
101 |
ttaatattt---gatcattaatgcttatgttcttgttacaggagttgatgaatgaaaaatcgatgcagcaacaacgtccacttggagaaactgata |
193 |
Q |
| |
|
|||||| | |||||||| ||||| ||||||||||||||||||||||||||||| |||||||| | || ||||||| |||||||||| |||||| |
|
|
| T |
28160329 |
ttaatagctgaagatcattattgcttctgttcttgttacaggagttgatgaatgaacaatcgatggaacagcaacgtctacttggagaacctgata |
28160424 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 110 - 226
Target Start/End: Original strand, 28134729 - 28134845
Alignment:
| Q |
110 |
gatcattaatgcttatgttcttgttacaggagttgatgaatgaaaaatcgatgcagcaacaacgtccacttggagaaactgatattgccgtcaaaccttc |
209 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||| ||| | ||||||||| |||||||||||||||||| | ||||||||||||| |
|
|
| T |
28134729 |
gatcattaatgcttatgttcttgttacaggagttgatgaatgaacaatcaatggaccaacaacgttcacttggagaaactgatacttccgtcaaaccttc |
28134828 |
T |
|
| Q |
210 |
tcaggtaaatcatgtaa |
226 |
Q |
| |
|
||||||||||| ||||| |
|
|
| T |
28134829 |
tcaggtaaatcgtgtaa |
28134845 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 3 - 260
Target Start/End: Original strand, 28054398 - 28054652
Alignment:
| Q |
3 |
atgaacttgtcgaaaatgttcctggtttagaaataccaacaaatccagatgtaatttgcaggccatgtcaaattccattagatatttaatggatgtaatt |
102 |
Q |
| |
|
|||||||| | ||||||||||| |||| ||||||||||||| |||| ||||||||||||||||| |||||||||||| |||||||||||||||||| |
|
|
| T |
28054398 |
atgaacttattgaaaatgttccatatttaaaaataccaacaaactcagaagtaatttgcaggccatggaaaattccattagttatttaatggatgtaatt |
28054497 |
T |
|
| Q |
103 |
aata---tttgatcattaatgcttatgttcttgttacaggagttgatgaatgaaaaatcgatgcagcaacaacgtccacttggagaaactgatattgccg |
199 |
Q |
| |
|
|||| |||| |||| |||| ||||||| ||||| ||| ||||| || |||| |||||| | || | ||||||||| ||||| ||||| |
|
|
| T |
28054498 |
aatagcggaagatcgttaaagcttttgttcttattaca------gatccatgaactattgatgaagcaacttcatcaatttggagaaattgatactgccg |
28054591 |
T |
|
| Q |
200 |
tcaaaccttctcaggtaaatcatgtaatatcctacaaccgcattgtgcatataaagctaaa |
260 |
Q |
| |
|
|||||||||||||||||||||||||| ||| ||| || |||| |||||||||||| |||| |
|
|
| T |
28054592 |
tcaaaccttctcaggtaaatcatgtattattgtaccactgcatcgtgcatataaagataaa |
28054652 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 3 - 260
Target Start/End: Original strand, 28064823 - 28065077
Alignment:
| Q |
3 |
atgaacttgtcgaaaatgttcctggtttagaaataccaacaaatccagatgtaatttgcaggccatgtcaaattccattagatatttaatggatgtaatt |
102 |
Q |
| |
|
|||||||| | ||||||||||| |||| ||||||||||||| |||| ||||||||||||||||| |||||||||||| |||||||||||||||||| |
|
|
| T |
28064823 |
atgaacttattgaaaatgttccatatttaaaaataccaacaaactcagaagtaatttgcaggccatggaaaattccattagttatttaatggatgtaatt |
28064922 |
T |
|
| Q |
103 |
aata---tttgatcattaatgcttatgttcttgttacaggagttgatgaatgaaaaatcgatgcagcaacaacgtccacttggagaaactgatattgccg |
199 |
Q |
| |
|
|||| |||| |||| |||| ||||||| ||||| ||| ||||| || |||| |||||| | || | ||||||||| ||||| ||||| |
|
|
| T |
28064923 |
aatagcggaagatcgttaaagcttttgttcttattaca------gatccatgaactattgatgaagcaacttcatcaatttggagaaattgatactgccg |
28065016 |
T |
|
| Q |
200 |
tcaaaccttctcaggtaaatcatgtaatatcctacaaccgcattgtgcatataaagctaaa |
260 |
Q |
| |
|
|||||||||||||||||||||||||| ||| ||| || |||| |||||||||||| |||| |
|
|
| T |
28065017 |
tcaaaccttctcaggtaaatcatgtattattgtaccactgcatcgtgcatataaagataaa |
28065077 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 123 - 260
Target Start/End: Original strand, 27979596 - 27979733
Alignment:
| Q |
123 |
tatgttcttgttacaggagttgatgaatgaaaaatcgatgcagcaacaacgtccacttggagaaactgatattgccgtcaaaccttctcaggtaaatcat |
222 |
Q |
| |
|
||||||||| ||||||||||||||| ||||| || ||| ||||||||||||||||||||||||||||| | ||||||||||||||| | |||| || |
|
|
| T |
27979596 |
tatgttcttattacaggagttgatggatgaacaacaaatggagcaacaacgtccacttggagaaactgatgctaccgtcaaaccttctccagaaaataat |
27979695 |
T |
|
| Q |
223 |
gtaatatcctacaaccgcattgtgcatataaagctaaa |
260 |
Q |
| |
|
||||||| ||| ||| ||||||| ||||||||||||| |
|
|
| T |
27979696 |
gtaatatagtaccacctcattgtgaatataaagctaaa |
27979733 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 123 - 260
Target Start/End: Original strand, 11420153 - 11420290
Alignment:
| Q |
123 |
tatgttcttgttacaggagttgatgaatgaaaaatcgatgcagcaacaacgtccacttggagaaactgatattgccgtcaaaccttctcaggtaaatcat |
222 |
Q |
| |
|
||||||| | ||||||||||||||||||||| || | ||| ||||||||||||||||||| ||||||||| | |||||||||||| |||| |||| |
|
|
| T |
11420153 |
tatgttcatattacaggagttgatgaatgaacaaccaatggagcaacaacgtccacttggtgaaactgatgctaccgtcaaacctttgcaggaaaataca |
11420252 |
T |
|
| Q |
223 |
gtaatatcctacaaccgcattgtgcatataaagctaaa |
260 |
Q |
| |
|
||||||| ||| | | ||||||||||||||| ||||| |
|
|
| T |
11420253 |
gtaatatagtaccatctcattgtgcatataaaactaaa |
11420290 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 123 - 260
Target Start/End: Original strand, 28151056 - 28151193
Alignment:
| Q |
123 |
tatgttcttgttacaggagttgatgaatgaaaaatcgatgcagcaacaacgtccacttggagaaactgatattgccgtcaaaccttctcaggtaaatcat |
222 |
Q |
| |
|
||||||||| |||||||||||||||||||| || ||| ||||| |||||| || |||||||| |||| | |||||||||||||||| | |||| || |
|
|
| T |
28151056 |
tatgttcttactacaggagttgatgaatgaacaagaaatggagcaaaaacgtctacgtggagaaattgatgctaccgtcaaaccttctcaagaaaataat |
28151155 |
T |
|
| Q |
223 |
gtaatatcctacaaccgcattgtgcatataaagctaaa |
260 |
Q |
| |
|
||||||| ||| ||| ||||||||||||||| ||||| |
|
|
| T |
28151156 |
gtaatatagtaccacctcattgtgcatataaatctaaa |
28151193 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 260
Target Start/End: Original strand, 27919514 - 27919605
Alignment:
| Q |
169 |
caacgtccacttggagaaactgatattgccgtcaaaccttctcaggtaaatcatgtaatatcctacaaccgcattgtgcatataaagctaaa |
260 |
Q |
| |
|
||||||||||||||||||| ||||| | |||||||||||||||| | |||| ||||||||| ||| ||| ||||||| ||||||||||||| |
|
|
| T |
27919514 |
caacgtccacttggagaaattgatactaccgtcaaaccttctcaagaaaataatgtaatatagtaccacctcattgtgaatataaagctaaa |
27919605 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 137 - 260
Target Start/End: Original strand, 28003328 - 28003451
Alignment:
| Q |
137 |
aggagttgatgaatgaaaaatcgatgcagcaacaacgtccacttggagaaactgatattgccgtcaaaccttctcaggtaaatcatgtaatatcctacaa |
236 |
Q |
| |
|
||||||||||||||||| || ||| ||||| |||||| |||||||||||||||| | |||||||||||||||| | |||| ||||||||| ||| | |
|
|
| T |
28003328 |
aggagttgatgaatgaacaagaaatggagcaaaaacgtctacttggagaaactgatgctaccgtcaaaccttctcaagaaaataatgtaatatagtacca |
28003427 |
T |
|
| Q |
237 |
ccgcattgtgcatataaagctaaa |
260 |
Q |
| |
|
|| ||| ||||||||||| ||||| |
|
|
| T |
28003428 |
cctcatcgtgcatataaatctaaa |
28003451 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 196 - 260
Target Start/End: Original strand, 28161137 - 28161201
Alignment:
| Q |
196 |
gccgtcaaaccttctcaggtaaatcatgtaatatcctacaaccgcattgtgcatataaagctaaa |
260 |
Q |
| |
|
|||||||||||||||||||||||||||||||| || || ||||| ||||||||||||||||||| |
|
|
| T |
28161137 |
gccgtcaaaccttctcaggtaaatcatgtaatgtcgtaacaccgcgttgtgcatataaagctaaa |
28161201 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 190 - 250
Target Start/End: Complemental strand, 28507104 - 28507044
Alignment:
| Q |
190 |
gatattgccgtcaaaccttctcaggtaaatcatgtaatatcctacaaccgcattgtgcata |
250 |
Q |
| |
|
|||| ||||||||||||||||| |||||||||||||||||| ||| ||| ||||||||||| |
|
|
| T |
28507104 |
gatactgccgtcaaaccttctccggtaaatcatgtaatatcgtaccaccacattgtgcata |
28507044 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 166 - 254
Target Start/End: Complemental strand, 26114141 - 26114053
Alignment:
| Q |
166 |
caacaacgtccacttggagaaactgatattgccgtcaaaccttctcaggtaaatcatgtaatatcctacaaccgcattgtgcatataaa |
254 |
Q |
| |
|
||||||| |||||||||||||||||||| | || ||||||||||||| | | || ||||||||| ||| | | ||||||||||||||| |
|
|
| T |
26114141 |
caacaacatccacttggagaaactgatactaccatcaaaccttctcaagaagataatgtaatatagtaccatctcattgtgcatataaa |
26114053 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 172 - 260
Target Start/End: Original strand, 28036606 - 28036694
Alignment:
| Q |
172 |
cgtccacttggagaaactgatattgccgtcaaaccttctcaggtaaatcatgtaatatcctacaaccgcattgtgcatataaagctaaa |
260 |
Q |
| |
|
||||||||||||||||||||| | |||||||| |||||| | |||| | ||||||| ||| ||| ||||||||||||||||||||| |
|
|
| T |
28036606 |
cgtccacttggagaaactgatgctaccgtcaaagcttctccagaaaataacgtaatatagtaccacctcattgtgcatataaagctaaa |
28036694 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 229
Target Start/End: Complemental strand, 17745397 - 17745345
Alignment:
| Q |
177 |
acttggagaaactgatattgccgtcaaaccttctcaggtaaatcatgtaatat |
229 |
Q |
| |
|
|||||||||||||||| | |||||||||||||||||| |||| ||||||||| |
|
|
| T |
17745397 |
acttggagaaactgatgctaccgtcaaaccttctcaggaaaataatgtaatat |
17745345 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 229
Target Start/End: Complemental strand, 19046717 - 19046665
Alignment:
| Q |
177 |
acttggagaaactgatattgccgtcaaaccttctcaggtaaatcatgtaatat |
229 |
Q |
| |
|
|||||||||||||||| | |||||||||||||||||| |||| ||||||||| |
|
|
| T |
19046717 |
acttggagaaactgatgctaccgtcaaaccttctcaggaaaataatgtaatat |
19046665 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 229
Target Start/End: Complemental strand, 27459810 - 27459748
Alignment:
| Q |
167 |
aacaacgtccacttggagaaactgatattgccgtcaaaccttctcaggtaaatcatgtaatat |
229 |
Q |
| |
|
||||| ||||||||| |||||||||| | ||||||||||||||||| |||| ||||||||| |
|
|
| T |
27459810 |
aacaatgtccacttgcagaaactgatgctagcgtcaaaccttctcaggaaaataatgtaatat |
27459748 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 111; Significance: 5e-56; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 110 - 260
Target Start/End: Complemental strand, 8693052 - 8692902
Alignment:
| Q |
110 |
gatcattaatgcttatgttcttgttacaggagttgatgaatgaaaaatcgatgcagcaacaacgtccacttggagaaactgatattgccgtcaaaccttc |
209 |
Q |
| |
|
|||||||||||||| |||||||||||||||| |||||||||||| |||||||| | ||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
8693052 |
gatcattaatgcttctgttcttgttacaggaattgatgaatgaacaatcgatggacaaacaacgtccacttggagaaactgatattgccggcaaaccttc |
8692953 |
T |
|
| Q |
210 |
tcaggtaaatcatgtaatatcctacaaccgcattgtgcatataaagctaaa |
260 |
Q |
| |
|
||||||||||||||||||||| ||| || |||||||||||||||||||||| |
|
|
| T |
8692952 |
tcaggtaaatcatgtaatatcgtaccactgcattgtgcatataaagctaaa |
8692902 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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