View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4968_low_14 (Length: 320)

Name: NF4968_low_14
Description: NF4968
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4968_low_14
NF4968_low_14
[»] chr7 (55 HSPs)
chr7 (69-316)||(42177093-42177340)
chr7 (89-303)||(36514303-36514517)
chr7 (86-304)||(28628025-28628246)
chr7 (109-305)||(43282373-43282576)
chr7 (112-288)||(47848659-47848838)
chr7 (69-146)||(30200039-30200116)
chr7 (73-154)||(45601598-45601679)
chr7 (231-285)||(27021932-27021986)
chr7 (231-304)||(27893788-27893859)
chr7 (69-175)||(32368412-32368518)
chr7 (231-304)||(39811926-39811999)
chr7 (86-182)||(38135305-38135401)
chr7 (69-176)||(24549763-24549870)
chr7 (95-166)||(30814772-30814843)
chr7 (231-310)||(37439581-37439660)
chr7 (64-166)||(29653616-29653718)
chr7 (231-310)||(30200203-30200278)
chr7 (71-136)||(1569156-1569221)
chr7 (69-146)||(12966146-12966223)
chr7 (231-304)||(35906441-35906514)
chr7 (245-302)||(36136735-36136792)
chr7 (86-167)||(40830311-40830392)
chr7 (231-304)||(41948485-41948558)
chr7 (86-159)||(44401217-44401290)
chr7 (231-302)||(19262673-19262742)
chr7 (231-278)||(38920789-38920836)
chr7 (235-302)||(45841225-45841291)
chr7 (107-165)||(14593871-14593929)
chr7 (69-159)||(22174117-22174207)
chr7 (231-305)||(28020932-28021006)
chr7 (231-304)||(37617913-37617987)
chr7 (231-304)||(6374837-6374910)
chr7 (231-288)||(12841515-12841572)
chr7 (231-304)||(13859248-13859321)
chr7 (231-304)||(34869389-34869462)
chr7 (231-304)||(45836720-45836793)
chr7 (231-304)||(46014420-46014493)
chr7 (246-303)||(48736154-48736211)
chr7 (231-304)||(49029245-49029318)
chr7 (85-165)||(19119515-19119594)
chr7 (235-304)||(26742140-26742210)
chr7 (86-142)||(28858179-28858235)
chr7 (73-125)||(40139027-40139079)
chr7 (231-303)||(42187440-42187512)
chr7 (86-176)||(41461196-41461289)
chr7 (260-303)||(48202959-48203002)
chr7 (107-165)||(16013394-16013452)
chr7 (86-128)||(30664716-30664758)
chr7 (245-304)||(47796390-47796451)
chr7 (231-304)||(36102005-36102078)
chr7 (231-304)||(39906610-39906683)
chr7 (245-285)||(1523812-1523852)
chr7 (86-122)||(30144929-30144965)
chr7 (106-182)||(37595764-37595840)
chr7 (192-283)||(45558352-45558446)
[»] chr8 (55 HSPs)
chr8 (73-304)||(10079986-10080218)
chr8 (86-303)||(32043560-32043780)
chr8 (231-304)||(13171889-13171962)
chr8 (86-182)||(38178352-38178448)
chr8 (245-304)||(5908611-5908670)
chr8 (98-303)||(25985491-25985696)
chr8 (88-170)||(79133-79215)
chr8 (231-304)||(44681279-44681352)
chr8 (86-146)||(4011213-4011273)
chr8 (231-303)||(9695601-9695673)
chr8 (69-304)||(16917153-16917390)
chr8 (86-146)||(35643698-35643758)
chr8 (232-304)||(44373745-44373817)
chr8 (87-281)||(29700268-29700465)
chr8 (101-182)||(3079711-3079791)
chr8 (244-304)||(35601990-35602048)
chr8 (86-182)||(7531736-7531832)
chr8 (86-146)||(23023355-23023415)
chr8 (86-178)||(24399881-24399973)
chr8 (86-166)||(45512587-45512667)
chr8 (86-229)||(29520697-29520839)
chr8 (231-282)||(42493546-42493597)
chr8 (86-216)||(16351438-16351568)
chr8 (86-176)||(30783134-30783224)
chr8 (108-182)||(37826385-37826459)
chr8 (86-136)||(39967591-39967641)
chr8 (231-304)||(36565481-36565554)
chr8 (87-176)||(38391986-38392075)
chr8 (76-153)||(43733330-43733407)
chr8 (236-304)||(11733716-11733784)
chr8 (245-297)||(30113451-30113503)
chr8 (86-182)||(30198358-30198454)
chr8 (232-304)||(36395191-36395263)
chr8 (86-182)||(39953356-39953452)
chr8 (245-304)||(11523978-11524037)
chr8 (86-153)||(28169515-28169582)
chr8 (228-303)||(30456449-30456524)
chr8 (231-285)||(12611523-12611577)
chr8 (252-302)||(16351361-16351411)
chr8 (104-146)||(35914711-35914753)
chr8 (86-151)||(39388907-39388973)
chr8 (235-277)||(41444570-41444612)
chr8 (247-302)||(45512751-45512808)
chr8 (235-304)||(2518636-2518704)
chr8 (231-304)||(2796526-2796599)
chr8 (231-304)||(7046303-7046376)
chr8 (85-142)||(10108947-10109004)
chr8 (231-303)||(16705732-16705802)
chr8 (231-301)||(18474200-18474266)
chr8 (73-170)||(23492141-23492237)
chr8 (246-303)||(39051112-39051169)
chr8 (73-145)||(5908777-5908849)
chr8 (73-153)||(13589602-13589682)
chr8 (245-285)||(33666753-33666793)
chr8 (105-153)||(45419358-45419406)
[»] chr2 (50 HSPs)
chr2 (69-307)||(37481692-37481933)
chr2 (69-182)||(26784415-26784528)
chr2 (90-304)||(38434920-38435138)
chr2 (69-182)||(19235059-19235172)
chr2 (86-285)||(43832087-43832288)
chr2 (71-271)||(23714341-23714541)
chr2 (71-271)||(24102013-24102213)
chr2 (10-146)||(7431905-7432041)
chr2 (86-264)||(44437813-44437994)
chr2 (231-299)||(11412695-11412763)
chr2 (86-320)||(9556461-9556697)
chr2 (95-182)||(33504317-33504404)
chr2 (69-278)||(12141539-12141751)
chr2 (73-182)||(12026084-12026193)
chr2 (86-215)||(42543296-42543425)
chr2 (231-304)||(43752187-43752260)
chr2 (86-146)||(33287551-33287611)
chr2 (73-128)||(1626343-1626398)
chr2 (86-165)||(19024289-19024368)
chr2 (86-154)||(26670890-26670958)
chr2 (86-182)||(37470225-37470321)
chr2 (86-182)||(38860272-38860368)
chr2 (88-167)||(18188861-18188940)
chr2 (231-281)||(11017306-11017356)
chr2 (86-310)||(42092482-42092707)
chr2 (231-313)||(7825318-7825402)
chr2 (231-304)||(13240985-13241058)
chr2 (69-170)||(29548712-29548813)
chr2 (236-304)||(40759068-40759137)
chr2 (235-283)||(7615287-7615335)
chr2 (231-303)||(19024150-19024222)
chr2 (86-181)||(4598654-4598749)
chr2 (245-304)||(8180749-8180808)
chr2 (86-141)||(12489894-12489949)
chr2 (245-304)||(36183420-36183479)
chr2 (246-304)||(786799-786857)
chr2 (86-192)||(5759087-5759193)
chr2 (231-277)||(18958903-18958949)
chr2 (231-281)||(41330121-41330171)
chr2 (113-170)||(4481594-4481651)
chr2 (236-285)||(4598807-4598856)
chr2 (232-265)||(14197404-14197437)
chr2 (231-304)||(38429853-38429926)
chr2 (231-304)||(41763282-41763354)
chr2 (232-281)||(44411704-44411753)
chr2 (231-283)||(19337090-19337142)
chr2 (88-176)||(19855562-19855650)
chr2 (88-128)||(23915787-23915827)
chr2 (86-146)||(37452318-37452378)
chr2 (95-127)||(42149761-42149793)
[»] chr1 (60 HSPs)
chr1 (71-304)||(43423688-43423924)
chr1 (71-285)||(3818933-3819150)
chr1 (69-297)||(38868858-38869089)
chr1 (34-182)||(6025699-6025847)
chr1 (72-176)||(42501208-42501312)
chr1 (86-288)||(26016422-26016627)
chr1 (86-303)||(40419609-40419829)
chr1 (231-310)||(9509281-9509360)
chr1 (86-303)||(32404618-32404837)
chr1 (86-171)||(12231470-12231555)
chr1 (69-182)||(30834052-30834165)
chr1 (228-304)||(51812494-51812570)
chr1 (233-297)||(1661406-1661470)
chr1 (99-303)||(16943145-16943351)
chr1 (69-200)||(33560933-33561064)
chr1 (69-162)||(8342956-8343049)
chr1 (235-304)||(35828794-35828863)
chr1 (86-285)||(40416359-40416561)
chr1 (231-310)||(9599634-9599713)
chr1 (86-169)||(44008686-44008769)
chr1 (86-176)||(853877-853967)
chr1 (86-143)||(8203226-8203283)
chr1 (231-303)||(17815444-17815514)
chr1 (86-143)||(19969304-19969361)
chr1 (246-302)||(19908294-19908350)
chr1 (86-214)||(28528417-28528545)
chr1 (71-159)||(29577219-29577307)
chr1 (69-176)||(17815579-17815686)
chr1 (95-264)||(48431507-48431679)
chr1 (231-304)||(696238-696311)
chr1 (231-304)||(1210714-1210787)
chr1 (244-285)||(2544587-2544628)
chr1 (231-304)||(4001695-4001768)
chr1 (231-304)||(15085903-15085976)
chr1 (231-304)||(32082985-32083058)
chr1 (86-127)||(39422019-39422060)
chr1 (231-304)||(51441005-51441078)
chr1 (108-165)||(51584855-51584912)
chr1 (86-154)||(7083012-7083080)
chr1 (86-174)||(11941672-11941760)
chr1 (231-303)||(39422282-39422353)
chr1 (245-304)||(8391741-8391800)
chr1 (86-153)||(52561681-52561748)
chr1 (247-310)||(52561867-52561930)
chr1 (231-281)||(8343098-8343148)
chr1 (89-175)||(8796310-8796396)
chr1 (250-304)||(9592703-9592757)
chr1 (107-165)||(12261826-12261884)
chr1 (74-140)||(43367710-43367776)
chr1 (235-305)||(50636076-50636146)
chr1 (228-265)||(7921843-7921880)
chr1 (86-147)||(8676957-8677018)
chr1 (95-252)||(10569172-10569328)
chr1 (231-288)||(17267936-17267993)
chr1 (244-304)||(27703978-27704039)
chr1 (231-304)||(30202370-30202443)
chr1 (251-304)||(32231214-32231267)
chr1 (231-288)||(34792589-34792646)
chr1 (235-283)||(13827961-13828009)
chr1 (244-304)||(43375832-43375891)
[»] chr4 (88 HSPs)
chr4 (69-310)||(54470170-54470414)
chr4 (69-287)||(42639095-42639316)
chr4 (86-229)||(31961358-31961501)
chr4 (71-304)||(33709893-33710129)
chr4 (86-303)||(31897520-31897738)
chr4 (69-182)||(7681985-7682098)
chr4 (86-182)||(40018281-40018377)
chr4 (231-303)||(44047588-44047660)
chr4 (236-303)||(10775667-10775734)
chr4 (86-303)||(17900450-17900670)
chr4 (236-303)||(44360053-44360124)
chr4 (86-303)||(46371994-46372214)
chr4 (86-175)||(26356720-26356809)
chr4 (231-304)||(37797821-37797894)
chr4 (86-304)||(50680708-50680930)
chr4 (71-146)||(37488221-37488296)
chr4 (85-257)||(38903809-38903986)
chr4 (86-176)||(47147473-47147563)
chr4 (88-166)||(49987518-49987596)
chr4 (231-304)||(51252701-51252772)
chr4 (231-304)||(49987397-49987470)
chr4 (89-174)||(53517632-53517717)
chr4 (228-304)||(29398787-29398863)
chr4 (231-303)||(36557269-36557341)
chr4 (97-153)||(45204942-45204998)
chr4 (236-303)||(6478913-6478980)
chr4 (73-128)||(6843763-6843818)
chr4 (86-141)||(10209171-10209226)
chr4 (95-182)||(25967362-25967449)
chr4 (235-302)||(43562658-43562725)
chr4 (100-167)||(44719470-44719537)
chr4 (124-222)||(11389778-11389876)
chr4 (72-146)||(20999130-20999204)
chr4 (231-285)||(41192824-41192878)
chr4 (69-167)||(42293340-42293438)
chr4 (86-160)||(45569101-45569175)
chr4 (69-170)||(47372757-47372858)
chr4 (231-305)||(48174333-48174407)
chr4 (86-167)||(934523-934603)
chr4 (71-216)||(2589132-2589277)
chr4 (231-304)||(12494719-12494792)
chr4 (86-182)||(21879245-21879341)
chr4 (81-170)||(30853449-30853538)
chr4 (231-304)||(31960054-31960127)
chr4 (231-304)||(38570987-38571060)
chr4 (86-170)||(42285795-42285877)
chr4 (69-146)||(43562817-43562894)
chr4 (107-180)||(51009224-51009297)
chr4 (231-304)||(52569755-52569828)
chr4 (85-125)||(7544614-7544654)
chr4 (86-182)||(28351653-28351749)
chr4 (117-288)||(31339522-31339694)
chr4 (231-304)||(31403257-31403333)
chr4 (85-153)||(35690394-35690462)
chr4 (86-142)||(44384965-44385020)
chr4 (94-178)||(44860931-44861015)
chr4 (86-170)||(50967120-50967203)
chr4 (96-160)||(51252555-51252619)
chr4 (260-303)||(934704-934747)
chr4 (100-143)||(8599047-8599090)
chr4 (95-178)||(18966703-18966786)
chr4 (235-290)||(30621448-30621503)
chr4 (69-160)||(31403109-31403200)
chr4 (245-304)||(33191102-33191161)
chr4 (69-128)||(37042739-37042798)
chr4 (231-297)||(436205-436271)
chr4 (69-167)||(8459110-8459208)
chr4 (86-128)||(26024942-26024984)
chr4 (231-285)||(31459018-31459072)
chr4 (231-297)||(33227185-33227251)
chr4 (231-285)||(35555887-35555941)
chr4 (237-304)||(43070014-43070077)
chr4 (71-165)||(53540401-53540495)
chr4 (231-297)||(53707770-53707836)
chr4 (86-152)||(55809082-55809148)
chr4 (102-174)||(4136839-4136909)
chr4 (103-196)||(13805374-13805467)
chr4 (251-304)||(20998981-20999034)
chr4 (69-125)||(41192211-41192268)
chr4 (69-114)||(44047446-44047491)
chr4 (129-303)||(25257716-25257891)
chr4 (86-122)||(26025011-26025047)
chr4 (231-283)||(28236173-28236225)
chr4 (94-146)||(40268363-40268414)
chr4 (102-182)||(42566333-42566413)
chr4 (231-283)||(50662377-50662429)
chr4 (97-153)||(51421853-51421909)
chr4 (118-182)||(55028910-55028974)
[»] chr5 (46 HSPs)
chr5 (103-310)||(6859344-6859554)
chr5 (71-304)||(14749276-14749512)
chr5 (86-303)||(7359352-7359571)
chr5 (69-182)||(12576935-12577048)
chr5 (86-305)||(6888961-6889183)
chr5 (86-303)||(2712918-2713134)
chr5 (73-176)||(18698894-18698997)
chr5 (86-304)||(42199257-42199476)
chr5 (86-303)||(10082837-10083051)
chr5 (70-304)||(38684449-38684686)
chr5 (104-301)||(15489602-15489802)
chr5 (86-283)||(31636012-31636212)
chr5 (86-164)||(33667547-33667625)
chr5 (86-182)||(11002513-11002609)
chr5 (86-146)||(27998571-27998631)
chr5 (231-303)||(14667727-14667805)
chr5 (86-145)||(30588578-30588637)
chr5 (86-176)||(7678578-7678668)
chr5 (86-136)||(14667911-14667961)
chr5 (69-167)||(42199502-42199600)
chr5 (90-182)||(21952451-21952541)
chr5 (86-167)||(36123274-36123355)
chr5 (231-304)||(38684936-38685009)
chr5 (97-153)||(28005-28061)
chr5 (86-182)||(1525738-1525834)
chr5 (231-303)||(15588780-15588852)
chr5 (95-151)||(29922409-29922465)
chr5 (231-302)||(32516529-32516598)
chr5 (245-304)||(2075728-2075787)
chr5 (86-141)||(15369889-15369944)
chr5 (251-302)||(15986985-15987036)
chr5 (231-266)||(43475247-43475282)
chr5 (231-297)||(219693-219759)
chr5 (246-303)||(418242-418297)
chr5 (85-123)||(1174642-1174680)
chr5 (89-167)||(3775162-3775240)
chr5 (86-176)||(9917542-9917632)
chr5 (231-297)||(24178486-24178552)
chr5 (244-285)||(79501-79542)
chr5 (231-304)||(1275234-1275306)
chr5 (231-304)||(4496353-4496426)
chr5 (252-285)||(5305714-5305747)
chr5 (228-281)||(12577085-12577137)
chr5 (231-280)||(33667209-33667258)
chr5 (86-139)||(43475377-43475429)
chr5 (88-159)||(9235166-9235235)
[»] chr3 (46 HSPs)
chr3 (86-304)||(39600773-39600994)
chr3 (231-303)||(3987017-3987089)
chr3 (69-260)||(21200561-21200755)
chr3 (87-170)||(2340810-2340893)
chr3 (86-165)||(11581555-11581634)
chr3 (231-305)||(50249352-50249426)
chr3 (86-285)||(45289183-45289387)
chr3 (86-136)||(36820069-36820119)
chr3 (231-297)||(49503794-49503860)
chr3 (103-168)||(31261051-31261116)
chr3 (73-142)||(41452819-41452888)
chr3 (231-304)||(47233836-47233909)
chr3 (86-166)||(20262423-20262503)
chr3 (86-170)||(26990319-26990403)
chr3 (89-303)||(31454320-31454537)
chr3 (231-298)||(31337766-31337832)
chr3 (88-262)||(37351418-37351595)
chr3 (86-159)||(29475805-29475876)
chr3 (231-304)||(36820201-36820272)
chr3 (86-136)||(46431771-46431821)
chr3 (231-297)||(54128354-54128420)
chr3 (69-170)||(55244383-55244485)
chr3 (247-304)||(344967-345024)
chr3 (98-167)||(40982005-40982074)
chr3 (231-304)||(52138769-52138842)
chr3 (86-146)||(19162679-19162739)
chr3 (231-279)||(26490309-26490357)
chr3 (245-305)||(29600867-29600927)
chr3 (86-174)||(40116560-40116648)
chr3 (231-303)||(54278990-54279062)
chr3 (245-304)||(28245406-28245465)
chr3 (89-176)||(43254991-43255078)
chr3 (107-182)||(46146190-46146265)
chr3 (246-304)||(54365231-54365287)
chr3 (86-152)||(27893213-27893279)
chr3 (69-127)||(33700332-33700390)
chr3 (230-288)||(35033131-35033189)
chr3 (231-281)||(38430840-38430890)
chr3 (71-116)||(36304126-36304171)
chr3 (231-280)||(50960873-50960922)
chr3 (231-304)||(51447950-51448022)
chr3 (69-158)||(11284111-11284195)
chr3 (239-287)||(41842759-41842806)
chr3 (86-182)||(42510108-42510204)
chr3 (86-142)||(43308696-43308752)
chr3 (245-285)||(54485526-54485566)
[»] chr6 (23 HSPs)
chr6 (231-303)||(12134141-12134213)
chr6 (236-304)||(6641654-6641722)
chr6 (231-303)||(33084028-33084100)
chr6 (231-301)||(2079313-2079382)
chr6 (86-170)||(10617326-10617410)
chr6 (70-176)||(33997620-33997726)
chr6 (86-159)||(34597-34670)
chr6 (73-182)||(35199701-35199810)
chr6 (73-176)||(1747720-1747823)
chr6 (86-136)||(38903-38953)
chr6 (231-304)||(9706745-9706818)
chr6 (239-299)||(14389415-14389473)
chr6 (231-304)||(20427876-20427949)
chr6 (86-146)||(1681613-1681673)
chr6 (89-165)||(7080451-7080527)
chr6 (86-182)||(31831951-31832047)
chr6 (95-166)||(4948405-4948476)
chr6 (95-166)||(4955376-4955447)
chr6 (98-303)||(6906932-6907139)
chr6 (231-297)||(28085352-28085418)
chr6 (231-304)||(30031225-30031298)
chr6 (88-176)||(32913355-32913444)
chr6 (98-182)||(8364650-8364734)
[»] scaffold0018 (3 HSPs)
scaffold0018 (86-182)||(178512-178608)
scaffold0018 (231-304)||(31437-31510)
scaffold0018 (231-281)||(44108-44158)
[»] scaffold0373 (1 HSPs)
scaffold0373 (73-128)||(2380-2435)
[»] scaffold0325 (1 HSPs)
scaffold0325 (87-170)||(11903-11986)
[»] scaffold0157 (1 HSPs)
scaffold0157 (231-304)||(25685-25758)
[»] scaffold0015 (1 HSPs)
scaffold0015 (86-159)||(66654-66727)
[»] scaffold0024 (1 HSPs)
scaffold0024 (245-297)||(82697-82749)
[»] scaffold0021 (1 HSPs)
scaffold0021 (231-303)||(101015-101082)


Alignment Details
Target: chr7 (Bit Score: 244; Significance: 1e-135; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 69 - 316
Target Start/End: Original strand, 42177093 - 42177340
Alignment:
Q  69 ataccatatttttatgaaactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacc 168  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  42177093 ataccatatttttatgaaactcatttatctctagatctttcttaatagattctcttataggttttctacgtcttcctccacctctaatgatttgactacc 42177192  T
Q  169 cttcatcttatctagtcgccatgctacagaatgcacaagttttctctccacgtgctcaaacataagcctagttttcaccatcttttctactataggtgat 268  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42177193 cttcatcttatctagtcgccatgctacagaatgcacaagttttctctccacgtgctcaaacataagcctagttttcaccatcttttctactataggtgat 42177292  T
Q  269 acctcaactctctctctaatattgtcatttctaatcaaatccagtata 316  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  42177293 acctcaactctctctctaatattgtcatttctaatcaaatccagtata 42177340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 89 - 303
Target Start/End: Original strand, 36514303 - 36514517
Alignment:
Q  89 tcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacccttcatcttatctagtcgcc 188  Q
    ||||||||||||||||| ||||| |||| |||||||||   |||||||||||| || | ||||||| ||| |||||| ||||  |||| ||||| || ||    
T  36514303 tcatttatctctagatccttcttgatagcttctcttatgttttttctatgtctccc-ctacctctagtgacttgactcccctctatctgatctactctcc 36514401  T
Q  189 atgctacagaatgcacaagttttctctccacgtgctcaaaca---taagcctagttttcaccatcttttctactataggtgatacctcaactctctctct 285  Q
    || ||||||||| |||||||  |||||| || ||| |||||    |||| |||||||  |||||||||||||||||||||| |||| |||  ||||||||    
T  36514402 atactacagaatccacaagtcgtctctctacatgcccaaaccacctaagtctagtttctaccatcttttctactataggtgctaccccaa--ctctctct 36514499  T
Q  286 aatattgtcatttctaat 303  Q
    ||| ||||| ||||||||    
T  36514500 aatgttgtcctttctaat 36514517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 86 - 304
Target Start/End: Original strand, 28628025 - 28628246
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacccttcatcttatctagtc 185  Q
    |||||||| ||||||| ||||||| |||||| ||||||||||| ||||||| ||||||||| ||||||  ||||||||||| ||| ||||  ||||| ||    
T  28628025 aactcattaatctctaaatctttcctaatagtttctcttatagtttttctaggtcttcctctacctcttgtgatttgactatcctccatcggatctactc 28628124  T
Q  186 gccatgctacagaatgcacaagttttctctccacgtgctcaa---acataagcctagttttcaccatcttttctactataggtgatacctcaactctctc 282  Q
     || | ||||| |||  ||| |||||||||  || ||| |||   || |||||| | ||| ||||||| |||||||| |||||| |||  |||||| |||    
T  28628125 tccttactacataatctacaggttttctctttacatgcccaaaccacctaagccaattttccaccatcatttctactctaggtgctactccaactccctc 28628224  T
Q  283 tctaatattgtcatttctaatc 304  Q
    |||||| |||| ||||||||||    
T  28628225 tctaatgttgtaatttctaatc 28628246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 109 - 305
Target Start/End: Complemental strand, 43282576 - 43282373
Alignment:
Q  109 cttaatagattctcttataggttttctatgtcttcctc--cacctctaatgatttgactacccttcatcttatctagtcgccatgctacagaatgcacaa 206  Q
    |||||||| ||||||||||| ||||||| ||| |||||  |||||||  |||| |||||| ||| ||||| ||||| || || | |||||||||   |||    
T  43282576 cttaatagtttctcttatagtttttctaggtcatcctctacacctcttgtgatctgactatcctccatct-atctactctccttcctacagaatctgcaa 43282478  T
Q  207 gttttctctccacgtgctcaa---acataagcctagttttcaccatcttttctactataggtgatacctcaactctctctct---aatattgtcatttct 300  Q
    || ||||||| || ||| |||   || |||||||||||| ||||  ||||||||||||||||| |||| |||||||||||||   ||| |||||||||||    
T  43282477 gtcttctctctacatgcccaattcacctaagcctagtttccaccgacttttctactataggtgctaccccaactctctctctctaaatgttgtcatttct 43282378  T
Q  301 aatca 305  Q
    |||||    
T  43282377 aatca 43282373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 112 - 288
Target Start/End: Complemental strand, 47848838 - 47848659
Alignment:
Q  112 aatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacccttcatcttatctagtcgccatgctacagaatgcacaagtttt 211  Q
    ||||| ||||||||||| |||||||  ||||||||  |||||| ||||  ||||| ||| ||||| ||||| || || |  ||||||||  |||||| ||    
T  47848838 aatagtttctcttatagtttttctagttcttcctctgcctctagtgatcagactatcctccatctgatctactctccttagtacagaatttacaagtctt 47848739  T
Q  212 ctctccacgtgctcaaaca---taagcctagttttcaccatcttttctactataggtgatacctcaactctctctctaat 288  Q
    ||||| || ||| |||||    |||||||| ||| ||||||||||||||||||||| | |||| ||||||||||||||||    
T  47848738 ctctcgacatgcccaaaccacctaagcctattttccaccatcttttctactataggcgctaccccaactctctctctaat 47848659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 69 - 146
Target Start/End: Original strand, 30200039 - 30200116
Alignment:
Q  69 ataccatatttttatgaaactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctc 146  Q
    ||||||||||| ||| ||||||||| ||||||||||||||||||| ||||| | |||||| |||| ||||||||||||    
T  30200039 ataccatatttatatcaaactcattaatctctagatctttcttaaaagatttttttatagtttttttatgtcttcctc 30200116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 73 - 154
Target Start/End: Complemental strand, 45601679 - 45601598
Alignment:
Q  73 catatttttatgaaactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctcta 154  Q
    |||||||| ||  |||||||| |||||||||||||||||||| | ||||||||||| ||||||| ||||||||| |||||||    
T  45601679 catattttgatccaactcattaatctctagatctttcttaatggtttctcttatagtttttctaggtcttcctctacctcta 45601598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 231 - 285
Target Start/End: Original strand, 27021932 - 27021986
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaactctctctct 285  Q
    |||||||||||||||||| ||||||||||||||||| |||| |||||||||||||    
T  27021932 taagcctagttttcaccaacttttctactataggtgctaccccaactctctctct 27021986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 231 - 304
Target Start/End: Original strand, 27893788 - 27893859
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaatc 304  Q
    |||||||| ||| |||||||| |||||||||||||| ||||||||  ||||||||||||||||| |||||||||    
T  27893788 taagcctattttccaccatctattctactataggtgttacctcaa--ctctctctaatattgtcgtttctaatc 27893859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 69 - 175
Target Start/End: Original strand, 32368412 - 32368518
Alignment:
Q  69 ataccatatttttatgaaactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacc 168  Q
    |||||||||||  ||  |||||| | ||||||| ||||| |||||||| ||||||||||| |||||||  |||||||   |||||| |||||||||||||    
T  32368412 ataccatatttcgatccaactcactaatctctaaatcttccttaatagcttctcttatagattttctagatcttcctttgcctctagtgatttgactacc 32368511  T
Q  169 cttcatc 175  Q
    |||||||    
T  32368512 cttcatc 32368518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 231 - 304
Target Start/End: Complemental strand, 39811999 - 39811926
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaatc 304  Q
    |||||| |||||||||||| |||||||  ||||||| | || |||||||||||||||| |||||||||||||||    
T  39811999 taagccgagttttcaccattttttctatgataggtgctgccccaactctctctctaatgttgtcatttctaatc 39811926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 86 - 182
Target Start/End: Original strand, 38135305 - 38135401
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacccttcatcttatcta 182  Q
    |||||||| ||||||| |||||| ||||||| ||||||||||  ||||||| |||||| ||  ||||||||||| |||||| ||| ||||| |||||    
T  38135305 aactcattaatctctaaatcttttttaatagtttctcttatactttttctaggtcttcatctgcctctaatgatctgactatcctccatctgatcta 38135401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 69 - 176
Target Start/End: Original strand, 24549763 - 24549870
Alignment:
Q  69 ataccatatttttatgaaactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacc 168  Q
    |||||||||||  ||  |||||||| |||||||||||||||||||||| ||||||||||| | ||  | |||||| || ||||||| |||||||| | ||    
T  24549763 ataccatatttcaatccaactcattaatctctagatctttcttaatagtttctcttatagttctttcaggtcttcttctacctctagtgatttgaatccc 24549862  T
Q  169 cttcatct 176  Q
    || |||||    
T  24549863 ctccatct 24549870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 95 - 166
Target Start/End: Original strand, 30814772 - 30814843
Alignment:
Q  95 atctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgacta 166  Q
    |||||||||||||||||||||| |||||||||||  |||||| |||||||||  |||||| |||| ||||||    
T  30814772 atctctagatctttcttaatagtttctcttatagtgtttctaggtcttcctctgcctctagtgatctgacta 30814843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 231 - 310
Target Start/End: Original strand, 37439581 - 37439660
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaatcaaatcc 310  Q
    |||||||| ||| || |||||||||||| ||||||| |||  |||||||||||||||| ||||||||||| |||| ||||    
T  37439581 taagcctattttacatcatcttttctaccataggtgctactccaactctctctctaatgttgtcatttcttatcatatcc 37439660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 64 - 166
Target Start/End: Original strand, 29653616 - 29653718
Alignment:
Q  64 atgagataccatatttttatgaaactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttga 163  Q
    |||| ||| ||||||| |||  |||||||| |||||||||||||||||||||| |||||||| || ||||||  |||||| ||   |||||| |||||||    
T  29653616 atgatatatcatatttctatctaactcattaatctctagatctttcttaatagtttctcttacagtttttcttggtcttcttctgtctctaacgatttga 29653715  T
Q  164 cta 166  Q
    |||    
T  29653716 cta 29653718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 231 - 310
Target Start/End: Original strand, 30200203 - 30200278
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaatcaaatcc 310  Q
    |||||||||||| ||||||||||||||||||||||| ||||    ||  ||||||||| |||||||||||||||| ||||    
T  30200203 taagcctagtttccaccatcttttctactataggtgttacc----ctaactctctaatgttgtcatttctaatcatatcc 30200278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 71 - 136
Target Start/End: Complemental strand, 1569221 - 1569156
Alignment:
Q  71 accatatttttatgaaactcatttatctctagatctttcttaatagattctcttataggttttcta 136  Q
    |||||||||| ||  |||||||| |||||||||||||||||||||| | ||||||||| |||||||    
T  1569221 accatattttgatccaactcattaatctctagatctttcttaatagttactcttatagtttttcta 1569156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 69 - 146
Target Start/End: Complemental strand, 12966223 - 12966146
Alignment:
Q  69 ataccatatttttatgaaactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctc 146  Q
    ||||||||||| |||  || ||||| ||||||| || ||||||||||| ||||||||||| ||||||| |||||||||    
T  12966223 ataccatatttctatccaaatcattaatctctaaatatttcttaatagtttctcttatagtttttctaggtcttcctc 12966146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 231 - 304
Target Start/End: Original strand, 35906441 - 35906514
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaatc 304  Q
    |||||||| |||  |||| ||||||||||||||||| |||||| ||||||||||||||  ||||||| ||||||    
T  35906441 taagcctattttctaccaacttttctactataggtgctacctccactctctctctaatggtgtcattcctaatc 35906514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 245 - 302
Target Start/End: Complemental strand, 36136792 - 36136735
Alignment:
Q  245 accatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaa 302  Q
    |||||||||||||||||||||| |||| ||||||||||||||||  ||||||| ||||    
T  36136792 accatcttttctactataggtgctaccccaactctctctctaatggtgtcattcctaa 36136735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 86 - 167
Target Start/End: Complemental strand, 40830392 - 40830311
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactac 167  Q
    |||||||| || |||||||| |||||||||| ||||||||||| ||||||| |||||||||   ||||| |||||| |||||    
T  40830392 aactcattaatttctagatccttcttaatagtttctcttatagattttctaggtcttcctctgtctctagtgatttcactac 40830311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 231 - 304
Target Start/End: Complemental strand, 41948558 - 41948485
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaatc 304  Q
    |||||||||||| |||||||||||||| | || ||| |||  |||||||| ||||||| |||||||||||||||    
T  41948558 taagcctagtttccaccatcttttctattgtaagtgctacgccaactctcactctaatgttgtcatttctaatc 41948485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 86 - 159
Target Start/End: Original strand, 44401217 - 44401290
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgat 159  Q
    ||||| || ||||||| |||||||||||||| ||||||||||  ||||||| ||| ||||||||||||| ||||    
T  44401217 aactcgttaatctctaaatctttcttaatagtttctcttataatttttctaggtcatcctccacctctagtgat 44401290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 231 - 302
Target Start/End: Original strand, 19262673 - 19262742
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaa 302  Q
    |||||| |||||  |||||||||||||| ||||||| |||| |||  |||||||||||||||||||||||||    
T  19262673 taagccaagtttctaccatcttttctacaataggtgctaccccaa--ctctctctaatattgtcatttctaa 19262742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 231 - 278
Target Start/End: Complemental strand, 38920836 - 38920789
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaactc 278  Q
    |||||||||||| ||||||||||||||||||||||| |||| ||||||    
T  38920836 taagcctagtttccaccatcttttctactataggtgctaccccaactc 38920789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 302
Target Start/End: Original strand, 45841225 - 45841291
Alignment:
Q  235 cctagttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaa 302  Q
    |||||||| |||| ||||||||| |||||||| ||| |||||||||| |||||| |||||||||||||    
T  45841225 cctagtttccaccgtcttttctattataggtgttac-tcaactctctatctaatgttgtcatttctaa 45841291  T

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Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 107 - 165
Target Start/End: Complemental strand, 14593929 - 14593871
Alignment:
Q  107 ttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgact 165  Q
    |||||||||| ||||||||||| ||||||| ||||||| | ||||||| ||||||||||    
T  14593929 ttcttaatagtttctcttatagtttttctaggtcttcccctacctctagtgatttgact 14593871  T

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Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 159
Target Start/End: Complemental strand, 22174207 - 22174117
Alignment:
Q  69 ataccatatttttatgaaactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgat 159  Q
    ||||||||||| |||  || ||||| |||||||||||||| || |||| ||||||||||| ||||||| || ||||||  |||||| ||||    
T  22174207 ataccatatttctatctaattcattaatctctagatctttgtttatagtttctcttatagtttttctacgttttcctctgcctctagtgat 22174117  T

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Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 231 - 305
Target Start/End: Complemental strand, 28021006 - 28020932
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaatca 305  Q
    |||||| ||||| ||||||||||||||| ||| ||| |||| ||||||| |||||||| || ||||||| |||||    
T  28021006 taagccaagtttccaccatcttttctacgataagtgctaccccaactctttctctaatgttatcatttcgaatca 28020932  T

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Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 231 - 304
Target Start/End: Complemental strand, 37617987 - 37617913
Alignment:
Q  231 taagcctagttttc-accatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaatc 304  Q
    |||||||| ||||| |||| ||||||||||||||||| |||| | ||||||||||||||  ||||||| ||||||    
T  37617987 taagcctatttttctaccaacttttctactataggtgctacccccactctctctctaatggtgtcattcctaatc 37617913  T

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Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 231 - 304
Target Start/End: Complemental strand, 6374910 - 6374837
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaatc 304  Q
    |||||||| |||  |||| ||||||||||||||||| |||| | ||||||||||||||  ||||||| ||||||    
T  6374910 taagcctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtcattcctaatc 6374837  T

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Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 231 - 288
Target Start/End: Original strand, 12841515 - 12841572
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaactctctctctaat 288  Q
    |||||||| |||  |||| ||||||||||||||||| |||||| ||||||||||||||    
T  12841515 taagcctattttctaccaacttttctactataggtgctacctccactctctctctaat 12841572  T

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Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 231 - 304
Target Start/End: Original strand, 13859248 - 13859321
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaatc 304  Q
    |||||||| |||  |||| ||||||||||||||||| |||| | ||||||||||||||  ||||||| ||||||    
T  13859248 taagcctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtcattcctaatc 13859321  T

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Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 231 - 304
Target Start/End: Complemental strand, 34869462 - 34869389
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaatc 304  Q
    |||||||| |||  |||| ||||||||||||||||| |||| | ||||||||||||||  ||||||| ||||||    
T  34869462 taagcctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtcattcctaatc 34869389  T

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Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 231 - 304
Target Start/End: Original strand, 45836720 - 45836793
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaatc 304  Q
    |||||||| |||  |||| ||||||||||||||||| |||| | ||||||||||||||  ||||||| ||||||    
T  45836720 taagcctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtcattcctaatc 45836793  T

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Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 231 - 304
Target Start/End: Original strand, 46014420 - 46014493
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaatc 304  Q
    |||||||| |||  |||| |||||||||||||||||  ||| | ||||||||||||||  ||||||||||||||    
T  46014420 taagcctattttctaccaacttttctactataggtgcaacccccactctctctctaatggtgtcatttctaatc 46014493  T

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Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 246 - 303
Target Start/End: Original strand, 48736154 - 48736211
Alignment:
Q  246 ccatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaat 303  Q
    |||||||||||||| |||||| |||| ||||||||||| |||| | ||||||||||||    
T  48736154 ccatcttttctactgtaggtgctaccccaactctctctataatgtcgtcatttctaat 48736211  T

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Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 231 - 304
Target Start/End: Complemental strand, 49029318 - 49029245
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaatc 304  Q
    |||||||| |||  |||| ||||||||||||||||| |||| | ||||||||||||||  ||||||| ||||||    
T  49029318 taagcctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtcattcctaatc 49029245  T

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Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 165
Target Start/End: Original strand, 19119515 - 19119594
Alignment:
Q  85 aaactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgact 165  Q
    ||||||||| |||||||||||  |||| |||| |||||| ||| |||||||| ||||||| | ||||||| ||||||||||    
T  19119515 aaactcattgatctctagatccatcttgatagtttctctaata-gttttctaggtcttccactacctctagtgatttgact 19119594  T

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Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 304
Target Start/End: Original strand, 26742140 - 26742210
Alignment:
Q  235 cctagttttcaccatcttttctactataggtgatacctcaactct--ctctctaatattgtcatttctaatc 304  Q
    |||| ||| ||||||||||||||||||||||| |||| |||||||  |||||| ||||| ||||||||||||    
T  26742140 cctattttccaccatcttttctactataggtgctacc-caactctcactctctgatattatcatttctaatc 26742210  T

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Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 142
Target Start/End: Complemental strand, 28858235 - 28858179
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttataggttttctatgtctt 142  Q
    |||| ||| |||||||||||||||||||||| || |||||||| ||||||| |||||    
T  28858235 aacttattaatctctagatctttcttaatagtttgtcttatagtttttctaagtctt 28858179  T

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Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 125
Target Start/End: Original strand, 40139027 - 40139079
Alignment:
Q  73 catatttttatgaaactcatttatctctagatctttcttaatagattctctta 125  Q
    ||||||| ||| |||| |||| |||||||||||||||||||||| ||||||||    
T  40139027 catatttctatcaaacgcattaatctctagatctttcttaatagtttctctta 40139079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 231 - 303
Target Start/End: Complemental strand, 42187512 - 42187440
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaat 303  Q
    |||||||| ||| |||||||||||||| |||||||| |||| | ||||||| ||||||  || ||||||||||    
T  42187512 taagcctattttccaccatcttttctattataggtgctaccccgactctctttctaatgctgccatttctaat 42187440  T

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Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 86 - 176
Target Start/End: Complemental strand, 41461289 - 41461196
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctcc---acctctaatgatttgactacccttcatct 176  Q
    |||||||| ||| |||||||||| ||||||| ||||||||||| |||| |  ||| ||||||    |||||| |||||||||||| ||||||||    
T  41461289 aactcattaatcactagatctttattaatagtttctcttatagtttttttgggtcgtcctcctctgcctctagtgatttgactactcttcatct 41461196  T

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Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 260 - 303
Target Start/End: Original strand, 48202959 - 48203002
Alignment:
Q  260 ataggtgatacctcaactctctctctaatattgtcatttctaat 303  Q
    ||||||| |||| |||||||||||||||| ||||||||||||||    
T  48202959 ataggtgttaccccaactctctctctaatgttgtcatttctaat 48203002  T

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Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 107 - 165
Target Start/End: Complemental strand, 16013452 - 16013394
Alignment:
Q  107 ttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgact 165  Q
    |||||||||| ||||||||||| ||||||| ||||||| | ||||||  ||||||||||    
T  16013452 ttcttaatagtttctcttatagtttttctaggtcttcccctacctctggtgatttgact 16013394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 128
Target Start/End: Complemental strand, 30664758 - 30664716
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttatag 128  Q
    |||||||| |||||||||||||||||||||| |||| ||||||    
T  30664758 aactcattaatctctagatctttcttaatagtttcttttatag 30664716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 304
Target Start/End: Original strand, 47796390 - 47796451
Alignment:
Q  245 accatcttttctactataggtgatacctcaactctctct--ctaatattgtcatttctaatc 304  Q
    |||| |||||||||||||| || |||  |||||||||||  |||||||||||||||||||||    
T  47796390 accaccttttctactatagttggtactccaactctctctatctaatattgtcatttctaatc 47796451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 304
Target Start/End: Original strand, 36102005 - 36102078
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaatc 304  Q
    |||||||| ||| || ||||||||||| |||||||| |||||  |||||  ||| ||| |||||||||||||||    
T  36102005 taagcctattttccaacatcttttctattataggtgctaccttcactcttcctcaaatgttgtcatttctaatc 36102078  T

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Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 304
Target Start/End: Original strand, 39906610 - 39906683
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaatc 304  Q
    |||||||| |||  |||| ||||||||||||||||| ||||   ||||||||||||||  ||||||| ||||||    
T  39906610 taagcctattttctaccaacttttctactataggtgctaccctcactctctctctaatggtgtcattcctaatc 39906683  T

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Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 245 - 285
Target Start/End: Complemental strand, 1523852 - 1523812
Alignment:
Q  245 accatcttttctactataggtgatacctcaactctctctct 285  Q
    |||||||||| ||| ||||||| ||||||||||||||||||    
T  1523852 accatcttttttacgataggtgctacctcaactctctctct 1523812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 122
Target Start/End: Complemental strand, 30144965 - 30144929
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctc 122  Q
    |||||||| |||||||||||||||||||||| |||||    
T  30144965 aactcattaatctctagatctttcttaatagtttctc 30144929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 182
Target Start/End: Complemental strand, 37595840 - 37595764
Alignment:
Q  106 tttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacccttcatcttatcta 182  Q
    ||||||||||  ||||||||||| ||||| |  |||| ||   ||||||  ||||||||||||||||||||||||||    
T  37595840 tttcttaataatttctcttatagattttcaacttcttactttgcctctagcgatttgactacccttcatcttatcta 37595764  T

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Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 283
Target Start/End: Complemental strand, 45558446 - 45558352
Alignment:
Q  192 ctacagaatgcacaagttttctctccacgtgctcaaaca---taagcctagttttcaccatcttttctactataggtgatacctcaactctctct 283  Q
    ||||||||| |||| || ||||||| |||||| |||||    |||| | |||||  |||| ||||||||||||||||| |||| |||||||||||    
T  45558446 ctacagaatccacaggtattctctctacgtgcacaaaccacctaagtcgagtttctaccaacttttctactataggtggtaccccaactctctct 45558352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 82; Significance: 1e-38; HSPs: 55)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 73 - 304
Target Start/End: Original strand, 10079986 - 10080218
Alignment:
Q  73 catatttttatgaaactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacccttc 172  Q
    ||||||| |||  |||||||| ||||||||||||||||||| || || |||||||| || |||| ||||||||| ||||||| |||||||||| ||||||    
T  10079986 catatttctatccaactcattaatctctagatctttcttaacagtttttcttatagtttctctaggtcttcctctacctctagtgatttgactccccttc 10080085  T
Q  173 atcttatctagtcgccatgctacagaatgcacaagttttctctccacgtgctcaaa-cat-aagcctagttttcaccatcttttctactataggtgatac 270  Q
    || | ||||| || || | ||||| ||| | || || ||||||| || ||| |||| ||| | ||||||||| |||||||||||||||| ||| || |||    
T  10080086 atttgatctactctccttactacaaaatcctcaggtcttctctctacatgcccaaaccatcaggcctagtttccaccatcttttctact-tagatgctac 10080184  T
Q  271 ctcaactctctctctaatattgtcatttctaatc 304  Q
    |||||||||||||||||| |||||||||||||||    
T  10080185 ctcaactctctctctaatgttgtcatttctaatc 10080218  T

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Target: chr8; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 86 - 303
Target Start/End: Complemental strand, 32043780 - 32043560
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacccttcatcttatctagtc 185  Q
    |||||||| |||| |||||| ||||| |||| |||||| |||| |||| || ||||||| | ||||||| |||||||||  |||| ||||| ||||| ||    
T  32043780 aactcattgatctttagatccttcttgatagtttctctaatagtttttttaggtcttcccctacctctagtgatttgacacccctccatctgatctattc 32043681  T
Q  186 gccatgctacagaatgcacaagttttctctccacgtgctcaaacat---aagcctagttttcaccatcttttctactataggtgatacctcaactctctc 282  Q
     || | |||||  || |||| || ||||||| || ||  |||||     ||| |||||||  |||||||||| |||||||||||||||| ||||||||||    
T  32043680 tccttactacaacatccacaggtcttctctctacatggccaaaccaccaaagtctagtttctaccatcttttgtactataggtgataccccaactctctc 32043581  T
Q  283 tctaatattgtcatttctaat 303  Q
    |||||| ||||||||||||||    
T  32043580 tctaatgttgtcatttctaat 32043560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 231 - 304
Target Start/End: Original strand, 13171889 - 13171962
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaatc 304  Q
    ||||| || ||| ||||||||||||||||||||||| | || |||||||||||||||| |||||||||||||||    
T  13171889 taagcatattttccaccatcttttctactataggtgcttccccaactctctctctaatcttgtcatttctaatc 13171962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 86 - 182
Target Start/End: Original strand, 38178352 - 38178448
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacccttcatcttatcta 182  Q
    |||||||| || ||||| ||||| ||||||| ||||||||||| ||||||| ||||||||| |||||||  |||||||||| ||| ||||| |||||    
T  38178352 aactcattaatgtctaggtctttgttaatagtttctcttatagtttttctaggtcttcctctacctctagcgatttgactatcctccatctgatcta 38178448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 245 - 304
Target Start/End: Complemental strand, 5908670 - 5908611
Alignment:
Q  245 accatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaatc 304  Q
    |||||||||||||||||||||  |||| |||||||||||||||| |||||||||||||||    
T  5908670 accatcttttctactataggttctaccccaactctctctctaatgttgtcatttctaatc 5908611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 98 - 303
Target Start/End: Complemental strand, 25985696 - 25985491
Alignment:
Q  98 tctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacccttcatcttatctagtcgccatgctacag 197  Q
    |||| ||| |||||||||| ||| | | ||| ||||||| ||||||||| ||||||| |||||||||| |||| ||||| |||||||| || | || ||     
T  25985696 tctaaatccttcttaatagtttcccatttagtttttctaggtcttcctctacctctagtgatttgactcccctacatctgatctagtctccttacttcaa 25985597  T
Q  198 aatgcacaagttttctctccacgtgctcaaa---cataagcctagttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtc 294  Q
    ||| |||| || ||||||| || |||  |||   |  ||| |||||||  |||||||||||||||||||||| |||| |||||||  ||||||| |||||    
T  25985596 aattcacatgtcttctctc-acatgccaaaatcacgcaagtctagtttctaccatcttttctactataggtgctaccccaactct--ctctaatgttgtc 25985500  T
Q  295 atttctaat 303  Q
     ||||||||    
T  25985499 gtttctaat 25985491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 88 - 170
Target Start/End: Complemental strand, 79215 - 79133
Alignment:
Q  88 ctcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactaccct 170  Q
    |||||| |||||||||||||||||||||| |||||||||||  |||||| | |||||||  | |||| |||||||||||||||    
T  79215 ctcattaatctctagatctttcttaatagtttctcttatagtgtttctaagccttcctctgcttctagtgatttgactaccct 79133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 231 - 304
Target Start/End: Original strand, 44681279 - 44681352
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaatc 304  Q
    ||||| || ||| |||||||||||||| |||||||| |||| ||||| |||||||||| |||||||||||||||    
T  44681279 taagcttattttccaccatcttttctattataggtgctaccacaactgtctctctaatgttgtcatttctaatc 44681352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 86 - 146
Target Start/End: Complemental strand, 4011273 - 4011213
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctc 146  Q
    |||||||| |||| ||||||||||||||||| ||||||||||| ||||||| |||||||||    
T  4011273 aactcattaatctttagatctttcttaatagtttctcttatagtttttctaggtcttcctc 4011213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 231 - 303
Target Start/End: Complemental strand, 9695673 - 9695601
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaat 303  Q
    |||||| ||||| ||||||||||||||||||||||| |||| ||| | ||||| |||| ||||||||||||||    
T  9695673 taagccgagtttccaccatcttttctactataggtgctaccccaaatatctctataatgttgtcatttctaat 9695601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 69 - 304
Target Start/End: Complemental strand, 16917390 - 16917153
Alignment:
Q  69 ataccatatttttatgaaactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacc 168  Q
    ||||||||||| |||  |||||||| ||||||| ||||| ||| |||| ||| | ||||| ||||||| |||||| || |||| || ||||||||||| |    
T  16917390 ataccatatttctatccaactcattaatctctaaatcttccttgatagtttcacctatagcttttctaggtcttcttctacctgtagtgatttgactatc 16917291  T
Q  169 cttcatcttatctagtcgccatgctacagaatgcacaagttttctctccacgtgctcaa---acataagcctagttttcaccatcttttctactataggt 265  Q
    ||  |||| ||||| || || | ||||| |||  |||||  ||||||  || ||| |||   || |||||||||||| |||||||||||||||| | |||    
T  16917290 ctcaatctgatctactctccttactaca-aatctacaagccttctctttacatgcccaaaccacctaagcctagtttgcaccatcttttctactttcggt 16917192  T
Q  266 gatacctcaactctctctctaatattgtcatttctaatc 304  Q
      |||| ||||| | || ||||| ||||||||| |||||    
T  16917191 actaccccaactttatcactaatgttgtcatttttaatc 16917153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 86 - 146
Target Start/End: Original strand, 35643698 - 35643758
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctc 146  Q
    |||||||| |||||||||||||||||||||  ||||||||||| ||||||| |||||||||    
T  35643698 aactcattaatctctagatctttcttaataatttctcttatagtttttctaggtcttcctc 35643758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 232 - 304
Target Start/End: Complemental strand, 44373817 - 44373745
Alignment:
Q  232 aagcctagttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaatc 304  Q
    ||||||| ||| |||||||||||||||| |||||| |||  |||||||| |||||||||| ||||||||||||    
T  44373817 aagcctattttccaccatcttttctactttaggtgctactccaactctcactctaatattttcatttctaatc 44373745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 87 - 281
Target Start/End: Complemental strand, 29700465 - 29700268
Alignment:
Q  87 actcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacccttcatcttatctagtcg 186  Q
    ||||||||||||| |  |||||| || ||| ||||||| ||| ||||||| ||||||||| ||||||| |||| |||||| ||| ||||| ||||| ||     
T  29700465 actcatttatctccaagtctttcctattagtttctcttttagtttttctaggtcttcctctacctctagtgatatgactatcctccatctaatctactct 29700366  T
Q  187 ccatgctacagaatgcacaagttttctctccacgtgctcaa---acataagcctagttttcaccatcttttctactataggtgatacctcaactctct 281  Q
    || | ||||||||| ||   || || |||| |  ||| |||   || |||||| | ||| | ||||||||||||||||||||| |||| |||||||||    
T  29700365 ccttactacagaatccaatggtcttttctctatatgcccaaaccacctaagccaactttcctccatcttttctactataggtgctaccccaactctct 29700268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 101 - 182
Target Start/End: Original strand, 3079711 - 3079791
Alignment:
Q  101 agatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacccttcatcttatcta 182  Q
    |||||||||||||||| |||||||||| ||| |||| ||||||||  ||||||| |||||| ||| |||||||||| |||||    
T  3079711 agatctttcttaatagtttctcttata-gttatctaggtcttcctttacctctagtgatttcactccccttcatctgatcta 3079791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 304
Target Start/End: Complemental strand, 35602048 - 35601990
Alignment:
Q  244 caccatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaatc 304  Q
    ||||||||||| || |||||||| |||||||  ||||||||||||||||||||||||||||    
T  35602048 caccatcttttttattataggtgttacctca--tctctctctaatattgtcatttctaatc 35601990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 86 - 182
Target Start/End: Original strand, 7531736 - 7531832
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacccttcatcttatcta 182  Q
    |||||||||||||||||||| ||| |||||| ||||| ||||| ||||||| |||| ||   ||||||| |||| ||||| |||| ||||| |||||    
T  7531736 aactcatttatctctagatccttcctaatagtttctcgtatagtttttctaggtctacccttacctctagtgatctgactcccctccatctgatcta 7531832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 86 - 146
Target Start/End: Complemental strand, 23023415 - 23023355
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctc 146  Q
    |||||||| |||| ||||||||||||| ||| ||||||||||| ||||||| |||||||||    
T  23023415 aactcattaatctgtagatctttcttagtagtttctcttatagtttttctaggtcttcctc 23023355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 86 - 178
Target Start/End: Original strand, 24399881 - 24399973
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacccttcatctta 178  Q
    |||||||| ||||| ||||| |||||||||| ||||||||||  ||||||| || || |||  |||||| | ||||||||| |||||||||||    
T  24399881 aactcattaatctcgagatccttcttaatagtttctcttataatttttctaagttttgctctgcctctagtaatttgactatccttcatctta 24399973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 86 - 166
Target Start/End: Original strand, 45512587 - 45512667
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgacta 166  Q
    |||||||| ||||| |  |||||| |||||| ||||||||||| ||||||| |||||||||  |||||| |||||||||||    
T  45512587 aactcattaatctccaagtctttcctaatagtttctcttatagtttttctaggtcttcctctgcctctagtgatttgacta 45512667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 86 - 229
Target Start/End: Complemental strand, 29520839 - 29520697
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacccttcatcttatctagtc 185  Q
    |||||||| ||||||| ||| ||| ||| || ||||||||||| ||||||| | ||||||| ||||||  ||||||||||| ||| ||||| ||||| ||    
T  29520839 aactcattaatctctaaatcgttcctaacagtttctcttatagtttttcta-ggcttcctctacctcttgtgatttgactatcctccatctgatctactc 29520741  T
Q  186 gccatgctacagaatgcacaagttttctctccacgtgctcaaac 229  Q
     || | ||||| |||  |||||| ||||||| || ||| |||||    
T  29520740 tccttactacaaaatctacaagtcttctctctacatgcccaaac 29520697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 231 - 282
Target Start/End: Original strand, 42493546 - 42493597
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaactctctc 282  Q
    |||||||||||| ||| ||||||||||||||||||| |||| ||||||||||    
T  42493546 taagcctagtttccacaatcttttctactataggtgttaccccaactctctc 42493597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 216
Target Start/End: Complemental strand, 16351568 - 16351438
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacccttcatcttatctagtc 185  Q
    |||||||| ||||||||||| |||||||||| |||||| |||| ||||||| ||||||  | | ||| | ||| |||||| |||| ||||| ||||| ||    
T  16351568 aactcattaatctctagatccttcttaatagtttctctaatagtttttctaggtcttctcctatctcaagtgacttgactcccctccatctgatctactc 16351469  T
Q  186 gccatgctacagaatgcacaagttttctctc 216  Q
     || | |||||  || || ||||||||||||    
T  16351468 tccttactacatgatccaaaagttttctctc 16351438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 176
Target Start/End: Original strand, 30783134 - 30783224
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacccttcatct 176  Q
    |||||||| |||||||||||||||| ||||| ||||||||| | ||| |||  ||||||||  |||||| |||| |||||| ||| |||||    
T  30783134 aactcattaatctctagatctttctaaatagtttctcttatggttttactagatcttcctctgcctctagtgatctgactatcctccatct 30783224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 182
Target Start/End: Complemental strand, 37826459 - 37826385
Alignment:
Q  108 tcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacccttcatcttatcta 182  Q
    ||||||||| ||||||||||| || |||| |||| ||||  |||||| |||||||||||| |||||||| |||||    
T  37826459 tcttaatagtttctcttatagtttatctaggtctccctctgcctctagtgatttgactactcttcatctgatcta 37826385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 136
Target Start/End: Original strand, 39967591 - 39967641
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttataggttttcta 136  Q
    |||||||| ||| |||||||||||||||||| ||||||||||| |||||||    
T  39967591 aactcattaatcgctagatctttcttaatagtttctcttatagtttttcta 39967641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 231 - 304
Target Start/End: Original strand, 36565481 - 36565554
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaatc 304  Q
    |||||||| |||  |||| ||||||||||||||||| |||| | ||||||||||||||  ||||||| ||||||    
T  36565481 taagcctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtcattcctaatc 36565554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 87 - 176
Target Start/End: Original strand, 38391986 - 38392075
Alignment:
Q  87 actcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacccttcatct 176  Q
    ||||||| |||| ||||||||||||||| | ||||| ||||| ||||||| |||||||||   || || |||  ||||||||||||||||    
T  38391986 actcattaatctgtagatctttcttaatggtttctcatatagtttttctaggtcttcctctgtctatagtgagctgactacccttcatct 38392075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 76 - 153
Target Start/End: Complemental strand, 43733407 - 43733330
Alignment:
Q  76 atttttatgaaactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctct 153  Q
    ||||||||  |||||||| ||||||||||| ||||  |||| ||||||| ||| ||||||| ||||||||| ||||||    
T  43733407 atttttatccaactcattaatctctagatccttctcgatagtttctcttgtagtttttctaggtcttcctctacctct 43733330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 304
Target Start/End: Complemental strand, 11733784 - 11733716
Alignment:
Q  236 ctagttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaatc 304  Q
    ||||||| |||||||| |||||  ||||||| || | ||||||| |||||||| |||||||||||||||    
T  11733784 ctagtttccaccatctattctatcataggtgttatcccaactctttctctaatgttgtcatttctaatc 11733716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 297
Target Start/End: Original strand, 30113451 - 30113503
Alignment:
Q  245 accatcttttctactataggtgatacctcaactctctctctaatattgtcatt 297  Q
    |||||||||||||||||| ||| |||| | ||||||||||||||| |||||||    
T  30113451 accatcttttctactatatgtgttaccccgactctctctctaataatgtcatt 30113503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 182
Target Start/End: Original strand, 30198358 - 30198454
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacccttcatcttatcta 182  Q
    |||||||| ||||| | |||||||||||||  ||||||||||| ||||||| |||| ||||  |||||| ||   |||||| ||||||||| |||||    
T  30198358 aactcattaatctcaatatctttcttaataatttctcttatagtttttctaagtctacctctgcctctagtgtactgactatccttcatctgatcta 30198454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 304
Target Start/End: Original strand, 36395191 - 36395263
Alignment:
Q  232 aagcctagttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaatc 304  Q
    ||||||| |||  |||| ||||||||||||||||| |||| | ||||||||||||||  ||||||| ||||||    
T  36395191 aagcctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtcattcctaatc 36395263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 182
Target Start/End: Original strand, 39953356 - 39953452
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacccttcatcttatcta 182  Q
    |||||||||||||||||||| ||| |||||| ||||||| ||| ||| ||| |||| || | ||||||| |||| ||| |  ||||||||| |||||    
T  39953356 aactcatttatctctagatccttcctaatagtttctcttttagttttcctaggtctacccctacctctagtgatctgattcgccttcatctgatcta 39953452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 245 - 304
Target Start/End: Original strand, 11523978 - 11524037
Alignment:
Q  245 accatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaatc 304  Q
    |||| ||||||||||||||||| |||| | ||||||||||||||  ||||||| ||||||    
T  11523978 accaacttttctactataggtgctacccccactctctctctaatggtgtcattcctaatc 11524037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 86 - 153
Target Start/End: Complemental strand, 28169582 - 28169515
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctct 153  Q
    |||||||| ||||| | ||||||| |||||| ||||||||||| |||| || ||||||||| ||||||    
T  28169582 aactcattaatctcaaaatctttcctaatagtttctcttatagtttttttaggtcttcctctacctct 28169515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 228 - 303
Target Start/End: Original strand, 30456449 - 30456524
Alignment:
Q  228 acataagcctagttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaat 303  Q
    ||||||| |||||||  ||||||||||||||||||||||  ||   |||| |||||||||| | ||||||||||||    
T  30456449 acataagtctagtttctaccatcttttctactataggtgcaactcgaactatctctctaatgtcgtcatttctaat 30456524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 285
Target Start/End: Complemental strand, 12611577 - 12611523
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaactctctctct 285  Q
    |||||||||||| |||||||||||||||| |||||| |||  || ||||||||||    
T  12611577 taagcctagtttccaccatcttttctactttaggtgctacaccagctctctctct 12611523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 302
Target Start/End: Complemental strand, 16351411 - 16351361
Alignment:
Q  252 tttctactataggtgatacctcaactctctctctaatattgtcatttctaa 302  Q
    ||||||||||||||| ||||  || |||||||||||| |||||||||||||    
T  16351411 tttctactataggtgctaccctaattctctctctaatgttgtcatttctaa 16351361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 104 - 146
Target Start/End: Original strand, 35914711 - 35914753
Alignment:
Q  104 tctttcttaatagattctcttataggttttctatgtcttcctc 146  Q
    |||||| |||||| ||||||||||| |||||||||||||||||    
T  35914711 tctttcctaatagtttctcttatagtttttctatgtcttcctc 35914753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 151
Target Start/End: Complemental strand, 39388973 - 39388907
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctc-ttataggttttctatgtcttcctccacct 151  Q
    |||||||| ||||||||||||||| |||||| ||||| |||||| ||||||| ||| ||||| ||||    
T  39388973 aactcattaatctctagatctttcctaatagtttctctttatagtttttctaggtcctcctctacct 39388907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 277
Target Start/End: Original strand, 41444570 - 41444612
Alignment:
Q  235 cctagttttcaccatcttttctactataggtgatacctcaact 277  Q
    |||||||| ||||||||||||||||||||||| |||| |||||    
T  41444570 cctagtttccaccatcttttctactataggtgctaccccaact 41444612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 247 - 302
Target Start/End: Original strand, 45512751 - 45512808
Alignment:
Q  247 catcttttctactataggtgatacctcaact--ctctctctaatattgtcatttctaa 302  Q
    |||||||||||||||||||| |||| |||||  |||||| ||||||| ||||||||||    
T  45512751 catcttttctactataggtgctaccccaactccctctctttaatattttcatttctaa 45512808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 304
Target Start/End: Original strand, 2518636 - 2518704
Alignment:
Q  235 cctagttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaatc 304  Q
    |||| ||| ||||||||||||||||  ||||| |||| ||| | |||||||||| |||||||||||||||    
T  2518636 cctattttccaccatcttttctacttgaggtgctaccccaattttctctctaat-ttgtcatttctaatc 2518704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 304
Target Start/End: Complemental strand, 2796599 - 2796526
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaatc 304  Q
    |||||||| |||  |||| ||||||||||||||| | |||| | ||||||||||||||  ||||||| ||||||    
T  2796599 taagcctattttctaccaacttttctactataggcgctacccccactctctctctaatggtgtcattcctaatc 2796526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 304
Target Start/End: Complemental strand, 7046376 - 7046303
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaatc 304  Q
    |||||| || || ||||||||||||||| || |||| ||||    ||||||||||||| |||||||||||||||    
T  7046376 taagccgaggttccaccatcttttctacgattggtgctacccagcctctctctctaatgttgtcatttctaatc 7046303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 142
Target Start/End: Complemental strand, 10109004 - 10108947
Alignment:
Q  85 aaactcatttatctctagatctttcttaatagattctcttataggttttctatgtctt 142  Q
    |||||| || |||||||||||||||||| ||| ||||||||| | ||||||| |||||    
T  10109004 aaactcgttaatctctagatctttcttattagtttctcttatggtttttctaggtctt 10108947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 303
Target Start/End: Complemental strand, 16705802 - 16705732
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaat 303  Q
    |||||||||| | ||||||||||| |||||||| || |||  |||||||  ||||||| ||||||||||||||    
T  16705802 taagcctagtctccaccatcttttttactatagatgctactccaactct--ctctaatgttgtcatttctaat 16705732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 301
Target Start/End: Original strand, 18474200 - 18474266
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtcatttcta 301  Q
    |||||||||||| ||||||| ||||||||||||||| |||     ||  ||||||||||||||||||||||    
T  18474200 taagcctagtttccaccatcatttctactataggtgctac----tctaactctctaatattgtcatttcta 18474266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 170
Target Start/End: Complemental strand, 23492237 - 23492141
Alignment:
Q  73 catatttttatgaaactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactaccct 170  Q
    ||||||| |||  |||||||| ||| ||| |||||||| | ||| |||||| |||| ||||||| ||||||||| |  |||| |||||||||||||||    
T  23492237 catatttctatccaactcattaatcgctacatctttctgagtagtttctctaatag-ttttctaggtcttcctctatatctagtgatttgactaccct 23492141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 303
Target Start/End: Complemental strand, 39051169 - 39051112
Alignment:
Q  246 ccatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaat 303  Q
    |||||||||| |  ||||||| || | |||||||||||| ||||||||||||||||||    
T  39051169 ccatcttttcaatgataggtgttatcccaactctctctcgaatattgtcatttctaat 39051112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 73 - 145
Target Start/End: Complemental strand, 5908849 - 5908777
Alignment:
Q  73 catatttttatgaaactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcct 145  Q
    |||||||| ||  |||||||| |||  | ||||||| ||||||| ||||||||||| ||||||| ||||||||    
T  5908849 catattttgatccaactcattaatccttggatcttttttaatagtttctcttatagtttttctaggtcttcct 5908777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 73 - 153
Target Start/End: Complemental strand, 13589682 - 13589602
Alignment:
Q  73 catatttttatgaaactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctct 153  Q
    |||||||| ||  |||||||| |||| || ||||||  |||||| ||||||||||| ||||||| |||||| || ||||||    
T  13589682 catattttgattcaactcattaatctttaaatcttttctaatagtttctcttatagtttttctaagtcttcatctacctct 13589602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 245 - 285
Target Start/End: Original strand, 33666753 - 33666793
Alignment:
Q  245 accatcttttctactataggtgatacctcaactctctctct 285  Q
    |||||||||||||| ||||||| |||| |||||||||||||    
T  33666753 accatcttttctacgataggtgctaccccaactctctctct 33666793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 105 - 153
Target Start/End: Complemental strand, 45419406 - 45419358
Alignment:
Q  105 ctttcttaatagattctcttataggttttctatgtcttcctccacctct 153  Q
    ||||| |||||| ||||||||||| ||||||| ||||||||| ||||||    
T  45419406 ctttcctaatagtttctcttatagtttttctaggtcttcctctacctct 45419358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 80; Significance: 2e-37; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 69 - 307
Target Start/End: Original strand, 37481692 - 37481933
Alignment:
Q  69 ataccatatttttatgaaactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacc 168  Q
    |||||||||||||||  |||||||||||| |||||||||||||||||| |||||| |||| ||||||  |||||| || ||||| | |||| | ||| ||    
T  37481692 ataccatatttttatccaactcatttatcgctagatctttcttaatagtttctctaatagtttttcttggtcttcatctacctccagtgatctaactccc 37481791  T
Q  169 cttcatcttatctagtcgccatgctacagaatgcacaagttttctctccacgtgctcaa---acataagcctagttttcaccatcttttctactataggt 265  Q
    || ||||| ||||| || ||   ||||| ||| ||||||| ||||||| || |||||||   || ||||||||| ||  |||||||||| |||||||||     
T  37481792 ctccatctgatctactctcctaactacaaaattcacaagtcttctctctacatgctcaaaccacctaagcctaggttcaaccatcttttttactatagga 37481891  T
Q  266 gatacctcaactctctctctaatattgtcatttctaatcaaa 307  Q
      |||| |||||||||||||||| ||||||||||||||||||    
T  37481892 actaccccaactctctctctaatgttgtcatttctaatcaaa 37481933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 69 - 182
Target Start/End: Original strand, 26784415 - 26784528
Alignment:
Q  69 ataccatatttttatgaaactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacc 168  Q
    ||||||||||| |||  |||||||| ||||||| |||||||||||||| ||||||||||| ||||||| ||||| |||  |||||| |||||||||||||    
T  26784415 ataccatatttctattcaactcattaatctctatatctttcttaatagtttctcttatagtttttctaggtctttctctgcctctagtgatttgactacc 26784514  T
Q  169 cttcatcttatcta 182  Q
    || |||||||||||    
T  26784515 ctccatcttatcta 26784528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 90 - 304
Target Start/End: Complemental strand, 38435138 - 38434920
Alignment:
Q  90 catttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacccttcatcttatctagtcgcca 189  Q
    |||| |||||||||||||||||||||| ||||||| ||| ||||||| |||| ||||  |||||| |||| |||||| ||| ||| | ||||| || ||     
T  38435138 cattaatctctagatctttcttaatagtttctcttgtagtttttctaggtctacctctgcctctagtgatctgactatcctccatatgatctactctcct 38435039  T
Q  190 tgctacagaatgcacaagttttctctccacgtgctcaaacat----aagcctagttttcaccatcttttctactataggtgatacctcaactctctctct 285  Q
    | ||| || ||  |||||| ||||||  || ||| |||||      ||| ||||||| ||||||||||||||||||||||| |||| ||| |||||||||    
T  38435038 tactaaagcatctacaagtcttctctttacatgcccaaaccacccaaagtctagtttccaccatcttttctactataggtgctaccccaattctctctct 38434939  T
Q  286 aatattgtcatttctaatc 304  Q
    ||| |||||||||||||||    
T  38434938 aatgttgtcatttctaatc 38434920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 69 - 182
Target Start/End: Original strand, 19235059 - 19235172
Alignment:
Q  69 ataccatatttttatgaaactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacc 168  Q
    ||||||||||| |||  || ||||| |||||||||||||||| ||||| ||||||||||| ||||||| ||||||||| | ||||| |||||||||| ||    
T  19235059 ataccatatttctatccaaatcattaatctctagatctttctcaatagtttctcttatagtttttctaggtcttcctctatctctagtgatttgactccc 19235158  T
Q  169 cttcatcttatcta 182  Q
    || ||||| |||||    
T  19235159 ctccatctgatcta 19235172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 86 - 285
Target Start/End: Complemental strand, 43832288 - 43832087
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacccttcatcttatctagtc 185  Q
    |||||||| ||||||||||| |||||||||| ||||||||||| || | || |||||||||  | |||| |||||||| ||| || ||||| ||||| ||    
T  43832288 aactcattaatctctagatccttcttaatagtttctcttatagtttgtttaggtcttcctctgcgtctactgatttgattactctccatctgatctactc 43832189  T
Q  186 gccatgctacagaatgcacaagttttctctccacgtgctcaa---acataagcctagttttcaccatcttttctactataggtgatacctcaactctctc 282  Q
     ||   ||||| ||| |||| |||||||||  || ||| |||   || |||||||||||| || ||| |||| |||||||||||||||| ||||||||||    
T  43832188 tcctaactacataatccacatgttttctctgtacatgcccaaatcacctaagcctagtttcca-catattttttactataggtgataccccaactctctc 43832090  T
Q  283 tct 285  Q
    |||    
T  43832089 tct 43832087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 71 - 271
Target Start/End: Original strand, 23714341 - 23714541
Alignment:
Q  71 accatatttttatgaaactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactaccct 170  Q
    |||||||||||||| | |||||| ||||||||||||||  ||||   ||||||||||| ||||||| |||||| || || |||| |||||||||| |||     
T  23714341 accatatttttatgcagctcattaatctctagatctttgataat---ttctcttatagtttttctaagtcttcatctacgtctagtgatttgactcccca 23714437  T
Q  171 tcatcttatctagtcgccatgctacagaatgcacaagttttctctccacgtgctcaa---acataagcctagttttcaccatcttttctactataggtga 267  Q
     ||| | ||||| || || | ||||| ||| ||||||| ||||||| || |||  ||   ||||||| ||||||| ||||||||||||||||||| |||     
T  23714438 ccatttgatctactctccttactacataatccacaagtcttctctctacatgcctaaactacataagtctagtttccaccatcttttctactatatgtgc 23714537  T
Q  268 tacc 271  Q
    ||||    
T  23714538 tacc 23714541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 71 - 271
Target Start/End: Original strand, 24102013 - 24102213
Alignment:
Q  71 accatatttttatgaaactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactaccct 170  Q
    |||||||||||||| | |||||| ||||||||||||||  ||||   ||||||||||| ||||||| |||||| || || |||| |||||||||| |||     
T  24102013 accatatttttatgcagctcattaatctctagatctttgataat---ttctcttatagtttttctaagtcttcatctacgtctagtgatttgactcccca 24102109  T
Q  171 tcatcttatctagtcgccatgctacagaatgcacaagttttctctccacgtgctcaa---acataagcctagttttcaccatcttttctactataggtga 267  Q
     ||| | ||||| || || | ||||| ||| ||||||| ||||||| || |||  ||   ||||||| ||||||| ||||||||||||||||||| |||     
T  24102110 ccatttgatctactctccttactacataatccacaagtcttctctctacatgcctaaactacataagtctagtttccaccatcttttctactatatgtgc 24102209  T
Q  268 tacc 271  Q
    ||||    
T  24102210 tacc 24102213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 10 - 146
Target Start/End: Original strand, 7431905 - 7432041
Alignment:
Q  10 tttatcccacaaagtgagttctagtacatagatcaaatgacaccactaagatcgatgagataccatatttttatgaaactcatttatctctagatctttc 109  Q
    |||||||||| ||||||| ||   | ||| ||||||||||||||| || |||| || | |||||||||||||||  |||||||| ||||||||||| |||    
T  7431905 tttatcccactaagtgaggtcggttgcatggatcaaatgacaccattatgatctattatataccatatttttattcaactcattaatctctagatccttc 7432004  T
Q  110 ttaatagattctcttataggttttctatgtcttcctc 146  Q
    ||||||| |||||  |||| ||||||| || ||||||    
T  7432005 ttaatagtttctccaatagtttttctaggttttcctc 7432041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 86 - 264
Target Start/End: Original strand, 44437813 - 44437994
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacccttcatcttatctagtc 185  Q
    |||||||||||||||||||| |||||||||| ||||| ||||| ||||||| |||| || | ||||||| |||| ||||| |||| ||||| |||||  |    
T  44437813 aactcatttatctctagatccttcttaatagtttctcatatagtttttctaggtctacccctacctctagtgatctgactcccctccatctcatctatac 44437912  T
Q  186 gccatgctacagaatgcacaagttttctctccacgtgctcaa---acataagcctagttttcaccatcttttctactatagg 264  Q
     || |  |||||||| ||||||| ||||||| || |||  ||   || || | |||||||  ||||||||||||||||||||    
T  44437913 tccttattacagaatccacaagtcttctctctacatgccgaaaccacctatgtctagtttctaccatcttttctactatagg 44437994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 231 - 299
Target Start/End: Complemental strand, 11412763 - 11412695
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtcatttc 299  Q
    |||||||| ||| |||||| |||||||||||||||| |||| |||||||||||||||| ||||||||||    
T  11412763 taagcctattttccaccatattttctactataggtgctaccccaactctctctctaatgttgtcatttc 11412695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 86 - 320
Target Start/End: Original strand, 9556461 - 9556697
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacccttcatcttatctagtc 185  Q
    |||||||| ||| |||||||||||||||||| || |||||||| ||||| | ||||||||   |||||| |  |||||||| ||| ||||| || || |     
T  9556461 aactcattaatcactagatctttcttaatagtttatcttatagtttttcaaggtcttcctttgcctctagtagtttgactatcctccatctgatatactt 9556560  T
Q  186 gccatgctacagaatgcacaagttttctctccacgtgctcaaaca---taagcctagttttcaccatcttttctactataggtgatacctcaactctctc 282  Q
      | | |||||||||  ||  || ||||||| || |||  ||||    |||||||| ||| |||||| |||||||||||| ||| |||| ||||| ||||    
T  9556561 ttcttactacagaatctacttgtcttctctctacatgcctaaaccacctaagcctattttccaccat-ttttctactataagtgttaccccaactttctc 9556659  T
Q  283 tctaatattgtcatttctaatcaaatccagtataatct 320  Q
    |||||| |||||||||||||||| |||| || ||||||    
T  9556660 tctaatgttgtcatttctaatcatatcccgtctaatct 9556697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 95 - 182
Target Start/End: Complemental strand, 33504404 - 33504317
Alignment:
Q  95 atctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacccttcatcttatcta 182  Q
    |||||||||||||||||||||| ||||||||||| ||||||| || || |||  |||||| |||| |||||||||| ||||| |||||    
T  33504404 atctctagatctttcttaatagtttctcttatagtttttctaggtttttctctgcctctagtgatctgactaccctccatctgatcta 33504317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 69 - 278
Target Start/End: Complemental strand, 12141751 - 12141539
Alignment:
Q  69 ataccatatttttatgaaactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacc 168  Q
    |||||||||||  ||  || ||||| |||||||  |||||| |||||| ||||| ||||| ||||||| ||||||||| ||||||  | ||||||||| |    
T  12141751 ataccatatttggatccaagtcattaatctctaagtctttcctaatagtttctcctatagcttttctaggtcttcctctacctcttgtaatttgactatc 12141652  T
Q  169 cttcatcttatctagtcgccatgctacagaatgcacaagttttctctccacgtgctcaa---acataagcctagttttcaccatcttttctactataggt 265  Q
    ||  |||| ||||| || || | ||| |||||  ||| || |||| || |||||| |||   || |||||||  ||| ||||||||||||||||||||||    
T  12141651 ctcaatctgatctactctccttactagagaatctacaggtcttctttctacgtgcccaaaccacctaagcctcttttccaccatcttttctactataggt 12141552  T
Q  266 gatacctcaactc 278  Q
    | |||| ||||||    
T  12141551 gctaccccaactc 12141539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 73 - 182
Target Start/End: Original strand, 12026084 - 12026193
Alignment:
Q  73 catatttttatgaaactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacccttc 172  Q
    ||||||| ||| ||||||||| |||||||||||||||||||||| ||||| ||||| || |||| |||||  ||| |||| | |||| |||||||||  |    
T  12026084 catatttctatcaaactcattaatctctagatctttcttaatagtttctcctatagtttctctaggtcttaatccgcctccagtgatgtgactacccacc 12026183  T
Q  173 atcttatcta 182  Q
    |||| |||||    
T  12026184 atctgatcta 12026193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 86 - 215
Target Start/End: Complemental strand, 42543425 - 42543296
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacccttcatcttatctagtc 185  Q
    |||||||||||||||||||| ||| |||||| ||||||||||| ||||||| |||| || | ||||||| |||| ||||| |||| ||| | ||||| ||    
T  42543425 aactcatttatctctagatccttcctaatagtttctcttatagtttttctaggtctacccctacctctagtgatctgactcccctccatttgatctactc 42543326  T
Q  186 gccatgctacagaatgcacaagttttctct 215  Q
     ||   ||||||||| |||| || ||||||    
T  42543325 tcctaactacagaatccacaggtcttctct 42543296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 231 - 304
Target Start/End: Original strand, 43752187 - 43752260
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaatc 304  Q
    |||||||| |||  |||| ||||||||||||||||| |||| |||||||||||||||||| |||| ||||||||    
T  43752187 taagcctattttctaccaccttttctactataggtgctaccccaactctctctctaatatggtcagttctaatc 43752260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 86 - 146
Target Start/End: Complemental strand, 33287611 - 33287551
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctc 146  Q
    |||||||| || ||||||||||||||||||| ||||||||||| ||||||| |||||||||    
T  33287611 aactcattaatttctagatctttcttaatagtttctcttatagtttttctaggtcttcctc 33287551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 73 - 128
Target Start/End: Complemental strand, 1626398 - 1626343
Alignment:
Q  73 catatttttatgaaactcatttatctctagatctttcttaatagattctcttatag 128  Q
    |||||||||||  |||||||| |||||||||||||||||||||| |||||||||||    
T  1626398 catatttttatacaactcattaatctctagatctttcttaatagtttctcttatag 1626343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 86 - 165
Target Start/End: Complemental strand, 19024368 - 19024289
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgact 165  Q
    |||||||| |||| ||||||||||||||||| ||||||||| | | ||||| | ||||||  ||||||||||||||||||    
T  19024368 aactcattaatctttagatctttcttaatagtttctcttatggttcttctacgccttcctatacctctaatgatttgact 19024289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 86 - 154
Target Start/End: Complemental strand, 26670958 - 26670890
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctcta 154  Q
    |||||||| ||||||| |||||||||||||| |||| |||||| |||| || ||||||||| |||||||    
T  26670958 aactcattaatctctaaatctttcttaatagtttcttttatagtttttgtaggtcttcctctacctcta 26670890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 86 - 182
Target Start/End: Original strand, 37470225 - 37470321
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacccttcatcttatcta 182  Q
    |||||||| |||||||||||| || |||||| ||||||||||| ||||  | ||||||||| ||| ||| |||| |||||||| | ||||| |||||    
T  37470225 aactcattaatctctagatctgtcctaatagtttctcttatagttttttcaggtcttcctctaccactagtgatctgactaccttccatctaatcta 37470321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 86 - 182
Target Start/End: Complemental strand, 38860368 - 38860272
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacccttcatcttatcta 182  Q
    |||||||  |||||||||||||||||||||| |||||||||   ||||| | |||||| ||  |||||| | ||||||||||||| ||||| |||||    
T  38860368 aactcatgaatctctagatctttcttaatagtttctcttatcatttttccaagtcttcgtctgcctctagtaatttgactaccctccatctcatcta 38860272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 88 - 167
Target Start/End: Complemental strand, 18188940 - 18188861
Alignment:
Q  88 ctcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactac 167  Q
    |||||| |||||||||||||||| ||||| ||||||||||  ||||||| |||| |||   |||||| ||||||||||||    
T  18188940 ctcattaatctctagatctttctgaatagtttctcttataatttttctaagtctccctttgcctctagtgatttgactac 18188861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 231 - 281
Target Start/End: Complemental strand, 11017356 - 11017306
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaactctct 281  Q
    |||||| ||||| ||| ||||||||||||||||||| ||||||||||||||    
T  11017356 taagccgagtttccacgatcttttctactataggtgctacctcaactctct 11017306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 310
Target Start/End: Complemental strand, 42092707 - 42092482
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacccttcatcttatctagtc 185  Q
    |||| ||| ||||||| |||||| ||||||| ||||| ||||| ||||||| |||| |||    || || ||| ||||||||||| ||||| ||||| ||    
T  42092707 aactaattaatctctacatcttttttaatagtttctcctatagtttttctaggtctacctgtctctatagtgaattgactaccctccatctaatctactc 42092608  T
Q  186 gccatgctacagaatgcacaagttttctctccacgtgctcaaa---cataagcctagttttcaccatcttttctactataggtgatacctcaactctctc 282  Q
     || | ||||| |||  |||||  ||||||| || ||| || |   | ||| | ||||||  ||||||||||||| |||||| | |||| ||||||||||    
T  42092607 tccttactacaaaatctacaagccttctctctacatgcccagatcacctaatcttagtttctaccatcttttctagtataggcgctaccccaactctctc 42092508  T
Q  283 tctaatattgtcatttctaatcaaatcc 310  Q
    |  || ||||||||||||||||| ||||    
T  42092507 t--aacattgtcatttctaatcatatcc 42092482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 231 - 313
Target Start/End: Complemental strand, 7825402 - 7825318
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaac--tctctctctaatattgtcatttctaatcaaatccagt 313  Q
    ||||| || |||||||||| ||| | |||||||||| |||  ||||  ||||||||||||| ||||||||||||||| |||||||    
T  7825402 taagcttatttttcaccatatttacaactataggtgctactccaacactctctctctaatagtgtcatttctaatcatatccagt 7825318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 231 - 304
Target Start/End: Original strand, 13240985 - 13241058
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaatc 304  Q
    |||||||||||| ||||||||||||||  |||  || |||  ||| |||||||||||| |||||||||||||||    
T  13240985 taagcctagtttccaccatcttttctaacatacttgctactccaattctctctctaatgttgtcatttctaatc 13241058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 69 - 170
Target Start/End: Original strand, 29548712 - 29548813
Alignment:
Q  69 ataccatatttttatgaaactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacc 168  Q
    |||||| |||| ||| |||| |||| ||||||| |||||||||||||  ||||||||||| ||||  | |||||||||  | |||  |||||||||||||    
T  29548712 ataccacatttctatcaaacacattaatctctaaatctttcttaataatttctcttatagttttttcaggtcttcctctgcttctcgtgatttgactacc 29548811  T
Q  169 ct 170  Q
    ||    
T  29548812 ct 29548813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 236 - 304
Target Start/End: Complemental strand, 40759137 - 40759068
Alignment:
Q  236 ctagttttcaccatcttttctactataggtgatacctcaac-tctctctctaatattgtcatttctaatc 304  Q
    ||||||| |||||| |||||||||||| ||| || | |||| |||||||||||| |||||||||||||||    
T  40759137 ctagtttccaccattttttctactataagtgctaacccaacctctctctctaatgttgtcatttctaatc 40759068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 283
Target Start/End: Complemental strand, 7615335 - 7615287
Alignment:
Q  235 cctagttttcaccatcttttctactataggtgatacctcaactctctct 283  Q
    |||||||| ||||||||||||||||||||||| |||| ||| |||||||    
T  7615335 cctagtttgcaccatcttttctactataggtgttaccccaagtctctct 7615287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 231 - 303
Target Start/End: Complemental strand, 19024222 - 19024150
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaat 303  Q
    ||||| || ||| |||||||||||| | |||||||| ||||  ||| ||||||||||| ||||||||||||||    
T  19024222 taagcttactttccaccatcttttcaaatataggtgctacccaaaccctctctctaatgttgtcatttctaat 19024150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 86 - 181
Target Start/End: Original strand, 4598654 - 4598749
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacccttcatcttatct 181  Q
    |||||||||||||||||||| ||| |||||| ||||| ||||| ||||||| || | || | ||||||| |||  ||||| |||| ||| ||||||    
T  4598654 aactcatttatctctagatccttcctaatagcttctcgtatagtttttctaggtttaccactacctctagtgacctgactcccctccattttatct 4598749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 245 - 304
Target Start/End: Complemental strand, 8180808 - 8180749
Alignment:
Q  245 accatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaatc 304  Q
    |||| ||||||||||||||||| |||| | ||||||||||||||  ||||||| ||||||    
T  8180808 accaacttttctactataggtgctacccccactctctctctaatggtgtcattcctaatc 8180749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 86 - 141
Target Start/End: Original strand, 12489894 - 12489949
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttataggttttctatgtct 141  Q
    |||||||||||||||||||| ||| |||||| ||||| ||||| ||||||| ||||    
T  12489894 aactcatttatctctagatccttcctaatagtttctcatatagtttttctaggtct 12489949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 245 - 304
Target Start/End: Complemental strand, 36183479 - 36183420
Alignment:
Q  245 accatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaatc 304  Q
    |||| ||||||||||||||||| |||| | ||||||||||||||  ||||||| ||||||    
T  36183479 accaacttttctactataggtgctacccctactctctctctaattgtgtcattcctaatc 36183420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 304
Target Start/End: Complemental strand, 786857 - 786799
Alignment:
Q  246 ccatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaatc 304  Q
    ||||||||||||||||||||| ||| |||||||||  | |||| ||| |||||||||||    
T  786857 ccatcttttctactataggtgctacttcaactctcattgtaatgttgccatttctaatc 786799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 192
Target Start/End: Original strand, 5759087 - 5759193
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacccttcatcttatctagtc 185  Q
    |||||||| ||||||||||| |||||  ||| |||||| |||| ||||||| || || | | ||||||| |||||||| | |||| ||||| ||||| ||    
T  5759087 aactcattgatctctagatccttcttggtagtttctctaatagtttttctaggtatttccctacctctagtgatttgattcccctccatctgatctactc 5759186  T
Q  186 gccatgc 192  Q
     ||||||    
T  5759187 tccatgc 5759193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 277
Target Start/End: Complemental strand, 18958949 - 18958903
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaact 277  Q
    |||||||| ||| ||||||||||||||||||||||| |||| |||||    
T  18958949 taagcctattttccaccatcttttctactataggtgctaccccaact 18958903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 281
Target Start/End: Complemental strand, 41330171 - 41330121
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaactctct 281  Q
    |||||||| |||| | |||||||||||||| ||||| ||||||||||||||    
T  41330171 taagcctatttttgatcatcttttctactaaaggtgttacctcaactctct 41330121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 170
Target Start/End: Complemental strand, 4481651 - 4481594
Alignment:
Q  113 atagattctcttataggttttctatgtcttcctccacctctaatgatttgactaccct 170  Q
    |||| ||||||||||  ||||||| |||||||||||||||||  | ||||||||||||    
T  4481651 atagtttctcttataatttttctaggtcttcctccacctctagcggtttgactaccct 4481594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 285
Target Start/End: Original strand, 4598807 - 4598856
Alignment:
Q  236 ctagttttcaccatcttttctactataggtgatacctcaactctctctct 285  Q
    |||||||  ||||||||| |||||||||||| |||| |||||||||||||    
T  4598807 ctagtttctaccatctttactactataggtgctaccccaactctctctct 4598856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 265
Target Start/End: Original strand, 14197404 - 14197437
Alignment:
Q  232 aagcctagttttcaccatcttttctactataggt 265  Q
    ||||||||||| ||||||||||||||||||||||    
T  14197404 aagcctagtttccaccatcttttctactataggt 14197437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 304
Target Start/End: Complemental strand, 38429926 - 38429853
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaatc 304  Q
    |||||||| |||  |||| ||||||||||||||||| | || | ||||||||||||||  ||||||| ||||||    
T  38429926 taagcctattttctaccaacttttctactataggtgctgcccccactctctctctaatggtgtcattcctaatc 38429853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 304
Target Start/End: Original strand, 41763282 - 41763354
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaatc 304  Q
    |||||||| |||  |||| ||||||||||||||||| |||| | ||||||||||||||  ||||||| ||||||    
T  41763282 taagcctattttctaccaacttttctactataggtgttacc-ccactctctctctaatggtgtcattcctaatc 41763354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 281
Target Start/End: Complemental strand, 44411753 - 44411704
Alignment:
Q  232 aagcctagttttcaccatcttttctactataggtgatacctcaactctct 281  Q
    ||||||| ||| |||||||||| |||||||||||| ||| ||||||||||    
T  44411753 aagcctattttccaccatctttcctactataggtgctacttcaactctct 44411704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 231 - 283
Target Start/End: Original strand, 19337090 - 19337142
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaactctctct 283  Q
    ||||| || ||| |||||||||| |||||||||||| |||| |||||||||||    
T  19337090 taagcttattttccaccatctttactactataggtgctaccccaactctctct 19337142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 176
Target Start/End: Complemental strand, 19855650 - 19855562
Alignment:
Q  88 ctcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacccttcatct 176  Q
    |||||| | |||| ||||||||||||||| |||| |||||| || |||| |||||||||  |||||  || ||||||||| ||| ||||    
T  19855650 ctcattaacctctggatctttcttaatagtttcttttatagtttatctaggtcttcctctgcctctgctggtttgactactcttgatct 19855562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 23915787 - 23915827
Alignment:
Q  88 ctcatttatctctagatctttcttaatagattctcttatag 128  Q
    |||||| |||||||||| ||||||||||| |||||||||||    
T  23915787 ctcattaatctctagatttttcttaatagtttctcttatag 23915827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 146
Target Start/End: Original strand, 37452318 - 37452378
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctc 146  Q
    |||||||| |||||||  ||||||||||||| | ||||||||  ||||||| |||||||||    
T  37452318 aactcattaatctctaattctttcttaatagctcctcttataatttttctaggtcttcctc 37452378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 95 - 127
Target Start/End: Original strand, 42149761 - 42149793
Alignment:
Q  95 atctctagatctttcttaatagattctcttata 127  Q
    |||||||||||||||||||||| ||||||||||    
T  42149761 atctctagatctttcttaatagtttctcttata 42149793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 71; Significance: 4e-32; HSPs: 60)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 71 - 304
Target Start/End: Complemental strand, 43423924 - 43423688
Alignment:
Q  71 accatatttttatgaaactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactaccct 170  Q
    ||||||||| |||  |||||| | |||||||||||||||||||| |  |||||| ||  ||||||| ||||||||| ||||||| ||||||||||||  |    
T  43423924 accatatttctatccaactcactaatctctagatctttcttaatggtctctcttgtaatttttctaggtcttcctctacctctagtgatttgactactat 43423825  T
Q  171 tcatcttatctagtcgccatgctacagaatgcacaagttttctctccacgtgctcaaaca---taagcctagttttcaccatcttttctactataggtga 267  Q
     |||||  |||| ||  | | ||||| |||  |||||| ||||||| || ||  |||||    |||||||||||| |||||||||||||||||||||||     
T  43423824 ccatctagtctactctacttactacataatctacaagtcttctctctacatggccaaaccacctaagcctagtttccaccatcttttctactataggtgt 43423725  T
Q  268 tacctcaactctctctctaatattgtcatttctaatc 304  Q
    |||| |||||||||||||||| | |||||||||||||    
T  43423724 taccccaactctctctctaatgtggtcatttctaatc 43423688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 71 - 285
Target Start/End: Original strand, 3818933 - 3819150
Alignment:
Q  71 accatatttttatgaaactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactaccct 170  Q
    ||||||||| |||  |||||||| ||||||| |||||||||||||| ||||||||||| ||||| | |||||||||   ||||| || ||||| ||||||    
T  3818933 accatatttctattcaactcattaatctctaaatctttcttaatagtttctcttatagtttttcaaggtcttcctctttctctagtggtttgattaccct 3819032  T
Q  171 tcatcttatctagtcgccatgctacagaatgcacaagttttctctccacgtgctcaa---acataagcctagttttcaccatcttttctactataggtga 267  Q
     ||||| ||||| || |  | ||| ||||| ||||||| |||| || || ||| |||   || |||| ||||||  ||||||||||||||| |||||||     
T  3819033 ccatctgatctactctctttactagagaatccacaagtcttctttctacatgcccaaaccacttaagtctagttaccaccatcttttctaccataggtgc 3819132  T
Q  268 tacctcaactctctctct 285  Q
    ||||||||||||||||||    
T  3819133 tacctcaactctctctct 3819150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 69 - 297
Target Start/End: Complemental strand, 38869089 - 38868858
Alignment:
Q  69 ataccatatttttatgaaactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacc 168  Q
    ||||||||| | |||  ||| |||| ||| |||||||||||||||||  ||||||||||| ||||||| |||||| ||  ||||||||||||||||||||    
T  38869089 ataccatatatctatccaacccattaatcgctagatctttcttaataatttctcttatagtttttctaggtcttcttctgcctctaatgatttgactacc 38868990  T
Q  169 cttcatcttatctagtcgccatgctacagaatgcacaagttttctctccacgtgctcaa---acataagcctagttttcaccatcttttctactataggt 265  Q
    || ||||| ||||| || ||  |||| |||||  || ||| ||||||| || ||| |||   || |||||| ||||| ||||||||||||||  ||||||    
T  38868989 ctccatctaatctactctcctcgctagagaatctactagtgttctctctacatgcccaaaccacctaagccgagtttccaccatcttttctatgataggt 38868890  T
Q  266 gatacctcaactctctctctaatattgtcatt 297  Q
    | |||  |||| |||||| |||| ||||||||    
T  38868889 gctactccaaccctctctttaatgttgtcatt 38868858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 34 - 182
Target Start/End: Complemental strand, 6025847 - 6025699
Alignment:
Q  34 tacatagatcaaatgacaccactaagatcgatgagataccatatttttatgaaactcatttatctctagatctttcttaatagattctcttataggtttt 133  Q
    ||||| ||||||||||| |||  | | || || ||||||||||||| |||  |||||||| |||||||||||||| ||| |||  |||||||||| ||||    
T  6025847 tacatggatcaaatgacgccatcatgttctatcagataccatatttctatccaactcattaatctctagatcttttttactagtatctcttatagttttt 6025748  T
Q  134 ctatgtcttcctccacctctaatgatttgactacccttcatcttatcta 182  Q
    ||| |||||||||  |||||| ||||||||||||||| ||||| |||||    
T  6025747 ctaggtcttcctctgcctctagtgatttgactaccctacatctgatcta 6025699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 72 - 176
Target Start/End: Complemental strand, 42501312 - 42501208
Alignment:
Q  72 ccatatttttatgaaactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactaccctt 171  Q
    |||||||| |||  |||||||| |||| ||||||||||||||||  ||||||||||| ||||||| || |||||| |||||||||||||||||||||||     
T  42501312 ccatatttctatccaactcattaatctatagatctttcttaataatttctcttatagtttttctaggttttcctctacctctaatgatttgactaccctc 42501213  T
Q  172 catct 176  Q
    |||||    
T  42501212 catct 42501208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 86 - 288
Target Start/End: Complemental strand, 26016627 - 26016422
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacccttcatcttatctagtc 185  Q
    |||||||||||||||||||| ||| |||||| ||||||||||| ||||||| |||| |    ||||||| |||| ||||| |||||||||| ||||| ||    
T  26016627 aactcatttatctctagatcattcctaatagtttctcttatagtttttctaggtctactcttacctctagtgatctgactccccttcatctgatctaatc 26016528  T
Q  186 gccatgctacagaatgcacaagttttctctccacgtgctcaa---acataagcctagttttcaccatcttttctactataggtgatacctcaactctctc 282  Q
     || |||||||||||||| | || |||| || || | | |||   || |||  |||||||  ||||||||||||  |||||||| |||| ||||||||||    
T  26016527 tccttgctacagaatgcataggtcttctttctacatacccaaaccacctaaatctagtttctaccatcttttctcatataggtgttaccccaactctctc 26016428  T
Q  283 tctaat 288  Q
    ||||||    
T  26016427 tctaat 26016422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 86 - 303
Target Start/End: Complemental strand, 40419829 - 40419609
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacccttcatcttatctagtc 185  Q
    |||||||||||||||||||| ||| |||||| ||||  ||||| |||||||||||| || | ||||||| | || | ||| |||| ||||| | ||| ||    
T  40419829 aactcatttatctctagatccttcataatagtttcttgtatagattttctatgtctacccctacctctagttatctaactcccctccatctgaactactc 40419730  T
Q  186 gccatgctacagaatgcacaagttttctctccacgtgctcaaaca---taagcctagttttcaccatcttttctactataggtgatacctcaactctctc 282  Q
     || ||||||| ||| |||| || ||||||| || ||| |||||    |||| ||||||   ||||||| |||||||||| ||  |||| ||||||||||    
T  40419729 tccttgctacataatccacatgtcttctctctacatgcccaaaccacttaagtctagttactaccatctattctactataagttctaccccaactctctc 40419630  T
Q  283 tctaatattgtcatttctaat 303  Q
    |||||| ||||||||||||||    
T  40419629 tctaatgttgtcatttctaat 40419609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 231 - 310
Target Start/End: Complemental strand, 9509360 - 9509281
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaatcaaatcc 310  Q
    |||||||| |||| |||||||||||||||||||||| |||| ||||||||||||||||  ||||||||||||||| ||||    
T  9509360 taagcctattttttaccatcttttctactataggtgctaccccaactctctctctaatggtgtcatttctaatcatatcc 9509281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 86 - 303
Target Start/End: Original strand, 32404618 - 32404837
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacccttcatcttatctagtc 185  Q
    |||||||| ||||||| ||||||| |||||| ||||||||||| |||| || ||||||||| ||||||  |||| |||||| ||| |||||| |||| ||    
T  32404618 aactcattaatctctaaatctttcctaatagtttctcttatagtttttgtaggtcttcctctacctcttgtgatatgactatcctccatcttctctactc 32404717  T
Q  186 gccatgctacagaatgcacaagttttctctccacgtgctcaa---acataagcctagttttcaccatcttttctactataggtgatacctcaactctctc 282  Q
     || | ||| |||||  ||| || ||||||| || |   |||   || |||||||| ||| ||||||||||| ||||||||||| |||| |||||| |||    
T  32404718 tccttactatagaatctacaggtcttctctctacatatccaaaccacctaagcctattttccaccatcttttttactataggtgttacc-caactcactc 32404816  T
Q  283 tctaatattgtcatttctaat 303  Q
    || ||| ||||| ||||||||    
T  32404817 tcgaatgttgtcgtttctaat 32404837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 86 - 171
Target Start/End: Complemental strand, 12231555 - 12231470
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactaccctt 171  Q
    |||||||| ||||| ||||||||||||||||  |||||||||| ||||||| || ||||||||||| || ||||||||||||||||    
T  12231555 aactcattaatctcgagatctttcttaatagtctctcttatagtttttctaagtattcctccacctttagtgatttgactaccctt 12231470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 69 - 182
Target Start/End: Original strand, 30834052 - 30834165
Alignment:
Q  69 ataccatatttttatgaaactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacc 168  Q
    |||| |||||| |||  |||||||| ||||||||||||||| |||||| ||||||||||| ||||||| |||||||||  ||||||  ||||||||||||    
T  30834052 atactatatttctatccaactcattaatctctagatctttcgtaatagtttctcttatagcttttctaggtcttcctctccctctatcgatttgactacc 30834151  T
Q  169 cttcatcttatcta 182  Q
     | ||||| |||||    
T  30834152 ttccatctgatcta 30834165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 228 - 304
Target Start/End: Complemental strand, 51812570 - 51812494
Alignment:
Q  228 acataagcctagttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaatc 304  Q
    ||||||||||||||| |||||||||||||||||||| || |||| |||||||||||||||  | |||||||||||||    
T  51812570 acataagcctagtttccaccatcttttctactatagttgttaccccaactctctctctaaagtagtcatttctaatc 51812494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 233 - 297
Target Start/End: Complemental strand, 1661470 - 1661406
Alignment:
Q  233 agcctagttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtcatt 297  Q
    |||||| ||| ||||||||||||||||||||||| |||| |||||||||||| ||||||||||||    
T  1661470 agcctattttccaccatcttttctactataggtgctaccccaactctctctcaaatattgtcatt 1661406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 99 - 303
Target Start/End: Complemental strand, 16943351 - 16943145
Alignment:
Q  99 ctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacccttcatcttatctagtcgccatgctacaga 198  Q
    |||||||||||||||||| ||||||||| | ||| ||| |||||| |   |||||| | ||||||| || |||||||| ||||| || |||| || ||||    
T  16943351 ctagatctttcttaatagtttctcttatcgctttcctaggtcttcttttgcctctagttatttgaccactcttcatctgatctactctccatactgcaga 16943252  T
Q  199 atgcacaagttttctctccacgtgctcaaaca--taagcctagttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtcat 296  Q
    ||  | | || ||||| | ||  || |||||   |||  ||||||| ||||||||||||||||||||||  |||| |||||||||| |||||||||| ||    
T  16943251 atctaaatgtcttctccctacacgcccaaaccactaaatctagtttccaccatcttttctactataggtactaccccaactctctccctaatattgtaat 16943152  T
Q  297 ttctaat 303  Q
     ||||||    
T  16943151 gtctaat 16943145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 69 - 200
Target Start/End: Original strand, 33560933 - 33561064
Alignment:
Q  69 ataccatatttttatgaaactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacc 168  Q
    ||||||||||| |||  |||||  | ||||||||||||| |||||||| ||| |||| || ||||||| | |||||||  |||||| |||||||||||||    
T  33560933 ataccatatttatatccaactcgctaatctctagatcttacttaatagtttcccttacagtttttctaggacttcctctgcctctagtgatttgactacc 33561032  T
Q  169 cttcatcttatctagtcgccatgctacagaat 200  Q
    || |||| |||||| || || | |||||||||    
T  33561033 ctccatcatatctactctccttactacagaat 33561064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 69 - 162
Target Start/End: Original strand, 8342956 - 8343049
Alignment:
Q  69 ataccatatttttatgaaactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttg 162  Q
    |||| |||||| |||  |||||||| |||||||||||||| ||||| | ||||||||||| ||||||| ||||||||| | ||||| |||||||    
T  8342956 atactatatttctatccaactcattaatctctagatctttattaattgtttctcttatagtttttctaggtcttcctctatctctagtgatttg 8343049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 235 - 304
Target Start/End: Original strand, 35828794 - 35828863
Alignment:
Q  235 cctagttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaatc 304  Q
    |||| ||| ||||||||||||||| ||||||| |||   |||||||||||||||||||||||||||||||    
T  35828794 cctattttccaccatcttttctaccataggtgctactcaaactctctctctaatattgtcatttctaatc 35828863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 86 - 285
Target Start/End: Complemental strand, 40416561 - 40416359
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacccttcatcttatctagtc 185  Q
    |||||||| |||| ||||||||||||||||| || |||||||| ||||||| |||||| ||   || |  |||| |||||| ||| ||||| ||||| ||    
T  40416561 aactcattaatctatagatctttcttaatagtttgtcttatagtttttctaggtcttcttctgtctttggtgatctgactatcctgcatctgatctactc 40416462  T
Q  186 gccatgctacagaatgcacaagttttctctccacgtgctcaaaca---taagcctagttttcaccatcttttctactataggtgatacctcaactctctc 282  Q
     || | ||||| |||  |||  | ||||||| || |||  ||||    ||||||| |||| ||||||||||||||||||||||| |||  ||||||||||    
T  40416461 tccttactacaaaatctacagttcttctctctacatgcctaaaccacctaagcctcgtttccaccatcttttctactataggtgctactccaactctctc 40416362  T
Q  283 tct 285  Q
    |||    
T  40416361 tct 40416359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 231 - 310
Target Start/End: Original strand, 9599634 - 9599713
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaatcaaatcc 310  Q
    |||||||| |||  |||||||||||||||||||||| |||  ||||||||||||||||  ||||||| ||||||| ||||    
T  9599634 taagcctattttctaccatcttttctactataggtgttactccaactctctctctaatgatgtcattcctaatcatatcc 9599713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 86 - 169
Target Start/End: Complemental strand, 44008769 - 44008686
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactaccc 169  Q
    |||||||| ||||||||||||||||  |||| |||||||| |  ||||||| |||||||||  |||||| ||||||||||||||    
T  44008769 aactcattgatctctagatctttctcgatagtttctcttagattttttctaggtcttcctctgcctctagtgatttgactaccc 44008686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 86 - 176
Target Start/End: Original strand, 853877 - 853967
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacccttcatct 176  Q
    |||||| | ||||||||||| |||||||||| ||||| ||||| |||| || |||||||||  |||||| |||||||||||  ||||||||    
T  853877 aactcactaatctctagatccttcttaatagtttctcgtatagattttttaggtcttcctctgcctctagtgatttgactaatcttcatct 853967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 86 - 143
Target Start/End: Original strand, 8203226 - 8203283
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttc 143  Q
    |||||||| |||||||||||||| ||||||| ||||||||||| ||||||| ||||||    
T  8203226 aactcattaatctctagatcttttttaatagtttctcttatagtttttctaggtcttc 8203283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 231 - 303
Target Start/End: Complemental strand, 17815514 - 17815444
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaat 303  Q
    |||||||||||| |||||||||||| | |||| ||  |||||||  |||||||||||||||||||||||||||    
T  17815514 taagcctagtttccaccatcttttccattataagtcctacctca--tctctctctaatattgtcatttctaat 17815444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 86 - 143
Target Start/End: Original strand, 19969304 - 19969361
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttc 143  Q
    |||||||| |||||||||||||| ||||||| ||||||||||| ||||||| ||||||    
T  19969304 aactcattaatctctagatctttgttaatagtttctcttatagtttttctaggtcttc 19969361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 246 - 302
Target Start/End: Original strand, 19908294 - 19908350
Alignment:
Q  246 ccatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaa 302  Q
    ||||||||| ||||||||||| |||| ||||||||||| |||| |||||||||||||    
T  19908294 ccatcttttttactataggtgctaccacaactctctctttaattttgtcatttctaa 19908350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 86 - 214
Target Start/End: Complemental strand, 28528545 - 28528417
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacccttcatcttatctagtc 185  Q
    |||||||| ||||||||||| |||||||||| |||| |||||| |||| || ||||||| | || ||||  ||||||||| |||| ||| | ||||| |     
T  28528545 aactcattaatctctagatccttcttaatagtttctgttatagtttttttaggtcttcccctacttctagggatttgactcccctccatttgatctactg 28528446  T
Q  186 gccatgctacagaatgcacaagttttctc 214  Q
     || | ||||||||| ||||||| |||||    
T  28528445 tccttactacagaatccacaagtcttctc 28528417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 71 - 159
Target Start/End: Original strand, 29577219 - 29577307
Alignment:
Q  71 accatatttttatgaaactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgat 159  Q
    |||||||||| ||  | |||||| |||||||||||||||||||||| || | || ||| ||||||| ||||||||| ||||||| ||||    
T  29577219 accatattttgatccagctcattaatctctagatctttcttaatagtttatgttgtagtttttctaggtcttcctctacctctagtgat 29577307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 69 - 176
Target Start/End: Complemental strand, 17815686 - 17815579
Alignment:
Q  69 ataccatatttttatgaaactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacc 168  Q
    ||||||||||| |||  |||||||  ||| |||||||||||| ||||| ||||||||||  ||||||| |||||||    |||| ||||||||||||||     
T  17815686 ataccatatttctatctaactcatcaatcactagatctttctaaatagtttctcttataatttttctaggtcttcccttgcctccaatgatttgactact 17815587  T
Q  169 cttcatct 176  Q
    || |||||    
T  17815586 ctccatct 17815579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 95 - 264
Target Start/End: Original strand, 48431507 - 48431679
Alignment:
Q  95 atctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacccttcatcttatctagtcgccatgcta 194  Q
    ||||||| |||||||||||||| ||||||||||| |||| |  ||||||||| ||||||  | ||  ||||| ||| ||||| ||| | || |  | |||    
T  48431507 atctctaaatctttcttaatagtttctcttatagtttttttgggtcttcctctacctcttgtaatccgactatcctccatctgatcaactctctttacta 48431606  T
Q  195 cagaatgcacaagttttctctccacgtgctcaa---acataagcctagttttcaccatcttttctactatagg 264  Q
    || |||  |||||| ||||||| || ||| |||   || |||||||| ||| |||||||||||||||||||||    
T  48431607 caaaatctacaagtcttctctctacatgcccaaaccacctaagcctattttccaccatcttttctactatagg 48431679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 231 - 304
Target Start/End: Complemental strand, 696311 - 696238
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaatc 304  Q
    |||||||| |||  |||| ||||||||||||||||| |||| | ||||||||||||||  ||||||| ||||||    
T  696311 taagcctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtcattcctaatc 696238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 231 - 304
Target Start/End: Complemental strand, 1210787 - 1210714
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaatc 304  Q
    |||||||| |||  |||| ||||||||||||||||| |||| | ||||||||||||||  ||||||| ||||||    
T  1210787 taagcctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtcattcctaatc 1210714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 244 - 285
Target Start/End: Complemental strand, 2544628 - 2544587
Alignment:
Q  244 caccatcttttctactataggtgatacctcaactctctctct 285  Q
    ||||||||||||||||||||||| |||| |||||||||||||    
T  2544628 caccatcttttctactataggtgctaccccaactctctctct 2544587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 231 - 304
Target Start/End: Original strand, 4001695 - 4001768
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaatc 304  Q
    |||||||| |||  |||| ||||||||||||||||| |||| | ||||||||||||||  ||||||| ||||||    
T  4001695 taagcctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtcattcctaatc 4001768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 231 - 304
Target Start/End: Complemental strand, 15085976 - 15085903
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaatc 304  Q
    |||||||| |||  |||| ||||||||||||||||| |||| | ||||||||||||||  ||||||| ||||||    
T  15085976 taagcctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtcattcctaatc 15085903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 231 - 304
Target Start/End: Original strand, 32082985 - 32083058
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaatc 304  Q
    |||||||| |||  |||| ||||||||||||||||| |||| | ||||||||||||||  ||||||| ||||||    
T  32082985 taagcctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtcattcctaatc 32083058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 86 - 127
Target Start/End: Original strand, 39422019 - 39422060
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttata 127  Q
    ||||||||||||||||||||||||||| ||| ||||||||||    
T  39422019 aactcatttatctctagatctttcttattagtttctcttata 39422060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 231 - 304
Target Start/End: Original strand, 51441005 - 51441078
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaatc 304  Q
    |||||||| |||  |||| ||||||||||||||||| |||| | ||||||||||||||  ||||||| ||||||    
T  51441005 taagcctattttctaccaacttttctactataggtgttacccccactctctctctaatggtgtcattcctaatc 51441078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 108 - 165
Target Start/End: Complemental strand, 51584912 - 51584855
Alignment:
Q  108 tcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgact 165  Q
    ||||||||| ||||||||||| ||||||| ||||||| | ||||||| ||||||||||    
T  51584912 tcttaatagtttctcttatagtttttctaggtcttcccctacctctagtgatttgact 51584855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 154
Target Start/End: Complemental strand, 7083080 - 7083012
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctcta 154  Q
    |||||||| |||||||| ||  ||||||||| ||||||||||| ||||||| ||||||| | |||||||    
T  7083080 aactcattaatctctagttccatcttaatagtttctcttatagcttttctaggtcttcccctacctcta 7083012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 174
Target Start/End: Original strand, 11941672 - 11941760
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacccttcat 174  Q
    |||||| | ||||||| ||||||  |||||| ||||||||| | ||||||| ||||||||||| || || |||| |||| |||||||||    
T  11941672 aactcaataatctctaaatcttttctaatagcttctcttattgtttttctaggtcttcctccatctttagtgatctgacaacccttcat 11941760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 231 - 303
Target Start/End: Original strand, 39422282 - 39422353
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaat 303  Q
    |||| |||||||  || ||||||||||||||| ||| |||  ||||||||| |||||||||||||||||||||    
T  39422282 taagtctagtttctactatcttttctactatatgtgttactccaactctct-tctaatattgtcatttctaat 39422353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 245 - 304
Target Start/End: Complemental strand, 8391800 - 8391741
Alignment:
Q  245 accatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaatc 304  Q
    |||| ||||||||||||||||| |||| | ||||||||||||||  ||||||| ||||||    
T  8391800 accaacttttctactataggtgctacccccactctctctctaatggtgtcattcctaatc 8391741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 86 - 153
Target Start/End: Original strand, 52561681 - 52561748
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctct 153  Q
    |||||||| | ||||| ||||||| ||| || ||||||||||| ||||||| ||||||||| ||||||    
T  52561681 aactcattaacctctaaatctttcctaacagtttctcttatagtttttctaagtcttcctctacctct 52561748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 247 - 310
Target Start/End: Original strand, 52561867 - 52561930
Alignment:
Q  247 catcttttctactataggtgatacctcaactctctctctaatattgtcatttctaatcaaatcc 310  Q
    |||| ||||||||| ||||| |||| ||||||||||||||||  ||||||| ||||||| ||||    
T  52561867 catcatttctactaaaggtgctaccccaactctctctctaatggtgtcattcctaatcatatcc 52561930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 281
Target Start/End: Original strand, 8343098 - 8343148
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaactctct 281  Q
    |||||||||||| ||||||||||||||||| ||||| |||| |||| ||||    
T  8343098 taagcctagtttccaccatcttttctactaaaggtgttaccccaacactct 8343148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 175
Target Start/End: Complemental strand, 8796396 - 8796310
Alignment:
Q  89 tcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacccttcatc 175  Q
    ||||| || ||||||||||||||||||| |||||||| || |||| |  |||||||||  |||||| |||| |||||| ||| ||||    
T  8796396 tcattaatatctagatctttcttaatagtttctcttaaagtttttattggtcttcctctgcctctagtgatctgactatcctccatc 8796310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 250 - 304
Target Start/End: Complemental strand, 9592757 - 9592703
Alignment:
Q  250 cttttctactataggtgatacctcaactctctctctaatattgtcatttctaatc 304  Q
    ||||||||||||||||| |||| | ||||||||||||||  ||||||| ||||||    
T  9592757 cttttctactataggtgctacccccactctctctctaatggtgtcattcctaatc 9592703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 107 - 165
Target Start/End: Original strand, 12261826 - 12261884
Alignment:
Q  107 ttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgact 165  Q
    |||||| ||| ||||||||||| ||||||| ||||| | ||||||||| ||||||||||    
T  12261826 ttcttactagtttctcttatagtttttctaggtcttaccccacctctagtgatttgact 12261884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 140
Target Start/End: Original strand, 43367710 - 43367776
Alignment:
Q  74 atatttttatgaaactcatttatctctagatctttcttaatagattctcttataggttttctatgtc 140  Q
    ||||||||||  |||||||| |||| ||||||||| || |||| |||| |||||| |||||||||||    
T  43367710 atatttttattcaactcattaatctttagatctttgttgatagtttcttttatagtttttctatgtc 43367776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 305
Target Start/End: Complemental strand, 50636146 - 50636076
Alignment:
Q  235 cctagttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaatca 305  Q
    ||||||||||||||||||||||| | |||||| | ||| |||||| | |  ||| ||||||||||||||||    
T  50636146 cctagttttcaccatcttttctaatgtaggtgctgcctgaactcttttttcaatgttgtcatttctaatca 50636076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 265
Target Start/End: Complemental strand, 7921880 - 7921843
Alignment:
Q  228 acataagcctagttttcaccatcttttctactataggt 265  Q
    |||||| |||||||| ||||||||||||||||||||||    
T  7921880 acataaacctagtttccaccatcttttctactataggt 7921843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 147
Target Start/End: Original strand, 8676957 - 8677018
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctcc 147  Q
    |||||||| ||||||| |||||| ||||||| ||||||||||| ||| ||| || |||||||    
T  8676957 aactcattaatctctaaatcttttttaatagtttctcttatagatttcctaggttttcctcc 8677018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 252
Target Start/End: Original strand, 10569172 - 10569328
Alignment:
Q  95 atctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacccttcatcttatctagtcgccatgcta 194  Q
    |||||||||||||||||||||| |||| |||    |||| | ||| ||||||  |||||| |||||||| |||||| ||||| |||||  | || | |||    
T  10569172 atctctagatctttcttaatagtttctttta----ttttttttgtgttcctctgcctctagtgatttgattaccctccatctaatctaccctccgtacta 10569267  T
Q  195 cagaatgcacaagttttctctccacgtgctcaa---acataagcctagttttcaccatctt 252  Q
    ||||||  ||| || ||||||| || ||| |||   || |||||| |||||||||||||||    
T  10569268 cagaatctacaggtcttctctctacatgcccaaaccacctaagccaagttttcaccatctt 10569328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 288
Target Start/End: Original strand, 17267936 - 17267993
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaactctctctctaat 288  Q
    |||||| ||||| ||| |||||||||||||||| || |||| ||| ||||||||||||    
T  17267936 taagccaagtttccacaatcttttctactatagatgctaccccaaatctctctctaat 17267993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 304
Target Start/End: Complemental strand, 27704039 - 27703978
Alignment:
Q  244 caccatcttttctactata-ggtgatacctcaactctctctctaatattgtcatttctaatc 304  Q
    ||||||||||||||||||| |||| |||| || |||||| ||||| || |||||||||||||    
T  27704039 caccatcttttctactataaggtgttaccccatctctctttctaacatggtcatttctaatc 27703978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 304
Target Start/End: Original strand, 30202370 - 30202443
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaatc 304  Q
    |||||||| |||  |||| | ||||||||||||||| |||| | ||||||||||||||  ||||||| ||||||    
T  30202370 taagcctattttctaccaacctttctactataggtgctacccccactctctctctaatggtgtcattcctaatc 30202443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 304
Target Start/End: Original strand, 32231214 - 32231267
Alignment:
Q  251 ttttctactataggtgatacctcaactctctctctaatattgtcatttctaatc 304  Q
    |||||||||||||||| |||| | ||||||||||||||  ||||||| ||||||    
T  32231214 ttttctactataggtgctacccccactctctctctaatggtgtcattcctaatc 32231267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 288
Target Start/End: Original strand, 34792589 - 34792646
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaactctctctctaat 288  Q
    |||||||| |||  |||| ||||||||||||||||| |||| | ||||||||||||||    
T  34792589 taagcctactttctaccaacttttctactataggtgctacccccactctctctctaat 34792646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 283
Target Start/End: Original strand, 13827961 - 13828009
Alignment:
Q  235 cctagttttcaccatcttttctactataggtgatacctcaactctctct 283  Q
    |||||||| ||||||||||||||||||||||| | || ||| |||||||    
T  13827961 cctagtttccaccatcttttctactataggtgctgccccaaatctctct 13828009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 304
Target Start/End: Original strand, 43375832 - 43375891
Alignment:
Q  244 caccatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaatc 304  Q
    |||| ||||||| |||||||||  |||| |||||||||  |||||||||||||||||||||    
T  43375832 caccgtcttttcaactataggtt-taccccaactctcttcctaatattgtcatttctaatc 43375891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 67; Significance: 9e-30; HSPs: 88)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 69 - 310
Target Start/End: Complemental strand, 54470414 - 54470170
Alignment:
Q  69 ataccatatttttatgaaactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacc 168  Q
    ||||||||||| |||  |||||||| ||||||||| |||| ||||||||||||||||||| ||||||  |||||| |   |||||| | ||||||||||     
T  54470414 ataccatatttctatccaactcattaatctctagaactttattaatagattctcttatagtttttcttggtcttcttttgcctctagtaatttgactact 54470315  T
Q  169 cttcatcttatctagtcgccatgctacagaatgcacaagttttctctccacgtgctcaaaca---taagcctagttttcaccatcttttctactataggt 265  Q
    || ||| | || || || || | ||||| |||  ||| || ||||||| || ||| |||||    |||| ||||||| ||||||||||||||||||||||    
T  54470314 ctccatttgatttactctccttactacataatttacatgtcttctctctacatgcccaaaccacttaagtctagtttccaccatcttttctactataggt 54470215  T
Q  266 gatacctcaactctctctctaatattgtcatttctaatcaaatcc 310  Q
    | |||| |||||||||||||||| |||| ||||| ||||| ||||    
T  54470214 gctaccccaactctctctctaatgttgttatttcaaatcatatcc 54470170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 69 - 287
Target Start/End: Original strand, 42639095 - 42639316
Alignment:
Q  69 ataccatatttttatgaaactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacc 168  Q
    ||||||||||| |||  |||||||| ||| |||||||||||||||||| |||||||  || |||||||  | |||||| ||||||| |||||||||| ||    
T  42639095 ataccatatttctatccaactcattaatcgctagatctttcttaatagtttctcttgcagtttttctagatattcctctacctctagtgatttgactccc 42639194  T
Q  169 cttcatcttatctagtcgccatgctacagaatgcacaagttttctctccacgtgctcaa---acataagcctagttttcaccatcttttctactataggt 265  Q
    || ||||| || ||  | || | | ||||||| || |||| ||||||| || ||  |||   || ||||||| |||| ||||||||||||||||||||||    
T  42639195 ctccatctaatttaccccccttaccacagaatccataagtcttctctctacatgtccaaaccacctaagcctggtttccaccatcttttctactataggt 42639294  T
Q  266 gatacctcaactctctctctaa 287  Q
    |  |||  ||||||||||||||    
T  42639295 gcaaccctaactctctctctaa 42639316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 86 - 229
Target Start/End: Original strand, 31961358 - 31961501
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacccttcatcttatctagtc 185  Q
    |||||||||||||||||||||||| |||||| ||||||||||| ||||||| |||| || | ||||||| |||||||||| | || ||||| ||| | ||    
T  31961358 aactcatttatctctagatctttcctaatagtttctcttatagtttttctaggtctacccctacctctagtgatttgactcctctccatctaatccactc 31961457  T
Q  186 gccatgctacagaatgcacaagttttctctccacgtgctcaaac 229  Q
     ||   ||||||||| ||||||| ||||||| || ||| |||||    
T  31961458 tcctaactacagaatccacaagtcttctctctacatgcccaaac 31961501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 71 - 304
Target Start/End: Complemental strand, 33710129 - 33709893
Alignment:
Q  71 accatatttttatgaaactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactaccct 170  Q
    ||||||||| |||  |||||||| |||||||||||  ||||||||| ||||| ||| | |||| || |  |||| |   ||||| |||| ||||||||||    
T  33710129 accatatttctatccaactcattaatctctagatcagtcttaatagtttctcgtatggtttttataagcattcccctgtctctagtgatctgactaccct 33710030  T
Q  171 tcatcttatctagtcgccatgctacagaatgcacaagttttctctccacgtgctcaaaca---taagcctagttttcaccatcttttctactataggtga 267  Q
     | ||| ||| | || |  | ||||||||| ||||  | |||||||||| |||  ||||    ||| |||||||| |||||||||||||||||||||||     
T  33710029 ccttctgatccactctctttactacagaatccacagttcttctctccacatgcctaaaccacctaaacctagtttccaccatcttttctactataggtgt 33709930  T
Q  268 tacctcaactctctctctaatattgtcatttctaatc 304  Q
    |||| |||||||||||||||| ||| |||||||||||    
T  33709929 taccccaactctctctctaatgttgccatttctaatc 33709893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 86 - 303
Target Start/End: Original strand, 31897520 - 31897738
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacccttcatcttatctagtc 185  Q
    |||||||||||||||||||| ||| |||||| ||||||||||| ||||||| |||| || | ||||||| |||| ||||| |||| ||||| ||| | ||    
T  31897520 aactcatttatctctagatccttcctaatagtttctcttatagtttttctaggtctacccctacctctagtgatctgactcccctccatctaatcgactc 31897619  T
Q  186 gccatgctacagaatgcacaagttttctctccacgtgctcaa---acataagcctagttttcaccatcttttctactataggtgatacctcaactctctc 282  Q
     ||   ||||||||| |||| || | ||||| || ||| |||   ||  ||| |||||||  ||||||||||||||  |||||| |||| ||||| ||||    
T  31897620 tcctaactacagaatccacaggtctgctctctacatgcgcaaaccacccaagtctagtttctaccatcttttctac--taggtgctaccccaactatctc 31897717  T
Q  283 tctaatattgtcatttctaat 303  Q
    |||||| |  |||||||||||    
T  31897718 tctaatgtcctcatttctaat 31897738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 69 - 182
Target Start/End: Original strand, 7681985 - 7682098
Alignment:
Q  69 ataccatatttttatgaaactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacc 168  Q
    ||||||||||| |||  |||||||| |||| ||||| |||||| |||| ||||||||||| ||||| | |||||||||  |||||| |||| ||||||||    
T  7681985 ataccatatttctatctaactcattaatctatagatttttcttgatagtttctcttatagtttttccaggtcttcctctgcctctagtgatgtgactacc 7682084  T
Q  169 cttcatcttatcta 182  Q
    || ||||| |||||    
T  7682085 ctccatctaatcta 7682098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 86 - 182
Target Start/End: Original strand, 40018281 - 40018377
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacccttcatcttatcta 182  Q
    |||||||| ||||||||||||||||||| || || |||||||| ||||||| |||||  |   |||||| ||||||||||||||||||||| |||||    
T  40018281 aactcattgatctctagatctttcttaacagtttttcttatagtttttctaagtctttatttgcctctagtgatttgactacccttcatctgatcta 40018377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 231 - 303
Target Start/End: Original strand, 44047588 - 44047660
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaat 303  Q
    ||||||||| ||  |||| ||||||||||||||||| |||| |||||||||||||||| ||||||||||||||    
T  44047588 taagcctagattctaccaccttttctactataggtgctaccccaactctctctctaatgttgtcatttctaat 44047660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 236 - 303
Target Start/End: Original strand, 10775667 - 10775734
Alignment:
Q  236 ctagttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaat 303  Q
    |||||||  |||||||||||||||||||||| |||| |||| ||||||||||| ||||||||||||||    
T  10775667 ctagtttctaccatcttttctactataggtgttaccccaacactctctctaatgttgtcatttctaat 10775734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 86 - 303
Target Start/End: Complemental strand, 17900670 - 17900450
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacccttcatcttatctagtc 185  Q
    |||||||||||||||| ||||||| | |||| |||||||| || |||||||      || | |||||||||||| ||||| | || ||||| ||||| ||    
T  17900670 aactcatttatctctatatctttcctgatagtttctcttaaagtttttctacagacacccctacctctaatgatctgactcctctccatctgatctactc 17900571  T
Q  186 gccatgctacagaatgcacaagttttctctccacgtgctcaaac---ataagcctagttttcaccatcttttctactataggtgatacctcaactctctc 282  Q
     ||   ||||| ||| |||| || ||||||| |||||| |||||   || || |||||||  ||| |||||||||||||||||| |||| ||||||  ||    
T  17900570 tcctatctacataatccacaggtcttctctctacgtgcccaaaccacatgagtctagtttctaccgtcttttctactataggtgctaccccaactccgtc 17900471  T
Q  283 tctaatattgtcatttctaat 303  Q
    |||||| | ||||||||||||    
T  17900470 tctaatgtcgtcatttctaat 17900450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 236 - 303
Target Start/End: Complemental strand, 44360124 - 44360053
Alignment:
Q  236 ctagttttcaccatcttttctactataggtgatacctcaactctctc----tctaatattgtcatttctaat 303  Q
    |||||||  ||||||||||||||||||||||||||| ||||||||||    |||||||||||||||||||||    
T  44360124 ctagtttctaccatcttttctactataggtgataccccaactctctctccatctaatattgtcatttctaat 44360053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 86 - 303
Target Start/End: Complemental strand, 46372214 - 46371994
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacccttcatcttatctagtc 185  Q
    |||||||||||||||||||| ||| |||||| ||||||||||| ||||||| |||| || | ||||||| |||| || || ||||  |||| ||||  ||    
T  46372214 aactcatttatctctagatccttcctaatagtttctcttatagtttttctaggtctacccctacctctagtgatctggctcccctctatctgatctgctc 46372115  T
Q  186 gccatgctacagaatgcacaagttttctctccacgtgctcaa---acataagcctagttttcaccatcttttctactataggtgatacctcaactctctc 282  Q
      | |  |||||||| |||| || ||||||| || ||| |||   || |||| |||||||  || || ||||| |||||||||| |||| ||||||| ||    
T  46372114 ttcttagtacagaatccacatgtcttctctctacatgcacaaaccacctaagtctagtttctacaatattttcgactataggtgctaccccaactctatc 46372015  T
Q  283 tctaatattgtcatttctaat 303  Q
    |||||| |  |||||||||||    
T  46372014 tctaatgtcatcatttctaat 46371994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 86 - 175
Target Start/End: Complemental strand, 26356809 - 26356720
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacccttcatc 175  Q
    |||||||| ||||||||||| ||| ||| || ||||||||||| ||||||| ||||||| | ||||||| |||||||||| |||| ||||    
T  26356809 aactcattaatctctagatccttcataacagtttctcttatagtttttctaggtcttcccctacctctagtgatttgactcccctccatc 26356720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 231 - 304
Target Start/End: Complemental strand, 37797894 - 37797821
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaatc 304  Q
    |||||||| |||  |||| ||||||||||||||||| |||||| ||||||||||||||  ||||||||||||||    
T  37797894 taagcctattttctaccaacttttctactataggtgctacctccactctctctctaatggtgtcatttctaatc 37797821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 86 - 304
Target Start/End: Complemental strand, 50680930 - 50680708
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacccttcatcttatctagtc 185  Q
    |||||||| |||||||||||||||| ||||  ||||||||||| ||||||| |||| ||||  ||| || |||| | |||| |||||||   ||||| ||    
T  50680930 aactcattaatctctagatctttctaaataatttctcttatagtttttctaggtctacctctgcctatagtgatctaactatccttcattggatctactc 50680831  T
Q  186 gccatgctacagaatgcacaagttttctctccacgtgc--tcaaaca--taagcctagttttcaccatcttttctactataggtgatacctcaactctct 281  Q
     || | |||| ||||  |||||  ||||||| || |||  | || ||  |||||||| ||| |||||||||||| |||||||||| | ||  ||||||||    
T  50680830 tccttactacggaatctacaagccttctctctacatgccataaaccacctaagcctattttccaccatcttttcaactataggtgttgccctaactctct 50680731  T
Q  282 ctctaatattgtcatttctaatc 304  Q
    ||||||| |||| ||||| ||||    
T  50680730 ctctaatgttgttatttccaatc 50680708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 71 - 146
Target Start/End: Complemental strand, 37488296 - 37488221
Alignment:
Q  71 accatatttttatgaaactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctc 146  Q
    |||||||||| || ||||| ||| || ||||||||||||||||||| ||||||||||| ||||||| |||| ||||    
T  37488296 accatattttgatcaaacttattaatttctagatctttcttaatagtttctcttatagtttttctaggtctacctc 37488221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 85 - 257
Target Start/End: Original strand, 38903809 - 38903986
Alignment:
Q  85 aaactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacccttcatc---ttatct 181  Q
    ||||||||| |||| ||| ||||||||||||| |||||||||| |||||||| |||||| ||  ||||||   ||||||||||||| |  |   | ||||    
T  38903809 aaactcattaatctttaggtctttcttaatagtttctcttata-gttttctaggtcttcatctgcctctagccatttgactaccctcctccgcatgatct 38903907  T
Q  182 agtcgccatgctacagaatgcacaagttttctctccacgtgctcaaac---ataagcctagttttcaccatcttttcta 257  Q
    | || |||| ||||| |||  |||||| |||||||||| |||||||||    |||||| ||||| ||||||||||||||    
T  38903908 actctccatactacaaaatctacaagtcttctctccacatgctcaaaccaactaagccgagtttccaccatcttttcta 38903986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 86 - 176
Target Start/End: Complemental strand, 47147563 - 47147473
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacccttcatct 176  Q
    |||||||| |||||||||||||||||||||| ||||  ||||| ||||||| |||||||||  |||||| ||||  |||||| || |||||    
T  47147563 aactcattaatctctagatctttcttaatagtttcttctatagtttttctaggtcttcctctgcctctagtgatccgactactctccatct 47147473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 88 - 166
Target Start/End: Complemental strand, 49987596 - 49987518
Alignment:
Q  88 ctcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgacta 166  Q
    |||||||||||| |  ||||||||||||| ||||||||||| ||||||| |||||||||  |||||| ||| |||||||    
T  49987596 ctcatttatctccaagtctttcttaatagtttctcttatagtttttctaggtcttcctctgcctctagtgaattgacta 49987518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 231 - 304
Target Start/End: Original strand, 51252701 - 51252772
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaatc 304  Q
    |||||||||||| ||||||||||||||||| ||||| |||| |||  ||||||||||| | |||||||||||||    
T  51252701 taagcctagtttccaccatcttttctactagaggtgctaccccaa--ctctctctaatgtagtcatttctaatc 51252772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 231 - 304
Target Start/End: Complemental strand, 49987470 - 49987397
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaatc 304  Q
    |||||||| ||| |||||||||||||||||||||||  |||   ||||||| |||||| |||||||||||||||    
T  49987470 taagcctattttccaccatcttttctactataggtgtgacccagactctctatctaatgttgtcatttctaatc 49987397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 89 - 174
Target Start/End: Complemental strand, 53517717 - 53517632
Alignment:
Q  89 tcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacccttcat 174  Q
    ||||| |||||||| ||||| || |||| |||||||| || ||||||| |||||||||  |||||| |||| ||||||||||||||    
T  53517717 tcattaatctctagttcttttttgatagtttctcttacagtttttctaagtcttcctctgcctctagtgatctgactacccttcat 53517632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 228 - 304
Target Start/End: Complemental strand, 29398863 - 29398787
Alignment:
Q  228 acataagcctagttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaatc 304  Q
    |||||||| || ||| ||||||||||||||| ||||||| || | ||||||| || ||||||||||||||| |||||    
T  29398863 acataagcatattttccaccatcttttctaccataggtgctatcgcaactctttccctaatattgtcatttgtaatc 29398787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 231 - 303
Target Start/End: Original strand, 36557269 - 36557341
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaat 303  Q
    |||| |||||||  ||||||||||||||||| |||| | || |||||||||||| ||||| ||||||||||||    
T  36557269 taagtctagtttctaccatcttttctactatgggtgctgccccaactctctctccaatatcgtcatttctaat 36557341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 97 - 153
Target Start/End: Original strand, 45204942 - 45204998
Alignment:
Q  97 ctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctct 153  Q
    ||||| ||||||| |||||| ||||||||||| ||||||| ||||||||||||||||    
T  45204942 ctctaaatctttcctaatagtttctcttatagtttttctaggtcttcctccacctct 45204998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 236 - 303
Target Start/End: Original strand, 6478913 - 6478980
Alignment:
Q  236 ctagttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaat 303  Q
    |||||||| ||||||||||||||||||||||  ||| |||||||| ||||||| |  |||||||||||    
T  6478913 ctagtttttaccatcttttctactataggtgccaccccaactctcactctaatgtcatcatttctaat 6478980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 73 - 128
Target Start/End: Complemental strand, 6843818 - 6843763
Alignment:
Q  73 catatttttatgaaactcatttatctctagatctttcttaatagattctcttatag 128  Q
    ||||||| ||| ||||||||| ||||||||||||||||||||||  ||||||||||    
T  6843818 catatttctatcaaactcattaatctctagatctttcttaatagtctctcttatag 6843763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 86 - 141
Target Start/End: Complemental strand, 10209226 - 10209171
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttataggttttctatgtct 141  Q
    |||||||| ||||||||||| |||||||||| ||||||||||| ||||||| ||||    
T  10209226 aactcattaatctctagatccttcttaatagtttctcttatagtttttctaggtct 10209171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 95 - 182
Target Start/End: Original strand, 25967362 - 25967449
Alignment:
Q  95 atctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacccttcatcttatcta 182  Q
    |||||||||||||| ||||||| ||||||||||| | ||| | |||||||||   ||||| |||||| |||| ||||||||| |||||    
T  25967362 atctctagatcttttttaatagtttctcttatagttattcaaagtcttcctctgtctctagtgatttaactatccttcatctgatcta 25967449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 302
Target Start/End: Complemental strand, 43562725 - 43562658
Alignment:
Q  235 cctagttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaa 302  Q
    |||||||||||| || ||||||||| |||||| |||||| || || ||||||| ||||||||||||||    
T  43562725 cctagttttcacaatattttctactttaggtgctacctcgacactttctctaagattgtcatttctaa 43562658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 100 - 167
Target Start/End: Original strand, 44719470 - 44719537
Alignment:
Q  100 tagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactac 167  Q
    ||||||||||||||||| |||| |||||  ||||||| |||||||||  ||||||||||||| |||||    
T  44719470 tagatctttcttaatagtttcttttatattttttctaggtcttcctcagcctctaatgatttaactac 44719537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 124 - 222
Target Start/End: Complemental strand, 11389876 - 11389778
Alignment:
Q  124 tataggttttctatgtcttcctccacctctaatgatttgactacccttcatcttatctagtcgccatgctacagaatgcacaagttttctctccacgtg 222  Q
    ||||| ||||||| ||||||||| ||||||| ||||||||||||  | ||||||||||| || || | |||||||||  ||||   |||||||||||||    
T  11389876 tatagtttttctacgtcttcctctacctctagtgatttgactactttccatcttatctactctccttactacagaatctacaaagattctctccacgtg 11389778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 72 - 146
Target Start/End: Complemental strand, 20999204 - 20999130
Alignment:
Q  72 ccatatttttatgaaactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctc 146  Q
    |||||| |||||  |||||||| | |||||||||||||||||||| || | |||||| ||||||| |||||||||    
T  20999204 ccatatatttattcaactcattaaactctagatctttcttaatagtttatattatagtttttctaggtcttcctc 20999130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 231 - 285
Target Start/End: Complemental strand, 41192878 - 41192824
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaactctctctct 285  Q
    |||| ||||||| |||||||||||||||| |||||| |||| |||||||||||||    
T  41192878 taagtctagtttccaccatcttttctactgtaggtgctaccccaactctctctct 41192824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 167
Target Start/End: Original strand, 42293340 - 42293438
Alignment:
Q  69 ataccatatttttatgaaactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactac 167  Q
    ||||||||| | |||  |||||||| || ||||||||||||||||||| ||||||||||| |||| ||  || ||||   |||||| ||||||||||||    
T  42293340 ataccatatgtctatctaactcattaatttctagatctttcttaatagtttctcttatagtttttttagttcatcctttgcctctagtgatttgactac 42293438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 160
Target Start/End: Original strand, 45569101 - 45569175
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatt 160  Q
    |||||||| |||||||||| ||||||||||| ||||||||||   |||||| |||||||||  |||||| |||||    
T  45569101 aactcattgatctctagatttttcttaatagtttctcttataatgtttctaggtcttcctctgcctctagtgatt 45569175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 170
Target Start/End: Complemental strand, 47372858 - 47372757
Alignment:
Q  69 ataccatatttttatgaaactcatttatctctagatctttcttaatagattctcttataggttttct-atgtcttcctccacctctaatgatttgactac 167  Q
    ||||||||||| |||  |||||||| |||||| ||||||| ||| ||| |||||||||| ||||||| | |||| ||||  |||||| ||||||||||||    
T  47372858 ataccatatttctatccaactcattaatctctggatctttattagtagtttctcttata-gttttctcaagtctacctctgcctctagtgatttgactac 47372760  T
Q  168 cct 170  Q
    |||    
T  47372759 cct 47372757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 231 - 305
Target Start/End: Original strand, 48174333 - 48174407
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaatca 305  Q
    |||||||| |||  |||| ||||||||||||||||| |||| | ||||||||||||||  ||||||| |||||||    
T  48174333 taagcctattttctaccaacttttctactataggtgttacccccactctctctctaatggtgtcattcctaatca 48174407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 86 - 167
Target Start/End: Original strand, 934523 - 934603
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactac 167  Q
    |||||||| ||||||||| |||||||||||| |||||| |||| ||||||| |||||||||  |||||| || |||| ||||    
T  934523 aactcattaatctctagaactttcttaatagtttctctaatagtttttcta-gtcttcctctgcctctagtgttttgcctac 934603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 71 - 216
Target Start/End: Complemental strand, 2589277 - 2589132
Alignment:
Q  71 accatatttttatgaaactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactaccct 170  Q
    |||||||||| ||  |||||||| |||||||||||  |||| |||| |||||||||   ||||||| ||| | ||| ||||||| | |||| ||| ||||    
T  2589277 accatattttcatccaactcattaatctctagatccatcttgatagtttctcttatgctttttctaggtcgtgctctacctctagtaatttaactcccct 2589178  T
Q  171 tcatcttatctagtcgccatgctacagaatgcacaagttttctctc 216  Q
     ||| | ||||| || ||   ||||||||| |||||||||||||||    
T  2589177 ccatttgatctactctcctaactacagaatccacaagttttctctc 2589132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 231 - 304
Target Start/End: Complemental strand, 12494792 - 12494719
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaatc 304  Q
    |||||||| |||  |||| ||||||||||||||||| |||| | ||||||||||||||  ||||||| ||||||    
T  12494792 taagcctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtcattcctaatc 12494719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 86 - 182
Target Start/End: Original strand, 21879245 - 21879341
Alignment:
Q  86 aactcatttatctctagatctttctt-aatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacccttcatcttatcta 182  Q
    |||||||| ||||||||||||||||| ||||| |||||||||| |||||    ||||||||| ||||||  |||||| |||||||| ||||| |||||    
T  21879245 aactcattcatctctagatctttcttgaatagtttctcttata-gttttacgggtcttcctcgacctctggtgatttcactaccctccatctaatcta 21879341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 81 - 170
Target Start/End: Complemental strand, 30853538 - 30853449
Alignment:
Q  81 tatgaaactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactaccct 170  Q
    |||| |||||||| |||| ||||| |||| |||||| ||||||||||| ||||||| |||| |||   |||||  |||||||||||||||    
T  30853538 tatgcaactcattaatctttagatttttcataatagtttctcttatagtttttctaagtctccctttgcctcttgtgatttgactaccct 30853449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 231 - 304
Target Start/End: Original strand, 31960054 - 31960127
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaatc 304  Q
    |||||||| |||  |||| ||||||||||||||||| |||| | ||||||||||||||  ||||||| ||||||    
T  31960054 taagcctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtcattcctaatc 31960127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 231 - 304
Target Start/End: Original strand, 38570987 - 38571060
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaatc 304  Q
    |||||||||||| ||| ||||||| ||||||||||| | || || ||||||||| ||| |||||||||| ||||    
T  38570987 taagcctagtttccactatcttttgtactataggtgcttccccagctctctctcaaatgttgtcatttccaatc 38571060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 86 - 170
Target Start/End: Original strand, 42285795 - 42285877
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactaccct 170  Q
    |||||||||||||||||||| ||| ||||||  | |||||||| ||||||| |||| || ||||||||| |||| ||||| ||||    
T  42285795 aactcatttatctctagatccttcctaatag--tttcttatagcttttctaggtctacccccacctctagtgatctgactcccct 42285877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 69 - 146
Target Start/End: Complemental strand, 43562894 - 43562817
Alignment:
Q  69 ataccatatttttatgaaactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctc 146  Q
    ||||||||||||||  |||  |||| ||||||| |||||| ||||||| ||| |||||||||||||| | ||||||||    
T  43562894 ataccatatttttaccaaatgcattcatctctaaatcttttttaataggttcccttataggttttctttctcttcctc 43562817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 107 - 180
Target Start/End: Original strand, 51009224 - 51009297
Alignment:
Q  107 ttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacccttcatcttatc 180  Q
    |||||||||| ||| |||| || ||||||  |||||||||||| |||| |||||| |||||||| |||||||||    
T  51009224 ttcttaatagtttcccttaaagtttttctcggtcttcctccacgtctagtgatttaactaccctccatcttatc 51009297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 231 - 304
Target Start/End: Original strand, 52569755 - 52569828
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaatc 304  Q
    |||||||| |||  |||| ||||||||||||||||| |||| | ||||||||||||||  ||||||| ||||||    
T  52569755 taagcctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtcattcctaatc 52569828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 125
Target Start/End: Original strand, 7544614 - 7544654
Alignment:
Q  85 aaactcatttatctctagatctttcttaatagattctctta 125  Q
    ||||||||| |||||||||||||||||||||| ||||||||    
T  7544614 aaactcattaatctctagatctttcttaatagtttctctta 7544654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 182
Target Start/End: Complemental strand, 28351749 - 28351653
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacccttcatcttatcta 182  Q
    |||||| | ||||||| ||||||| |||||| ||||||||||| ||||||| ||||| ||| ||||||  | || |||||| ||| ||||| |||||    
T  28351749 aactcaataatctctaaatctttcgtaatagtttctcttatagtttttctaggtctttctctacctcttgtaatctgactatcctccatctgatcta 28351653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 288
Target Start/End: Complemental strand, 31339694 - 31339522
Alignment:
Q  117 attctcttataggttttctatgtcttcctccacctctaatgatttgactacccttcatcttatctagtcgccatgctacagaatgcacaagttttctctc 216  Q
    |||||| ||||| ||||||| |||||||||  |||||| ||||| |||||| |||||| | ||||| |  || | ||||| |||  |||||| |||||||    
T  31339694 attctcatatagtttttctaggtcttcctctgcctctagtgatt-gactactcttcatttgatctactatccttactacataatctacaagtcttctctc 31339596  T
Q  217 cacgtgctcaaaca---taagcctagttttcaccatcttttctactataggtgatacctcaactctctctctaat 288  Q
     || |||||||||    ||||| ||||||  ||||| |||||||| ||||||  |||| ||||||||||||||||    
T  31339595 tacatgctcaaaccacctaagcttagtttcgaccat-ttttctaccataggttctaccccaactctctctctaat 31339522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 231 - 304
Target Start/End: Original strand, 31403257 - 31403333
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaac----tctctctctaatattgtcatttctaatc 304  Q
    |||||||||||| |||||| |||||||||||||||| |||| ||||    ||| |||||||| |||||||||||||||    
T  31403257 taagcctagtttccaccat-ttttctactataggtgctaccccaactctatctgtctctaatgttgtcatttctaatc 31403333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 153
Target Start/End: Complemental strand, 35690462 - 35690394
Alignment:
Q  85 aaactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctct 153  Q
    ||||||||| | ||||| || |||| |||||| ||||||||||| ||||||| ||||||||| ||||||    
T  35690462 aaactcattaacctctaaatttttcgtaatagtttctcttatagtttttctaggtcttcctctacctct 35690394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 142
Target Start/End: Complemental strand, 44385020 - 44384965
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttataggttttctatgtctt 142  Q
    |||| ||| |||||||||||||||||||||| ||||||||||| || ||||||||||    
T  44385020 aacttattaatctctagatctttcttaatag-ttctcttatagcttgtctatgtctt 44384965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 178
Target Start/End: Complemental strand, 44861015 - 44860931
Alignment:
Q  94 tatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacccttcatctta 178  Q
    |||||||||||||||| |||||| ||| ||||||| ||||| | ||||||||   |||||| || ||||||||| || |||||||    
T  44861015 tatctctagatctttcataatagtttcccttatagtttttcaaggtcttcctttgcctctagtgttttgactacgctccatctta 44860931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 170
Target Start/End: Original strand, 50967120 - 50967203
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactaccct 170  Q
    |||||||| |||||||| ||||||||||||| ||||||| ||| |||| ||  ||| ||||| |||||||| || ||||||||||    
T  50967120 aactcattgatctctag-tctttcttaatagtttctcttgtagtttttttagttctccctccgcctctaataatctgactaccct 50967203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 96 - 160
Target Start/End: Original strand, 51252555 - 51252619
Alignment:
Q  96 tctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatt 160  Q
    ||||||| ||||||||||||| |||| ||| || |||||||| |||||||| ||||||| |||||    
T  51252555 tctctaggtctttcttaatagtttcttttacagtttttctatctcttcctctacctctagtgatt 51252619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 260 - 303
Target Start/End: Original strand, 934704 - 934747
Alignment:
Q  260 ataggtgatacctcaactctctctctaatattgtcatttctaat 303  Q
    |||||||||||| |||| |||||||||||||| |||||||||||    
T  934704 ataggtgataccccaaccctctctctaatattatcatttctaat 934747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 100 - 143
Target Start/End: Original strand, 8599047 - 8599090
Alignment:
Q  100 tagatctttcttaatagattctcttataggttttctatgtcttc 143  Q
    ||||||||||||||||| ||||||||||| ||||||| ||||||    
T  8599047 tagatctttcttaatagtttctcttatagtttttctaggtcttc 8599090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 95 - 178
Target Start/End: Complemental strand, 18966786 - 18966703
Alignment:
Q  95 atctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacccttcatctta 178  Q
    |||| ||||||||||||||||| ||||||||||| | || || |||||| || ||||||| |||||  |||| ||| |||||||    
T  18966786 atctgtagatctttcttaatagtttctcttatagttgttttaggtcttcttctacctctagtgattgaactatcctccatctta 18966703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 235 - 290
Target Start/End: Original strand, 30621448 - 30621503
Alignment:
Q  235 cctagttttcaccatcttttctactataggtgatacctcaactctctctctaatat 290  Q
    |||| ||| ||||||||||||||||||| ||| |||| |||||| |||||||||||    
T  30621448 cctattttccaccatcttttctactataagtgctaccccaactccctctctaatat 30621503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 69 - 160
Target Start/End: Original strand, 31403109 - 31403200
Alignment:
Q  69 ataccatatttttatgaaactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatt 160  Q
    |||||| |||| |||  |||| ||| ||||||||||||||| |||||| || |||||||| || ||||  ||||||||| |||||| |||||    
T  31403109 ataccacatttctatccaactaattaatctctagatctttcataatagtttttcttatagtttctctagatcttcctccgcctctagtgatt 31403200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 245 - 304
Target Start/End: Original strand, 33191102 - 33191161
Alignment:
Q  245 accatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaatc 304  Q
    |||| ||||||||||||||||| |||| | ||||||||||||||  ||||||| ||||||    
T  33191102 accaacttttctactataggtgctacccccactctctctctaatggtgtcattcctaatc 33191161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 69 - 128
Target Start/End: Original strand, 37042739 - 37042798
Alignment:
Q  69 ataccatatttttatgaaactcatttatctctagatctttcttaatagattctcttatag 128  Q
    ||||| ||||| |||  |||||| | |||||||||||||||||||||| |||||||||||    
T  37042739 ataccgtatttctatccaactcaataatctctagatctttcttaatagtttctcttatag 37042798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 297
Target Start/End: Complemental strand, 436271 - 436205
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtcatt 297  Q
    |||||||| |||  |||| ||||||||||||||||| |||| | ||||||||||||||  |||||||    
T  436271 taagcctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtcatt 436205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 167
Target Start/End: Original strand, 8459110 - 8459208
Alignment:
Q  69 ataccatatttttatgaaactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactac 167  Q
    ||||||||| || ||  ||||| || |||||||||| ||||||||||| || |||| ||| |||| || |||||||||  ||| || ||||||||||||    
T  8459110 ataccatatattcattcaactctttaatctctagatttttcttaatagtttatcttttagtttttttaggtcttcctctgcctttagtgatttgactac 8459208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 128
Target Start/End: Original strand, 26024942 - 26024984
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttatag 128  Q
    |||||||| |||||||||||||||||||||| ||||| |||||    
T  26024942 aactcattaatctctagatctttcttaatagtttctcatatag 26024984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 285
Target Start/End: Complemental strand, 31459072 - 31459018
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaactctctctct 285  Q
    |||||||| |||  |||||||||||||||||||||| |||||| ||||| |||||    
T  31459072 taagcctattttctaccatcttttctactataggtgctacctcgactctgtctct 31459018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 297
Target Start/End: Complemental strand, 33227251 - 33227185
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtcatt 297  Q
    |||||||| |||  |||| ||||||||||||||||| |||| | ||||||||||||||  |||||||    
T  33227251 taagcctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtcatt 33227185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 285
Target Start/End: Original strand, 35555887 - 35555941
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaactctctctct 285  Q
    |||| |||||||  |||||||||||||||||||||| ||||  ||||||||||||    
T  35555887 taagtctagtttctaccatcttttctactataggtgctacccgaactctctctct 35555941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 237 - 304
Target Start/End: Original strand, 43070014 - 43070077
Alignment:
Q  237 tagttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaatc 304  Q
    |||||| ||||||| ||||||||||||| | ||||||||    ||||||||| |||||||||||||||    
T  43070014 tagtttccaccatcatttctactataggcgctacctcaa----ctctctaatgttgtcatttctaatc 43070077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 71 - 165
Target Start/End: Complemental strand, 53540495 - 53540401
Alignment:
Q  71 accatatttttatgaaactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgact 165  Q
    ||||||||||| |  |||||||| ||||| |  |||||| |||||| || |||||||| ||||||| |||||||||  |||||| |||| |||||    
T  53540495 accatatttttgtccaactcattaatctccaagtctttcctaatagtttatcttatagtttttctaggtcttcctctgcctctagtgatctgact 53540401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 297
Target Start/End: Complemental strand, 53707836 - 53707770
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtcatt 297  Q
    |||||||| |||  |||| ||||||||||||||||| |||||| ||||||| ||||||  |||||||    
T  53707836 taagcctattttctaccaacttttctactataggtgctacctccactctctttctaatggtgtcatt 53707770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 152
Target Start/End: Original strand, 55809082 - 55809148
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctc 152  Q
    |||||||| | ||||| ||||||| ||| || ||||||||||| ||||||| ||||||||| |||||    
T  55809082 aactcattaacctctaaatctttcctaacagtttctcttatagtttttctaggtcttcctctacctc 55809148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 174
Target Start/End: Original strand, 4136839 - 4136909
Alignment:
Q  102 gatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacccttcat 174  Q
    ||||||||||||||| ||||||||  | ||||||||||  ||||||   |||| |||||||||||||||||||    
T  4136839 gatctttcttaatagtttctctta--gtttttctatgttatcctccgtgtctagtgatttgactacccttcat 4136909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 196
Target Start/End: Original strand, 13805374 - 13805467
Alignment:
Q  103 atctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacccttcatcttatctagtcgccatgctaca 196  Q
    ||||||||| |||| ||||||||||| ||||||| || ||||||  |||||| |||| |||| | ||| ||| | |||||||| || |||||||    
T  13805374 atctttcttcatagtttctcttatagtttttctaggttttcctctgcctctagtgatctgacaatcctccatgtgatctagtctccttgctaca 13805467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 304
Target Start/End: Complemental strand, 20999034 - 20998981
Alignment:
Q  251 ttttctactataggtgatacctcaactctctctctaatattgtcatttctaatc 304  Q
    ||||||| |||||||| |||| |||||| || ||||||||| ||||||||||||    
T  20999034 ttttctagtataggtgttaccccaactccctatctaatattatcatttctaatc 20998981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 125
Target Start/End: Complemental strand, 41192268 - 41192211
Alignment:
Q  69 ataccatatttttatgaaactcatttatctctagatctttcttaatag-attctctta 125  Q
    ||||||||||| |||  |||||||| ||||||||||||||||| |||| |||||||||    
T  41192268 ataccatatttctatccaactcattaatctctagatctttctttatagcattctctta 41192211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 114
Target Start/End: Original strand, 44047446 - 44047491
Alignment:
Q  69 ataccatatttttatgaaactcatttatctctagatctttcttaat 114  Q
    |||||||||| ||||  |||||||| ||||||||||||||||||||    
T  44047446 ataccatattattatccaactcattaatctctagatctttcttaat 44047491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 303
Target Start/End: Original strand, 25257716 - 25257891
Alignment:
Q  129 gttttctatgtcttcctccacctctaatgatttgactacccttcatcttatctagtcgccatgctacagaatgcacaagttttctctccacgtgctcaaa 228  Q
    ||||| || ||||||| | ||||||| |||||||  | |||| ||||| ||||| || || | | |||| || |||| || ||||||| || ||||||||    
T  25257716 gttttttaggtcttcccctacctctagtgatttgtgtcccctccatctgatctactctccttacaacagcattcacaggtcttctctctacatgctcaaa 25257815  T
Q  229 ca---taagcctagttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaat 303  Q
    |    |||| |||| ||  |||||||||| || | |||||| ||||||||  ||||||||||| ||||||||||||||    
T  25257816 ccacctaagtctagcttctaccatcttttatattgtaggtgttacctcaa--ctctctctaatgttgtcatttctaat 25257891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 122
Target Start/End: Original strand, 26025011 - 26025047
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctc 122  Q
    |||||||| |||||||||||||||||||||| |||||    
T  26025011 aactcattaatctctagatctttcttaatagtttctc 26025047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 231 - 283
Target Start/End: Complemental strand, 28236225 - 28236173
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaactctctct 283  Q
    |||||||| ||| ||||| ||||||||||||||||| |||| | |||||||||    
T  28236225 taagcctattttccaccaacttttctactataggtgctacccccactctctct 28236173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 40268363 - 40268414
Alignment:
Q  94 tatctctagatctttcttaatagattctcttataggttttctatgtcttcctc 146  Q
    ||||||||||| ||||||||||| |||||||||| |||||||| | |||||||    
T  40268363 tatctctagatttttcttaatagtttctcttata-gttttctaggccttcctc 40268414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 102 - 182
Target Start/End: Complemental strand, 42566413 - 42566333
Alignment:
Q  102 gatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacccttcatcttatcta 182  Q
    ||||||||||||||| ||||||| ||| |||| || || |||||| ||||||| |||| |||||  ||| ||||| |||||    
T  42566413 gatctttcttaatagtttctcttgtagtttttttaggtattcctcaacctctagtgatatgactctcctacatctaatcta 42566333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 231 - 283
Target Start/End: Complemental strand, 50662429 - 50662377
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaactctctct 283  Q
    |||||||| ||| ||||||||||||||||||||||| | ||  ||||||||||    
T  50662429 taagcctactttccaccatcttttctactataggtgttgcccaaactctctct 50662377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 97 - 153
Target Start/End: Complemental strand, 51421909 - 51421853
Alignment:
Q  97 ctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctct 153  Q
    ||||| ||||||| |||||| ||||||||||| |||||||  |||||||| ||||||    
T  51421909 ctctaaatctttcctaatagtttctcttatagtttttctaaatcttcctctacctct 51421853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 182
Target Start/End: Complemental strand, 55028974 - 55028910
Alignment:
Q  118 ttctcttataggttttctatgtcttcctccacctctaatgatttgactacccttcatcttatcta 182  Q
    ||||||||||| |||||||  |||||||   |||||| ||||||||||||| | |||||||||||    
T  55028974 ttctcttatagtttttctaactcttcctatgcctctagtgatttgactaccatgcatcttatcta 55028910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 65; Significance: 1e-28; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 103 - 310
Target Start/End: Complemental strand, 6859554 - 6859344
Alignment:
Q  103 atctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacccttcatcttatctagtcgccatgctacagaatgc 202  Q
    ||||||| |||||| ||||||||||| ||||||| |||||||||  |||||| || |||||||| ||| ||||| || || || || | ||||||||| |    
T  6859554 atctttcctaatagtttctcttatagtttttctaggtcttcctcttcctctagtggtttgactatcctccatctaatttattccccttactacagaatcc 6859455  T
Q  203 acaagttttctctccacgtgctcaa---acataagcctagttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtcatttc 299  Q
    |||||| ||||||| |||||  |||   || || ||||  ||| ||||||||| |  |||||||||| |||| ||||||||| |||||||||||||||||    
T  6859454 acaagtcttctctctacgtgtccaaaccacctatgcctgttttccaccatcttcttcactataggtgctaccccaactctctgtctaatattgtcatttc 6859355  T
Q  300 taatcaaatcc 310  Q
    |||||| ||||    
T  6859354 taatcatatcc 6859344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 71 - 304
Target Start/End: Complemental strand, 14749512 - 14749276
Alignment:
Q  71 accatatttttatgaaactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactaccct 170  Q
    ||||||||| |||  ||||| || ||||||||||| ||||| |||| ||||||||||| ||||||| |||||||||  ||| || |||||||||| ||||    
T  14749512 accatatttctatccaactcgttaatctctagatccttcttgatagtttctcttatagtttttctaggtcttcctctgcctttagtgatttgactcccct 14749413  T
Q  171 tcatcttatctagtcgccatgctacagaatgcacaagttttctctccacgtgctcaaac---ataagcctagttttcaccatcttttctactataggtga 267  Q
     ||||| ||| | || || | | ||||||| |||| || ||||||| || ||  |||||    |||| |||||||  ||||  ||||||||||||||||     
T  14749412 ccatctgatcgactctccttacaacagaatccacaggtcttctctctacatgtccaaaccatctaagtctagtttctaccaatttttctactataggtgc 14749313  T
Q  268 tacctcaactctctctctaatattgtcatttctaatc 304  Q
    |||  |||||||||||||||| || ||||||||||||    
T  14749312 tacaccaactctctctctaatgttttcatttctaatc 14749276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 86 - 303
Target Start/End: Original strand, 7359352 - 7359571
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacccttcatcttatctagtc 185  Q
    |||| ||| |||||||||| ||||| ||||| ||||||||| | ||||||| |  ||||||  |||||| |||| |||||| ||| ||||| ||||| ||    
T  7359352 aacttattaatctctagatttttctaaatagtttctcttatggtttttctaggctttcctctgcctctagtgatatgactatcctccatctgatctactc 7359451  T
Q  186 gccatgctacagaatgcacaagttttctctccacgtgctcaaaca--taagcctagttttcaccatcttttctactataggtgatacctcaactctctct 283  Q
     || | |||||||||  |||  | ||||||| || |||  || ||  ||| |||| ||| |||||| |||||||||||||||| ||||| ||||||||||    
T  7359452 tccttactacagaatctacatatcttctctctacatgccaaaccacctaaacctattttccaccatattttctactataggtgttacctgaactctctct 7359551  T
Q  284 ctaatattgtcatttctaat 303  Q
    |||| |||||||||||||||    
T  7359552 ctaacattgtcatttctaat 7359571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 69 - 182
Target Start/End: Original strand, 12576935 - 12577048
Alignment:
Q  69 ataccatatttttatgaaactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacc 168  Q
    ||||||||||| |||  |||||||| |||||||||||||||||||||| || |||| ||| ||||||| |||||||||  |||||| ||||  |||||||    
T  12576935 ataccatatttctattcaactcattaatctctagatctttcttaatagtttatcttgtagtttttctaggtcttcctctgcctctagtgataggactacc 12577034  T
Q  169 cttcatcttatcta 182  Q
    || ||||| |||||    
T  12577035 ctccatctgatcta 12577048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 86 - 305
Target Start/End: Complemental strand, 6889183 - 6888961
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacccttcatcttatctagtc 185  Q
    |||| ||| ||||||| ||||||| |||||| ||||||||||| ||||||| | |||||||  |||| | || |||||||| ||| ||||| || || |     
T  6889183 aactaattaatctctaaatctttcctaatagtttctcttatagtttttctaggccttcctcttcctcaagtggtttgactatcctccatctaatttattg 6889084  T
Q  186 gccatgctacagaatgcacaagttttctctccacgtgctcaaaca---taagcctagttttcaccatcttttctactataggtgatacctcaactctctc 282  Q
     || | | ||| ||| ||||||| ||||||| || ||  |||||    |||||||| ||| ||||||||||||  ||||| ||| |||| ||||||| ||    
T  6889083 tccttaccacataatccacaagtcttctctctacatgtccaaaccacttaagcctattttccaccatcttttcctctatacgtgctaccccaactctttc 6888984  T
Q  283 tctaatattgtcatttctaatca 305  Q
    | |||||||||||||||||||||    
T  6888983 tgtaatattgtcatttctaatca 6888961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 86 - 303
Target Start/End: Complemental strand, 2713134 - 2712918
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacccttcatcttatctagtc 185  Q
    |||||||| ||||||||||| |||||||||| ||||||||||| ||||||| ||||||| |   ||||| ||||||||||  ||| ||||| ||||| ||    
T  2713134 aactcattcatctctagatccttcttaatagtttctcttatagtttttctaggtcttcccctgactctagtgatttgactctcctccatctgatctactc 2713035  T
Q  186 gccatgctacagaatgcacaagttttctctccacgtgctcaaaca---taagcctagttttcaccatcttttctactataggtgatacctcaactctctc 282  Q
     || |  |||||||| |||| || ||||||| || ||| |||||    |||| ||||| |  ||||||||||  |||||||||| |||| |||||||||     
T  2713034 tccttcatacagaatccacaggtcttctctctacatgcccaaaccacctaagtctagtctctaccatcttttagactataggtgctaccccaactctctg 2712935  T
Q  283 tctaatattgtcatttctaat 303  Q
        || ||||||||||||||    
T  2712934 ----atgttgtcatttctaat 2712918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 73 - 176
Target Start/End: Complemental strand, 18698997 - 18698894
Alignment:
Q  73 catatttttatgaaactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacccttc 172  Q
    ||||||| |||  |||||| | ||||||||||||||||| ||| |||||||||||| ||||||| || ||||||  |||||| |||||||||||| || |    
T  18698997 catatttctatccaactcactaatctctagatctttcttgatacattctcttatagtttttctaggtattcctctgcctctagtgatttgactactctcc 18698898  T
Q  173 atct 176  Q
    ||||    
T  18698897 atct 18698894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 86 - 304
Target Start/End: Complemental strand, 42199476 - 42199257
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacccttcatcttatctagtc 185  Q
    |||||||| || ||||||||||||| ||||| || ||| |||| ||||||| ||||| |||  || ||| |||||||||||| || ||| | ||||| ||    
T  42199476 aactcattaatatctagatctttctaaatagtttgtctaatagtttttctaggtctttctctccccctagtgatttgactactctccatgtgatctactc 42199377  T
Q  186 gccatgctacagaatgcacaagttttctctccacgtgctcaa---acataagcctagttttcaccatcttttctactataggtgatacctcaactctctc 282  Q
     || | |||||||||  ||| || ||||||| || ||| |||   || |||| ||||||| |||||||||||||||  || ||| |||| ||| ||||||    
T  42199376 tccttactacagaatctacatgtcttctctctacatgcccaaaccacctaagtctagtttccaccatcttttctac--taagtgctaccccaattctctc 42199279  T
Q  283 tctaatattgtcatttctaatc 304  Q
    | |||  | |||||||||||||    
T  42199278 tgtaacgtcgtcatttctaatc 42199257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 86 - 303
Target Start/End: Original strand, 10082837 - 10083051
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacccttcatcttatctagtc 185  Q
    |||||||| ||||||||||| || ||| ||| ||||||||||| ||||||| ||||| | | | ||||  |||||||||| ||||       ||||| ||    
T  10082837 aactcattaatctctagatccttgttactagtttctcttatagtttttctaggtcttaccctatctctggtgatttgactcccctc------atctactc 10082930  T
Q  186 gccatgctacagaatgcacaagttttctctccacgtgctcaaaca---taagcctagttttcaccatcttttctactataggtgatacctcaactctctc 282  Q
     |  | ||||||||| ||||||| ||||||| || |||  ||||    |||| |||||||  ||||||||||||||||||||||||||| |||  |||||    
T  10082931 tctttactacagaatccacaagtcttctctctacatgccgaaaccacttaagtctagtttctaccatcttttctactataggtgataccccaatgctctc 10083030  T
Q  283 tctaatattgtcatttctaat 303  Q
     ||||| || |||||||||||    
T  10083031 cctaatgttctcatttctaat 10083051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 70 - 304
Target Start/End: Complemental strand, 38684686 - 38684449
Alignment:
Q  70 taccatatttttatgaaactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactaccc 169  Q
    |||||||||| |||  |||| ||| ||||||||||||||||||| || ||||||| ||| ||||||| ||||||||  || |||| ||||| || | |||    
T  38684686 taccatatttctatccaactaattaatctctagatctttcttaaaagtttctcttgtagtttttctaggtcttcctttacatctagtgattggaatcccc 38684587  T
Q  170 ttcatcttatctagtcgccatgctacagaatgcacaagttttctctccacgtgctcaaac---ataagcctagttttcaccatcttttctactataggtg 266  Q
    | ||||| || || || || | ||| ||||| |||| || ||||||| || |||| ||||    ||||  |||||| |||||||| || |||||||||||    
T  38684586 tccatctaatatactctccttactatagaatacacaggtcttctctctacatgctgaaaccatttaagtttagtttccaccatctattatactataggtg 38684487  T
Q  267 atacctcaactctctctctaatattgtcatttctaatc 304  Q
     ||||   |||||||| || || ||  |||||||||||    
T  38684486 ctaccctgactctctcactgatgtttccatttctaatc 38684449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 104 - 301
Target Start/End: Original strand, 15489602 - 15489802
Alignment:
Q  104 tctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacccttcatcttatctagtcgccatgctacagaatgca 203  Q
    ||||||||||||| ||||||||| | ||||||| |||||||||  |||||| |||||  |||| ||| ||||| ||||| || || |  |||| |||  |    
T  15489602 tctttcttaatagtttctcttattgtttttctaggtcttcctctgcctctagtgattcaactatcctccatctaatctactctccttaatacaaaatcta 15489701  T
Q  204 caagttttctctccacgtgctcaaac---ataagcctagttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtcatttct 300  Q
    ||| | ||||||| || ||| |||||    |||||  |||||  |||||||||||||| ||||||  |||| |||||||||||||||| || |||| |||    
T  15489702 caaatcttctctctacatgcccaaaccatctaagctgagtttcaaccatcttttctacaataggtactaccccaactctctctctaatcttatcatgtct 15489801  T
Q  301 a 301  Q
    |    
T  15489802 a 15489802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 86 - 283
Target Start/End: Original strand, 31636012 - 31636212
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacccttcatcttatctagtc 185  Q
    |||||||| ||||||| ||| ||||| |||| |||||| |||| |||||||  |||||| | | ||||| |||||||||| |||  ||||| ||||| ||    
T  31636012 aactcattgatctctatatccttcttgatagtttctctaatagtttttctagatcttcccctatctctagtgatttgactccccaccatctaatctactc 31636111  T
Q  186 gccatgctacagaatgcacaagttttctctccacgtgctcaaaca---taagcctagttttcaccatcttttctactataggtgatacctcaactctctc 282  Q
     || | |||||  || |||  || ||||||| || ||| |||||    |||| |||||||  |||||||||||||||||||||| |||| ||||| ||||    
T  31636112 tccttactacaacatccacgggtcttctctctacatgcccaaaccacctaagtctagtttctaccatcttttctactataggtgctaccccaactttctc 31636211  T
Q  283 t 283  Q
    |    
T  31636212 t 31636212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 86 - 164
Target Start/End: Complemental strand, 33667625 - 33667547
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgac 164  Q
    |||||||| ||||||||||| |||||||||  ||||||||||| ||||||| ||||||| | || |||| |||||||||    
T  33667625 aactcattaatctctagatccttcttaataacttctcttatagtttttctaggtcttcccctacatctagtgatttgac 33667547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 86 - 182
Target Start/End: Original strand, 11002513 - 11002609
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacccttcatcttatcta 182  Q
    |||||||||||||||||||| ||  |||||| || |||||||| ||||||| |||| || | ||||||| |||| ||||| |||| ||||| |||||    
T  11002513 aactcatttatctctagatcgttactaatagtttgtcttatagtttttctaggtctaccccaacctctagtgatctgactcccctacatctgatcta 11002609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 86 - 146
Target Start/End: Complemental strand, 27998631 - 27998571
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctc 146  Q
    |||||||| |||| ||||||||||||| ||| ||||||||||| ||||||| |||||||||    
T  27998631 aactcattaatctgtagatctttcttagtagtttctcttatagtttttctaggtcttcctc 27998571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 231 - 303
Target Start/End: Complemental strand, 14667805 - 14667727
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaactctct------ctctaatattgtcatttctaat 303  Q
    |||| ||| ||| ||||||||||||||||||||||| |||| |||||||||      ||||||||||||||||||||||    
T  14667805 taagtctattttccaccatcttttctactataggtgctaccccaactctctctctctctctaatattgtcatttctaat 14667727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 86 - 145
Target Start/End: Complemental strand, 30588637 - 30588578
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcct 145  Q
    |||||||| ||||||||||||||||||| |  ||||||||||| ||||||| ||||||||    
T  30588637 aactcattcatctctagatctttcttaacaatttctcttatagtttttctaggtcttcct 30588578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 176
Target Start/End: Complemental strand, 7678668 - 7678578
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacccttcatct 176  Q
    |||||||| |||||||||||||||| ||||| ||||||||| | ||| |||  ||||||||  |||||| |||| |||||| ||| |||||    
T  7678668 aactcattaatctctagatctttctaaatagtttctcttatggttttactagatcttcctctgcctctagtgatctgactatcctccatct 7678578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 136
Target Start/End: Complemental strand, 14667961 - 14667911
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttataggttttcta 136  Q
    |||||||| |||||||||||||||||| ||| ||||||||||| |||||||    
T  14667961 aactcattaatctctagatctttcttagtagcttctcttatagtttttcta 14667911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 167
Target Start/End: Complemental strand, 42199600 - 42199502
Alignment:
Q  69 ataccatatttttatgaaactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactac 167  Q
    ||||||||||| |||  |||||||| || ||||||||||||| ||||| || ||| |||| ||||||| ||||| |||  || ||| ||||||||||||    
T  42199600 ataccatatttctatccaactcattaatatctagatctttctaaatagtttgtctaatagtttttctaggtctttctctccccctagtgatttgactac 42199502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 90 - 182
Target Start/End: Complemental strand, 21952541 - 21952451
Alignment:
Q  90 catttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacccttcatcttatcta 182  Q
    |||| ||||||||||| |||| ||||| |||||  |||| ||||||| ||||||| | ||||||| |||||||||| |||| ||||| |||||    
T  21952541 cattaatctctagatccttctcaatagtttctc--atagtttttctaggtcttcccctacctctagtgatttgactcccctccatctgatcta 21952451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 86 - 167
Target Start/End: Original strand, 36123274 - 36123355
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactac 167  Q
    |||||||| ||||||||||| ||||| || | ||| ||||||| ||||||| ||||||||  ||||||| ||||| ||||||    
T  36123274 aactcattaatctctagatccttcttgatggtttcccttatagcttttctaagtcttcctttacctctagtgattcgactac 36123355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 231 - 304
Target Start/End: Complemental strand, 38685009 - 38684936
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaatc 304  Q
    |||||||| |||  |||| ||||||||||||||||| |||| | ||||||||||||||  ||||||| ||||||    
T  38685009 taagcctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtcattcctaatc 38684936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 153
Target Start/End: Complemental strand, 28061 - 28005
Alignment:
Q  97 ctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctct 153  Q
    ||||| ||||||| |||||| ||||||||||| ||||||| ||||||||| ||||||    
T  28061 ctctaaatctttcctaatagtttctcttatagtttttctaggtcttcctcaacctct 28005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 182
Target Start/End: Complemental strand, 1525834 - 1525738
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacccttcatcttatcta 182  Q
    ||||||||||||||| |||| ||| |||||| ||||||| ||| ||||||| |||| || | ||||||| |||| |||||  ||| ||||| |||||    
T  1525834 aactcatttatctctggatccttcctaatagtttctcttgtagtttttctaggtctacccctacctctagtgatctgactctcctccatctgatcta 1525738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 231 - 303
Target Start/End: Original strand, 15588780 - 15588852
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaat 303  Q
    |||||||||||| ||||||||||||| ||||||||  |||| ||||| ||||||| ||  | |||||||||||    
T  15588780 taagcctagtttccaccatcttttcttctataggtactaccccaactttctctcttatgctatcatttctaat 15588852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 95 - 151
Target Start/End: Complemental strand, 29922465 - 29922409
Alignment:
Q  95 atctctagatctttcttaatagattctcttataggttttctatgtcttcctccacct 151  Q
    ||||||| |||||||||||||| ||||||||||| |||||||  |||||||| ||||    
T  29922465 atctctaaatctttcttaatagtttctcttatagtttttctagatcttcctctacct 29922409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 231 - 302
Target Start/End: Complemental strand, 32516598 - 32516529
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaa 302  Q
    |||||||| ||| ||||||||||||||||||| ||| |||  |||||||  ||||||| |||||||||||||    
T  32516598 taagcctattttccaccatcttttctactataagtgttactccaactct--ctctaatgttgtcatttctaa 32516529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 245 - 304
Target Start/End: Original strand, 2075728 - 2075787
Alignment:
Q  245 accatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaatc 304  Q
    |||| |||||||||| |||||| |||| | |||||||||||||| |||||||| ||||||    
T  2075728 accaacttttctactgtaggtgttacccccactctctctctaatgttgtcattcctaatc 2075787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 86 - 141
Target Start/End: Original strand, 15369889 - 15369944
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttataggttttctatgtct 141  Q
    ||||||||||||| ||||| ||||||||||| ||||||||||  ||||||| ||||    
T  15369889 aactcatttatctttagatttttcttaatagtttctcttatactttttctaggtct 15369944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 251 - 302
Target Start/End: Original strand, 15986985 - 15987036
Alignment:
Q  251 ttttctactataggtgatacctcaactctctctctaatattgtcatttctaa 302  Q
    ||||||||||||| || |||| ||||| ||||||||||||| ||||||||||    
T  15986985 ttttctactatagatgctaccccaactttctctctaatattttcatttctaa 15987036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 231 - 266
Target Start/End: Complemental strand, 43475282 - 43475247
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtg 266  Q
    |||||||||||| |||||||||||||||||||||||    
T  43475282 taagcctagtttccaccatcttttctactataggtg 43475247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 297
Target Start/End: Original strand, 219693 - 219759
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtcatt 297  Q
    |||||| ||||| ||||| |||||| || ||||||| |||| |||||||||||| ||| ||||||||    
T  219693 taagccaagtttccaccaccttttcaacgataggtgctaccccaactctctctccaatgttgtcatt 219759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 303
Target Start/End: Original strand, 418242 - 418297
Alignment:
Q  246 ccatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaat 303  Q
    ||||||||||||| ||||||| |||| |||  ||||||||||| ||||||||||||||    
T  418242 ccatcttttctaccataggtgctaccccaa--ctctctctaatgttgtcatttctaat 418297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 85 - 123
Target Start/End: Complemental strand, 1174680 - 1174642
Alignment:
Q  85 aaactcatttatctctagatctttcttaatagattctct 123  Q
    ||||||||| ||||||||||| |||||||||||||||||    
T  1174680 aaactcattaatctctagatccttcttaatagattctct 1174642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 167
Target Start/End: Original strand, 3775162 - 3775240
Alignment:
Q  89 tcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactac 167  Q
    ||||| ||| |||||  ||||||||||| || |||||||| ||||||| |||||| ||  |||||| ||||||||||||    
T  3775162 tcattaatccctagacttttcttaatagtttatcttatagtttttctaggtcttcttctgcctctagtgatttgactac 3775240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 176
Target Start/End: Original strand, 9917542 - 9917632
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacccttcatct 176  Q
    |||||||| ||||||| |||||||| ||||| |||||| |||| ||||||| ||| |||||   ||||  ||||||||||| ||| |||||    
T  9917542 aactcattgatctctatatctttctaaatagtttctctaatagtttttctaggtcatcctctgtctcttgtgatttgactatcctccatct 9917632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 297
Target Start/End: Complemental strand, 24178552 - 24178486
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtcatt 297  Q
    |||||||| |||  |||| ||||||||||||||||| |||| | ||||||||||||||  |||||||    
T  24178552 taagcctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtcatt 24178486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 285
Target Start/End: Complemental strand, 79542 - 79501
Alignment:
Q  244 caccatcttttctactataggtgatacctcaactctctctct 285  Q
    ||||||||||||||||||||||  |||| |||||||||||||    
T  79542 caccatcttttctactataggtactaccccaactctctctct 79501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 304
Target Start/End: Complemental strand, 1275306 - 1275234
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaatc 304  Q
    |||||||| |||  |||| ||||||||||||||||| |||| | ||||||||||||||  ||||||| ||||||    
T  1275306 taagcctattttctaccaacttttctactataggtgctacc-ccactctctctctaatggtgtcattcctaatc 1275234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 304
Target Start/End: Complemental strand, 4496426 - 4496353
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaatc 304  Q
    |||||||| |||  |||| ||||||||||||||||| |||| | |||||||||||||   ||||||| ||||||    
T  4496426 taagcctattttctaccagcttttctactataggtgctacccccactctctctctaaaggtgtcattcctaatc 4496353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 285
Target Start/End: Complemental strand, 5305747 - 5305714
Alignment:
Q  252 tttctactataggtgatacctcaactctctctct 285  Q
    ||||||||||||||| ||||||||||||||||||    
T  5305747 tttctactataggtgctacctcaactctctctct 5305714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 281
Target Start/End: Original strand, 12577085 - 12577137
Alignment:
Q  228 acataagcctagttttcaccatcttttctactataggtgatacctcaactctct 281  Q
    ||||||| ||||||| ||||||||||||||||| ||||| |||| |||||||||    
T  12577085 acataagtctagtttccaccatcttttctactacaggtgctacc-caactctct 12577137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 280
Target Start/End: Complemental strand, 33667258 - 33667209
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaactctc 280  Q
    |||| |||||||  |||||||||||||||||||||| |||| ||||||||    
T  33667258 taagtctagtttctaccatcttttctactataggtgctaccccaactctc 33667209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 139
Target Start/End: Complemental strand, 43475429 - 43475377
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttataggttttctatgt 139  Q
    |||||||| |||||| ||||||||||||||| |||||||| || ||||||||||    
T  43475429 aactcattaatctctggatctttcttaatagtttctctta-agtttttctatgt 43475377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 159
Target Start/End: Complemental strand, 9235235 - 9235166
Alignment:
Q  88 ctcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgat 159  Q
    |||||| ||||||| |||||||||||||| ||||||  ||| ||||||| |||||||||  |||||| ||||    
T  9235235 ctcattaatctctatatctttcttaatagtttctct--tagtttttctaggtcttcctctgcctctagtgat 9235166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 3e-23; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 86 - 304
Target Start/End: Original strand, 39600773 - 39600994
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacccttcatcttatctagtc 185  Q
    |||||||| | ||||| |||||||||||||| ||||||||||| ||||||| ||||||||| ||||||    || |||||| |||  |||| ||||| ||    
T  39600773 aactcattaacctctaaatctttcttaatagtttctcttatagtttttctaggtcttcctctacctcttgcaatctgactatcctcgatctgatctactc 39600872  T
Q  186 gccatgctacagaatgcacaagttttctctccacgtgctcaaaca---taagcctagttttcaccatcttttctactataggtgatacctcaactctctc 282  Q
     ||  ||||||||||  ||| || ||||||  || |||  ||||    ||||| |  ||| ||||||||||||||||||||||  |||| ||||||||||    
T  39600873 tcctcgctacagaatctacaggtcttctctttacatgccaaaaccacctaagcttgttttccaccatcttttctactataggtactaccccaactctctc 39600972  T
Q  283 tctaatattgtcatttctaatc 304  Q
    |||||| |||||||||||||||    
T  39600973 tctaatgttgtcatttctaatc 39600994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 231 - 303
Target Start/End: Complemental strand, 3987089 - 3987017
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaat 303  Q
    |||| |||||||  ||||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||||    
T  3987089 taagtctagtttctaccatcttttctactataggtgataccccaactctctctccaatatcgtcatttctaat 3987017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 69 - 260
Target Start/End: Complemental strand, 21200755 - 21200561
Alignment:
Q  69 ataccatatttttatgaaactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacc 168  Q
    ||||||||||| |||  |||||||| || ||||||||||||| ||||| || ||| |||| ||||||| |||||||||  || ||| ||||||||||||     
T  21200755 ataccatatttctatccaactcattaatatctagatctttctaaatagtttgtctaatagtttttctaggtcttcctctccccctagtgatttgactact 21200656  T
Q  169 cttcatcttatctagtcgccatgctacagaatgcacaagttttctctccacgtgctcaa---acataagcctagttttcaccatcttttctacta 260  Q
    || ||| | ||||| || || | || ||||||  ||| || ||||||| || ||| |||   || |||| ||||||| |||||||||||||||||    
T  21200655 ctccatgtgatctactctccttactgcagaatctacatgtcttctctctacatgcccaaaccacctaagtctagtttccaccatcttttctacta 21200561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 87 - 170
Target Start/End: Original strand, 2340810 - 2340893
Alignment:
Q  87 actcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactaccct 170  Q
    ||||||| |||||||||||||||||||||| ||||||||||| ||| ||| ||||| ||| | || || |||||||||||||||    
T  2340810 actcattaatctctagatctttcttaatagtttctcttatagttttcctaggtctttctctagctttagtgatttgactaccct 2340893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 86 - 165
Target Start/End: Complemental strand, 11581634 - 11581555
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgact 165  Q
    ||||||||||||| ||||||||||||||||| ||||||||||| ||||||| ||||||    ||||||| ||||||||||    
T  11581634 aactcatttatctatagatctttcttaatagtttctcttatagtttttctaggtcttctcatacctctagtgatttgact 11581555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 231 - 305
Target Start/End: Complemental strand, 50249426 - 50249352
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaatca 305  Q
    |||| ||||||| ||||||||||||||||||| | | |||| |||||||||||||||| || |||||||||||||    
T  50249426 taagtctagtttccaccatcttttctactatacgcgctaccccaactctctctctaatgttatcatttctaatca 50249352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 86 - 285
Target Start/End: Original strand, 45289183 - 45289387
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacccttcatcttatctagtc 185  Q
    |||||||| ||||||| ||||||| |||||| ||||||||||| |||  ||  |||||||| | ||||  | || | |||| ||| ||||| ||||| ||    
T  45289183 aactcattaatctctaaatctttcctaatagtttctcttatagttttcatagatcttcctctatctcttgtaatctaactatcctccatctgatctactc 45289282  T
Q  186 gccatgctacagaatgcacaagttttctctccacgtgctcaaaca---taagcctagttttcaccatcttttctact--ataggtgatacctcaactctc 280  Q
      | | ||||| |||  |||||| ||||||| |||||| |||||    |||||||| ||| ||||||||||||||||  ||||||| |||| ||||||||    
T  45289283 ttcttactacaaaatctacaagtgttctctctacgtgcccaaaccacctaagcctattttccaccatcttttctactgaataggtgctaccccaactctc 45289382  T
Q  281 tctct 285  Q
    |||||    
T  45289383 tctct 45289387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 86 - 136
Target Start/End: Original strand, 36820069 - 36820119
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttataggttttcta 136  Q
    |||||||| |||||||||||||||||||||| ||||||||||| |||||||    
T  36820069 aactcattaatctctagatctttcttaatagtttctcttatagtttttcta 36820119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 231 - 297
Target Start/End: Original strand, 49503794 - 49503860
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtcatt 297  Q
    |||||||| |||  |||||||||||||||||||||| ||||| |||||||||||||||  |||||||    
T  49503794 taagcctattttctaccatcttttctactataggtgctacctgaactctctctctaatggtgtcatt 49503860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 103 - 168
Target Start/End: Original strand, 31261051 - 31261116
Alignment:
Q  103 atctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacc 168  Q
    ||||||||| |||| ||||||||||| ||||||| |||||||||  |||||| |||||||||||||    
T  31261051 atctttcttgatagtttctcttatagtttttctaggtcttcctctgcctctagtgatttgactacc 31261116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 73 - 142
Target Start/End: Original strand, 41452819 - 41452888
Alignment:
Q  73 catatttttatgaaactcatttatctctagatctttcttaatagattctcttataggttttctatgtctt 142  Q
    ||||| |||||  |||||||| |||||||||||||||||||||| ||  ||||||| |||||||||||||    
T  41452819 catatatttatccaactcattaatctctagatctttcttaatagtttaacttatagtttttctatgtctt 41452888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 231 - 304
Target Start/End: Original strand, 47233836 - 47233909
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaatc 304  Q
    |||||||| |||  |||| ||||||||||||||||| |||||| | ||||||||||||  ||||||||||||||    
T  47233836 taagcctattttctaccaacttttctactataggtgctacctccattctctctctaatggtgtcatttctaatc 47233909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 86 - 166
Target Start/End: Original strand, 20262423 - 20262503
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgacta 166  Q
    |||||||| ||||||||||||||||| ||||||| |||||||| |||| |  |||||||||  |||||| || ||||||||    
T  20262423 aactcattgatctctagatctttcttgatagattatcttatagtttttattggtcttcctctgcctctagtgctttgacta 20262503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 86 - 170
Target Start/End: Complemental strand, 26990403 - 26990319
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactaccct 170  Q
    |||||||| ||||||||||| ||||| |||| |||||| |||| ||||||| ||||||| | ||||| | |||||||||| ||||    
T  26990403 aactcattgatctctagatccttcttgatagtttctctaatagtttttctaggtcttcccctacctcgagtgatttgactcccct 26990319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 89 - 303
Target Start/End: Original strand, 31454320 - 31454537
Alignment:
Q  89 tcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccac--ctctaatgatttgactacccttcatcttatctagtcg 186  Q
    ||||| || |||||||| |  ||||||| ||| ||||||| ||||||| ||| ||| | ||  |||||| ||||||||| |||| ||||| ||||| ||     
T  31454320 tcattaatatctagatcctaattaatagtttcccttatagtttttctaggtcatcccctacatctctaaagatttgactcccctccatctgatctactct 31454419  T
Q  187 ccatgctacagaatgcacaagttttctctccacgtgctcaaacat--aagcctagttttcaccatcttttctactataggtgatacctcaactctctctc 284  Q
    ||   ||||||||| | ||  | ||||||| || ||| |||||    ||| |||||||  |||||||||||||||||||||| || | |||| |||||||    
T  31454420 cctaactacagaatccgcatttcttctctctacatgcacaaaccaccaagtctagtttctaccatcttttctactataggtgctaac-caacactctctc 31454518  T
Q  285 taatattgtcatttctaat 303  Q
    |||| ||||||||||||||    
T  31454519 taatgttgtcatttctaat 31454537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 231 - 298
Target Start/End: Original strand, 31337766 - 31337832
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtcattt 298  Q
    ||||||||||||  |||||||||||||||||||||| |||| ||||| ||||||||||  ||||||||    
T  31337766 taagcctagtttcaaccatcttttctactataggtgctacc-caactttctctctaatgctgtcattt 31337832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 88 - 262
Target Start/End: Complemental strand, 37351595 - 37351418
Alignment:
Q  88 ctcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacccttcatcttatctagtcgc 187  Q
    |||||| ||||||||||||||||| || | |||||| |||| ||||||| ||||||| | ||||||| ||||||| || || | ||||| ||||| || |    
T  37351595 ctcattaatctctagatctttcttgattgtttctctaatagtttttctaggtcttcccctacctctagtgatttgcctcccttccatctgatctactctc 37351496  T
Q  188 catgctacagaatgcacaagttttctctccacgtgctcaa---acataagcctagttttcaccatcttttctactata 262  Q
    | | |||| | || |||| |  |||||||||| ||| |||   ||  ||| |||||||  ||||||||||||||||||    
T  37351495 cttactaccgcattcacatgacttctctccacatgcccaaaccactcaagtctagtttctaccatcttttctactata 37351418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 159
Target Start/End: Complemental strand, 29475876 - 29475805
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgat 159  Q
    |||||||| ||||||||||||||||||||||  | |||||||| ||||||| |||||||||  |||||| ||||    
T  29475876 aactcattaatctctagatctttcttaatag--tttcttatagcttttctaggtcttcctctgcctctagtgat 29475805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 231 - 304
Target Start/End: Original strand, 36820201 - 36820272
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaatc 304  Q
    |||||||||||| |||||||||| ||| |||||||| |||| |||  ||||||||||| | |||||||||||||    
T  36820201 taagcctagtttccaccatctttgctaatataggtgctaccccaa--ctctctctaatgtcgtcatttctaatc 36820272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 136
Target Start/End: Original strand, 46431771 - 46431821
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttataggttttcta 136  Q
    |||||||| |||||||||||||| ||||||| ||||||||||| |||||||    
T  46431771 aactcattaatctctagatcttttttaatagtttctcttatagtttttcta 46431821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 231 - 297
Target Start/End: Complemental strand, 54128420 - 54128354
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtcatt 297  Q
    |||||||| |||  |||||||||||||||||||||| |||| |||| |||||||||||  |||||||    
T  54128420 taagcctattttctaccatcttttctactataggtgctaccccaacactctctctaatggtgtcatt 54128354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 170
Target Start/End: Complemental strand, 55244485 - 55244383
Alignment:
Q  69 ataccatatttttatgaaactcatttatctctagatctttcttaatagattctctt-ataggttttctatgtcttcctccacctctaatgatttgactac 167  Q
    ||||||||||| |||  |||||||| |||||||||| |||||||| |  ||||||| | || ||||||| ||||||||   |||||| ||||||||||||    
T  55244485 ataccatatttctatccaactcattaatctctagatttttcttaagaatttctcttaagagtttttctaggtcttccttggcctctagtgatttgactac 55244386  T
Q  168 cct 170  Q
    |||    
T  55244385 cct 55244383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 247 - 304
Target Start/End: Original strand, 344967 - 345024
Alignment:
Q  247 catcttttctactataggtgatacctcaactctctctctaatattgtcatttctaatc 304  Q
    |||||||||||||||| ||| |||| |||||||||||||||| |  ||||||||||||    
T  344967 catcttttctactataagtgctaccccaactctctctctaatgtcatcatttctaatc 345024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 98 - 167
Target Start/End: Complemental strand, 40982074 - 40982005
Alignment:
Q  98 tctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactac 167  Q
    ||||||||||||||||||| | ||||||||| ||||||| ||||||||    ||||| ||||||||||||    
T  40982074 tctagatctttcttaatagttactcttatagtttttctaggtcttcctttgtctctagtgatttgactac 40982005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 231 - 304
Target Start/End: Complemental strand, 52138842 - 52138769
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaatc 304  Q
    |||||||| |||  |||| ||||||||||||||||| |||| | ||||||||||||||  ||||||| ||||||    
T  52138842 taagcctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtcattcctaatc 52138769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 146
Target Start/End: Original strand, 19162679 - 19162739
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctc 146  Q
    |||||||| ||||||| ||||||| |||||| ||||||||||| ||| ||| |||||||||    
T  19162679 aactcattaatctctaaatctttcctaatagtttctcttatagatttcctaggtcttcctc 19162739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 231 - 279
Target Start/End: Complemental strand, 26490357 - 26490309
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaactct 279  Q
    |||||||| |||  |||||||||||||||||||||| ||||||||||||    
T  26490357 taagcctattttctaccatcttttctactataggtgctacctcaactct 26490309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 305
Target Start/End: Complemental strand, 29600927 - 29600867
Alignment:
Q  245 accatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaatca 305  Q
    |||||||||| ||||||| | | |||  |||||||||||||||| ||||||||||||||||    
T  29600927 accatcttttttactataagcgttacgacaactctctctctaatgttgtcatttctaatca 29600867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 174
Target Start/End: Original strand, 40116560 - 40116648
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacccttcat 174  Q
    |||||||| ||||||| |||| || |||||| ||||||||||| ||||||| ||||||||    ||||| |||| |||||| |||||||    
T  40116560 aactcattaatctctaaatctatcctaatagtttctcttatagtttttctaggtcttcctttggctctagtgatctgactatccttcat 40116648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 231 - 303
Target Start/End: Complemental strand, 54279062 - 54278990
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaat 303  Q
    |||||||| |||  |||| ||||||||||||||||| |||| | ||||||||||||||  ||||||| |||||    
T  54279062 taagcctattttctaccaacttttctactataggtgctacccctactctctctctaatggtgtcattcctaat 54278990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 245 - 304
Target Start/End: Complemental strand, 28245465 - 28245406
Alignment:
Q  245 accatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaatc 304  Q
    |||| ||||||||||||||||| |||| | ||||||||||||||  ||||||| ||||||    
T  28245465 accaacttttctactataggtgctacccccactctctctctaatgatgtcattcctaatc 28245406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 89 - 176
Target Start/End: Complemental strand, 43255078 - 43254991
Alignment:
Q  89 tcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacccttcatct 176  Q
    ||||||||||||||||| ||| | |||| |||||| |||| ||||||| |||| || | ||||||| |||| ||||| |||| |||||    
T  43255078 tcatttatctctagatccttcctgatagtttctctcatagtttttctaggtctacccctacctctagtgatctgacttccctccatct 43254991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 107 - 182
Target Start/End: Complemental strand, 46146265 - 46146190
Alignment:
Q  107 ttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacccttcatcttatcta 182  Q
    |||||||||| |||| |||||| |||||||  |||||||   |||||| ||||||||||| || ||||||||||||    
T  46146265 ttcttaatagtttcttttatagtttttctagatcttcctatgcctctagtgatttgactatccatcatcttatcta 46146190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 246 - 304
Target Start/End: Original strand, 54365231 - 54365287
Alignment:
Q  246 ccatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaatc 304  Q
    |||| |||||||||||||||| |||| |||  |||||||||||||| ||||||||||||    
T  54365231 ccatattttctactataggtgctaccccaa--ctctctctaatattttcatttctaatc 54365287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 152
Target Start/End: Complemental strand, 27893279 - 27893213
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctc 152  Q
    |||||||| |||||||| || || ||||||| |||||||||||  |||||| ||||||||| |||||    
T  27893279 aactcattaatctctaggtcctttttaatagtttctcttatagtctttctaggtcttcctctacctc 27893213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 127
Target Start/End: Complemental strand, 33700390 - 33700332
Alignment:
Q  69 ataccatatttttatgaaactcatttatctctagatctttcttaatagattctcttata 127  Q
    |||||||| || |||  |||||||| |||||||||| ||||||||||| ||||||||||    
T  33700390 ataccataattctatctaactcattaatctctagatatttcttaatagcttctcttata 33700332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 288
Target Start/End: Complemental strand, 35033189 - 35033131
Alignment:
Q  230 ataagcctagttttcaccatcttttctactataggtgatacctcaactctctctctaat 288  Q
    ||||||||| |||  |||| ||||||||||||||||| |||| | ||||||||||||||    
T  35033189 ataagcctattttctaccaacttttctactataggtgctacccccactctctctctaat 35033131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 281
Target Start/End: Complemental strand, 38430890 - 38430840
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaactctct 281  Q
    |||||||| |||  |||||||||||||||||||||| ||||||||| ||||    
T  38430890 taagcctattttctaccatcttttctactataggtgctacctcaacgctct 38430840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 116
Target Start/End: Complemental strand, 36304171 - 36304126
Alignment:
Q  71 accatatttttatgaaactcatttatctctagatctttcttaatag 116  Q
    |||||||||| ||  |||||||| ||||||||||||||||||||||    
T  36304171 accatattttgatccaactcattaatctctagatctttcttaatag 36304126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 280
Target Start/End: Original strand, 50960873 - 50960922
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaactctc 280  Q
    |||||||| |||  |||||||||||||||||||||| |||| ||||||||    
T  50960873 taagcctattttctaccatcttttctactataggtgctaccccaactctc 50960922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 304
Target Start/End: Original strand, 51447950 - 51448022
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaatc 304  Q
    |||||||| |||  |||| ||||||||||||||||| |||| | ||||||||||||||  ||||||| ||||||    
T  51447950 taagcctattttctaccaacttttctactataggtgctacc-ctactctctctctaatggtgtcattcctaatc 51448022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 158
Target Start/End: Complemental strand, 11284195 - 11284111
Alignment:
Q  69 ataccatatttttatgaaactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatga 158  Q
    ||||||||||| |||  |||||||| ||||||| |    ||||||||| |||||||||| |||||||| ||||||||| || ||||||||    
T  11284195 ataccatatttatatccaactcattaatctctaca----tcttaatagtttctcttata-gttttctaggtcttcctctacatctaatga 11284111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 287
Target Start/End: Original strand, 41842759 - 41842806
Alignment:
Q  239 gttttcaccatcttttctactataggtgatacctcaactctctctctaa 287  Q
    |||| ||||||||||||||||||||||| |||| ||||| |||||||||    
T  41842759 gtttccaccatcttttctactataggtgctacc-caactttctctctaa 41842806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 182
Target Start/End: Original strand, 42510108 - 42510204
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacccttcatcttatcta 182  Q
    ||||||||||| || | ||||||| |||| | |||||| |||| ||||||| ||||||||   |||||| |||| |||||| ||| ||||| |||||    
T  42510108 aactcatttatttccaaatctttcctaatggtttctctgatagtttttctaggtcttcctttgcctctagtgatctgactatcctccatctgatcta 42510204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 142
Target Start/End: Complemental strand, 43308752 - 43308696
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttataggttttctatgtctt 142  Q
    |||| ||| |||||||||| ||||||||||| ||||||| ||| ||||||| |||||    
T  43308752 aactgattaatctctagatttttcttaatagtttctcttgtagtttttctaggtctt 43308696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 245 - 285
Target Start/End: Complemental strand, 54485566 - 54485526
Alignment:
Q  245 accatcttttctactataggtgatacctcaactctctctct 285  Q
    |||||||||||||| || |||| ||||||||||||||||||    
T  54485566 accatcttttctacaatgggtgctacctcaactctctctct 54485526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 2e-21; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 231 - 303
Target Start/End: Original strand, 12134141 - 12134213
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaat 303  Q
    |||||||| ||| ||||||||||||||||||||||  |||||||| |||||||||||||||||||||||||||    
T  12134141 taagcctattttccaccatcttttctactataggtcgtacctcaattctctctctaatattgtcatttctaat 12134213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 236 - 304
Target Start/End: Original strand, 6641654 - 6641722
Alignment:
Q  236 ctagttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaatc 304  Q
    |||||||  ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| ||||    
T  6641654 ctagtttctaccatcttttctactataggtgataccccaactctatctctaatattgtcatttccaatc 6641722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 231 - 303
Target Start/End: Complemental strand, 33084100 - 33084028
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaat 303  Q
    |||| |||||||  |||||||||||||| ||||||| |||| |||||||||||||||||| ||||||||||||    
T  33084100 taagtctagtttctaccatcttttctaccataggtgctaccccaactctctctctaatatcgtcatttctaat 33084028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 231 - 301
Target Start/End: Complemental strand, 2079382 - 2079313
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtcatttcta 301  Q
    |||||||| ||| |||||||||||||||||||| || |||| |||||| ||||||||||||||||||||||    
T  2079382 taagcctattttccaccatcttttctactatagatgctacc-caactccctctctaatattgtcatttcta 2079313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 86 - 170
Target Start/End: Original strand, 10617326 - 10617410
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactaccct 170  Q
    |||||||| ||||||||||| |||||||| | ||||||||||| ||||||| || ||| || ||||||| |||||||||| ||||    
T  10617326 aactcattaatctctagatccttcttaatggtttctcttatagtttttctaggttttcttctacctctagtgatttgactcccct 10617410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 70 - 176
Target Start/End: Original strand, 33997620 - 33997726
Alignment:
Q  70 taccatatttttatgaaactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactaccc 169  Q
    |||||||||| |||  |||||||| ||||||||   ||||||||||| ||||||||||| ||| | | |||||||||  |||||| || |||||||||||    
T  33997620 taccatatttctatccaactcattaatctctaggcttttcttaatagtttctcttatagttttccaaggtcttcctctgcctctagtgttttgactaccc 33997719  T
Q  170 ttcatct 176  Q
    | |||||    
T  33997720 tccatct 33997726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 86 - 159
Target Start/End: Original strand, 34597 - 34670
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgat 159  Q
    |||||||| |||| ||||||||||||||| | ||||||||||| ||||||| |||||||||  |||||| ||||    
T  34597 aactcattaatctttagatctttcttaatggtttctcttatagtttttctaggtcttcctctgcctctagtgat 34670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 73 - 182
Target Start/End: Original strand, 35199701 - 35199810
Alignment:
Q  73 catatttttatgaaactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacccttc 172  Q
    ||||||| |||  |||||||| ||||||||||||||| |||||| |||| |||||  |||||||  |||| ||| | ||||| |||| |||||||||| |    
T  35199701 catatttctatctaactcattaatctctagatctttcctaatagtttcttttataatttttctaattcttactctagctctagtgatatgactaccctcc 35199800  T
Q  173 atcttatcta 182  Q
    |||| |||||    
T  35199801 atctgatcta 35199810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 73 - 176
Target Start/End: Original strand, 1747720 - 1747823
Alignment:
Q  73 catatttttatgaaactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacccttc 172  Q
    ||||| |||||  |||||||| ||||||||||| ||||||  || ||||||||| | ||||||| |||||||||  ||||||   ||||||||||||| |    
T  1747720 catatctttatccaactcattaatctctagatccttcttaccagtttctcttatggtttttctaggtcttcctctgcctctagaaatttgactaccctcc 1747819  T
Q  173 atct 176  Q
    ||||    
T  1747820 atct 1747823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 136
Target Start/End: Complemental strand, 38953 - 38903
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttataggttttcta 136  Q
    |||||||||||||||||||| ||| |||||| ||||||||||| |||||||    
T  38953 aactcatttatctctagatccttcctaatagtttctcttatagtttttcta 38903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 231 - 304
Target Start/End: Complemental strand, 9706818 - 9706745
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaatc 304  Q
    |||||||| |||  |||| ||||||||| ||||||| |||||| ||||||||||||||  ||||||| ||||||    
T  9706818 taagcctattttctaccaacttttctacaataggtgctacctccactctctctctaatggtgtcattcctaatc 9706745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 239 - 299
Target Start/End: Original strand, 14389415 - 14389473
Alignment:
Q  239 gttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtcatttc 299  Q
    |||| ||||||||||||||| ||||||| ||||||||  ||||||||||||| ||||||||    
T  14389415 gtttccaccatcttttctacgataggtgctacctcaa--ctctctctaatatggtcatttc 14389473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 231 - 304
Target Start/End: Original strand, 20427876 - 20427949
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaatc 304  Q
    |||||||| |||  |||| ||||||||||||||||| |||| | ||||||||||||||  ||||||| ||||||    
T  20427876 taagcctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtcattcctaatc 20427949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 146
Target Start/End: Original strand, 1681613 - 1681673
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctc 146  Q
    |||||||| ||||||||||| |||||||||| ||||||||||  |||| || |||||||||    
T  1681613 aactcattaatctctagatccttcttaatagtttctcttataacttttttaggtcttcctc 1681673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 165
Target Start/End: Complemental strand, 7080527 - 7080451
Alignment:
Q  89 tcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgact 165  Q
    ||||| |||| |||||||||||| |||| ||||||||||| |||| || || |||||| || ||||| |||||||||    
T  7080527 tcattaatctttagatctttcttgatagtttctcttatagtttttataggttttcctctacttctaaagatttgact 7080451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 182
Target Start/End: Original strand, 31831951 - 31832047
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacccttcatcttatcta 182  Q
    |||||| | |||||||||||||||||||||| |||||| |||| ||||||| |  |||||| |  ||| ||||| |||||| ||| ||||| |||||    
T  31831951 aactcagtaatctctagatctttcttaatagtttctctgatagtttttctaggctttcctctatttctgatgatctgactatcctccatctgatcta 31832047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 95 - 166
Target Start/End: Original strand, 4948405 - 4948476
Alignment:
Q  95 atctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgacta 166  Q
    |||||||||||||||| ||||| || |||| ||| |||| || ||||||||| ||||||| || ||||||||    
T  4948405 atctctagatctttctcaatagtttttcttttagtttttgtaggtcttcctctacctctagtggtttgacta 4948476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 95 - 166
Target Start/End: Original strand, 4955376 - 4955447
Alignment:
Q  95 atctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgacta 166  Q
    |||||||||||||||| ||||| || |||| ||| |||| || ||||||||| ||||||| || ||||||||    
T  4955376 atctctagatctttctcaatagtttttcttttagtttttgtaggtcttcctctacctctagtggtttgacta 4955447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 303
Target Start/End: Original strand, 6906932 - 6907139
Alignment:
Q  98 tctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacccttcatcttatctagtcgccatgctacag 197  Q
    |||||||||||||||||||  ||| |||||| ||||| |  ||||| || ||||||  ||||||||||||||| ||||| ||||| || || | |||||     
T  6906932 tctagatctttcttaatagtctct-ttatagcttttcaagatcttcatctacctctcgtgatttgactaccctgcatctgatctactctccttactacaa 6907030  T
Q  198 aatgcacaagttttctctccacgtgctcaa---acataagcctagttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtc 294  Q
    |||  ||| || ||||||| || |   |||   || ||||||||||| | ||||||| ||||||||||||||  ||  ||||||| |   |||| |||||    
T  6907031 aatctacatgtcttctctctacataaccaaactacgtaagcctagttctgaccatctattctactataggtgcaacaccaactctattgataatgttgtc 6907130  T
Q  295 atttctaat 303  Q
    |||||||||    
T  6907131 atttctaat 6907139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 297
Target Start/End: Complemental strand, 28085418 - 28085352
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtcatt 297  Q
    |||||||| |||  |||| ||||||||||||||||| |||| | ||||||||||||||  |||||||    
T  28085418 taagcctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtcatt 28085352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 304
Target Start/End: Complemental strand, 30031298 - 30031225
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaatc 304  Q
    |||||||| |||  |||| ||||||||||||||||| |||| | |||| |||||||||  || |||||||||||    
T  30031298 taagcctattttctaccaacttttctactataggtgctacccccactccctctctaatggtgacatttctaatc 30031225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 176
Target Start/End: Original strand, 32913355 - 32913444
Alignment:
Q  88 ctcatttatctctagatctttcttaatagattctctt-ataggttttctatgtcttcctccacctctaatgatttgactacccttcatct 176  Q
    |||||| ||||||| | |||||||||||| |||| || |||| |||||||   ||| ||| ||||||| ||||||||||||||| |||||    
T  32913355 ctcattaatctctaaagctttcttaatagtttctttttatagtttttctagacctttctctacctctagtgatttgactaccctccatct 32913444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 98 - 182
Target Start/End: Complemental strand, 8364734 - 8364650
Alignment:
Q  98 tctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacccttcatcttatcta 182  Q
    |||| |||||||||||||| ||||||||||| |||| || |||||| ||  |||||| |||| |||| | ||| ||||| |||||    
T  8364734 tctaaatctttcttaatagtttctcttatagtttttttaggtcttcatcttcctctagtgatctgacaatcctccatctgatcta 8364650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 49; Significance: 5e-19; HSPs: 3)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 86 - 182
Target Start/End: Original strand, 178512 - 178608
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactacccttcatcttatcta 182  Q
    |||||||| ||||||| |||||||||||||| ||||||||||| ||||||| ||||| |||| |||||| |||| |||||| || |||||| |||||    
T  178512 aactcattaatctctatatctttcttaatagtttctcttatagtttttctaggtcttactccgcctctagtgatatgactatccgtcatctaatcta 178608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 231 - 304
Target Start/End: Complemental strand, 31510 - 31437
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaatc 304  Q
    |||||||| |||  |||| ||||||||||||||||| |||| | ||||||||||||||  ||||||| ||||||    
T  31510 taagcctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtcattcctaatc 31437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 281
Target Start/End: Original strand, 44108 - 44158
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaactctct 281  Q
    |||||||| ||| | ||||||||||||||||||||| |||| |||||||||    
T  44108 taagcctattttccgccatcttttctactataggtgctaccccaactctct 44158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0373 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0373
Description:

Target: scaffold0373; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 73 - 128
Target Start/End: Original strand, 2380 - 2435
Alignment:
Q  73 catatttttatgaaactcatttatctctagatctttcttaatagattctcttatag 128  Q
    ||||||| ||| ||||||||| ||||||||||||||||||||||  ||||||||||    
T  2380 catatttctatcaaactcattaatctctagatctttcttaatagtctctcttatag 2435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0325 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0325
Description:

Target: scaffold0325; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 87 - 170
Target Start/End: Complemental strand, 11986 - 11903
Alignment:
Q  87 actcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgatttgactaccct 170  Q
    ||||||| ||||||||||| |||||||||| ||||||||||| |||||||  ||||| |   |||||| |||||| ||||||||    
T  11986 actcattaatctctagatccttcttaatagtttctcttatagtttttctagttcttcttttgcctctagtgatttcactaccct 11903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 231 - 304
Target Start/End: Original strand, 25685 - 25758
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaatc 304  Q
    |||||||| |||  |||| ||||||||||||||||| |||| | ||||||||||||||  ||||||| ||||||    
T  25685 taagcctattttctaccaacttttctactataggtgctacccccactctctctctaatggtgtcattcctaatc 25758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 86 - 159
Target Start/End: Complemental strand, 66727 - 66654
Alignment:
Q  86 aactcatttatctctagatctttcttaatagattctcttataggttttctatgtcttcctccacctctaatgat 159  Q
    |||||||| |||||||||||||||||||||  || | |||||  ||||||| |||||||||  |||||||||||    
T  66727 aactcattaatctctagatctttcttaataattttttttataatttttctaggtcttcctctgcctctaatgat 66654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 245 - 297
Target Start/End: Complemental strand, 82749 - 82697
Alignment:
Q  245 accatcttttctactataggtgatacctcaactctctctctaatattgtcatt 297  Q
    |||| ||||||||||||||||| |||| | ||||||||||||||  |||||||    
T  82749 accaacttttctactataggtgctacccccactctctctctaatggtgtcatt 82697  T

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Target: scaffold0021 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 231 - 303
Target Start/End: Original strand, 101015 - 101082
Alignment:
Q  231 taagcctagttttcaccatcttttctactataggtgatacctcaactctctctctaatattgtcatttctaat 303  Q
    |||| |||||||  ||||| |||||||||||||||| ||||||     |||||||||||||||||||| ||||    
T  101015 taagtctagtttcaaccattttttctactataggtgttacctc-----tctctctaatattgtcatttataat 101082  T

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