View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4970-Insertion-4 (Length: 968)

Name: NF4970-Insertion-4
Description: NF4970
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4970-Insertion-4
NF4970-Insertion-4
[»] chr8 (71 HSPs)
chr8 (607-968)||(42845734-42846103)
chr8 (7-401)||(10382327-10382743)
chr8 (7-426)||(9484294-9484733)
chr8 (321-444)||(38572233-38572356)
chr8 (321-444)||(10198236-10198359)
chr8 (313-444)||(43433822-43433953)
chr8 (559-615)||(42844481-42844537)
chr8 (376-455)||(43591007-43591086)
chr8 (312-402)||(2319314-2319404)
chr8 (313-421)||(26579197-26579306)
chr8 (376-447)||(7818482-7818553)
chr8 (376-455)||(11998456-11998535)
chr8 (496-539)||(14718979-14719022)
chr8 (376-447)||(33114195-33114266)
chr8 (376-455)||(40907599-40907677)
chr8 (345-447)||(16889203-16889305)
chr8 (496-542)||(26518711-26518757)
chr8 (376-457)||(7819104-7819185)
chr8 (376-449)||(16880525-16880598)
chr8 (406-455)||(30116033-30116082)
chr8 (406-447)||(35237267-35237308)
chr8 (496-539)||(7219491-7219534)
chr8 (496-539)||(14449527-14449570)
chr8 (496-539)||(16239086-16239129)
chr8 (496-539)||(17045927-17045970)
chr8 (496-539)||(17313459-17313502)
chr8 (496-539)||(27467826-27467869)
chr8 (496-539)||(34805903-34805946)
chr8 (496-539)||(38139425-38139468)
chr8 (496-539)||(39685535-39685578)
chr8 (376-447)||(39852162-39852233)
chr8 (496-539)||(41361102-41361145)
chr8 (404-447)||(41761807-41761850)
chr8 (496-539)||(42844411-42844454)
chr8 (376-455)||(43481288-43481367)
chr8 (496-539)||(43817882-43817925)
chr8 (496-539)||(44908603-44908646)
chr8 (505-539)||(169623-169657)
chr8 (504-542)||(6816154-6816192)
chr8 (496-542)||(35004369-35004415)
chr8 (503-536)||(2184329-2184362)
chr8 (503-536)||(2190564-2190597)
chr8 (406-447)||(11999117-11999158)
chr8 (376-449)||(35237871-35237943)
chr8 (496-537)||(45138971-45139012)
chr8 (497-541)||(1877496-1877540)
chr8 (415-455)||(37533323-37533363)
chr8 (503-539)||(39525571-39525607)
chr8 (496-539)||(12261388-12261431)
chr8 (496-539)||(16845140-16845183)
chr8 (376-455)||(16889835-16889913)
chr8 (376-455)||(36848204-36848283)
chr8 (496-539)||(38137637-38137680)
chr8 (496-539)||(39485945-39485988)
chr8 (378-457)||(39852812-39852891)
chr8 (496-539)||(40048594-40048637)
chr8 (620-655)||(40863994-40864029)
chr8 (496-539)||(41526421-41526464)
chr8 (376-447)||(43591623-43591694)
chr8 (376-455)||(44061985-44062064)
chr8 (497-539)||(11579305-11579347)
chr8 (505-539)||(27748957-27748991)
chr8 (287-339)||(9484854-9484907)
chr8 (406-447)||(10806474-10806515)
chr8 (506-539)||(11924890-11924923)
chr8 (506-539)||(15310522-15310555)
chr8 (506-539)||(15490891-15490924)
chr8 (505-542)||(22947641-22947678)
chr8 (496-537)||(24511638-24511679)
chr8 (506-539)||(29868613-29868646)
chr8 (414-447)||(37532584-37532617)
[»] chr4 (77 HSPs)
chr4 (7-356)||(52720907-52721257)
chr4 (313-455)||(52869447-52869590)
chr4 (374-455)||(52722078-52722158)
chr4 (376-455)||(198999-199078)
chr4 (312-402)||(51288884-51288974)
chr4 (406-457)||(48090464-48090515)
chr4 (296-447)||(52720605-52720756)
chr4 (376-455)||(389412-389491)
chr4 (376-455)||(20075525-20075604)
chr4 (376-455)||(52597490-52597569)
chr4 (376-455)||(55816457-55816536)
chr4 (313-411)||(52533345-52533443)
chr4 (321-409)||(29975665-29975753)
chr4 (376-447)||(199233-199304)
chr4 (408-455)||(20422131-20422178)
chr4 (496-539)||(24303722-24303765)
chr4 (496-539)||(32206512-32206555)
chr4 (496-539)||(34663966-34664009)
chr4 (376-455)||(36945230-36945309)
chr4 (376-455)||(40345137-40345216)
chr4 (406-456)||(12640623-12640673)
chr4 (497-539)||(18138452-18138494)
chr4 (409-455)||(36111256-36111302)
chr4 (497-539)||(49125663-49125705)
chr4 (406-447)||(388761-388802)
chr4 (331-455)||(3221348-3221473)
chr4 (376-444)||(25370399-25370467)
chr4 (496-539)||(1166750-1166793)
chr4 (496-539)||(1169232-1169275)
chr4 (376-447)||(2713850-2713921)
chr4 (496-539)||(7365908-7365951)
chr4 (496-539)||(7400126-7400169)
chr4 (496-539)||(8151313-8151356)
chr4 (496-539)||(11200946-11200989)
chr4 (376-447)||(12639973-12640044)
chr4 (496-539)||(13890912-13890955)
chr4 (496-539)||(17976558-17976601)
chr4 (376-455)||(26423759-26423838)
chr4 (496-539)||(27288392-27288435)
chr4 (496-539)||(28116752-28116795)
chr4 (376-455)||(32902472-32902551)
chr4 (496-539)||(36189977-36190020)
chr4 (496-539)||(40951057-40951100)
chr4 (496-539)||(46045719-46045762)
chr4 (376-455)||(48782081-48782160)
chr4 (496-539)||(53274741-53274784)
chr4 (376-447)||(55815833-55815904)
chr4 (497-539)||(45019184-45019226)
chr4 (321-442)||(3220530-3220651)
chr4 (376-449)||(25369789-25369862)
chr4 (274-421)||(51287920-51288068)
chr4 (506-542)||(22557087-22557123)
chr4 (503-539)||(28361412-28361448)
chr4 (407-447)||(35428238-35428278)
chr4 (496-539)||(8848051-8848094)
chr4 (496-539)||(17624775-17624818)
chr4 (496-539)||(23628946-23628989)
chr4 (496-539)||(26111493-26111536)
chr4 (376-447)||(31876796-31876867)
chr4 (496-539)||(32200636-32200679)
chr4 (376-447)||(33569728-33569799)
chr4 (409-456)||(35427245-35427292)
chr4 (496-539)||(39651843-39651886)
chr4 (376-447)||(40847685-40847756)
chr4 (496-539)||(40952131-40952174)
chr4 (376-447)||(48091102-48091173)
chr4 (496-539)||(52620733-52620776)
chr4 (496-539)||(55208403-55208446)
chr4 (496-539)||(55991933-55991976)
chr4 (496-542)||(11966920-11966966)
chr4 (413-447)||(18501747-18501781)
chr4 (497-539)||(20681304-20681345)
chr4 (505-539)||(32139536-32139570)
chr4 (496-542)||(34264547-34264593)
chr4 (505-539)||(34664942-34664976)
chr4 (496-537)||(346525-346566)
chr4 (406-447)||(37567511-37567552)
[»] chr5 (50 HSPs)
chr5 (287-446)||(25074914-25075074)
chr5 (287-446)||(25132883-25133043)
chr5 (287-447)||(25074291-25074452)
chr5 (287-447)||(25132260-25132421)
chr5 (278-424)||(3135954-3136101)
chr5 (313-455)||(39148768-39148911)
chr5 (296-394)||(3136427-3136525)
chr5 (332-455)||(38064826-38064949)
chr5 (376-457)||(26687498-26687579)
chr5 (376-457)||(26957229-26957310)
chr5 (376-447)||(3957508-3957579)
chr5 (496-539)||(2530197-2530240)
chr5 (496-539)||(3297743-3297786)
chr5 (496-539)||(4374772-4374815)
chr5 (376-455)||(4928871-4928950)
chr5 (496-539)||(8314941-8314984)
chr5 (496-539)||(10042908-10042951)
chr5 (496-539)||(14205524-14205567)
chr5 (496-539)||(16488046-16488089)
chr5 (496-539)||(24027778-24027821)
chr5 (496-539)||(24759093-24759136)
chr5 (496-539)||(25821333-25821376)
chr5 (496-539)||(42110800-42110843)
chr5 (406-447)||(4929543-4929584)
chr5 (496-541)||(7536757-7536802)
chr5 (406-455)||(21769994-21770043)
chr5 (506-539)||(31884583-31884616)
chr5 (406-447)||(39149468-39149509)
chr5 (406-454)||(8813078-8813126)
chr5 (503-539)||(32261634-32261670)
chr5 (503-539)||(42322994-42323030)
chr5 (496-539)||(665479-665522)
chr5 (496-539)||(789980-790023)
chr5 (496-539)||(3246940-3246983)
chr5 (496-539)||(28746237-28746280)
chr5 (496-539)||(29383645-29383688)
chr5 (496-539)||(30503449-30503492)
chr5 (496-539)||(30503676-30503719)
chr5 (496-539)||(30543792-30543835)
chr5 (496-539)||(30544019-30544062)
chr5 (496-539)||(31939752-31939795)
chr5 (504-539)||(36083913-36083948)
chr5 (504-539)||(36088698-36088733)
chr5 (496-539)||(42111728-42111771)
chr5 (504-539)||(42416919-42416954)
chr5 (496-539)||(43396634-43396677)
chr5 (510-540)||(29382522-29382552)
chr5 (376-449)||(3958141-3958214)
chr5 (406-455)||(5324304-5324353)
chr5 (496-537)||(39783070-39783111)
[»] chr6 (28 HSPs)
chr6 (287-455)||(2038596-2038765)
chr6 (338-439)||(2039582-2039683)
chr6 (376-455)||(6032158-6032237)
chr6 (496-539)||(32244489-32244532)
chr6 (405-447)||(13936676-13936718)
chr6 (496-539)||(7541217-7541260)
chr6 (496-539)||(17505599-17505642)
chr6 (496-539)||(18593528-18593571)
chr6 (496-539)||(24046481-24046524)
chr6 (496-539)||(28472335-28472378)
chr6 (496-539)||(29859524-29859567)
chr6 (496-539)||(34206930-34206973)
chr6 (280-424)||(1018596-1018741)
chr6 (376-454)||(5523201-5523279)
chr6 (496-542)||(33945735-33945781)
chr6 (313-346)||(2039263-2039296)
chr6 (406-455)||(12809069-12809118)
chr6 (406-447)||(33668229-33668270)
chr6 (496-539)||(559840-559883)
chr6 (376-447)||(5523853-5523924)
chr6 (496-539)||(6018492-6018535)
chr6 (496-539)||(10943068-10943111)
chr6 (376-447)||(30611352-30611423)
chr6 (496-539)||(34247674-34247717)
chr6 (376-442)||(31723846-31723912)
chr6 (496-537)||(3850338-3850379)
chr6 (376-449)||(13944296-13944369)
chr6 (505-542)||(24162914-24162951)
[»] chr3 (67 HSPs)
chr3 (296-424)||(41639026-41639154)
chr3 (321-455)||(38279409-38279543)
chr3 (312-455)||(37242899-37243042)
chr3 (312-455)||(1259611-1259754)
chr3 (376-449)||(8427750-8427823)
chr3 (274-444)||(46993332-46993505)
chr3 (313-455)||(41041198-41041341)
chr3 (215-266)||(46993711-46993762)
chr3 (376-455)||(55281835-55281914)
chr3 (406-456)||(25025801-25025851)
chr3 (312-424)||(44445521-44445633)
chr3 (376-447)||(3944903-3944974)
chr3 (376-455)||(29342341-29342420)
chr3 (376-455)||(44868625-44868704)
chr3 (496-539)||(50739267-50739310)
chr3 (496-539)||(50773545-50773588)
chr3 (406-455)||(23584237-23584286)
chr3 (406-455)||(23599060-23599109)
chr3 (312-449)||(34872971-34873108)
chr3 (406-455)||(41459130-41459179)
chr3 (376-444)||(32672177-32672245)
chr3 (496-539)||(875880-875923)
chr3 (496-539)||(4019031-4019074)
chr3 (496-539)||(7040995-7041038)
chr3 (496-539)||(7265169-7265212)
chr3 (496-539)||(14587304-14587347)
chr3 (496-539)||(15496388-15496431)
chr3 (496-539)||(22346997-22347040)
chr3 (376-447)||(23584890-23584961)
chr3 (376-447)||(23599713-23599784)
chr3 (376-447)||(25025182-25025253)
chr3 (496-539)||(26881734-26881777)
chr3 (496-539)||(29500447-29500490)
chr3 (496-539)||(30269001-30269044)
chr3 (496-539)||(45599184-45599227)
chr3 (496-539)||(47719597-47719640)
chr3 (496-539)||(48961230-48961273)
chr3 (376-447)||(50687715-50687786)
chr3 (496-539)||(52461142-52461185)
chr3 (496-539)||(52674896-52674939)
chr3 (496-539)||(53022780-53022823)
chr3 (496-539)||(54203669-54203712)
chr3 (496-539)||(54510305-54510348)
chr3 (496-539)||(54741920-54741963)
chr3 (376-457)||(31014335-31014416)
chr3 (331-455)||(46186957-46187082)
chr3 (496-537)||(46757674-46757715)
chr3 (503-539)||(2909555-2909591)
chr3 (407-455)||(19555964-19556012)
chr3 (505-537)||(46088640-46088672)
chr3 (406-454)||(50674630-50674678)
chr3 (504-539)||(12101380-12101415)
chr3 (496-539)||(29450774-29450817)
chr3 (504-539)||(35529776-35529811)
chr3 (496-539)||(36592134-36592177)
chr3 (496-539)||(36987657-36987700)
chr3 (496-539)||(37013096-37013139)
chr3 (496-539)||(39721372-39721415)
chr3 (496-539)||(48545224-48545267)
chr3 (376-447)||(50675132-50675203)
chr3 (376-447)||(55282428-55282498)
chr3 (406-444)||(37373976-37374014)
chr3 (505-539)||(41990683-41990717)
chr3 (413-447)||(53269392-53269426)
chr3 (406-455)||(37375505-37375554)
chr3 (506-539)||(38361874-38361907)
chr3 (343-424)||(55125263-55125344)
[»] chr7 (54 HSPs)
chr7 (313-455)||(84377-84520)
chr7 (332-455)||(8464387-8464510)
chr7 (323-424)||(46251421-46251522)
chr7 (376-455)||(34853391-34853470)
chr7 (376-456)||(24044050-24044130)
chr7 (376-454)||(36683471-36683549)
chr7 (406-455)||(19816264-19816313)
chr7 (406-455)||(42456553-42456602)
chr7 (376-456)||(47814642-47814722)
chr7 (376-455)||(46814405-46814484)
chr7 (376-444)||(22276083-22276151)
chr7 (496-539)||(4404403-4404446)
chr7 (496-539)||(4406544-4406587)
chr7 (496-539)||(4407959-4408002)
chr7 (376-439)||(4894515-4894578)
chr7 (496-539)||(12908023-12908066)
chr7 (496-539)||(18956217-18956260)
chr7 (376-455)||(22275425-22275503)
chr7 (496-539)||(23154745-23154788)
chr7 (376-447)||(34854003-34854074)
chr7 (376-447)||(36682843-36682914)
chr7 (496-539)||(40035947-40035990)
chr7 (496-539)||(40239814-40239857)
chr7 (496-539)||(43156303-43156346)
chr7 (504-542)||(20135002-20135040)
chr7 (497-539)||(37143542-37143584)
chr7 (496-537)||(4492356-4492397)
chr7 (343-424)||(12732776-12732857)
chr7 (406-455)||(27856167-27856216)
chr7 (506-542)||(5526226-5526262)
chr7 (504-539)||(4399984-4400019)
chr7 (376-447)||(4895089-4895160)
chr7 (496-539)||(10999225-10999268)
chr7 (496-539)||(16933404-16933447)
chr7 (496-539)||(16938787-16938830)
chr7 (496-539)||(17278268-17278311)
chr7 (376-447)||(19816899-19816970)
chr7 (496-535)||(27031149-27031188)
chr7 (376-447)||(27855574-27855644)
chr7 (496-539)||(29448634-29448677)
chr7 (312-347)||(31235063-31235098)
chr7 (496-539)||(32960714-32960757)
chr7 (496-539)||(37669187-37669230)
chr7 (496-539)||(38045769-38045812)
chr7 (496-539)||(41343238-41343281)
chr7 (496-542)||(20482395-20482441)
chr7 (496-542)||(23639330-23639376)
chr7 (409-455)||(24324021-24324067)
chr7 (409-447)||(42455929-42455967)
chr7 (406-447)||(85086-85127)
chr7 (506-539)||(5483528-5483561)
chr7 (406-447)||(33806604-33806645)
chr7 (506-539)||(41427084-41427117)
chr7 (376-441)||(47813985-47814050)
[»] chr1 (56 HSPs)
chr1 (321-455)||(48620275-48620409)
chr1 (376-457)||(52859795-52859876)
chr1 (405-455)||(42839701-42839751)
chr1 (376-455)||(1403695-1403773)
chr1 (376-455)||(8560750-8560828)
chr1 (376-455)||(27797117-27797196)
chr1 (496-539)||(39326962-39327005)
chr1 (376-455)||(43368842-43368921)
chr1 (496-542)||(11754143-11754189)
chr1 (496-542)||(31215779-31215825)
chr1 (496-542)||(31221534-31221580)
chr1 (496-537)||(14487244-14487285)
chr1 (376-441)||(42839555-42839620)
chr1 (376-447)||(1403048-1403119)
chr1 (496-539)||(7833659-7833702)
chr1 (496-539)||(9574975-9575018)
chr1 (496-539)||(17366272-17366315)
chr1 (496-539)||(25659727-25659770)
chr1 (496-539)||(33642724-33642767)
chr1 (496-539)||(33895134-33895177)
chr1 (496-539)||(36165437-36165480)
chr1 (496-539)||(38802419-38802462)
chr1 (496-539)||(40432116-40432159)
chr1 (496-539)||(41901617-41901660)
chr1 (376-447)||(42838945-42839016)
chr1 (496-539)||(43120696-43120739)
chr1 (496-539)||(44819822-44819865)
chr1 (409-455)||(7219687-7219733)
chr1 (496-542)||(45104294-45104340)
chr1 (406-447)||(49534433-49534474)
chr1 (506-542)||(11606378-11606414)
chr1 (503-539)||(34078401-34078437)
chr1 (503-539)||(47037048-47037084)
chr1 (496-539)||(17585629-17585672)
chr1 (376-447)||(27797743-27797814)
chr1 (376-447)||(27817011-27817082)
chr1 (496-539)||(33373738-33373781)
chr1 (496-539)||(33818013-33818056)
chr1 (496-539)||(33831848-33831891)
chr1 (496-539)||(33877481-33877524)
chr1 (496-539)||(33894011-33894054)
chr1 (496-539)||(33933029-33933072)
chr1 (376-455)||(42840320-42840399)
chr1 (496-539)||(46588010-46588053)
chr1 (505-539)||(16097467-16097501)
chr1 (406-440)||(29148955-29148989)
chr1 (505-539)||(36952631-36952665)
chr1 (497-539)||(39729123-39729165)
chr1 (496-542)||(43119029-43119075)
chr1 (376-442)||(43368203-43368269)
chr1 (504-542)||(46040402-46040440)
chr1 (410-447)||(8560164-8560201)
chr1 (505-542)||(12247682-12247719)
chr1 (504-537)||(17249157-17249190)
chr1 (504-537)||(43123160-43123193)
chr1 (376-449)||(49533749-49533822)
[»] chr2 (51 HSPs)
chr2 (352-447)||(44829261-44829356)
chr2 (376-456)||(28224395-28224475)
chr2 (376-455)||(6849288-6849367)
chr2 (376-447)||(4386967-4387038)
chr2 (376-447)||(9224274-9224345)
chr2 (406-449)||(10883293-10883336)
chr2 (376-455)||(16887583-16887662)
chr2 (496-542)||(4631326-4631372)
chr2 (406-455)||(3595246-3595295)
chr2 (406-455)||(7717321-7717370)
chr2 (406-447)||(16571126-16571167)
chr2 (496-539)||(971068-971111)
chr2 (496-539)||(1835798-1835841)
chr2 (496-539)||(3079830-3079873)
chr2 (496-539)||(3243212-3243255)
chr2 (496-539)||(7274785-7274828)
chr2 (376-447)||(7716679-7716750)
chr2 (496-539)||(8683773-8683816)
chr2 (496-539)||(8878234-8878277)
chr2 (496-539)||(17032731-17032774)
chr2 (496-539)||(17051067-17051110)
chr2 (376-447)||(20244178-20244249)
chr2 (376-447)||(28223796-28223867)
chr2 (496-539)||(34912764-34912807)
chr2 (496-539)||(40202328-40202371)
chr2 (496-542)||(1118093-1118139)
chr2 (497-539)||(3324181-3324223)
chr2 (409-455)||(16571766-16571812)
chr2 (497-539)||(35423894-35423936)
chr2 (406-455)||(4386355-4386404)
chr2 (406-447)||(8113337-8113378)
chr2 (406-447)||(12206796-12206837)
chr2 (496-537)||(31972396-31972437)
chr2 (505-538)||(38879258-38879291)
chr2 (496-537)||(38959564-38959605)
chr2 (376-449)||(39477332-39477405)
chr2 (496-536)||(5166381-5166421)
chr2 (376-444)||(6849549-6849617)
chr2 (497-537)||(36078481-36078521)
chr2 (496-539)||(668209-668252)
chr2 (496-539)||(20313165-20313208)
chr2 (496-539)||(36085864-36085907)
chr2 (409-455)||(7583132-7583178)
chr2 (496-542)||(24926000-24926046)
chr2 (409-455)||(40166883-40166929)
chr2 (409-447)||(43743842-43743880)
chr2 (496-530)||(45474836-45474870)
chr2 (406-447)||(7583830-7583871)
chr2 (406-455)||(8112680-8112729)
chr2 (376-449)||(11256122-11256195)
chr2 (505-542)||(35287223-35287260)
[»] scaffold0481 (2 HSPs)
scaffold0481 (496-542)||(4428-4474)
scaffold0481 (496-539)||(7564-7607)
[»] scaffold0229 (1 HSPs)
scaffold0229 (376-447)||(15240-15311)
[»] scaffold0178 (1 HSPs)
scaffold0178 (496-539)||(7207-7250)
[»] scaffold0166 (1 HSPs)
scaffold0166 (496-539)||(1587-1630)
[»] scaffold0020 (1 HSPs)
scaffold0020 (496-539)||(132772-132815)
[»] scaffold0368 (1 HSPs)
scaffold0368 (405-447)||(11820-11862)
[»] scaffold0198 (1 HSPs)
scaffold0198 (497-539)||(15177-15219)
[»] scaffold1793 (1 HSPs)
scaffold1793 (496-539)||(185-228)
[»] scaffold0197 (1 HSPs)
scaffold0197 (496-539)||(25823-25866)
[»] scaffold0039 (1 HSPs)
scaffold0039 (321-447)||(90623-90749)
[»] scaffold0244 (1 HSPs)
scaffold0244 (505-542)||(7490-7527)
[»] scaffold0024 (1 HSPs)
scaffold0024 (506-539)||(90377-90410)


Alignment Details
Target: chr8 (Bit Score: 304; Significance: 1e-170; HSPs: 71)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 304; E-Value: 1e-170
Query Start/End: Original strand, 607 - 968
Target Start/End: Original strand, 42845734 - 42846103
Alignment:
Q  607 tgtaaacagatttac--gcagtactaagaaaaggattgaaaatcatgttaagagatgcagcaaagtccaaaacatatataatggagatgtttttctcaat 704  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42845734 tgtaaacagatttacaggcagtactaagaaaaggattgaaaatcatgttaagagatgcagcaaagtccaaaacatatataatggagatgtttttctcaat 42845833  T
Q  705 aaatgtgattgaataaaaccaaaactgtttttctcaataaatgtgattgactaaaaccaaaacaaattgcaacaaagaaattttagaaaaccgaatgttg 804  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  42845834 aaatgtgattgaataaaaccaaaactgtttttctcaataaatgtgattgactaaaaccaaaacaaattgcaacaaagaaattttagaaaactgaatgttg 42845933  T
Q  805 aa--actatgttgctggaaaattgccttcgccgaaattaaactgaagtttc-ggggaataaaccaccaagtgctgaaccttagaataagcatgt-aatga 900  Q
    ||  ||||||||||||||||||||||||| ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| |||||    
T  42845934 aaccactatgttgctggaaaattgccttcaccgaaattaaactgaagtttctgggaaataaaccaccaagtgctgaaccttagaataagcatgtaaatga 42846033  T
Q  901 agcc-aacatcgaacaatgggcaatagatactcattcaacaatatagac-agctatgtggctaaaccatc 968  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  42846034 agccaaacatcgaacaatgggcaatagatactcattcaacaatatagacaagctatgtggctaaaccatc 42846103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 225; E-Value: 1e-123
Query Start/End: Original strand, 7 - 401
Target Start/End: Original strand, 10382327 - 10382743
Alignment:
Q  7 atcaaatagcaacaaaaatataatttttagtactgtatttcaacaagtgctcatttctaatactcaatctatacaccaacccttcaaaccttttatatat 106  Q
    |||||||||||||||||||| ||| | |||||||||||||||||||||| ||| ||||||||||||||||||| |||||||||||||||||||||||||     
T  10382327 atcaaatagcaacaaaaatagaatatctagtactgtatttcaacaagtgttcacttctaatactcaatctatataccaacccttcaaaccttttatatac 10382426  T
Q  107 agtgattagtcatatctctcctataaaacatcaacacagtacacagaagcacacattggacaggagtgagaccaacacatgagcatgtaatagtttaaca 206  Q
    |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  10382427 agtgattagtcatatctctcctataaaacaccaacacagtacacaaaagcacacattggacacgagtgagaccaacacataagcatgtaatagtttaaca 10382526  T
Q  207 aattaa---------------------acgggtctcttgattttttaatcaagaagtataagatcaatttttacagcttatgaaatttttacaggttgtt 285  Q
    ||||||                     | ||||||||| |||||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||    
T  10382527 aattaaattaaatgtaatcaccaccatatgggtctcttcattttttaatcaagaagtataatatcaatttttacagcttatggaatttttaaaggttgtt 10382626  T
Q  286 tgatgttgctgtggtggggagtaagaagagagaatggtggtggaaggtg-taaaagaaataatctagtgttgaaagtgtaccatatgattgtgttcttca 384  Q
    ||||||||||||||||||||| ||| |||||||| |||||| |||||||  ||||||||||||||| ||||| |||||||| |||  | |||||||||||    
T  10382627 tgatgttgctgtggtggggaggaaggagagagaagggtggttgaaggtgaaaaaagaaataatctaatgttggaagtgtacgataaaactgtgttcttca 10382726  T
Q  385 attaatctaatgactaa 401  Q
     || |||||||||||||    
T  10382727 tttgatctaatgactaa 10382743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 7 - 426
Target Start/End: Complemental strand, 9484733 - 9484294
Alignment:
Q  7 atcaaatagcaacaaaaatataatttttagtactgtatttcaacaagtgctcatttctaatactcaatctatacaccaacccttcaaaccttttatatat 106  Q
    |||||||||||||||||||| ||| | |||||||||||||||||||||| ||| |||||||||||||| |||| |||||||||||||||||||||||||     
T  9484733 atcaaatagcaacaaaaatagaatatctagtactgtatttcaacaagtgttcacttctaatactcaatttatataccaacccttcaaaccttttatatac 9484634  T
Q  107 agtgattagtcatatctctcctataaaacatcaacacagtacacagaagcacacattggacaggagtgagaccaacacatgagcatgtaatagtttaaca 206  Q
    |||||||||||||||||||||||||||||| ||||||||||||| |||| |||||||||||| |||||||||||   ||| |||||||||||||||||||    
T  9484633 agtgattagtcatatctctcctataaaacaccaacacagtacactgaagtacacattggacatgagtgagacca--tcataagcatgtaatagtttaaca 9484536  T
Q  207 aattaa---------------------acgggtctcttgattttttaatcaagaagtataagatcaatttttacagcttatgaaatttttacaggttgtt 285  Q
    ||||||                     | ||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| ||||||    
T  9484535 aattaaattaaatgtaatcaccaccagatgggtctcttgattttttaatcaagaagtataagatcaatttttacagcttatagaatttttacatgttgtt 9484436  T
Q  286 tgatgttgctgtggtggggagtaagaagagagaatggtggtggaaggt-gtaaaagaaataatctagtgttgaaagtgtaccatatgattgtgttcttca 384  Q
    ||||||||||||||||||||| ||| |||||||| |||||| |||||| | ||||||||||||||||| |||||||||||  |||  | |||||||||||    
T  9484435 tgatgttgctgtggtggggaggaaggagagagaagggtggttgaaggtggaaaaagaaataatctagtattgaaagtgtatgataaaactgtgttcttca 9484336  T
Q  385 attaatctaatgactaaagttaactttcccatggtgggaatg 426  Q
     ||||| |||||  |||||| || |||   ||||||||||||    
T  9484335 tttaatttaatggttaaagtaaatttttttatggtgggaatg 9484294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 321 - 444
Target Start/End: Complemental strand, 38572356 - 38572233
Alignment:
Q  321 ggtggtggaaggtgtaaaagaaataatctagtgttgaaagtgtaccatatgattgtgttcttcaattaatctaatgactaaagttaactttcccatggtg 420  Q
    |||||||||| |||||| ||||||||||||||| ||| ||||||  ||| ||||||||||||||||||||||||||  | ||||||||||||||||||||    
T  38572356 ggtggtggaaagtgtaatagaaataatctagtgctgacagtgtatgataagattgtgttcttcaattaatctaatggtttaagttaactttcccatggtg 38572257  T
Q  421 ggaatggattaacctttcccatgt 444  Q
    ||||  |||| |||||||||||||    
T  38572256 ggaaaagattgacctttcccatgt 38572233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 321 - 444
Target Start/End: Complemental strand, 10198359 - 10198236
Alignment:
Q  321 ggtggtggaaggtgtaaaagaaataatctagtgttgaaagtgtaccatatgattgtgttcttcaattaatctaatgactaaagttaactttcccatggtg 420  Q
    |||||||||| |||||| ||||||||||||||| ||| ||||||  ||| ||||||||||||||||||||||||||  | ||||||||||||||||||||    
T  10198359 ggtggtggaaagtgtaatagaaataatctagtgctgacagtgtatgataagattgtgttcttcaattaatctaatggtttaagttaactttcccatggtg 10198260  T
Q  421 ggaatggattaacctttcccatgt 444  Q
    | ||  |||| |||||||||||||    
T  10198259 gaaaaagattgacctttcccatgt 10198236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 313 - 444
Target Start/End: Complemental strand, 43433953 - 43433822
Alignment:
Q  313 gagagaatggtggtggaaggtgtaaaagaaataatctagtgttgaaagtgtaccatatgattgtgttcttcaattaatctaatgactaaagttaactttc 412  Q
    |||||||| |||||| ||| ||||||||||||||| |||||||| |||| ||  ||| ||||||||||||||||| |||||||| ||||||| |||||||    
T  43433953 gagagaatagtggtgaaagatgtaaaagaaataatatagtgttggaagtctatgataagattgtgttcttcaattcatctaatggctaaagtgaactttc 43433854  T
Q  413 ccatggtgggaatggattaacctttcccatgt 444  Q
    ||||||||||||  ||||  ||||||||||||    
T  43433853 ccatggtgggaaatgattcccctttcccatgt 43433822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 559 - 615
Target Start/End: Original strand, 42844481 - 42844537
Alignment:
Q  559 tcgaacaagctgcctttttctgcaattgacaacactgatggaagcacatgtaaacag 615  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  42844481 tcgaacaagccgcctttttctgcaattgacaacactgatggaagcacatgtaaacag 42844537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 376 - 455
Target Start/End: Complemental strand, 43591086 - 43591007
Alignment:
Q  376 tgttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcccatgtgaacaaacacc 455  Q
    ||||||||| |||||||||| | | || | ||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  43591086 tgttcttcatttaatctaatcattgaattcaactttcccatggtgggaaaggattaacctttcccatgtgaacacacacc 43591007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 312 - 402
Target Start/End: Complemental strand, 2319404 - 2319314
Alignment:
Q  312 agagagaatggtggtggaaggtgtaaaagaaataatctagtgttgaaagtgtaccatatgattgtgttcttcaattaatctaatgactaaa 402  Q
    |||||||| |||||||| ||||||||||||||||||| ||||||  |||||||  ||| ||| ||||| |  |||||||||||||||||||    
T  2319404 agagagaagggtggtgggaggtgtaaaagaaataatccagtgttacaagtgtatgataagatggtgttttcaaattaatctaatgactaaa 2319314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 313 - 421
Target Start/End: Original strand, 26579197 - 26579306
Alignment:
Q  313 gagagaatggtggtggaaggtgtaaaagaaataatctagtgttgaaagtgtaccatatgattgtgttc-ttcaattaatctaatgactaaagttaacttt 411  Q
    ||||||| |||||||||  |||| |||||||||||||||||||| ||| |||  |||  |||||| || ||||||||||| ||||  |||||| ||||||    
T  26579197 gagagaagggtggtggagtgtgtgaaagaaataatctagtgttggaagggtaggataatattgtgctctttcaattaatcaaatggttaaagtgaacttt 26579296  T
Q  412 cccatggtgg 421  Q
    ||||||||||    
T  26579297 cccatggtgg 26579306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 376 - 447
Target Start/End: Complemental strand, 7818553 - 7818482
Alignment:
Q  376 tgttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcccatgtgaa 447  Q
    ||||||||| |||||||||| | | ||   ||||||||||||||||||| ||||||||||||||||||||||    
T  7818553 tgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtgaa 7818482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 376 - 455
Target Start/End: Complemental strand, 11998535 - 11998456
Alignment:
Q  376 tgttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcccatgtgaacaaacacc 455  Q
    ||||||||| |||||||||| | | ||   |||||||||||||||||||  ||||||||||||||||||||||| |||||    
T  11998535 tgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaatgattaacctttcccatgtgaacacacacc 11998456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 496 - 539
Target Start/End: Original strand, 14718979 - 14719022
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| |||||||||||||||||||||||||||||||||||||    
T  14718979 cttaaagagctttattttaactttattttaaagtagcttttaga 14719022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 376 - 447
Target Start/End: Original strand, 33114195 - 33114266
Alignment:
Q  376 tgttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcccatgtgaa 447  Q
    ||||||||| |||||||||| | | ||   ||||||||||||||||||| ||||||||||||||||||||||    
T  33114195 tgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtgaa 33114266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 376 - 455
Target Start/End: Complemental strand, 40907677 - 40907599
Alignment:
Q  376 tgttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcccatgtgaacaaacacc 455  Q
    ||||||||| |||||||||| | | || | ||||||||| ||||||||| |||||||||||||||||||||||| |||||    
T  40907677 tgttcttcacttaatctaatcattgaa-tcaactttcccgtggtgggaaaggattaacctttcccatgtgaacacacacc 40907599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 345 - 447
Target Start/End: Complemental strand, 16889305 - 16889203
Alignment:
Q  345 aatctagtgttgaaagtgtaccatatgattgtgttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcccatgt 444  Q
    |||||||||||||||| | |  ||| || | ||||||||| |||||||||| | | ||   |||||||||||||||||||  ||||||||||||||||||    
T  16889305 aatctagtgttgaaagagcatgataagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaagattaacctttcccatgt 16889206  T
Q  445 gaa 447  Q
    |||    
T  16889205 gaa 16889203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 496 - 542
Target Start/End: Complemental strand, 26518757 - 26518711
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttagatcg 542  Q
    |||||| |||||||| |||||||||||||||||||||||||||||||    
T  26518757 cttaaagagctttatcttaactttattttaaagtagcttttagatcg 26518711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 376 - 457
Target Start/End: Original strand, 7819104 - 7819185
Alignment:
Q  376 tgttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcccatgtgaacaaacaccct 457  Q
    ||||||||| |||||||||| | | ||  |||||||| |||||||||||  |||||| |||||||||||||||| |||||||    
T  7819104 tgttcttcacttaatctaatcattgaatctaactttcgcatggtgggaaaagattaatctttcccatgtgaacacacaccct 7819185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 376 - 449
Target Start/End: Original strand, 16880525 - 16880598
Alignment:
Q  376 tgttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcccatgtgaaca 449  Q
    ||||||||| |||||||||| | | ||  |||||||| ||||||||||| ||||||| ||||||||||||||||    
T  16880525 tgttcttcacttaatctaatcattgaatctaactttcacatggtgggaaaggattaatctttcccatgtgaaca 16880598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 406 - 455
Target Start/End: Original strand, 30116033 - 30116082
Alignment:
Q  406 aactttcccatggtgggaatggattaacctttcccatgtgaacaaacacc 455  Q
    |||||||||||||||| || |||||||||||||||||||||||| |||||    
T  30116033 aactttcccatggtggaaaaggattaacctttcccatgtgaacacacacc 30116082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 406 - 447
Target Start/End: Complemental strand, 35237308 - 35237267
Alignment:
Q  406 aactttcccatggtgggaatggattaacctttcccatgtgaa 447  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  35237308 aactttcccatggtgggaaaggattaacctttcccatgtgaa 35237267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 496 - 539
Target Start/End: Original strand, 7219491 - 7219534
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| |||||||||||||||||||    
T  7219491 cttaaagagctttattttaactttgttttaaagtagcttttaga 7219534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 496 - 539
Target Start/End: Complemental strand, 14449570 - 14449527
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||||||||||||||||||||| |||||||||| ||||||||    
T  14449570 cttaaatagctttattttaactttgttttaaagtaacttttaga 14449527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 496 - 539
Target Start/End: Complemental strand, 16239129 - 16239086
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| |||||||||||||||||||    
T  16239129 cttaaagagctttattttaactttgttttaaagtagcttttaga 16239086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 496 - 539
Target Start/End: Complemental strand, 17045970 - 17045927
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| |||||||||||||||||||    
T  17045970 cttaaagagctttattttaactttgttttaaagtagcttttaga 17045927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 496 - 539
Target Start/End: Complemental strand, 17313502 - 17313459
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| |||||||||||||||||||    
T  17313502 cttaaagagctttattttaactttgttttaaagtagcttttaga 17313459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 496 - 539
Target Start/End: Original strand, 27467826 - 27467869
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| |||||||||||||||||||    
T  27467826 cttaaagagctttattttaactttgttttaaagtagcttttaga 27467869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 496 - 539
Target Start/End: Original strand, 34805903 - 34805946
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| |||||||||||||||||||    
T  34805903 cttaaagagctttattttaactttgttttaaagtagcttttaga 34805946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 496 - 539
Target Start/End: Original strand, 38139425 - 38139468
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| |||||||||||||||||||    
T  38139425 cttaaagagctttattttaactttgttttaaagtagcttttaga 38139468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 496 - 539
Target Start/End: Original strand, 39685535 - 39685578
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||||||||||| |||||||||||    
T  39685535 cttaaagagctttattttaactttattttaaaatagcttttaga 39685578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 376 - 447
Target Start/End: Complemental strand, 39852233 - 39852162
Alignment:
Q  376 tgttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcccatgtgaa 447  Q
    ||||||||| |||||||||| | | ||   ||||||||||||||||||| ||||||||||||||||| ||||    
T  39852233 tgttcttcacttaatctaatcattgaatcaaactttcccatggtgggaaaggattaacctttcccatttgaa 39852162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 496 - 539
Target Start/End: Original strand, 41361102 - 41361145
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| |||||||||||||||||||    
T  41361102 cttaaagagctttattttaactttgttttaaagtagcttttaga 41361145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 404 - 447
Target Start/End: Complemental strand, 41761850 - 41761807
Alignment:
Q  404 ttaactttcccatggtgggaatggattaacctttcccatgtgaa 447  Q
    |||||| |||||||||||||| ||||||||||||||||||||||    
T  41761850 ttaactgtcccatggtgggaaaggattaacctttcccatgtgaa 41761807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 496 - 539
Target Start/End: Original strand, 42844411 - 42844454
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| |||||||||||||||||||    
T  42844411 cttaaaaagctttattttaactttgttttaaagtagcttttaga 42844454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 376 - 455
Target Start/End: Original strand, 43481288 - 43481367
Alignment:
Q  376 tgttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcccatgtgaacaaacacc 455  Q
    ||||||||| |||||||||| | | ||   ||||||||||||||||||| ||||||||||||  |||||||||| |||||    
T  43481288 tgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttttcatgtgaacacacacc 43481367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 496 - 539
Target Start/End: Complemental strand, 43817925 - 43817882
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| |||||||||||||||||||    
T  43817925 cttaaagagctttattttaactttgttttaaagtagcttttaga 43817882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 496 - 539
Target Start/End: Original strand, 44908603 - 44908646
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| |||||||||||||||||||    
T  44908603 cttaaagagctttattttaactttgttttaaagtagcttttaga 44908646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 505 - 539
Target Start/End: Complemental strand, 169657 - 169623
Alignment:
Q  505 ctttattttaactttattttaaagtagcttttaga 539  Q
    |||||||||||||||||||||||||||||||||||    
T  169657 ctttattttaactttattttaaagtagcttttaga 169623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 504 - 542
Target Start/End: Original strand, 6816154 - 6816192
Alignment:
Q  504 gctttattttaactttattttaaagtagcttttagatcg 542  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  6816154 gctttattttaactttgttttaaagtagcttttagatcg 6816192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 496 - 542
Target Start/End: Original strand, 35004369 - 35004415
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttagatcg 542  Q
    |||||||| ||||||||||||||| ||||||||||| ||||||||||    
T  35004369 cttaaataactttattttaactttgttttaaagtagtttttagatcg 35004415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 503 - 536
Target Start/End: Complemental strand, 2184362 - 2184329
Alignment:
Q  503 agctttattttaactttattttaaagtagctttt 536  Q
    ||||||||||||||||||||||||||||||||||    
T  2184362 agctttattttaactttattttaaagtagctttt 2184329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 503 - 536
Target Start/End: Complemental strand, 2190597 - 2190564
Alignment:
Q  503 agctttattttaactttattttaaagtagctttt 536  Q
    ||||||||||||||||||||||||||||||||||    
T  2190597 agctttattttaactttattttaaagtagctttt 2190564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 406 - 447
Target Start/End: Original strand, 11999117 - 11999158
Alignment:
Q  406 aactttcccatggtgggaatggattaacctttcccatgtgaa 447  Q
    |||||||||||||||||||  |||||||||||||||||||||    
T  11999117 aactttcccatggtgggaaatgattaacctttcccatgtgaa 11999158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 376 - 449
Target Start/End: Original strand, 35237871 - 35237943
Alignment:
Q  376 tgttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcccatgtgaaca 449  Q
    ||||||||| |||||||||| | | || | |||||| | |||||||||| ||||||||||||||||||||||||    
T  35237871 tgttcttcacttaatctaattattgaa-tcaacttttctatggtgggaaaggattaacctttcccatgtgaaca 35237943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 496 - 537
Target Start/End: Complemental strand, 45139012 - 45138971
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagctttta 537  Q
    |||||| ||||||||||||||||| |||||||||||||||||    
T  45139012 cttaaagagctttattttaactttgttttaaagtagctttta 45138971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 497 - 541
Target Start/End: Complemental strand, 1877540 - 1877496
Alignment:
Q  497 ttaaatagctttattttaactttattttaaagtagcttttagatc 541  Q
    ||||| |||||||||||| |||||||||||||||||||| |||||    
T  1877540 ttaaagagctttattttatctttattttaaagtagctttaagatc 1877496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 415 - 455
Target Start/End: Original strand, 37533323 - 37533363
Alignment:
Q  415 atggtgggaatggattaacctttcccatgtgaacaaacacc 455  Q
    |||||||||| |||||||||||||||||||||||| |||||    
T  37533323 atggtgggaaaggattaacctttcccatgtgaacacacacc 37533363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 503 - 539
Target Start/End: Original strand, 39525571 - 39525607
Alignment:
Q  503 agctttattttaactttattttaaagtagcttttaga 539  Q
    ||||||||||||||||| |||||||||||||||||||    
T  39525571 agctttattttaactttgttttaaagtagcttttaga 39525607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 496 - 539
Target Start/End: Complemental strand, 12261431 - 12261388
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| | ||||||||||||||||||||||||||| |||||||    
T  12261431 cttaaagaactttattttaactttattttaaagtagtttttaga 12261388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 496 - 539
Target Start/End: Original strand, 16845140 - 16845183
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| | ||||||||||||||| |||||||||||||||||||    
T  16845140 cttaaagaactttattttaactttgttttaaagtagcttttaga 16845183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 376 - 455
Target Start/End: Original strand, 16889835 - 16889913
Alignment:
Q  376 tgttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcccatgtgaacaaacacc 455  Q
    ||||||||| |||||||||| | | ||   |||||||||||||||||||  |||||||| |||||||||||||| |||||    
T  16889835 tgttcttcacttaatctaataattgaatccaactttcccatggtgggaaatgattaacc-ttcccatgtgaacacacacc 16889913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 376 - 455
Target Start/End: Original strand, 36848204 - 36848283
Alignment:
Q  376 tgttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcccatgtgaacaaacacc 455  Q
    ||||||||| |||||||||| | | ||   |||||| ||||||||| || ||||||| |||||||||||||||| |||||    
T  36848204 tgttcttcacttaatctaatcattgaatccaacttttccatggtggaaaaggattaagctttcccatgtgaacacacacc 36848283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 496 - 539
Target Start/End: Complemental strand, 38137680 - 38137637
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| || |||||||||||||| |||||||||||||||||||    
T  38137680 cttaaagagttttattttaactttgttttaaagtagcttttaga 38137637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 496 - 539
Target Start/End: Complemental strand, 39485988 - 39485945
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| |||||||||||| ||||||    
T  39485988 cttaaagagctttattttaactttgttttaaagtagcctttaga 39485945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 378 - 457
Target Start/End: Original strand, 39852812 - 39852891
Alignment:
Q  378 ttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcccatgtgaacaaacaccct 457  Q
    ||||||| |||||||||| | | ||  |||||||   |||||||||| ||||||||||||| |||||||||| |||||||    
T  39852812 ttcttcacttaatctaataattgaatctaacttttttatggtgggaaaggattaacctttctcatgtgaacacacaccct 39852891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 496 - 539
Target Start/End: Complemental strand, 40048637 - 40048594
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| | ||||||||||||||||||||||| |||||||||||    
T  40048637 cttaaagaactttattttaactttattttaaaatagcttttaga 40048594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 620 - 655
Target Start/End: Complemental strand, 40864029 - 40863994
Alignment:
Q  620 acgcagtactaagaaaaggattgaaaatcatgttaa 655  Q
    |||||| |||||||||||||||||||||||||||||    
T  40864029 acgcaggactaagaaaaggattgaaaatcatgttaa 40863994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 496 - 539
Target Start/End: Original strand, 41526421 - 41526464
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| |||||||||||||| ||||    
T  41526421 cttaaagagctttattttaactttgttttaaagtagcttctaga 41526464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 376 - 447
Target Start/End: Original strand, 43591623 - 43591694
Alignment:
Q  376 tgttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcccatgtgaa 447  Q
    ||||||||| |||||||||| | | |   ||||||||||||||||||||   ||||||||||||||||||||    
T  43591623 tgttcttcacttaatctaatcattgactctaactttcccatggtgggaaataattaacctttcccatgtgaa 43591694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 376 - 455
Target Start/End: Complemental strand, 44062064 - 44061985
Alignment:
Q  376 tgttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcccatgtgaacaaacacc 455  Q
    ||||||||| |||||||||| | | ||   |||||||||||||| |||| | ||||||||||| |||||||||| |||||    
T  44062064 tgttcttcacttaatctaatcattgaatccaactttcccatggttggaaagtattaacctttctcatgtgaacacacacc 44061985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 497 - 539
Target Start/End: Original strand, 11579305 - 11579347
Alignment:
Q  497 ttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    ||||| || |||||||||||||| |||||||||||||||||||    
T  11579305 ttaaaaaggtttattttaactttgttttaaagtagcttttaga 11579347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 505 - 539
Target Start/End: Original strand, 27748957 - 27748991
Alignment:
Q  505 ctttattttaactttattttaaagtagcttttaga 539  Q
    |||||||||||||||||||||||| ||||||||||    
T  27748957 ctttattttaactttattttaaaggagcttttaga 27748991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 287 - 339
Target Start/End: Original strand, 9484854 - 9484907
Alignment:
Q  287 gatgttgctg-tggtggggagtaagaagagagaatggtggtggaaggtgtaaaa 339  Q
    |||||||||| |||||||||| ||| ||||||||  ||||||||||||||||||    
T  9484854 gatgttgctggtggtggggaggaaggagagagaagagtggtggaaggtgtaaaa 9484907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 406 - 447
Target Start/End: Original strand, 10806474 - 10806515
Alignment:
Q  406 aactttcccatggtgggaatggattaacctttcccatgtgaa 447  Q
    |||||||||||||| ||||  |||||||||||||||||||||    
T  10806474 aactttcccatggtaggaaaagattaacctttcccatgtgaa 10806515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 506 - 539
Target Start/End: Original strand, 11924890 - 11924923
Alignment:
Q  506 tttattttaactttattttaaagtagcttttaga 539  Q
    |||||||||||||| |||||||||||||||||||    
T  11924890 tttattttaactttgttttaaagtagcttttaga 11924923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 506 - 539
Target Start/End: Original strand, 15310522 - 15310555
Alignment:
Q  506 tttattttaactttattttaaagtagcttttaga 539  Q
    |||| |||||||||||||||||||||||||||||    
T  15310522 tttagtttaactttattttaaagtagcttttaga 15310555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 506 - 539
Target Start/End: Original strand, 15490891 - 15490924
Alignment:
Q  506 tttattttaactttattttaaagtagcttttaga 539  Q
    |||| |||||||||||||||||||||||||||||    
T  15490891 tttagtttaactttattttaaagtagcttttaga 15490924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 505 - 542
Target Start/End: Complemental strand, 22947678 - 22947641
Alignment:
Q  505 ctttattttaactttattttaaagtagcttttagatcg 542  Q
    ||||||||||||||| |||||||||| |||||||||||    
T  22947678 ctttattttaactttgttttaaagtaacttttagatcg 22947641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 496 - 537
Target Start/End: Original strand, 24511638 - 24511679
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagctttta 537  Q
    |||||| | ||||||||||||||| |||||||||||||||||    
T  24511638 cttaaagatctttattttaactttgttttaaagtagctttta 24511679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 506 - 539
Target Start/End: Original strand, 29868613 - 29868646
Alignment:
Q  506 tttattttaactttattttaaagtagcttttaga 539  Q
    |||||||||||||||||||||||||||| |||||    
T  29868613 tttattttaactttattttaaagtagctattaga 29868646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 414 - 447
Target Start/End: Complemental strand, 37532617 - 37532584
Alignment:
Q  414 catggtgggaatggattaacctttcccatgtgaa 447  Q
    ||||||||||| ||||||||||||||||||||||    
T  37532617 catggtgggaaaggattaacctttcccatgtgaa 37532584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 271; Significance: 1e-151; HSPs: 77)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 7 - 356
Target Start/End: Original strand, 52720907 - 52721257
Alignment:
Q  7 atcaaatagcaacaaaaatataatttttagtactgtatttcaacaagtgctcatttctaatactcaatctatacaccaacccttcaaaccttttatatat 106  Q
    |||||||||||||||||||| ||| | |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||     
T  52720907 atcaaatagcaacaaaaatagaatctctagtactgtatttcaacaagtgttcacttctaatactcaatctatacaccaacccttcaaaccttttatatac 52721006  T
Q  107 agtgattagtcatatctctcctataaaacatcaacacagtacacagaagcacacattggacaggagtgagaccaacacatgagcatgtaatagtttaaca 206  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  52721007 agtgattagtcatatctctcctataaaacaccaacacagtacacagaagcacacattggacacgagtgagaccaacacataagcatgtaatagtttaaca 52721106  T
Q  207 aattaaacgggtctcttgattttttaatcaagaagtataagatcaatttttacagcttatgaaatttttacaggttgtttgatgttgctgtggtggggag 306  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  52721107 aattaaatgggtctcttgattttttaatcaagaagtataagatcaatttttacagcttatggaatttttacgggttgtttgatgttgctgtggtggggag 52721206  T
Q  307 taagaagagagaatggtggtggaaggt-gtaaaagaaataatctagtgttg 356  Q
     ||| |||||||| |||||| |||||| | |||||||||||| ||||||||    
T  52721207 gaaggagagagaagggtggttgaaggtggaaaaagaaataatttagtgttg 52721257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 313 - 455
Target Start/End: Complemental strand, 52869590 - 52869447
Alignment:
Q  313 gagagaatggtggtggaaggtgtaaaagaaataatctagtgttgaaagtgtaccatatgattgtgttcttcaat-taatctaatgactaaagttaacttt 411  Q
    ||||||| ||||||||||| ||||||||||||||| |||||||| |||||||  ||| ||| ||| |||| ||  | ||||||||  |||||| ||||||    
T  52869590 gagagaagggtggtggaagatgtaaaagaaataatatagtgttgcaagtgtatgataagatcgtgctctttaaaatgatctaatggttaaagtgaacttt 52869491  T
Q  412 cccatggtgggaatggattaacctttcccatgtgaacaaacacc 455  Q
    ||||||||||||| ||||| |||||||||||||||||| |||||    
T  52869490 cccatggtgggaaaggattcacctttcccatgtgaacacacacc 52869447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 374 - 455
Target Start/End: Original strand, 52722078 - 52722158
Alignment:
Q  374 tgtgttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcccatgtgaacaaacacc 455  Q
    |||||||||||||||||||||||  ||||||||||||| ||||| ||| || ||||||||||||||||||||||||||||||    
T  52722078 tgtgttcttcaattaatctaatggttaaagttaacttt-ccatgatggaaaaggattaacctttcccatgtgaacaaacacc 52722158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 376 - 455
Target Start/End: Complemental strand, 199078 - 198999
Alignment:
Q  376 tgttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcccatgtgaacaaacacc 455  Q
    ||||||||| |||||||||| | | || ||||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  199078 tgttcttcacttaatctaatcattgaatttaactttcccatggtgggaaaggattaacctttcccatgtgaacacacacc 198999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 312 - 402
Target Start/End: Original strand, 51288884 - 51288974
Alignment:
Q  312 agagagaatggtggtggaaggtgtaaaagaaataatctagtgttgaaagtgtaccatatgattgtgttcttcaattaatctaatgactaaa 402  Q
    ||||||||||||||||||||||||||||||||||||||| |||| ||| ||||  ||| |||||||||||   |||||||||||| |||||    
T  51288884 agagagaatggtggtggaaggtgtaaaagaaataatctaatgttaaaaatgtatgataagattgtgttctcagattaatctaatggctaaa 51288974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 406 - 457
Target Start/End: Complemental strand, 48090515 - 48090464
Alignment:
Q  406 aactttcccatggtgggaatggattaacctttcccatgtgaacaaacaccct 457  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  48090515 aactttcccatggtgggaatggattaacctttcccatgtgaacacacaccct 48090464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 296 - 447
Target Start/End: Complemental strand, 52720756 - 52720605
Alignment:
Q  296 gtggtggggagtaagaagagagaatggtggtggaaggtgtaaaagaaataatctagtgttgaaagtgtaccatatgattgtgttcttcaattaatctaat 395  Q
    ||||||||||| ||| ||||||||  |||| |||||||||| || ||  |||||||||||   ||||||  ||| |||||||||||  |||||||||||     
T  52720756 gtggtggggaggaaggagagagaagagtgggggaaggtgtataaaaacaaatctagtgttagtagtgtatgataagattgtgttctcaaattaatctaac 52720657  T
Q  396 gactaaagttaactttcccatggtgggaatggattaacctttcccatgtgaa 447  Q
     |||||||| |||||||| ||||||||||||  |||  | ||||||||||||    
T  52720656 cactaaagtaaactttcctatggtgggaatgttttataccttcccatgtgaa 52720605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 376 - 455
Target Start/End: Original strand, 389412 - 389491
Alignment:
Q  376 tgttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcccatgtgaacaaacacc 455  Q
    ||||||||| |||||||||| ||| ||   |||||| |||||||||||| |||||||||||||||||||||||| |||||    
T  389412 tgttcttcacttaatctaatcactgaatccaacttttccatggtgggaaaggattaacctttcccatgtgaacacacacc 389491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 376 - 455
Target Start/End: Complemental strand, 20075604 - 20075525
Alignment:
Q  376 tgttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcccatgtgaacaaacacc 455  Q
    ||||||||| |||||||||| | | ||   ||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  20075604 tgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtgaacacacacc 20075525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 376 - 455
Target Start/End: Complemental strand, 52597569 - 52597490
Alignment:
Q  376 tgttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcccatgtgaacaaacacc 455  Q
    ||||||||| |||||||||| | | ||  ||||||||||||||||||||  ||||||||||||||||||||||| |||||    
T  52597569 tgttcttcacttaatctaatcattgaatctaactttcccatggtgggaaaagattaacctttcccatgtgaacacacacc 52597490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 376 - 455
Target Start/End: Original strand, 55816457 - 55816536
Alignment:
Q  376 tgttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcccatgtgaacaaacacc 455  Q
    ||||||||| |||||||||| | | ||   ||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  55816457 tgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtgaacacacacc 55816536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 313 - 411
Target Start/End: Original strand, 52533345 - 52533443
Alignment:
Q  313 gagagaatggtggtggaaggtgtaaaagaaataatctagtgttgaaagtgtaccatatgattgtgttcttcaattaatctaatgactaaagttaacttt 411  Q
    |||||||| |||||| ||| ||||||| ||||||| |||||||| |||| ||  ||| ||||||||||||||||| ||||||||  |||||| ||||||    
T  52533345 gagagaatagtggtgaaagatgtaaaaaaaataatatagtgttggaagtctatgataagattgtgttcttcaattcatctaatggttaaagtgaacttt 52533443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 321 - 409
Target Start/End: Complemental strand, 29975753 - 29975665
Alignment:
Q  321 ggtggtggaaggtgtaaaagaaataatctagtgttgaaagtgtaccatatgattgtgttcttcaattaatctaatgactaaagttaact 409  Q
    |||||||||| | ||||||||||||||||| || ||| ||||||  ||| |||||||||||||||||||||| | ||| ||| ||||||    
T  29975753 ggtggtggaaagggtaaaagaaataatctaatgctgacagtgtatgataagattgtgttcttcaattaatctgacgaccaaaattaact 29975665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 376 - 447
Target Start/End: Original strand, 199233 - 199304
Alignment:
Q  376 tgttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcccatgtgaa 447  Q
    ||||||||| |||||||||| | | ||   ||||||||||||||||||| ||||||||||||||||||||||    
T  199233 tgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtgaa 199304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 408 - 455
Target Start/End: Complemental strand, 20422178 - 20422131
Alignment:
Q  408 ctttcccatggtgggaatggattaacctttcccatgtgaacaaacacc 455  Q
    ||||||||||||||||| |||||||||||||||||||||||| |||||    
T  20422178 ctttcccatggtgggaaaggattaacctttcccatgtgaacacacacc 20422131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 496 - 539
Target Start/End: Complemental strand, 24303765 - 24303722
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    ||||||| ||||||||||||||||||||||||||||||||||||    
T  24303765 cttaaatggctttattttaactttattttaaagtagcttttaga 24303722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 496 - 539
Target Start/End: Complemental strand, 32206555 - 32206512
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| |||||||||||||||||||||||||||||||||||||    
T  32206555 cttaaagagctttattttaactttattttaaagtagcttttaga 32206512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 496 - 539
Target Start/End: Original strand, 34663966 - 34664009
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| |||||||||||||||||||||||||||||||||||||    
T  34663966 cttaaagagctttattttaactttattttaaagtagcttttaga 34664009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 376 - 455
Target Start/End: Original strand, 36945230 - 36945309
Alignment:
Q  376 tgttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcccatgtgaacaaacacc 455  Q
    ||||||||| |||||||||| | | ||   |||||||||||||||| || |||||||||||||||||||||||| |||||    
T  36945230 tgttcttcacttaatctaatcattgaatccaactttcccatggtggaaaaggattaacctttcccatgtgaacacacacc 36945309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 376 - 455
Target Start/End: Original strand, 40345137 - 40345216
Alignment:
Q  376 tgttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcccatgtgaacaaacacc 455  Q
    ||||||||| |||||||||| | | ||  |||||||||||| |||||||  ||||||||||||||||||||||| |||||    
T  40345137 tgttcttcacttaatctaatcattgaatctaactttcccattgtgggaaaagattaacctttcccatgtgaacacacacc 40345216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 406 - 456
Target Start/End: Original strand, 12640623 - 12640673
Alignment:
Q  406 aactttcccatggtgggaatggattaacctttcccatgtgaacaaacaccc 456  Q
    ||||||||||||||||||| ||||||| |||||||||||||||| ||||||    
T  12640623 aactttcccatggtgggaaaggattaagctttcccatgtgaacacacaccc 12640673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 497 - 539
Target Start/End: Original strand, 18138452 - 18138494
Alignment:
Q  497 ttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    ||||| |||||||||||||||||||||||||||||||||||||    
T  18138452 ttaaagagctttattttaactttattttaaagtagcttttaga 18138494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 409 - 455
Target Start/End: Original strand, 36111256 - 36111302
Alignment:
Q  409 tttcccatggtgggaatggattaacctttcccatgtgaacaaacacc 455  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||    
T  36111256 tttcccatggtgggaaaggattaacctttcccatgtgaacacacacc 36111302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 497 - 539
Target Start/End: Original strand, 49125663 - 49125705
Alignment:
Q  497 ttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    ||||| |||||||||||||||||||||||||||||||||||||    
T  49125663 ttaaagagctttattttaactttattttaaagtagcttttaga 49125705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 406 - 447
Target Start/End: Complemental strand, 388802 - 388761
Alignment:
Q  406 aactttcccatggtgggaatggattaacctttcccatgtgaa 447  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  388802 aactttcccatggtgggaaaggattaacctttcccatgtgaa 388761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 331 - 455
Target Start/End: Original strand, 3221348 - 3221473
Alignment:
Q  331 ggtgtaaaagaaataatctagtgttgaaagtgtaccatatgattgtgttcttcaattaatctaatgactaaagttaa-ctttcccatggtgggaatggat 429  Q
    |||||||||||||||||||||||  || || ||| |||| || ||||||||| | || |||||| |  | ||  ||| ||||||||| ||||||| ||||    
T  3221348 ggtgtaaaagaaataatctagtgaggagagagtatcataagaatgtgttcttgatttgatctaaagggtcaatataaactttcccatcgtgggaaaggat 3221447  T
Q  430 taacctttcccatgtgaacaaacacc 455  Q
    | |||||||||||||||||| |||||    
T  3221448 tcacctttcccatgtgaacacacacc 3221473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 376 - 444
Target Start/End: Original strand, 25370399 - 25370467
Alignment:
Q  376 tgttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcccatgt 444  Q
    ||||||||| |||||||||| | | ||   ||||||||||||||||||| |||||||||||||||||||    
T  25370399 tgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgt 25370467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 496 - 539
Target Start/End: Original strand, 1166750 - 1166793
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| |||||||||||||||||||    
T  1166750 cttaaagagctttattttaactttgttttaaagtagcttttaga 1166793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 496 - 539
Target Start/End: Original strand, 1169232 - 1169275
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| |||||||||||||||||||    
T  1169232 cttaaagagctttattttaactttgttttaaagtagcttttaga 1169275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 376 - 447
Target Start/End: Original strand, 2713850 - 2713921
Alignment:
Q  376 tgttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcccatgtgaa 447  Q
    ||||||||| |||||||||| | | ||   |||||| |||||||||||| ||||||||||||||||||||||    
T  2713850 tgttcttcacttaatctaatcattgaatccaacttttccatggtgggaaaggattaacctttcccatgtgaa 2713921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 496 - 539
Target Start/End: Original strand, 7365908 - 7365951
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| |||||||||||||||||||    
T  7365908 cttaaagagctttattttaactttgttttaaagtagcttttaga 7365951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 496 - 539
Target Start/End: Complemental strand, 7400169 - 7400126
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| |||||||||||||||||||    
T  7400169 cttaaagagctttattttaactttgttttaaagtagcttttaga 7400126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 496 - 539
Target Start/End: Original strand, 8151313 - 8151356
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| |||||||||||||||||||    
T  8151313 cttaaagagctttattttaactttgttttaaagtagcttttaga 8151356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 496 - 539
Target Start/End: Original strand, 11200946 - 11200989
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| |||||||||||||||||||    
T  11200946 cttaaagagctttattttaactttgttttaaagtagcttttaga 11200989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 376 - 447
Target Start/End: Complemental strand, 12640044 - 12639973
Alignment:
Q  376 tgttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcccatgtgaa 447  Q
    ||||||||| |||||||||| | | ||   |||||||||||||||| || ||||||||||||||||||||||    
T  12640044 tgttcttcacttaatctaatcattgaatccaactttcccatggtggaaaaggattaacctttcccatgtgaa 12639973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 496 - 539
Target Start/End: Complemental strand, 13890955 - 13890912
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| |||||||||||||||||||    
T  13890955 cttaaagagctttattttaactttgttttaaagtagcttttaga 13890912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 496 - 539
Target Start/End: Original strand, 17976558 - 17976601
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| |||||||||||||||||||    
T  17976558 cttaaagagctttattttaactttgttttaaagtagcttttaga 17976601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 376 - 455
Target Start/End: Complemental strand, 26423838 - 26423759
Alignment:
Q  376 tgttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcccatgtgaacaaacacc 455  Q
    ||||||||| |||||||||| | | ||   ||||||  ||||||||||| |||||||||||||||||||||||| |||||    
T  26423838 tgttcttcacttaatctaatcattgaatccaactttttcatggtgggaaaggattaacctttcccatgtgaacacacacc 26423759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 496 - 539
Target Start/End: Complemental strand, 27288435 - 27288392
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| |||||||||||||||||||    
T  27288435 cttaaagagctttattttaactttgttttaaagtagcttttaga 27288392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 496 - 539
Target Start/End: Complemental strand, 28116795 - 28116752
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| |||||||||||||||||||    
T  28116795 cttaaagagctttattttaactttgttttaaagtagcttttaga 28116752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 376 - 455
Target Start/End: Original strand, 32902472 - 32902551
Alignment:
Q  376 tgttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcccatgtgaacaaacacc 455  Q
    ||||||||| |||||||||| | | || | |||||||||||||||||||   ||||||||||| |||||||||| |||||    
T  32902472 tgttcttcacttaatctaatcattgaattcaactttcccatggtgggaaaatattaacctttctcatgtgaacacacacc 32902551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 496 - 539
Target Start/End: Complemental strand, 36190020 - 36189977
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| |||||||||||||||||||    
T  36190020 cttaaagagctttattttaactttgttttaaagtagcttttaga 36189977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 496 - 539
Target Start/End: Original strand, 40951057 - 40951100
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| || ||||||||||||||||||||||||||||||||||    
T  40951057 cttaaagagttttattttaactttattttaaagtagcttttaga 40951100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 496 - 539
Target Start/End: Complemental strand, 46045762 - 46045719
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| |||||||||||||||||||    
T  46045762 cttaaaaagctttattttaactttgttttaaagtagcttttaga 46045719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 376 - 455
Target Start/End: Original strand, 48782081 - 48782160
Alignment:
Q  376 tgttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcccatgtgaacaaacacc 455  Q
    ||||||||| |||||||||| | | ||   ||||||||||||||| |||  ||||||||||||||||||||||| |||||    
T  48782081 tgttcttcacttaatctaatcattgaatccaactttcccatggtgcgaaatgattaacctttcccatgtgaacacacacc 48782160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 496 - 539
Target Start/End: Original strand, 53274741 - 53274784
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| |||||||||||||||||||    
T  53274741 cttaaagagctttattttaactttgttttaaagtagcttttaga 53274784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 376 - 447
Target Start/End: Complemental strand, 55815904 - 55815833
Alignment:
Q  376 tgttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcccatgtgaa 447  Q
    ||||||||| |||||||||| | | ||   ||||||||||| ||||||| ||||||||||||||||||||||    
T  55815904 tgttcttcacttaatctaatcattgaatccaactttcccatagtgggaaaggattaacctttcccatgtgaa 55815833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 497 - 539
Target Start/End: Complemental strand, 45019226 - 45019184
Alignment:
Q  497 ttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    ||||| ||||||||||||||||| |||||||||||||||||||    
T  45019226 ttaaagagctttattttaactttgttttaaagtagcttttaga 45019184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 321 - 442
Target Start/End: Complemental strand, 3220651 - 3220530
Alignment:
Q  321 ggtggtggaaggtgtaaaagaaataatctagtgttgaaagtgtaccatatgattgtgttcttcaattaatctaatgactaaagttaactttcccatggtg 420  Q
    ||||||||||| |||||||||||||||||||||| || || |||  ||| || ||||||||| | || |||||| |    || | |||||||| ||| ||    
T  3220651 ggtggtggaagatgtaaaagaaataatctagtgtggagagagtattataagaatgtgttcttgatttgatctaaaggtccaaataaactttcctatgatg 3220552  T
Q  421 ggaatggattaacctttcccat 442  Q
    |||| ||||| |||||||||||    
T  3220551 ggaaaggattcacctttcccat 3220530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 376 - 449
Target Start/End: Complemental strand, 25369862 - 25369789
Alignment:
Q  376 tgttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcccatgtgaaca 449  Q
    ||||||||| |||||||||| | | ||   ||||||||||| |||| || ||||||||||||||||||||||||    
T  25369862 tgttcttcacttaatctaatcattgaatccaactttcccatagtggaaaaggattaacctttcccatgtgaaca 25369789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 274 - 421
Target Start/End: Complemental strand, 51288068 - 51287920
Alignment:
Q  274 ttacaggttgtttgatgttgctg-tggtggggagtaagaagagagaatggtggtggaaggtgtaaaagaaataatctagtgttgaaagtgtaccatatga 372  Q
    ||||| |||||| |||||||||| |||| | ||  ||| |||||||| ||||||||||||||| | | ||||||| |||||||| |||  ||  ||| ||    
T  51288068 ttacatgttgttagatgttgctggtggtagagaagaaggagagagaagggtggtggaaggtgttaga-aaataatatagtgttggaagaatatgataaga 51287970  T
Q  373 ttgtgttcttcaattaat-ctaatgactaaagttaactttcccatggtgg 421  Q
    ||||||||||| ||| || ||||||| |||||| |||| ||| |||||||    
T  51287969 ttgtgttcttccattgatcctaatgattaaagtgaactgtcctatggtgg 51287920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 506 - 542
Target Start/End: Original strand, 22557087 - 22557123
Alignment:
Q  506 tttattttaactttattttaaagtagcttttagatcg 542  Q
    |||||||||||||||||||||||||| ||||||||||    
T  22557087 tttattttaactttattttaaagtagtttttagatcg 22557123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 503 - 539
Target Start/End: Complemental strand, 28361448 - 28361412
Alignment:
Q  503 agctttattttaactttattttaaagtagcttttaga 539  Q
    ||||||||||||||||| |||||||||||||||||||    
T  28361448 agctttattttaactttgttttaaagtagcttttaga 28361412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 407 - 447
Target Start/End: Original strand, 35428238 - 35428278
Alignment:
Q  407 actttcccatggtgggaatggattaacctttcccatgtgaa 447  Q
    |||||||||||||||||| ||||||||||||||||| ||||    
T  35428238 actttcccatggtgggaaaggattaacctttcccatctgaa 35428278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 496 - 539
Target Start/End: Original strand, 8848051 - 8848094
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| |||||||||||||| ||||    
T  8848051 cttaaagagctttattttaactttgttttaaagtagcttgtaga 8848094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 496 - 539
Target Start/End: Original strand, 17624775 - 17624818
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| | ||||||||||||||| |||||||||||||||||||    
T  17624775 cttaaagaactttattttaactttgttttaaagtagcttttaga 17624818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 496 - 539
Target Start/End: Original strand, 23628946 - 23628989
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| | ||||||||||||||| |||||||||||||||||||    
T  23628946 cttaaagaactttattttaactttgttttaaagtagcttttaga 23628989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 496 - 539
Target Start/End: Original strand, 26111493 - 26111536
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| | ||||||||||||||| |||||||||||||||||||    
T  26111493 cttaaagaactttattttaactttgttttaaagtagcttttaga 26111536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 376 - 447
Target Start/End: Complemental strand, 31876867 - 31876796
Alignment:
Q  376 tgttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcccatgtgaa 447  Q
    ||||||||| |||||||||| | | ||   |||||| ||||||||| || ||||||||||||||||||||||    
T  31876867 tgttcttcacttaatctaatcattgaatccaacttttccatggtggaaaaggattaacctttcccatgtgaa 31876796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 496 - 539
Target Start/End: Complemental strand, 32200679 - 32200636
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| ||||||| |||||||||||    
T  32200679 cttaaagagctttattttaactttgttttaaaatagcttttaga 32200636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 376 - 447
Target Start/End: Complemental strand, 33569799 - 33569728
Alignment:
Q  376 tgttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcccatgtgaa 447  Q
    ||||||||| |||||||||| | | ||   |||||| |||||||||||| ||||| ||||||||||||||||    
T  33569799 tgttcttcacttaatctaattattgaatccaacttttccatggtgggaaaggattgacctttcccatgtgaa 33569728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 409 - 456
Target Start/End: Complemental strand, 35427292 - 35427245
Alignment:
Q  409 tttcccatggtgggaatggattaacctttcccatgtgaacaaacaccc 456  Q
    |||||||||| || || |||||||||||||||||||||||| ||||||    
T  35427292 tttcccatggcggaaaaggattaacctttcccatgtgaacacacaccc 35427245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 496 - 539
Target Start/End: Original strand, 39651843 - 39651886
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| ||||||||||| |||||||    
T  39651843 cttaaagagctttattttaactttgttttaaagtagtttttaga 39651886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 376 - 447
Target Start/End: Complemental strand, 40847756 - 40847685
Alignment:
Q  376 tgttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcccatgtgaa 447  Q
    ||||||||| |||||||||| | | ||   ||||||| ||||||||||| |||||||||||| |||||||||    
T  40847756 tgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaaccttttccatgtgaa 40847685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 496 - 539
Target Start/End: Original strand, 40952131 - 40952174
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| | ||||||||||||||||||||||||||| |||||||    
T  40952131 cttaaaaaactttattttaactttattttaaagtagtttttaga 40952174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 376 - 447
Target Start/End: Original strand, 48091102 - 48091173
Alignment:
Q  376 tgttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcccatgtgaa 447  Q
    ||||||||| |||||||||| | | ||   |||||||||||||||||||  |||||||||||||||| ||||    
T  48091102 tgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaagattaacctttcccatatgaa 48091173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 496 - 539
Target Start/End: Original strand, 52620733 - 52620776
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| |||||||||| ||||||||    
T  52620733 cttaaagagctttattttaactttgttttaaagtaacttttaga 52620776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 496 - 539
Target Start/End: Complemental strand, 55208446 - 55208403
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| |||||||||| ||||||||    
T  55208446 cttaaagagctttattttaactttgttttaaagtaacttttaga 55208403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 496 - 539
Target Start/End: Original strand, 55991933 - 55991976
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| ||||||||||| |||||||    
T  55991933 cttaaagagctttattttaactttgttttaaagtagtttttaga 55991976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 496 - 542
Target Start/End: Complemental strand, 11966966 - 11966920
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttagatcg 542  Q
    |||||| || |||||||||||||| |||||||||| |||||||||||    
T  11966966 cttaaagagttttattttaactttgttttaaagtaacttttagatcg 11966920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 413 - 447
Target Start/End: Complemental strand, 18501781 - 18501747
Alignment:
Q  413 ccatggtgggaatggattaacctttcccatgtgaa 447  Q
    |||||||||||| ||||||||||||||||||||||    
T  18501781 ccatggtgggaaaggattaacctttcccatgtgaa 18501747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 497 - 539
Target Start/End: Original strand, 20681304 - 20681345
Alignment:
Q  497 ttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    ||||| |||||||||| ||||||||||||||||||||||||||    
T  20681304 ttaaagagctttattt-aactttattttaaagtagcttttaga 20681345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 505 - 539
Target Start/End: Original strand, 32139536 - 32139570
Alignment:
Q  505 ctttattttaactttattttaaagtagcttttaga 539  Q
    ||||||||||||||| |||||||||||||||||||    
T  32139536 ctttattttaactttgttttaaagtagcttttaga 32139570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 496 - 542
Target Start/End: Complemental strand, 34264593 - 34264547
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttagatcg 542  Q
    |||||| || |||||||||||||| | ||||||||||||||||||||    
T  34264593 cttaaagagttttattttaactttgtattaaagtagcttttagatcg 34264547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 505 - 539
Target Start/End: Original strand, 34664942 - 34664976
Alignment:
Q  505 ctttattttaactttattttaaagtagcttttaga 539  Q
    ||||||||||||||| |||||||||||||||||||    
T  34664942 ctttattttaactttgttttaaagtagcttttaga 34664976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 496 - 537
Target Start/End: Complemental strand, 346566 - 346525
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagctttta 537  Q
    |||||| ||||||||||| ||||| |||||||||||||||||    
T  346566 cttaaagagctttatttttactttgttttaaagtagctttta 346525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 406 - 447
Target Start/End: Original strand, 37567511 - 37567552
Alignment:
Q  406 aactttcccatggtgggaatggattaacctttcccatgtgaa 447  Q
    |||||||||||||||| || | ||||||||||||||||||||    
T  37567511 aactttcccatggtggaaaagtattaacctttcccatgtgaa 37567552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 141; Significance: 2e-73; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 141; E-Value: 2e-73
Query Start/End: Original strand, 287 - 446
Target Start/End: Original strand, 25074914 - 25075074
Alignment:
Q  287 gatgttgctg-tggtggggagtaagaagagagaatggtggtggaaggtgtaaaagaaataatctagtgttgaaagtgtaccatatgattgtgttcttcaa 385  Q
    |||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25074914 gatgttgctggtggtggggaggaagaagagagaatggtggtggaaggtgtaaaagaaataatctagtgttgaaagtgtaccatatgattgtgttcttcaa 25075013  T
Q  386 ttaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcccatgtga 446  Q
    ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  25075014 ttaatctaatggctaaagttaactttcccatggtgggaaaggattaacctttcccatgtga 25075074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 141; E-Value: 2e-73
Query Start/End: Original strand, 287 - 446
Target Start/End: Original strand, 25132883 - 25133043
Alignment:
Q  287 gatgttgctg-tggtggggagtaagaagagagaatggtggtggaaggtgtaaaagaaataatctagtgttgaaagtgtaccatatgattgtgttcttcaa 385  Q
    |||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25132883 gatgttgctggtggtggggaggaagaagagagaatggtggtggaaggtgtaaaagaaataatctagtgttgaaagtgtaccatatgattgtgttcttcaa 25132982  T
Q  386 ttaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcccatgtga 446  Q
    ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  25132983 ttaatctaatggctaaagttaactttcccatggtgggaaaggattaacctttcccatgtga 25133043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 102; E-Value: 4e-50
Query Start/End: Original strand, 287 - 447
Target Start/End: Complemental strand, 25074452 - 25074291
Alignment:
Q  287 gatgttgctg-tggtggggagtaagaagagagaatggtggtggaaggtgtaaaagaaataatctagtgttgaaagtgtaccatatgattgtgttcttcaa 385  Q
    |||||||||| |||||| ||| ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  25074452 gatgttgctgatggtggagaggaaggagagagaatggtggtggaaggtgtaaaagaaataatctagtgttggaagtgtgccatatgattgtgttcttcaa 25074353  T
Q  386 ttaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcccatgtgaa 447  Q
    |||||||||||  |||| |||||||||||||||||| ||  |||||||| || |||||||||    
T  25074352 ttaatctaatggttaaatttaactttcccatggtggaaaaagattaaccatttccatgtgaa 25074291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 102; E-Value: 4e-50
Query Start/End: Original strand, 287 - 447
Target Start/End: Complemental strand, 25132421 - 25132260
Alignment:
Q  287 gatgttgctg-tggtggggagtaagaagagagaatggtggtggaaggtgtaaaagaaataatctagtgttgaaagtgtaccatatgattgtgttcttcaa 385  Q
    |||||||||| |||||| ||| ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  25132421 gatgttgctgatggtggagaggaaggagagagaatggtggtggaaggtgtaaaagaaataatctagtgttggaagtgtgccatatgattgtgttcttcaa 25132322  T
Q  386 ttaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcccatgtgaa 447  Q
    |||||||||||  |||| |||||||||||||||||| ||  |||||||| || |||||||||    
T  25132321 ttaatctaatggttaaatttaactttcccatggtggaaaaagattaaccatttccatgtgaa 25132260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 278 - 424
Target Start/End: Complemental strand, 3136101 - 3135954
Alignment:
Q  278 aggttgtttgatgttgctg-tggtggggagtaagaagagagaatggtggtggaaggtgtaaaagaaataatctagtgttgaaagtgtaccatatgattgt 376  Q
    |||||||||||||||| || |||||||||| ||| |||||||| |||||||||||||||||||||||||||| ||||||  |||||||  ||| ||| ||    
T  3136101 aggttgtttgatgttggtggtggtggggaggaaggagagagaagggtggtggaaggtgtaaaagaaataatccagtgttacaagtgtatgataagatggt 3136002  T
Q  377 gttcttcaattaatctaatgactaaagttaactttcccatggtgggaa 424  Q
    ||| |  |||||||||| || ||||| | |||||||||||||||||||    
T  3136001 gttttcaaattaatctagtggctaaaataaactttcccatggtgggaa 3135954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 313 - 455
Target Start/End: Complemental strand, 39148911 - 39148768
Alignment:
Q  313 gagagaatggtggtggaaggtgtaaaagaaataatctagtgttgaaagtgtaccatatgattgtgttcttc-aattaatctaatgactaaagttaacttt 411  Q
    ||||||| ||||||||||| ||||||||||||||| |||||||| |||||||  ||| ||| ||  ||||| || | ||||||||  |||||| ||||||    
T  39148911 gagagaagggtggtggaagatgtaaaagaaataatatagtgttgcaagtgtataataagatcgtactcttcaaaatgatctaatggttaaagtgaacttt 39148812  T
Q  412 cccatggtgggaatggattaacctttcccatgtgaacaaacacc 455  Q
    |||||||||| || | ||| ||||||||||| |||||| |||||    
T  39148811 cccatggtggaaaagaattcacctttcccatatgaacacacacc 39148768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 296 - 394
Target Start/End: Original strand, 3136427 - 3136525
Alignment:
Q  296 gtggtggggagtaagaagagagaatggtggtggaaggtgtaaaagaaataatctagtgttgaaagtgtaccatatgattgtgttcttcaattaatctaa 394  Q
    ||||||||||| ||| |||||||| |||||||||||||||||||||||||||  ||||||| |||||||  |||  ||||||||||  |||||||||||    
T  3136427 gtggtggggaggaaggagagagaaaggtggtggaaggtgtaaaagaaataattcagtgttggaagtgtatgataaaattgtgttctcaaattaatctaa 3136525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 332 - 455
Target Start/End: Original strand, 38064826 - 38064949
Alignment:
Q  332 gtgtaaaagaaataatctagtgttgaaagtgtaccatatgattgtgttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggatta 431  Q
    |||||||||||||||| ||||||||  ||||||  ||| ||||||  |||||||||||||||||| ||||| | ||  |||||||| ||| || |  ||     
T  38064826 gtgtaaaagaaataatatagtgttgggagtgtatgataagattgtactcttcaattaatctaatggctaaaatgaatcttcccatgatggaaaagttttc 38064925  T
Q  432 acctttcccatgtgaacaaacacc 455  Q
    |||||||||||||||||| |||||    
T  38064926 acctttcccatgtgaacacacacc 38064949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 376 - 457
Target Start/End: Complemental strand, 26687579 - 26687498
Alignment:
Q  376 tgttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcccatgtgaacaaacaccct 457  Q
    ||||||||| |||||||||| | | ||  ||||||||||||||| | || |||||||||||||||||||||||| |||||||    
T  26687579 tgttcttcacttaatctaatcattgaatctaactttcccatggtagaaaaggattaacctttcccatgtgaacacacaccct 26687498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 376 - 457
Target Start/End: Complemental strand, 26957310 - 26957229
Alignment:
Q  376 tgttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcccatgtgaacaaacaccct 457  Q
    ||||||||| |||||||||| | | ||  ||||||||||||||| | || |||||||||||||||||||||||| |||||||    
T  26957310 tgttcttcacttaatctaatcattgaatctaactttcccatggtagaaaaggattaacctttcccatgtgaacacacaccct 26957229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 376 - 447
Target Start/End: Complemental strand, 3957579 - 3957508
Alignment:
Q  376 tgttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcccatgtgaa 447  Q
    ||||||||| |||||||||| | | ||   ||||||||||||||||||| ||||||||||||||||||||||    
T  3957579 tgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtgaa 3957508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 496 - 539
Target Start/End: Original strand, 2530197 - 2530240
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| |||||||||||||||||||    
T  2530197 cttaaagagctttattttaactttgttttaaagtagcttttaga 2530240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 496 - 539
Target Start/End: Complemental strand, 3297786 - 3297743
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| |||||||||||||||||||    
T  3297786 cttaaagagctttattttaactttgttttaaagtagcttttaga 3297743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 496 - 539
Target Start/End: Complemental strand, 4374815 - 4374772
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| |||||||||||||||||||    
T  4374815 cttaaagagctttattttaactttgttttaaagtagcttttaga 4374772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 376 - 455
Target Start/End: Complemental strand, 4928950 - 4928871
Alignment:
Q  376 tgttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcccatgtgaacaaacacc 455  Q
    ||||||||| |||||||||| | ||||   |||||| | |||||||||| |||||||| ||||||||||||||| |||||    
T  4928950 tgttcttcacttaatctaatcattaaatccaacttttctatggtgggaaaggattaacttttcccatgtgaacacacacc 4928871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 496 - 539
Target Start/End: Original strand, 8314941 - 8314984
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| |||||||||||||||||||    
T  8314941 cttaaagagctttattttaactttgttttaaagtagcttttaga 8314984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 496 - 539
Target Start/End: Original strand, 10042908 - 10042951
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| |||||||||||||||||||    
T  10042908 cttaaagagctttattttaactttgttttaaagtagcttttaga 10042951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 496 - 539
Target Start/End: Original strand, 14205524 - 14205567
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| |||||||||||||||||||    
T  14205524 cttaaagagctttattttaactttgttttaaagtagcttttaga 14205567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 496 - 539
Target Start/End: Complemental strand, 16488089 - 16488046
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| | |||||||||||||||||||||||||||||||||||    
T  16488089 cttaaagaactttattttaactttattttaaagtagcttttaga 16488046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 496 - 539
Target Start/End: Complemental strand, 24027821 - 24027778
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| |||||||||||||||||||    
T  24027821 cttaaagagctttattttaactttgttttaaagtagcttttaga 24027778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 496 - 539
Target Start/End: Original strand, 24759093 - 24759136
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| |||||||||||||||||||    
T  24759093 cttaaagagctttattttaactttgttttaaagtagcttttaga 24759136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 496 - 539
Target Start/End: Original strand, 25821333 - 25821376
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| |||||||||||||||||||    
T  25821333 cttaaagagctttattttaactttgttttaaagtagcttttaga 25821376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 496 - 539
Target Start/End: Original strand, 42110800 - 42110843
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| | |||||||||||||||||||||||||||||||||||    
T  42110800 cttaaagaactttattttaactttattttaaagtagcttttaga 42110843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 406 - 447
Target Start/End: Original strand, 4929543 - 4929584
Alignment:
Q  406 aactttcccatggtgggaatggattaacctttcccatgtgaa 447  Q
    |||||||||||||||| || ||||||||||||||||||||||    
T  4929543 aactttcccatggtggaaaaggattaacctttcccatgtgaa 4929584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 496 - 541
Target Start/End: Original strand, 7536757 - 7536802
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttagatc 541  Q
    |||||| | ||||||||||||||| |||||||||||||||||||||    
T  7536757 cttaaagaactttattttaactttgttttaaagtagcttttagatc 7536802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 406 - 455
Target Start/End: Complemental strand, 21770043 - 21769994
Alignment:
Q  406 aactttcccatggtgggaatggattaacctttcccatgtgaacaaacacc 455  Q
    |||||||||||||||| || ||||||||||||||||| |||||| |||||    
T  21770043 aactttcccatggtggaaaaggattaacctttcccatatgaacacacacc 21769994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 506 - 539
Target Start/End: Complemental strand, 31884616 - 31884583
Alignment:
Q  506 tttattttaactttattttaaagtagcttttaga 539  Q
    ||||||||||||||||||||||||||||||||||    
T  31884616 tttattttaactttattttaaagtagcttttaga 31884583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 406 - 447
Target Start/End: Original strand, 39149468 - 39149509
Alignment:
Q  406 aactttcccatggtgggaatggattaacctttcccatgtgaa 447  Q
    ||||||||||||||||||| ||||| ||||||||||||||||    
T  39149468 aactttcccatggtgggaaaggattcacctttcccatgtgaa 39149509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 406 - 454
Target Start/End: Complemental strand, 8813126 - 8813078
Alignment:
Q  406 aactttcccatggtgggaatggattaacctttcccatgtgaacaaacac 454  Q
    ||||||||||||||||||  ||||||||||||||||| |||||| ||||    
T  8813126 aactttcccatggtgggagaggattaacctttcccatatgaacacacac 8813078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 503 - 539
Target Start/End: Complemental strand, 32261670 - 32261634
Alignment:
Q  503 agctttattttaactttattttaaagtagcttttaga 539  Q
    ||||||||||||||||| |||||||||||||||||||    
T  32261670 agctttattttaactttgttttaaagtagcttttaga 32261634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 503 - 539
Target Start/End: Original strand, 42322994 - 42323030
Alignment:
Q  503 agctttattttaactttattttaaagtagcttttaga 539  Q
    ||||||||||||||||| |||||||||||||||||||    
T  42322994 agctttattttaactttgttttaaagtagcttttaga 42323030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 496 - 539
Target Start/End: Complemental strand, 665522 - 665479
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||| ||| |||||||||||||||||||    
T  665522 cttaaagagctttattttaaatttgttttaaagtagcttttaga 665479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 496 - 539
Target Start/End: Complemental strand, 790023 - 789980
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| |||||||||| ||||||||    
T  790023 cttaaagagctttattttaactttgttttaaagtaccttttaga 789980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 496 - 539
Target Start/End: Original strand, 3246940 - 3246983
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| || |||||||||||||| |||||||||||||||||||    
T  3246940 cttaaagagttttattttaactttgttttaaagtagcttttaga 3246983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 496 - 539
Target Start/End: Complemental strand, 28746280 - 28746237
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| |||||||||| ||||||||    
T  28746280 cttaaagagctttattttaactttgttttaaagtaacttttaga 28746237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 496 - 539
Target Start/End: Complemental strand, 29383688 - 29383645
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| | ||||||||||||||| |||||||||||||||||||    
T  29383688 cttaaagacctttattttaactttgttttaaagtagcttttaga 29383645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 496 - 539
Target Start/End: Complemental strand, 30503492 - 30503449
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| || |||||||||||||| |||||||||||||||||||    
T  30503492 cttaaagagttttattttaactttgttttaaagtagcttttaga 30503449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 496 - 539
Target Start/End: Complemental strand, 30503719 - 30503676
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| ||||||||| |||||||||    
T  30503719 cttaaagagctttattttaactttgttttaaagttgcttttaga 30503676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 496 - 539
Target Start/End: Complemental strand, 30543835 - 30543792
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| || |||||||||||||| |||||||||||||||||||    
T  30543835 cttaaagagttttattttaactttgttttaaagtagcttttaga 30543792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 496 - 539
Target Start/End: Complemental strand, 30544062 - 30544019
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| ||||||||| |||||||||    
T  30544062 cttaaagagctttattttaactttgttttaaagttgcttttaga 30544019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 496 - 539
Target Start/End: Complemental strand, 31939795 - 31939752
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| | ||||||||||||||| |||||||||||||||||||    
T  31939795 cttaaagaactttattttaactttgttttaaagtagcttttaga 31939752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 504 - 539
Target Start/End: Original strand, 36083913 - 36083948
Alignment:
Q  504 gctttattttaactttattttaaagtagcttttaga 539  Q
    |||||||||||||||||||||||||||| |||||||    
T  36083913 gctttattttaactttattttaaagtagtttttaga 36083948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 504 - 539
Target Start/End: Original strand, 36088698 - 36088733
Alignment:
Q  504 gctttattttaactttattttaaagtagcttttaga 539  Q
    |||||||||||||||| |||||||||||||||||||    
T  36088698 gctttattttaactttgttttaaagtagcttttaga 36088733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 496 - 539
Target Start/End: Complemental strand, 42111771 - 42111728
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| | ||||||||||||||| |||||||||||||||||||    
T  42111771 cttaaagaactttattttaactttgttttaaagtagcttttaga 42111728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 504 - 539
Target Start/End: Original strand, 42416919 - 42416954
Alignment:
Q  504 gctttattttaactttattttaaagtagcttttaga 539  Q
    |||||||||||||||| |||||||||||||||||||    
T  42416919 gctttattttaactttgttttaaagtagcttttaga 42416954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 496 - 539
Target Start/End: Original strand, 43396634 - 43396677
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| ||||||||||| |||||||    
T  43396634 cttaaagagctttattttaactttgttttaaagtagtttttaga 43396677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 510 - 540
Target Start/End: Complemental strand, 29382552 - 29382522
Alignment:
Q  510 ttttaactttattttaaagtagcttttagat 540  Q
    |||||||||||||||||||||||||||||||    
T  29382552 ttttaactttattttaaagtagcttttagat 29382522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 376 - 449
Target Start/End: Original strand, 3958141 - 3958214
Alignment:
Q  376 tgttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcccatgtgaaca 449  Q
    ||||||||| |||||||||| | | ||   ||||||||  || |||||| ||||||||||||||||||||||||    
T  3958141 tgttcttcacttaatctaattattgaatcaaactttccattgatgggaaaggattaacctttcccatgtgaaca 3958214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 406 - 455
Target Start/End: Complemental strand, 5324353 - 5324304
Alignment:
Q  406 aactttcccatggtgggaatggattaacctttcccatgtgaacaaacacc 455  Q
    |||||||||||| | |||| ||||||| |||||||||||||||| |||||    
T  5324353 aactttcccatgataggaaaggattaagctttcccatgtgaacacacacc 5324304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 496 - 537
Target Start/End: Original strand, 39783070 - 39783111
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagctttta 537  Q
    |||||| | ||||||||||||||| |||||||||||||||||    
T  39783070 cttaaagaactttattttaactttgttttaaagtagctttta 39783111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 118; Significance: 1e-59; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 118; E-Value: 1e-59
Query Start/End: Original strand, 287 - 455
Target Start/End: Complemental strand, 2038765 - 2038596
Alignment:
Q  287 gatgttgctg-tggtggggagtaagaagagagaatggtggtggaaggtgtaaaagaaataatctagtgttgaaagtgtaccatatgattgtgttcttcaa 385  Q
    |||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||    
T  2038765 gatgttgctggtggtggggaggaagaagagagaatggtggtggaaggtgtaaaagaaataatctagtattgaaaatgtaccatatgattgtattcttcaa 2038666  T
Q  386 ttaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcccatgtgaacaaacacc 455  Q
    ||||||||||| || ||||||||||||||||||||||||  ||||||| ||||| ||| |||||||||||    
T  2038665 ttaatctaatggcttaagttaactttcccatggtgggaaatgattaacttttccgatgcgaacaaacacc 2038596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 338 - 439
Target Start/End: Original strand, 2039582 - 2039683
Alignment:
Q  338 aagaaataatctagtgttgaaagtgtaccatatgattgtgttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggattaaccttt 437  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||  ||||||||||||| | |||||| ||| | ||||||||||    
T  2039582 aagaaataatttagtgttggaagtgtaccatatgattgtgttcttcaattaatctaatggttaaagttaactttgctatggtgtgaaagaattaaccttt 2039681  T
Q  438 cc 439  Q
    ||    
T  2039682 cc 2039683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 376 - 455
Target Start/End: Complemental strand, 6032237 - 6032158
Alignment:
Q  376 tgttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcccatgtgaacaaacacc 455  Q
    ||||||||| |||||||||| | | ||   ||||||||||| ||||||| |||||||||||||||||||||||| |||||    
T  6032237 tgttcttcacttaatctaatcattgaatccaactttcccatagtgggaaaggattaacctttcccatgtgaacacacacc 6032158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 496 - 539
Target Start/End: Original strand, 32244489 - 32244532
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| |||||||||||||||||||||||||||||||||||||    
T  32244489 cttaaagagctttattttaactttattttaaagtagcttttaga 32244532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 405 - 447
Target Start/End: Original strand, 13936676 - 13936718
Alignment:
Q  405 taactttcccatggtgggaatggattaacctttcccatgtgaa 447  Q
    |||||||||||||||||||| ||||||||||||||||||||||    
T  13936676 taactttcccatggtgggaaaggattaacctttcccatgtgaa 13936718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 496 - 539
Target Start/End: Original strand, 7541217 - 7541260
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| |||||||||||||||||||    
T  7541217 cttaaagagctttattttaactttgttttaaagtagcttttaga 7541260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 496 - 539
Target Start/End: Original strand, 17505599 - 17505642
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| |||||||||||||||||||    
T  17505599 cttaaagagctttattttaactttgttttaaagtagcttttaga 17505642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 496 - 539
Target Start/End: Complemental strand, 18593571 - 18593528
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| |||||||||||||||||||    
T  18593571 cttaaagagctttattttaactttgttttaaagtagcttttaga 18593528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 496 - 539
Target Start/End: Complemental strand, 24046524 - 24046481
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    ||||||||| |||||||||||||| |||||||||||||||||||    
T  24046524 cttaaatagttttattttaactttgttttaaagtagcttttaga 24046481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 496 - 539
Target Start/End: Original strand, 28472335 - 28472378
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| |||||||||||||||||||    
T  28472335 cttaaagagctttattttaactttgttttaaagtagcttttaga 28472378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 496 - 539
Target Start/End: Original strand, 29859524 - 29859567
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| |||||||||||||||||||    
T  29859524 cttaaagagctttattttaactttgttttaaagtagcttttaga 29859567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 496 - 539
Target Start/End: Complemental strand, 34206973 - 34206930
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| |||||||||||||||||||    
T  34206973 cttaaaaagctttattttaactttgttttaaagtagcttttaga 34206930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 280 - 424
Target Start/End: Complemental strand, 1018741 - 1018596
Alignment:
Q  280 gttgtttgatgttgct-gtggtggggagtaagaagagagaatggtggtggaaggtgtaaaagaaataatctagtgttgaaagtgtaccatatgattgtgt 378  Q
    |||||||||||||||| || || | ||| ||| |||||||| ||||||||||||| | | | ||||||| |||||||| || ||||  ||| ||||||||    
T  1018741 gttgtttgatgttgcttgtagtagtgaggaaggagagagaagggtggtggaaggtattaga-aaataatatagtgttggaaatgtatgataagattgtgt 1018643  T
Q  379 tcttcaattaat-ctaatgactaaagttaactttcccatggtgggaa 424  Q
    ||||| |||||| |||||   |||||| || | ||||||||||||||    
T  1018642 tcttccattaatcctaatagttaaagtgaattgtcccatggtgggaa 1018596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 376 - 454
Target Start/End: Complemental strand, 5523279 - 5523201
Alignment:
Q  376 tgttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcccatgtgaacaaacac 454  Q
    ||||||||| |||||||||| | | ||   |||||||| ||||||| || |||||||||||||||||||||||| ||||    
T  5523279 tgttcttcacttaatctaatcattgaatccaactttcctatggtggaaaaggattaacctttcccatgtgaacacacac 5523201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 496 - 542
Target Start/End: Complemental strand, 33945781 - 33945735
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttagatcg 542  Q
    |||||| ||||||||||||||||| |||||||||| |||||||||||    
T  33945781 cttaaaaagctttattttaactttgttttaaagtatcttttagatcg 33945735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 313 - 346
Target Start/End: Original strand, 2039263 - 2039296
Alignment:
Q  313 gagagaatggtggtggaaggtgtaaaagaaataa 346  Q
    ||||||||||||||||||||||||||||||||||    
T  2039263 gagagaatggtggtggaaggtgtaaaagaaataa 2039296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 406 - 455
Target Start/End: Complemental strand, 12809118 - 12809069
Alignment:
Q  406 aactttcccatggtgggaatggattaacctttcccatgtgaacaaacacc 455  Q
    |||||||| || ||||||| |||||||||||||||||||||||| |||||    
T  12809118 aactttcctatagtgggaaaggattaacctttcccatgtgaacacacacc 12809069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 406 - 447
Target Start/End: Complemental strand, 33668270 - 33668229
Alignment:
Q  406 aactttcccatggtgggaatggattaacctttcccatgtgaa 447  Q
    |||||||||||||||||||  |||||||||||||||||||||    
T  33668270 aactttcccatggtgggaaatgattaacctttcccatgtgaa 33668229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 496 - 539
Target Start/End: Original strand, 559840 - 559883
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| |||||||||| ||||||||    
T  559840 cttaaagagctttattttaactttgttttaaagtaacttttaga 559883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 376 - 447
Target Start/End: Original strand, 5523853 - 5523924
Alignment:
Q  376 tgttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcccatgtgaa 447  Q
    ||||||||| |||||||||| | | ||   |||||||| ||||||||||  |||||||||||||||||||||    
T  5523853 tgttcttcacttaatctaatcattgaatcaaactttccaatggtgggaaaagattaacctttcccatgtgaa 5523924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 496 - 539
Target Start/End: Complemental strand, 6018535 - 6018492
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| |||||||||| ||||||||    
T  6018535 cttaaagagctttattttaactttgttttaaagtaacttttaga 6018492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 496 - 539
Target Start/End: Complemental strand, 10943111 - 10943068
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| ||||||||||| |||||||    
T  10943111 cttaaagagctttattttaactttgttttaaagtagattttaga 10943068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 376 - 447
Target Start/End: Original strand, 30611352 - 30611423
Alignment:
Q  376 tgttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcccatgtgaa 447  Q
    ||||||||| |||||||||| | | ||   ||||||||||||||||||| |||||||| |||| ||||||||    
T  30611352 tgttcttcagttaatctaatcattgaatccaactttcccatggtgggaaaggattaacatttctcatgtgaa 30611423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 496 - 539
Target Start/End: Complemental strand, 34247717 - 34247674
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| | ||||||||||||||| |||||||||||||||||||    
T  34247717 cttaaagaactttattttaactttgttttaaagtagcttttaga 34247674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 376 - 442
Target Start/End: Complemental strand, 31723912 - 31723846
Alignment:
Q  376 tgttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcccat 442  Q
    ||||||||| |||||||||| | ||||   || ||||||||||| |||| |||||||||||||||||    
T  31723912 tgttcttcacttaatctaatcattaaatccaaatttcccatggtaggaaaggattaacctttcccat 31723846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 496 - 537
Target Start/End: Original strand, 3850338 - 3850379
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagctttta 537  Q
    |||||| ||||||||||||||||| ||| |||||||||||||    
T  3850338 cttaaagagctttattttaactttgtttgaaagtagctttta 3850379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 376 - 449
Target Start/End: Complemental strand, 13944369 - 13944296
Alignment:
Q  376 tgttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcccatgtgaaca 449  Q
    ||||||||| |||||||||| | | || | |||||||||||| ||||||  |||||| ||||||||| ||||||    
T  13944369 tgttcttcatttaatctaatcattgaattcaactttcccatgatgggaaatgattaatctttcccatatgaaca 13944296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 505 - 542
Target Start/End: Original strand, 24162914 - 24162951
Alignment:
Q  505 ctttattttaactttattttaaagtagcttttagatcg 542  Q
    ||||||||||||||| ||||||||||| ||||||||||    
T  24162914 ctttattttaactttgttttaaagtagtttttagatcg 24162951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 81; Significance: 1e-37; HSPs: 67)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 296 - 424
Target Start/End: Original strand, 41639026 - 41639154
Alignment:
Q  296 gtggtggggagtaagaagagagaatggtggtggaaggtgtaaaagaaataatctagtgttgaaagtgtaccatatgattgtgttcttcaattaatctaat 395  Q
    ||||||||||| ||| |||||||| |||||||||||||||||||||||||||||||||||  |||||||||||| |||||||||||  ||||||||||||    
T  41639026 gtggtggggaggaaggagagagaagggtggtggaaggtgtaaaagaaataatctagtgttagaagtgtaccataagattgtgttctcaaattaatctaat 41639125  T
Q  396 gactaaagttaactttcccatggtgggaa 424  Q
    | ||||| | || ||||||||||||||||    
T  41639126 ggctaaaataaattttcccatggtgggaa 41639154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 321 - 455
Target Start/End: Complemental strand, 38279543 - 38279409
Alignment:
Q  321 ggtggtggaaggtgtaaaagaaataatctagtgttgaaagtgtaccatatgattgtgttcttcaattaatctaatgactaaagttaactttcccatggtg 420  Q
    |||||||||| | ||||||||||||||||| || ||   |||||  |||  ||||||||||||||||||||| | ||| ||| |||||||||||||||||    
T  38279543 ggtggtggaaagggtaaaagaaataatctaatgctggcggtgtatgataaaattgtgttcttcaattaatctgacgaccaaaattaactttcccatggtg 38279444  T
Q  421 ggaatggattaacctttcccatgtgaacaaacacc 455  Q
    |||| ||||| |||||||||||||||||| |||||    
T  38279443 ggaaaggattcacctttcccatgtgaacacacacc 38279409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 312 - 455
Target Start/End: Original strand, 37242899 - 37243042
Alignment:
Q  312 agagagaatggtggtggaaggtgtaaaagaaataatctagtgttgaaagtgtaccatatgattgtgttcttcaattaatctaatgactaaagttaacttt 411  Q
    |||||||| |||||||||||||||||||||||||||| ||||||  |||||||  ||| ||| ||||| |  ||||||||||||| |||||   || |||    
T  37242899 agagagaagggtggtggaaggtgtaaaagaaataatccagtgttacaagtgtatgataagatggtgttttcaaattaatctaatggctaaaacaaatttt 37242998  T
Q  412 cccatggtgggaatggattaacctttcccatgtgaacaaacacc 455  Q
    ||||||||||||| |  |||  | ||||||||||||||| ||||    
T  37242999 cccatggtgggaaggttttataccttcccatgtgaacaaccacc 37243042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 312 - 455
Target Start/End: Original strand, 1259611 - 1259754
Alignment:
Q  312 agagagaatggtggtggaaggtgtaaaagaaataatctagtgttgaaagtgtaccatatgattgtgttcttcaattaatctaatgactaaagttaacttt 411  Q
    |||||||| |||||||||||||||||||||||||||| ||||||  |||||||  ||| ||| ||||| |  ||||||||||||| |||||   || |||    
T  1259611 agagagaagggtggtggaaggtgtaaaagaaataatccagtgttacaagtgtatgataagatggtgttttcaaattaatctaatggctaaaacaaatttt 1259710  T
Q  412 cccatggtgggaatggattaacctttcccatgtgaacaaacacc 455  Q
    | ||||||||||| |  |||  | ||||||||||||||| ||||    
T  1259711 ctcatggtgggaaggttttataccttcccatgtgaacaaccacc 1259754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 376 - 449
Target Start/End: Original strand, 8427750 - 8427823
Alignment:
Q  376 tgttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcccatgtgaaca 449  Q
    ||||||||| |||||||||| | ||||  |||||||||||||||||||| ||||||||||| ||||||||||||    
T  8427750 tgttcttcacttaatctaatcattaaatctaactttcccatggtgggaaaggattaaccttccccatgtgaaca 8427823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 274 - 444
Target Start/End: Complemental strand, 46993505 - 46993332
Alignment:
Q  274 ttacaggttgtttgatgttgctg----tggtggggagtaagaagagagaatggtggtggaaggtgtaaaagaaataatctagtgttgaaagtgtaccata 369  Q
    |||||||||| |||||| |||||    |||||||||| ||| ||||| || ||||||||||||||||||| ||||||| |  ||||| || ||||  |||    
T  46993505 ttacaggttgcttgatgctgctggtggtggtggggaggaaggagagaaaagggtggtggaaggtgtaaaa-aaataatttgatgttggaaatgtatgata 46993407  T
Q  370 tgattgtgttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcccatgt 444  Q
     ||||||||||    |||||||||||| ||||||| |||||| |||||||||||| |  |||  |||||||||||    
T  46993406 agattgtgttcccagattaatctaatggctaaagtgaacttttccatggtgggaaagttttacactttcccatgt 46993332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 313 - 455
Target Start/End: Original strand, 41041198 - 41041341
Alignment:
Q  313 gagagaatggtggtggaaggtgtaaaagaaataatctagtgttgaaagtgtaccatatgattgtgttcttc-aattaatctaatgactaaagttaacttt 411  Q
    ||||||| ||||||||||| ||||||||||||||| ||||| || |||||||  ||| ||| ||| ||||| || | ||||||||  |||||  ||||||    
T  41041198 gagagaagggtggtggaagatgtaaaagaaataatatagtgctgcaagtgtatgataagatcgtgctcttcaaaatgatctaatggttaaagcgaacttt 41041297  T
Q  412 cccatggtgggaatggattaacctttcccatgtgaacaaacacc 455  Q
    |||||| | |||| ||||| |||||| | ||||||||| |||||    
T  41041298 cccatgataggaaaggattcaccttttctatgtgaacacacacc 41041341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 215 - 266
Target Start/End: Complemental strand, 46993762 - 46993711
Alignment:
Q  215 gggtctcttgattttttaatcaagaagtataagatcaatttttacagcttat 266  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  46993762 gggtcacttgattttttaatcaagaaggataagatcaatttttacagcttat 46993711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 376 - 455
Target Start/End: Complemental strand, 55281914 - 55281835
Alignment:
Q  376 tgttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcccatgtgaacaaacacc 455  Q
    ||||||||| |||||||||| | ||||   || |||||||||||||||| |||||||||||||||||||||||| |||||    
T  55281914 tgttcttcacttaatctaatcattaaatccaattttcccatggtgggaaaggattaacctttcccatgtgaacacacacc 55281835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 406 - 456
Target Start/End: Original strand, 25025801 - 25025851
Alignment:
Q  406 aactttcccatggtgggaatggattaacctttcccatgtgaacaaacaccc 456  Q
    ||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  25025801 aactttcccatggtgggaaaggattaacctttcccatgtgaacacacaccc 25025851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 312 - 424
Target Start/End: Complemental strand, 44445633 - 44445521
Alignment:
Q  312 agagagaatggtggtggaaggtgtaaaagaaataatctagtgttgaaagtgtaccatatgattgtgttcttcaattaat-ctaatgactaaagttaactt 410  Q
    |||||||| ||||||||||||||| | | ||||||| |||||||| |||||||  ||| ||||||||||||| ||| || ||||||  |||||| || ||    
T  44445633 agagagaagggtggtggaaggtgttaga-aaataatgtagtgttggaagtgtatgataagattgtgttcttccattgatcctaatggttaaagtgaattt 44445535  T
Q  411 tcccatggtgggaa 424  Q
    ||||||||||||||    
T  44445534 tcccatggtgggaa 44445521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 376 - 447
Target Start/End: Complemental strand, 3944974 - 3944903
Alignment:
Q  376 tgttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcccatgtgaa 447  Q
    ||||||||| |||||||||| | | ||   ||||||||||||||||||| ||||||||||||||||||||||    
T  3944974 tgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtgaa 3944903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 376 - 455
Target Start/End: Complemental strand, 29342420 - 29342341
Alignment:
Q  376 tgttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcccatgtgaacaaacacc 455  Q
    ||||||||| |||||||||| | | ||   |||||||||||||||||||  ||||||||||||||||||||||| |||||    
T  29342420 tgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaagattaacctttcccatgtgaacacacacc 29342341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 376 - 455
Target Start/End: Original strand, 44868625 - 44868704
Alignment:
Q  376 tgttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcccatgtgaacaaacacc 455  Q
    ||||||||| |||||||||| | | ||   || |||||||||||||||| |||||||||||||||||||||||| |||||    
T  44868625 tgttcttcacttaatctaatcattgaatcaaattttcccatggtgggaaaggattaacctttcccatgtgaacacacacc 44868704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 496 - 539
Target Start/End: Original strand, 50739267 - 50739310
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| |||||||||||||||||||||||||||||||||||||    
T  50739267 cttaaagagctttattttaactttattttaaagtagcttttaga 50739310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 496 - 539
Target Start/End: Complemental strand, 50773588 - 50773545
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| |||||||||||||||||||||||||||||||||||||    
T  50773588 cttaaagagctttattttaactttattttaaagtagcttttaga 50773545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 406 - 455
Target Start/End: Complemental strand, 23584286 - 23584237
Alignment:
Q  406 aactttcccatggtgggaatggattaacctttcccatgtgaacaaacacc 455  Q
    ||||||||||||||||||| |||||||||| ||||||||||||| |||||    
T  23584286 aactttcccatggtgggaaaggattaacctgtcccatgtgaacacacacc 23584237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 406 - 455
Target Start/End: Complemental strand, 23599109 - 23599060
Alignment:
Q  406 aactttcccatggtgggaatggattaacctttcccatgtgaacaaacacc 455  Q
    ||||||||||||||||||| |||||||||| ||||||||||||| |||||    
T  23599109 aactttcccatggtgggaaaggattaacctgtcccatgtgaacacacacc 23599060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 312 - 449
Target Start/End: Complemental strand, 34873108 - 34872971
Alignment:
Q  312 agagagaatggtggtggaaggtgtaaaagaaataatctagtgttgaaagtgtaccatatgattgtgttcttcaattaatctaatgactaaagttaacttt 411  Q
    |||||||| |||||||| ||||||||||||||||||  ||||||  |||||||  ||| ||| |||||    ||||||||||||| |||||   || |||    
T  34873108 agagagaagggtggtgggaggtgtaaaagaaataatacagtgttacaagtgtatgataagatggtgtttccaaattaatctaatggctaaaacaaatttt 34873009  T
Q  412 cccatggtgggaatggattaacctttcccatgtgaaca 449  Q
    ||||||||||||| |  |||  | ||||||||||||||    
T  34873008 cccatggtgggaaggttttataccttcccatgtgaaca 34872971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 406 - 455
Target Start/End: Complemental strand, 41459179 - 41459130
Alignment:
Q  406 aactttcccatggtgggaatggattaacctttcccatgtgaacaaacacc 455  Q
    ||||||| ||||||||||| |||||||||||||||||||||||| |||||    
T  41459179 aactttctcatggtgggaaaggattaacctttcccatgtgaacacacacc 41459130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 376 - 444
Target Start/End: Complemental strand, 32672245 - 32672177
Alignment:
Q  376 tgttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcccatgt 444  Q
    ||||||||| |||||||||| | ||||   |||||||||||| |||||| |||||||||||||||||||    
T  32672245 tgttcttcacttaatctaatcattaaatccaactttcccatgttgggaaaggattaacctttcccatgt 32672177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 496 - 539
Target Start/End: Original strand, 875880 - 875923
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| |||||||||||||||||||    
T  875880 cttaaagagctttattttaactttgttttaaagtagcttttaga 875923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 496 - 539
Target Start/End: Original strand, 4019031 - 4019074
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| |||||||||||||||||||    
T  4019031 cttaaagagctttattttaactttgttttaaagtagcttttaga 4019074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 496 - 539
Target Start/End: Original strand, 7040995 - 7041038
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| |||||||||||||||||||    
T  7040995 cttaaagagctttattttaactttgttttaaagtagcttttaga 7041038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 496 - 539
Target Start/End: Original strand, 7265169 - 7265212
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| |||||||||||||||||||    
T  7265169 cttaaagagctttattttaactttgttttaaagtagcttttaga 7265212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 496 - 539
Target Start/End: Complemental strand, 14587347 - 14587304
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| |||||||||||||||||||    
T  14587347 cttaaagagctttattttaactttgttttaaagtagcttttaga 14587304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 496 - 539
Target Start/End: Complemental strand, 15496431 - 15496388
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| |||||||||||||||||||    
T  15496431 cttaaagagctttattttaactttgttttaaagtagcttttaga 15496388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 496 - 539
Target Start/End: Complemental strand, 22347040 - 22346997
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| |||||||||||||||||||    
T  22347040 cttaaagagctttattttaactttgttttaaagtagcttttaga 22346997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 376 - 447
Target Start/End: Original strand, 23584890 - 23584961
Alignment:
Q  376 tgttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcccatgtgaa 447  Q
    ||||||||| |||||||||| | | ||   |||||| |||||||||||| ||||||||||||||||||||||    
T  23584890 tgttcttcacttaatctaatcattgaatccaactttaccatggtgggaaaggattaacctttcccatgtgaa 23584961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 376 - 447
Target Start/End: Original strand, 23599713 - 23599784
Alignment:
Q  376 tgttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcccatgtgaa 447  Q
    ||||||||| |||||||||| | | ||   |||||| |||||||||||| ||||||||||||||||||||||    
T  23599713 tgttcttcacttaatctaatcattgaatccaactttaccatggtgggaaaggattaacctttcccatgtgaa 23599784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 376 - 447
Target Start/End: Complemental strand, 25025253 - 25025182
Alignment:
Q  376 tgttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcccatgtgaa 447  Q
    ||||||||| |||||||||| | | ||   |||||||||||| |||||| ||||||||||||||||||||||    
T  25025253 tgttcttcacttaatctaatcattgaatcaaactttcccatgatgggaaaggattaacctttcccatgtgaa 25025182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 496 - 539
Target Start/End: Original strand, 26881734 - 26881777
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| |||||||||||||||||||    
T  26881734 cttaaagagctttattttaactttgttttaaagtagcttttaga 26881777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 496 - 539
Target Start/End: Original strand, 29500447 - 29500490
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| |||||||||||||||||||    
T  29500447 cttaaagagctttattttaactttgttttaaagtagcttttaga 29500490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 496 - 539
Target Start/End: Complemental strand, 30269044 - 30269001
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| |||||||||||||||||||    
T  30269044 cttaaagagctttattttaactttgttttaaagtagcttttaga 30269001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 496 - 539
Target Start/End: Complemental strand, 45599227 - 45599184
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| |||||||||||||||||||    
T  45599227 cttaaagagctttattttaactttgttttaaagtagcttttaga 45599184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 496 - 539
Target Start/End: Original strand, 47719597 - 47719640
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| |||||||||||||||||||    
T  47719597 cttaaagagctttattttaactttgttttaaagtagcttttaga 47719640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 496 - 539
Target Start/End: Original strand, 48961230 - 48961273
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| |||||||||||||||||||    
T  48961230 cttaaagagctttattttaactttgttttaaagtagcttttaga 48961273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 376 - 447
Target Start/End: Original strand, 50687715 - 50687786
Alignment:
Q  376 tgttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcccatgtgaa 447  Q
    ||||||||| |||||||||| | | ||   ||||||||||||||||||| | ||||||||||||||||||||    
T  50687715 tgttcttcacttaatctaatcattgaatcaaactttcccatggtgggaaagaattaacctttcccatgtgaa 50687786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 496 - 539
Target Start/End: Original strand, 52461142 - 52461185
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| |||||||||||||||||||    
T  52461142 cttaaagagctttattttaactttgttttaaagtagcttttaga 52461185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 496 - 539
Target Start/End: Original strand, 52674896 - 52674939
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| |||||||||||||||||||    
T  52674896 cttaaagagctttattttaactttgttttaaagtagcttttaga 52674939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 496 - 539
Target Start/End: Original strand, 53022780 - 53022823
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| |||||||||||||||||||    
T  53022780 cttaaagagctttattttaactttgttttaaagtagcttttaga 53022823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 496 - 539
Target Start/End: Complemental strand, 54203712 - 54203669
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| |||||||||||||||||||    
T  54203712 cttaaagagctttattttaactttgttttaaagtagcttttaga 54203669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 496 - 539
Target Start/End: Complemental strand, 54510348 - 54510305
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| |||||||||||||||||||    
T  54510348 cttaaagagctttattttaactttgttttaaagtagcttttaga 54510305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 496 - 539
Target Start/End: Original strand, 54741920 - 54741963
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| |||||||||||||||||||    
T  54741920 cttaaagagctttattttaactttgttttaaagtagcttttaga 54741963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 376 - 457
Target Start/End: Complemental strand, 31014416 - 31014335
Alignment:
Q  376 tgttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcccatgtgaacaaacaccct 457  Q
    ||||||||| |||||||||| | | ||   |||||||||||||||| || ||||||| ||||| |||||||||| |||||||    
T  31014416 tgttcttcacttaatctaatcattgaatccaactttcccatggtggaaaaggattaatctttctcatgtgaacacacaccct 31014335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 331 - 455
Target Start/End: Original strand, 46186957 - 46187082
Alignment:
Q  331 ggtgtaaaagaaataatctagtgttgaaagtgtaccatatgattgtgttcttcaattaatctaatgactaaagttaa-ctttcccatggtgggaatggat 429  Q
    ||||||||||||||||||||||| ||| || |||  ||| || ||||||||| | || |||||| |  | ||  ||| |||||| |||||| ||| ||||    
T  46186957 ggtgtaaaagaaataatctagtgatgagagagtattataagaatgtgttcttgatttgatctaaagggtcaatataaactttcctatggtgagaaaggat 46187056  T
Q  430 taacctttcccatgtgaacaaacacc 455  Q
    | |||||||||||||||||| |||||    
T  46187057 tcacctttcccatgtgaacacacacc 46187082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 496 - 537
Target Start/End: Original strand, 46757674 - 46757715
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagctttta 537  Q
    |||||| ||||||||||||||||| |||||||||||||||||    
T  46757674 cttaaaaagctttattttaactttgttttaaagtagctttta 46757715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 503 - 539
Target Start/End: Original strand, 2909555 - 2909591
Alignment:
Q  503 agctttattttaactttattttaaagtagcttttaga 539  Q
    ||||||||||||||||| |||||||||||||||||||    
T  2909555 agctttattttaactttgttttaaagtagcttttaga 2909591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 407 - 455
Target Start/End: Original strand, 19555964 - 19556012
Alignment:
Q  407 actttcccatggtgggaatggattaacctttcccatgtgaacaaacacc 455  Q
    ||||||||||| |||||| ||||||||||||| |||||||||| |||||    
T  19555964 actttcccatgatgggaaaggattaacctttctcatgtgaacacacacc 19556012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 505 - 537
Target Start/End: Complemental strand, 46088672 - 46088640
Alignment:
Q  505 ctttattttaactttattttaaagtagctttta 537  Q
    |||||||||||||||||||||||||||||||||    
T  46088672 ctttattttaactttattttaaagtagctttta 46088640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 406 - 454
Target Start/End: Complemental strand, 50674678 - 50674630
Alignment:
Q  406 aactttcccatggtgggaatggattaacctttcccatgtgaacaaacac 454  Q
    |||||||||||||||||||  |||||||||||| |||||||||| ||||    
T  50674678 aactttcccatggtgggaaaagattaacctttctcatgtgaacacacac 50674630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 504 - 539
Target Start/End: Complemental strand, 12101415 - 12101380
Alignment:
Q  504 gctttattttaactttattttaaagtagcttttaga 539  Q
    |||||||||||||||| |||||||||||||||||||    
T  12101415 gctttattttaactttgttttaaagtagcttttaga 12101380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 496 - 539
Target Start/End: Original strand, 29450774 - 29450817
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| | ||||||||||||||| |||||||||||||||||||    
T  29450774 cttaaagaactttattttaactttgttttaaagtagcttttaga 29450817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 504 - 539
Target Start/End: Complemental strand, 35529811 - 35529776
Alignment:
Q  504 gctttattttaactttattttaaagtagcttttaga 539  Q
    |||||||||||||||| |||||||||||||||||||    
T  35529811 gctttattttaactttgttttaaagtagcttttaga 35529776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 496 - 539
Target Start/End: Complemental strand, 36592177 - 36592134
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| || |||||||||||||| |||||||||||||||||||    
T  36592177 cttaaagagttttattttaactttgttttaaagtagcttttaga 36592134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 496 - 539
Target Start/End: Complemental strand, 36987700 - 36987657
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| ||||||||||| |||||||    
T  36987700 cttaaagagctttattttaactttgttttaaagtagtttttaga 36987657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 496 - 539
Target Start/End: Complemental strand, 37013139 - 37013096
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| ||||||||||| |||||||    
T  37013139 cttaaagagctttattttaactttgttttaaagtagtttttaga 37013096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 496 - 539
Target Start/End: Original strand, 39721372 - 39721415
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| ||||||||||| |||||||    
T  39721372 cttaaagagctttattttaactttgttttaaagtagtttttaga 39721415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 496 - 539
Target Start/End: Original strand, 48545224 - 48545267
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||| ||| |||||||||||||||||||    
T  48545224 cttaaagagctttattttaattttgttttaaagtagcttttaga 48545267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 376 - 447
Target Start/End: Original strand, 50675132 - 50675203
Alignment:
Q  376 tgttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcccatgtgaa 447  Q
    ||||||||| |||||||||| | | || | ||||||||||| |||  || ||||||||||||||||||||||    
T  50675132 tgttcttcacttaatctaatcattgaattcaactttcccattgtgaaaaaggattaacctttcccatgtgaa 50675203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 376 - 447
Target Start/End: Original strand, 55282428 - 55282498
Alignment:
Q  376 tgttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcccatgtgaa 447  Q
    ||||||||| |||||||||| | ||||   ||||||||||||||||||| ||||||| | ||||||||||||    
T  55282428 tgttcttcacttaatctaatcattaaatccaactttcccatggtgggaaaggattaaac-ttcccatgtgaa 55282498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 406 - 444
Target Start/End: Complemental strand, 37374014 - 37373976
Alignment:
Q  406 aactttcccatggtgggaatggattaacctttcccatgt 444  Q
    |||||||||||||||||||  ||||||||||||||||||    
T  37374014 aactttcccatggtgggaaaagattaacctttcccatgt 37373976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 505 - 539
Target Start/End: Complemental strand, 41990717 - 41990683
Alignment:
Q  505 ctttattttaactttattttaaagtagcttttaga 539  Q
    ||||||||||||||| |||||||||||||||||||    
T  41990717 ctttattttaactttgttttaaagtagcttttaga 41990683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 413 - 447
Target Start/End: Original strand, 53269392 - 53269426
Alignment:
Q  413 ccatggtgggaatggattaacctttcccatgtgaa 447  Q
    |||||||||||| ||||||||||||||||||||||    
T  53269392 ccatggtgggaaaggattaacctttcccatgtgaa 53269426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 406 - 455
Target Start/End: Original strand, 37375505 - 37375554
Alignment:
Q  406 aactttcccatggtgggaatggattaacctttcccatgtgaacaaacacc 455  Q
    |||||||  |||||||||| ||||||||||||||||||| |||| |||||    
T  37375505 aactttcttatggtgggaaaggattaacctttcccatgtaaacacacacc 37375554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 506 - 539
Target Start/End: Original strand, 38361874 - 38361907
Alignment:
Q  506 tttattttaactttattttaaagtagcttttaga 539  Q
    |||||||||||||| |||||||||||||||||||    
T  38361874 tttattttaactttgttttaaagtagcttttaga 38361907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 343 - 424
Target Start/End: Original strand, 55125263 - 55125344
Alignment:
Q  343 ataatctagtgttgaaagtgtaccatatgattgtgttcttcaattaatctaatgactaaagttaactttcccatggtgggaa 424  Q
    ||||||||||||||| ||||||||||| ||   ||||||| | |||||||||||  |||| || ||||| | ||||||||||    
T  55125263 ataatctagtgttgagagtgtaccataagacaatgttctttacttaatctaatggataaaatttacttttctatggtgggaa 55125344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 68; Significance: 7e-30; HSPs: 54)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 313 - 455
Target Start/End: Complemental strand, 84520 - 84377
Alignment:
Q  313 gagagaatggtggtggaaggtgtaaaagaaataatctagtgttgaaagtgtaccatatgattgtgttcttc-aattaatctaatgactaaagttaacttt 411  Q
    ||||||| ||||||||||| ||||||||||||||| |||||||| |||||||  ||| ||||||| ||||| || | ||||||||  |||||| ||||||    
T  84520 gagagaagggtggtggaagatgtaaaagaaataatatagtgttgcaagtgtatgataagattgtgctcttcaaaatgatctaatggttaaagtgaacttt 84421  T
Q  412 cccatggtgggaatggattaacctttcccatgtgaacaaacacc 455  Q
    ||||| ||||||| ||||| |||||||||||||||||| |||||    
T  84420 cccatagtgggaaaggattcacctttcccatgtgaacacacacc 84377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 332 - 455
Target Start/End: Complemental strand, 8464510 - 8464387
Alignment:
Q  332 gtgtaaaagaaataatctagtgttgaaagtgtaccatatgattgtgttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggatta 431  Q
    |||||||||||||||| ||||||||  ||||||  ||| ||||||  |||||||||||||||||| ||||||| ||  ||||||||||||||| |  ||     
T  8464510 gtgtaaaagaaataatatagtgttgggagtgtatgataagattgtactcttcaattaatctaatggctaaagtgaatcttcccatggtgggaaagttttc 8464411  T
Q  432 acctttcccatgtgaacaaacacc 455  Q
    ||||||||||| |||||| |||||    
T  8464410 acctttcccatatgaacacacacc 8464387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 323 - 424
Target Start/End: Complemental strand, 46251522 - 46251421
Alignment:
Q  323 tggtggaaggtgtaaaagaaataatctagtgttgaaagtgtaccatatgattgtgttcttcaattaatctaatgactaaagttaactttcccatggtggg 422  Q
    |||||||| |||||||||| ||||||||||| ||| ||||||  |||  |||||| |||| ||||||||||||| ||||| | |||||||||||||||||    
T  46251522 tggtggaaagtgtaaaagagataatctagtggtgagagtgtatgataatattgtgctctttaattaatctaatggctaaaatcaactttcccatggtggg 46251423  T
Q  423 aa 424  Q
    ||    
T  46251422 aa 46251421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 376 - 455
Target Start/End: Complemental strand, 34853470 - 34853391
Alignment:
Q  376 tgttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcccatgtgaacaaacacc 455  Q
    ||||||||| |||||||||| | | || | ||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  34853470 tgttcttcacttaatctaatcattgaattcaactttcccatggtgggaaaggattaacctttcccatgtgaacacacacc 34853391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 376 - 456
Target Start/End: Original strand, 24044050 - 24044130
Alignment:
Q  376 tgttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcccatgtgaacaaacaccc 456  Q
    ||||||||| |||||||||| | | ||   ||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  24044050 tgttcttcacttaatctaatcattgaataaaactttcccatggtgggaaaggattaacctttcccatgtgaacacacaccc 24044130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 376 - 454
Target Start/End: Original strand, 36683471 - 36683549
Alignment:
Q  376 tgttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcccatgtgaacaaacac 454  Q
    ||||||||| |||||||||| | | ||   ||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  36683471 tgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtgaacacacac 36683549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 406 - 455
Target Start/End: Complemental strand, 19816313 - 19816264
Alignment:
Q  406 aactttcccatggtgggaatggattaacctttcccatgtgaacaaacacc 455  Q
    ||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  19816313 aactttcccatggtgggaaaggattaacctttcccatgtgaacacacacc 19816264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 406 - 455
Target Start/End: Original strand, 42456553 - 42456602
Alignment:
Q  406 aactttcccatggtgggaatggattaacctttcccatgtgaacaaacacc 455  Q
    ||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  42456553 aactttcccatggtgggaaaggattaacctttcccatgtgaacacacacc 42456602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 376 - 456
Target Start/End: Original strand, 47814642 - 47814722
Alignment:
Q  376 tgttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcccatgtgaacaaacaccc 456  Q
    ||||||||| |||||||||| | | ||   ||||||||||||||||||| ||||||| |||||||||||||||| ||||||    
T  47814642 tgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaagctttcccatgtgaacacacaccc 47814722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 376 - 455
Target Start/End: Complemental strand, 46814484 - 46814405
Alignment:
Q  376 tgttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcccatgtgaacaaacacc 455  Q
    ||||||||| ||||||||||   | || | ||||||||||||||||||| ||||||||||||||||||| |||| |||||    
T  46814484 tgttcttcacttaatctaatcgttgaattcaactttcccatggtgggaaaggattaacctttcccatgtaaacacacacc 46814405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 376 - 444
Target Start/End: Original strand, 22276083 - 22276151
Alignment:
Q  376 tgttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcccatgt 444  Q
    ||||||||| |||||||||| | | ||   ||||||||||||||||||| |||||||||||||||||||    
T  22276083 tgttcttcatttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgt 22276151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 496 - 539
Target Start/End: Original strand, 4404403 - 4404446
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||||| ||||||||||||||| |||||||||||||||||||    
T  4404403 cttaaataactttattttaactttgttttaaagtagcttttaga 4404446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 496 - 539
Target Start/End: Complemental strand, 4406587 - 4406544
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| |||||||||||||||||||    
T  4406587 cttaaagagctttattttaactttgttttaaagtagcttttaga 4406544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 496 - 539
Target Start/End: Complemental strand, 4408002 - 4407959
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| |||||||||||||||||||    
T  4408002 cttaaagagctttattttaactttgttttaaagtagcttttaga 4407959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 376 - 439
Target Start/End: Complemental strand, 4894578 - 4894515
Alignment:
Q  376 tgttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcc 439  Q
    ||||||||| |||||||||| | | || | ||||||||||||||||||| ||||||||||||||    
T  4894578 tgttcttcacttaatctaatcattgaattcaactttcccatggtgggaaaggattaacctttcc 4894515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 496 - 539
Target Start/End: Original strand, 12908023 - 12908066
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| |||||||||||||||||||    
T  12908023 cttaaagagctttattttaactttgttttaaagtagcttttaga 12908066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 496 - 539
Target Start/End: Complemental strand, 18956260 - 18956217
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| |||||||||||||||||||    
T  18956260 cttaaagagctttattttaactttgttttaaagtagcttttaga 18956217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 376 - 455
Target Start/End: Complemental strand, 22275503 - 22275425
Alignment:
Q  376 tgttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcccatgtgaacaaacacc 455  Q
    ||||||||| |||||||||| | | || | |||||||||||||||||||  ||||||||||| ||||||||||| |||||    
T  22275503 tgttcttcacttaatctaatcattgaa-tcaactttcccatggtgggaaatgattaaccttttccatgtgaacacacacc 22275425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 496 - 539
Target Start/End: Original strand, 23154745 - 23154788
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||||| ||||||||||||||| |||||||||||||||||||    
T  23154745 cttaaataactttattttaactttgttttaaagtagcttttaga 23154788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 376 - 447
Target Start/End: Original strand, 34854003 - 34854074
Alignment:
Q  376 tgttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcccatgtgaa 447  Q
    ||||||||| |||||||||| | | |   ||||||||| |||||||||| ||||||||||||||||||||||    
T  34854003 tgttcttcacttaatctaatcattgactctaactttcctatggtgggaaaggattaacctttcccatgtgaa 34854074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 376 - 447
Target Start/End: Complemental strand, 36682914 - 36682843
Alignment:
Q  376 tgttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcccatgtgaa 447  Q
    ||||||||| |||||||||| | | ||   |||||||||||||||||||  |||||||||||||||||||||    
T  36682914 tgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaatgattaacctttcccatgtgaa 36682843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 496 - 539
Target Start/End: Complemental strand, 40035990 - 40035947
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| || ||||||||||||||||||||||||||||||||||    
T  40035990 cttaaagagttttattttaactttattttaaagtagcttttaga 40035947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 496 - 539
Target Start/End: Complemental strand, 40239857 - 40239814
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| |||||||||||||||||||    
T  40239857 cttaaagagctttattttaactttgttttaaagtagcttttaga 40239814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 496 - 539
Target Start/End: Original strand, 43156303 - 43156346
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| |||||||||||||||||||    
T  43156303 cttaaagagctttattttaactttgttttaaagtagcttttaga 43156346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 504 - 542
Target Start/End: Complemental strand, 20135040 - 20135002
Alignment:
Q  504 gctttattttaactttattttaaagtagcttttagatcg 542  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  20135040 gctttattttaactttgttttaaagtagcttttagatcg 20135002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 497 - 539
Target Start/End: Original strand, 37143542 - 37143584
Alignment:
Q  497 ttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    ||||| || ||||||||||||||||||||||||||||||||||    
T  37143542 ttaaagagttttattttaactttattttaaagtagcttttaga 37143584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 496 - 537
Target Start/End: Complemental strand, 4492397 - 4492356
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagctttta 537  Q
    |||||| ||||||||||||||||| |||||||||||||||||    
T  4492397 cttaaagagctttattttaactttgttttaaagtagctttta 4492356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 343 - 424
Target Start/End: Original strand, 12732776 - 12732857
Alignment:
Q  343 ataatctagtgttgaaagtgtaccatatgattgtgttcttcaattaatctaatgactaaagttaactttcccatggtgggaa 424  Q
    ||||||||||||||| ||||||||||| ||   ||||||| | |||||||||||  |||| || |||||| |||||||||||    
T  12732776 ataatctagtgttgagagtgtaccataagacaatgttctttacttaatctaatggataaaatttactttctcatggtgggaa 12732857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 406 - 455
Target Start/End: Original strand, 27856167 - 27856216
Alignment:
Q  406 aactttcccatggtgggaatggattaacctttcccatgtgaacaaacacc 455  Q
    |||||| ||||||||||||  ||||||||||||||||||||||| |||||    
T  27856167 aacttttccatggtgggaaatgattaacctttcccatgtgaacacacacc 27856216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 506 - 542
Target Start/End: Original strand, 5526226 - 5526262
Alignment:
Q  506 tttattttaactttattttaaagtagcttttagatcg 542  Q
    |||||||||||||| ||||||||||||||||||||||    
T  5526226 tttattttaactttgttttaaagtagcttttagatcg 5526262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 504 - 539
Target Start/End: Complemental strand, 4400019 - 4399984
Alignment:
Q  504 gctttattttaactttattttaaagtagcttttaga 539  Q
    |||||||||||||||| |||||||||||||||||||    
T  4400019 gctttattttaactttgttttaaagtagcttttaga 4399984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 376 - 447
Target Start/End: Original strand, 4895089 - 4895160
Alignment:
Q  376 tgttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcccatgtgaa 447  Q
    ||||||||| |||||||||| | | ||   |||||||||||||||| ||  |||||||||||||||||||||    
T  4895089 tgttcttcacttaatctaataattgaatccaactttcccatggtggaaaatgattaacctttcccatgtgaa 4895160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 496 - 539
Target Start/End: Original strand, 10999225 - 10999268
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| || |||||||||||||| |||||||||||||||||||    
T  10999225 cttaaagagttttattttaactttgttttaaagtagcttttaga 10999268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 496 - 539
Target Start/End: Complemental strand, 16933447 - 16933404
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| ||||||| |||||||||||    
T  16933447 cttaaagagctttattttaactttgttttaaaatagcttttaga 16933404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 496 - 539
Target Start/End: Complemental strand, 16938830 - 16938787
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| ||||||| |||||||||||    
T  16938830 cttaaagagctttattttaactttgttttaaaatagcttttaga 16938787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 496 - 539
Target Start/End: Original strand, 17278268 - 17278311
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| |||||||||| |||||| |||||||||||||||||||    
T  17278268 cttaaagagctttatttcaactttgttttaaagtagcttttaga 17278311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 376 - 447
Target Start/End: Original strand, 19816899 - 19816970
Alignment:
Q  376 tgttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcccatgtgaa 447  Q
    ||||||||| |||||||||| | | ||   |||||||||||||||| || ||||||||||||||||| ||||    
T  19816899 tgttcttcacttaatctaatcatttaatccaactttcccatggtggaaaaggattaacctttcccatatgaa 19816970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 496 - 535
Target Start/End: Complemental strand, 27031188 - 27031149
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttt 535  Q
    |||||| ||||||||||||||||| |||||||||||||||    
T  27031188 cttaaagagctttattttaactttgttttaaagtagcttt 27031149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 376 - 447
Target Start/End: Complemental strand, 27855644 - 27855574
Alignment:
Q  376 tgttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcccatgtgaa 447  Q
    ||||||||| |||||||||| | | || | ||||||| |||||||||||  |||||||||||||||||||||    
T  27855644 tgttcttcacttaatctaatcattgaa-tcaactttctcatggtgggaaatgattaacctttcccatgtgaa 27855574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 496 - 539
Target Start/End: Complemental strand, 29448677 - 29448634
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| | ||||||||||||||| |||||||||||||||||||    
T  29448677 cttaaagaactttattttaactttgttttaaagtagcttttaga 29448634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 312 - 347
Target Start/End: Original strand, 31235063 - 31235098
Alignment:
Q  312 agagagaatggtggtggaaggtgtaaaagaaataat 347  Q
    |||||||| |||||||||||||||||||||||||||    
T  31235063 agagagaagggtggtggaaggtgtaaaagaaataat 31235098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 496 - 539
Target Start/End: Complemental strand, 32960757 - 32960714
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| || |||||||||||||| |||||||||||||||||||    
T  32960757 cttaaagagttttattttaactttgttttaaagtagcttttaga 32960714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 496 - 539
Target Start/End: Complemental strand, 37669230 - 37669187
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| ||||||||||| |||||||    
T  37669230 cttaaagagctttattttaactttgttttaaagtagtttttaga 37669187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 496 - 539
Target Start/End: Original strand, 38045769 - 38045812
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| ||||||||||| |||||||    
T  38045769 cttaaagagctttattttaactttgttttaaagtagtttttaga 38045812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 496 - 539
Target Start/End: Complemental strand, 41343281 - 41343238
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| ||||||||||| |||||||    
T  41343281 cttaaagagctttattttaactttgttttaaagtagtttttaga 41343238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 496 - 542
Target Start/End: Original strand, 20482395 - 20482441
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttagatcg 542  Q
    |||||||  ||||||||||||||| |||||||||||||||| |||||    
T  20482395 cttaaatgcctttattttaactttgttttaaagtagctttttgatcg 20482441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 496 - 542
Target Start/End: Complemental strand, 23639376 - 23639330
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttagatcg 542  Q
    |||||| | ||||||||||||||| ||||||||||||| ||||||||    
T  23639376 cttaaagaactttattttaactttgttttaaagtagctcttagatcg 23639330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 409 - 455
Target Start/End: Original strand, 24324021 - 24324067
Alignment:
Q  409 tttcccatggtgggaatggattaacctttcccatgtgaacaaacacc 455  Q
    |||||||| |||||||  ||||||||||||||||||||||| |||||    
T  24324021 tttcccatagtgggaaatgattaacctttcccatgtgaacacacacc 24324067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 409 - 447
Target Start/End: Complemental strand, 42455967 - 42455929
Alignment:
Q  409 tttcccatggtgggaatggattaacctttcccatgtgaa 447  Q
    |||||| ||||||||| ||||||||||||||||||||||    
T  42455967 tttcccgtggtgggaaaggattaacctttcccatgtgaa 42455929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 406 - 447
Target Start/End: Original strand, 85086 - 85127
Alignment:
Q  406 aactttcccatggtgggaatggattaacctttcccatgtgaa 447  Q
    |||||| |||||||||||| ||||| ||||||||||||||||    
T  85086 aacttttccatggtgggaaaggattcacctttcccatgtgaa 85127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 506 - 539
Target Start/End: Original strand, 5483528 - 5483561
Alignment:
Q  506 tttattttaactttattttaaagtagcttttaga 539  Q
    |||||||||||||| |||||||||||||||||||    
T  5483528 tttattttaactttgttttaaagtagcttttaga 5483561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 406 - 447
Target Start/End: Original strand, 33806604 - 33806645
Alignment:
Q  406 aactttcccatggtgggaatggattaacctttcccatgtgaa 447  Q
    |||||||| |||||||||| ||||| ||||||||||||||||    
T  33806604 aactttccaatggtgggaaaggattgacctttcccatgtgaa 33806645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 506 - 539
Target Start/End: Original strand, 41427084 - 41427117
Alignment:
Q  506 tttattttaactttattttaaagtagcttttaga 539  Q
    |||||||||||||| |||||||||||||||||||    
T  41427084 tttattttaactttgttttaaagtagcttttaga 41427117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 376 - 441
Target Start/End: Complemental strand, 47814050 - 47813985
Alignment:
Q  376 tgttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggattaacctttccca 441  Q
    ||||||||| |||||||||| | | ||   |||||| |||||||||||| ||||||||||||||||    
T  47814050 tgttcttcacttaatctaatcattgaatccaacttttccatggtgggaaaggattaacctttccca 47813985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 59; Significance: 2e-24; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 321 - 455
Target Start/End: Original strand, 48620275 - 48620409
Alignment:
Q  321 ggtggtggaaggtgtaaaagaaataatctagtgttgaaagtgtaccatatgattgtgttcttcaattaatctaatgactaaagttaactttcccatggtg 420  Q
    |||||||||| | ||||||||||||||||| || ||  ||||||  ||| |||||||||||||||||||||| | ||| ||| ||||||||   ||||||    
T  48620275 ggtggtggaaagggtaaaagaaataatctaatgctggcagtgtatgataagattgtgttcttcaattaatctgacgaccaaaattaacttttttatggtg 48620374  T
Q  421 ggaatggattaacctttcccatgtgaacaaacacc 455  Q
    |||| ||||| |||||||||||||||||| |||||    
T  48620375 ggaaaggattcacctttcccatgtgaacacacacc 48620409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 376 - 457
Target Start/End: Original strand, 52859795 - 52859876
Alignment:
Q  376 tgttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcccatgtgaacaaacaccct 457  Q
    ||||||||| |||||||||| | | || | |||||||||||||| |||| |||||||||||||||||||||||| |||||||    
T  52859795 tgttcttcacttaatctaatcattgaattcaactttcccatggttggaaaggattaacctttcccatgtgaacacacaccct 52859876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 405 - 455
Target Start/End: Complemental strand, 42839751 - 42839701
Alignment:
Q  405 taactttcccatggtgggaatggattaacctttcccatgtgaacaaacacc 455  Q
    |||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  42839751 taactttcccatggtgggaaaggattaacctttcccatgtgaacacacacc 42839701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 376 - 455
Target Start/End: Original strand, 1403695 - 1403773
Alignment:
Q  376 tgttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcccatgtgaacaaacacc 455  Q
    ||||||||| |||||||||| | | || | ||||||||||||||||||| |||||||||||||| ||||||||| |||||    
T  1403695 tgttcttcacttaatctaatcattgaa-tcaactttcccatggtgggaaaggattaacctttcctatgtgaacacacacc 1403773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 376 - 455
Target Start/End: Original strand, 8560750 - 8560828
Alignment:
Q  376 tgttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcccatgtgaacaaacacc 455  Q
    ||||||||| |||||||||| | | || | |||||| |||||||||||| |||||||||||||||||||||||| |||||    
T  8560750 tgttcttcacttaatctaatcattgaa-tcaacttttccatggtgggaaaggattaacctttcccatgtgaacacacacc 8560828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 376 - 455
Target Start/End: Complemental strand, 27797196 - 27797117
Alignment:
Q  376 tgttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcccatgtgaacaaacacc 455  Q
    ||||||||| |||||||||| | | || | ||| ||||||||||||||| |||||||||||| ||||||||||| |||||    
T  27797196 tgttcttcacttaatctaatcattgaattcaaccttcccatggtgggaaaggattaaccttttccatgtgaacacacacc 27797117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 496 - 539
Target Start/End: Complemental strand, 39327005 - 39326962
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| |||||||||||||||||||||||||||||||||||||    
T  39327005 cttaaagagctttattttaactttattttaaagtagcttttaga 39326962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 376 - 455
Target Start/End: Original strand, 43368842 - 43368921
Alignment:
Q  376 tgttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcccatgtgaacaaacacc 455  Q
    ||||||||| |||||||||| | | ||   ||||||||||||||||||| | |||||||||||||||||||||| |||||    
T  43368842 tgttcttcacttaatctaatcattgaatacaactttcccatggtgggaaagaattaacctttcccatgtgaacacacacc 43368921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 496 - 542
Target Start/End: Complemental strand, 11754189 - 11754143
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttagatcg 542  Q
    |||||| ||||||||||||||||| ||||||||||||||||||||||    
T  11754189 cttaaagagctttattttaactttgttttaaagtagcttttagatcg 11754143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 496 - 542
Target Start/End: Complemental strand, 31215825 - 31215779
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttagatcg 542  Q
    |||||| ||||||||||||||||| ||||||||||||||||||||||    
T  31215825 cttaaagagctttattttaactttgttttaaagtagcttttagatcg 31215779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 496 - 542
Target Start/End: Complemental strand, 31221580 - 31221534
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttagatcg 542  Q
    |||||| ||||||||||||||||| ||||||||||||||||||||||    
T  31221580 cttaaagagctttattttaactttgttttaaagtagcttttagatcg 31221534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 496 - 537
Target Start/End: Complemental strand, 14487285 - 14487244
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagctttta 537  Q
    |||||| |||||||||||||||||||||||||||||||||||    
T  14487285 cttaaagagctttattttaactttattttaaagtagctttta 14487244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 376 - 441
Target Start/End: Original strand, 42839555 - 42839620
Alignment:
Q  376 tgttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggattaacctttccca 441  Q
    ||||||||| |||||||||| | | || | ||||||||||||||||||| ||||||||||||||||    
T  42839555 tgttcttcacttaatctaatcattgaattcaactttcccatggtgggaaaggattaacctttccca 42839620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 376 - 447
Target Start/End: Complemental strand, 1403119 - 1403048
Alignment:
Q  376 tgttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcccatgtgaa 447  Q
    ||||||||| |||||||||| | | ||   ||||||||||||||||||| |||||||||||| |||||||||    
T  1403119 tgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaaccttttccatgtgaa 1403048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 496 - 539
Target Start/End: Original strand, 7833659 - 7833702
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| |||||||||||||||||||    
T  7833659 cttaaagagctttattttaactttgttttaaagtagcttttaga 7833702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 496 - 539
Target Start/End: Original strand, 9574975 - 9575018
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| |||||||||||||||||||    
T  9574975 cttaaagagctttattttaactttgttttaaagtagcttttaga 9575018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 496 - 539
Target Start/End: Complemental strand, 17366315 - 17366272
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| |||||||||||||||||||    
T  17366315 cttaaagagctttattttaactttgttttaaagtagcttttaga 17366272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 496 - 539
Target Start/End: Complemental strand, 25659770 - 25659727
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| |||||||||||||||||||    
T  25659770 cttaaagagctttattttaactttgttttaaagtagcttttaga 25659727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 496 - 539
Target Start/End: Original strand, 33642724 - 33642767
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| |||||||||||||||||||    
T  33642724 cttaaagagctttattttaactttgttttaaagtagcttttaga 33642767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 496 - 539
Target Start/End: Complemental strand, 33895177 - 33895134
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| |||||||||||||||||||    
T  33895177 cttaaagagctttattttaactttgttttaaagtagcttttaga 33895134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 496 - 539
Target Start/End: Complemental strand, 36165480 - 36165437
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||||||||||| |||||||||||    
T  36165480 cttaaaaagctttattttaactttattttaaaatagcttttaga 36165437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 496 - 539
Target Start/End: Original strand, 38802419 - 38802462
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| |||||||||||||||||||    
T  38802419 cttaaagagctttattttaactttgttttaaagtagcttttaga 38802462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 496 - 539
Target Start/End: Complemental strand, 40432159 - 40432116
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| |||||||||||||||||||    
T  40432159 cttaaagagctttattttaactttgttttaaagtagcttttaga 40432116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 496 - 539
Target Start/End: Complemental strand, 41901660 - 41901617
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| |||||||||||||||||||    
T  41901660 cttaaagagctttattttaactttgttttaaagtagcttttaga 41901617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 376 - 447
Target Start/End: Complemental strand, 42839016 - 42838945
Alignment:
Q  376 tgttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcccatgtgaa 447  Q
    ||||||||| |||||||||| | | |   |||||||||||||||||||| |||||||||||| |||||||||    
T  42839016 tgttcttcacttaatctaatcattgactctaactttcccatggtgggaaaggattaacctttaccatgtgaa 42838945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 496 - 539
Target Start/End: Complemental strand, 43120739 - 43120696
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| |||||||||||||||||||    
T  43120739 cttaaagagctttattttaactttgttttaaagtagcttttaga 43120696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 496 - 539
Target Start/End: Complemental strand, 44819865 - 44819822
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||||| ||||||||||||||| |||||||||||||||||||    
T  44819865 cttaaatacctttattttaactttgttttaaagtagcttttaga 44819822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 409 - 455
Target Start/End: Original strand, 7219687 - 7219733
Alignment:
Q  409 tttcccatggtgggaatggattaacctttcccatgtgaacaaacacc 455  Q
    ||||||||| |||||| |||||||||||||||||||||||| |||||    
T  7219687 tttcccatgatgggaaaggattaacctttcccatgtgaacacacacc 7219733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 496 - 542
Target Start/End: Original strand, 45104294 - 45104340
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttagatcg 542  Q
    |||||| ||||||||||||||||| ||| ||||||||||||||||||    
T  45104294 cttaaagagctttattttaactttgtttaaaagtagcttttagatcg 45104340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 406 - 447
Target Start/End: Original strand, 49534433 - 49534474
Alignment:
Q  406 aactttcccatggtgggaatggattaacctttcccatgtgaa 447  Q
    |||||| |||||||||||| ||||||||||||||||||||||    
T  49534433 aacttttccatggtgggaaaggattaacctttcccatgtgaa 49534474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 506 - 542
Target Start/End: Complemental strand, 11606414 - 11606378
Alignment:
Q  506 tttattttaactttattttaaagtagcttttagatcg 542  Q
    |||||||||||||||||||||||||||||| ||||||    
T  11606414 tttattttaactttattttaaagtagctttaagatcg 11606378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 503 - 539
Target Start/End: Original strand, 34078401 - 34078437
Alignment:
Q  503 agctttattttaactttattttaaagtagcttttaga 539  Q
    |||||||||||||||| ||||||||||||||||||||    
T  34078401 agctttattttaacttcattttaaagtagcttttaga 34078437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 503 - 539
Target Start/End: Complemental strand, 47037084 - 47037048
Alignment:
Q  503 agctttattttaactttattttaaagtagcttttaga 539  Q
    ||||||||||||||||| |||||||||||||||||||    
T  47037084 agctttattttaactttgttttaaagtagcttttaga 47037048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 496 - 539
Target Start/End: Original strand, 17585629 - 17585672
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| || |||||||||||||| |||||||||||||||||||    
T  17585629 cttaaagagttttattttaactttgttttaaagtagcttttaga 17585672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 376 - 447
Target Start/End: Original strand, 27797743 - 27797814
Alignment:
Q  376 tgttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcccatgtgaa 447  Q
    ||||||||| |||||||||| | | |   |||||||||||| |||| || ||||||||||||||||||||||    
T  27797743 tgttcttcacttaatctaatcattgactctaactttcccatagtggaaaaggattaacctttcccatgtgaa 27797814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 376 - 447
Target Start/End: Original strand, 27817011 - 27817082
Alignment:
Q  376 tgttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcccatgtgaa 447  Q
    ||||||||| |||||||||| | | ||   |||||| |||||||||||| ||||||||||| ||||||||||    
T  27817011 tgttcttcacttaatctaatcattgaatccaacttttccatggtgggaaaggattaaccttacccatgtgaa 27817082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 496 - 539
Target Start/End: Complemental strand, 33373781 - 33373738
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| ||||||||||| |||||||    
T  33373781 cttaaagagctttattttaactttgttttaaagtagtttttaga 33373738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 496 - 539
Target Start/End: Complemental strand, 33818056 - 33818013
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| ||||||| |||||||||||    
T  33818056 cttaaagagctttattttaactttgttttaaaatagcttttaga 33818013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 496 - 539
Target Start/End: Complemental strand, 33831891 - 33831848
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| ||||||||||| |||||||    
T  33831891 cttaaagagctttattttaactttgttttaaagtagattttaga 33831848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 496 - 539
Target Start/End: Complemental strand, 33877524 - 33877481
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| ||||||| |||||||||||    
T  33877524 cttaaagagctttattttaactttgttttaaaatagcttttaga 33877481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 496 - 539
Target Start/End: Complemental strand, 33894054 - 33894011
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| ||||||||||| |||||||    
T  33894054 cttaaagagctttattttaactttgttttaaagtagattttaga 33894011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 496 - 539
Target Start/End: Original strand, 33933029 - 33933072
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| | ||||||||||||||| |||||||||||||||||||    
T  33933029 cttaaagaactttattttaactttgttttaaagtagcttttaga 33933072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 376 - 455
Target Start/End: Original strand, 42840320 - 42840399
Alignment:
Q  376 tgttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcccatgtgaacaaacacc 455  Q
    ||||||||| |||||||||| | | || | ||||||||||| |||| ||  |||||||||||||||||| |||| |||||    
T  42840320 tgttcttcacttaatctaatcattgaattcaactttcccatagtggaaaatgattaacctttcccatgtaaacacacacc 42840399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 496 - 539
Target Start/End: Complemental strand, 46588053 - 46588010
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| ||||| |||||||||||||    
T  46588053 cttaaagagctttattttaactttgttttagagtagcttttaga 46588010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 505 - 539
Target Start/End: Original strand, 16097467 - 16097501
Alignment:
Q  505 ctttattttaactttattttaaagtagcttttaga 539  Q
    ||||||||||||||| |||||||||||||||||||    
T  16097467 ctttattttaactttgttttaaagtagcttttaga 16097501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 406 - 440
Target Start/End: Complemental strand, 29148989 - 29148955
Alignment:
Q  406 aactttcccatggtgggaatggattaacctttccc 440  Q
    ||||||||||||||||||| |||||||||||||||    
T  29148989 aactttcccatggtgggaaaggattaacctttccc 29148955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 505 - 539
Target Start/End: Complemental strand, 36952665 - 36952631
Alignment:
Q  505 ctttattttaactttattttaaagtagcttttaga 539  Q
    ||||||||||||||| |||||||||||||||||||    
T  36952665 ctttattttaactttgttttaaagtagcttttaga 36952631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 497 - 539
Target Start/End: Complemental strand, 39729165 - 39729123
Alignment:
Q  497 ttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    ||||| ||||||||||||| ||| |||||||||||||||||||    
T  39729165 ttaaagagctttattttaattttgttttaaagtagcttttaga 39729123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 496 - 542
Target Start/End: Complemental strand, 43119075 - 43119029
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttagatcg 542  Q
    |||||| || |||||||||| ||| ||||||||||||||||||||||    
T  43119075 cttaaagagttttattttaattttgttttaaagtagcttttagatcg 43119029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 376 - 442
Target Start/End: Complemental strand, 43368269 - 43368203
Alignment:
Q  376 tgttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcccat 442  Q
    ||||||||| ||||| |||| | | ||  |||| ||||||||||||||| |||||||||||||||||    
T  43368269 tgttcttcacttaatttaatcattgaatctaacattcccatggtgggaaaggattaacctttcccat 43368203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 504 - 542
Target Start/End: Complemental strand, 46040440 - 46040402
Alignment:
Q  504 gctttattttaactttattttaaagtagcttttagatcg 542  Q
    |||||||||||||||| ||||||| ||||||||||||||    
T  46040440 gctttattttaactttgttttaaaatagcttttagatcg 46040402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 410 - 447
Target Start/End: Complemental strand, 8560201 - 8560164
Alignment:
Q  410 ttcccatggtgggaatggattaacctttcccatgtgaa 447  Q
    |||||||||||| || ||||||||||||||||||||||    
T  8560201 ttcccatggtggaaaaggattaacctttcccatgtgaa 8560164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 505 - 542
Target Start/End: Complemental strand, 12247719 - 12247682
Alignment:
Q  505 ctttattttaactttattttaaagtagcttttagatcg 542  Q
    ||||||||||||||| |||||||||| |||||||||||    
T  12247719 ctttattttaactttgttttaaagtaacttttagatcg 12247682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 504 - 537
Target Start/End: Original strand, 17249157 - 17249190
Alignment:
Q  504 gctttattttaactttattttaaagtagctttta 537  Q
    |||||||||||||||| |||||||||||||||||    
T  17249157 gctttattttaactttgttttaaagtagctttta 17249190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 504 - 537
Target Start/End: Original strand, 43123160 - 43123193
Alignment:
Q  504 gctttattttaactttattttaaagtagctttta 537  Q
    |||||||||||||||| |||||||||||||||||    
T  43123160 gctttattttaactttgttttaaagtagctttta 43123193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 376 - 449
Target Start/End: Complemental strand, 49533822 - 49533749
Alignment:
Q  376 tgttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcccatgtgaaca 449  Q
    ||||||||| |||||||||| | | ||   ||||||||| ||||||||| ||||||||||| || |||||||||    
T  49533822 tgttcttcacttaatctaatcattgaatccaactttcccgtggtgggaaaggattaaccttccctatgtgaaca 49533749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 52; Significance: 3e-20; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 352 - 447
Target Start/End: Original strand, 44829261 - 44829356
Alignment:
Q  352 tgttgaaagtgtaccatatgattgtgttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcccatgtgaa 447  Q
    |||||||||||||  ||| ||||||| ||||||||| |||||||||||||||| |||||||| ||||||| || ||||| ||| ||||||||||||    
T  44829261 tgttgaaagtgtatgataagattgtgctcttcaattgatctaatgactaaagtgaactttcctatggtggaaaaggattcaccattcccatgtgaa 44829356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 376 - 456
Target Start/End: Original strand, 28224395 - 28224475
Alignment:
Q  376 tgttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcccatgtgaacaaacaccc 456  Q
    ||||||||| |||||||||| | | ||   ||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  28224395 tgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtgaacacacaccc 28224475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 376 - 455
Target Start/End: Complemental strand, 6849367 - 6849288
Alignment:
Q  376 tgttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcccatgtgaacaaacacc 455  Q
    ||||||||| |||||||||| | | ||   ||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  6849367 tgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtgaacacacacc 6849288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 376 - 447
Target Start/End: Original strand, 4386967 - 4387038
Alignment:
Q  376 tgttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcccatgtgaa 447  Q
    ||||||||| |||||||||| | | ||   ||||||||||||||||||| ||||||||||||||||||||||    
T  4386967 tgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtgaa 4387038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 376 - 447
Target Start/End: Complemental strand, 9224345 - 9224274
Alignment:
Q  376 tgttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcccatgtgaa 447  Q
    ||||||||| |||||||||| | | ||   ||||||||||||||||||| ||||||||||||||||||||||    
T  9224345 tgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtgaa 9224274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 406 - 449
Target Start/End: Complemental strand, 10883336 - 10883293
Alignment:
Q  406 aactttcccatggtgggaatggattaacctttcccatgtgaaca 449  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  10883336 aactttcccatggtgggaaaggattaacctttcccatgtgaaca 10883293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 376 - 455
Target Start/End: Complemental strand, 16887662 - 16887583
Alignment:
Q  376 tgttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcccatgtgaacaaacacc 455  Q
    ||||||||| |||||||||| | | ||   |||| |||||||||||||| |||||||||||||||||||||||| |||||    
T  16887662 tgttcttcacttaatctaatcattgaatccaactatcccatggtgggaaaggattaacctttcccatgtgaacacacacc 16887583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 496 - 542
Target Start/End: Original strand, 4631326 - 4631372
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttagatcg 542  Q
    |||||| ||||||||||||||||| ||||||||||||||||||||||    
T  4631326 cttaaagagctttattttaactttgttttaaagtagcttttagatcg 4631372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 406 - 455
Target Start/End: Complemental strand, 3595295 - 3595246
Alignment:
Q  406 aactttcccatggtgggaatggattaacctttcccatgtgaacaaacacc 455  Q
    ||||||||||||||||||| | |||||||||||||||||||||| |||||    
T  3595295 aactttcccatggtgggaaagaattaacctttcccatgtgaacacacacc 3595246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 406 - 455
Target Start/End: Original strand, 7717321 - 7717370
Alignment:
Q  406 aactttcccatggtgggaatggattaacctttcccatgtgaacaaacacc 455  Q
    ||||||||||||||| ||| |||||||||||||||||||||||| |||||    
T  7717321 aactttcccatggtgagaaaggattaacctttcccatgtgaacacacacc 7717370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 406 - 447
Target Start/End: Complemental strand, 16571167 - 16571126
Alignment:
Q  406 aactttcccatggtgggaatggattaacctttcccatgtgaa 447  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  16571167 aactttcccatggtgggaaaggattaacctttcccatgtgaa 16571126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 496 - 539
Target Start/End: Original strand, 971068 - 971111
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| |||||||||||||||||||    
T  971068 cttaaagagctttattttaactttgttttaaagtagcttttaga 971111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 496 - 539
Target Start/End: Original strand, 1835798 - 1835841
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| |||||||||||||||||||    
T  1835798 cttaaagagctttattttaactttgttttaaagtagcttttaga 1835841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 496 - 539
Target Start/End: Original strand, 3079830 - 3079873
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| |||||||||||||||||||    
T  3079830 cttaaagagctttattttaactttgttttaaagtagcttttaga 3079873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 496 - 539
Target Start/End: Complemental strand, 3243255 - 3243212
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| |||||||||||||||||||    
T  3243255 cttaaagagctttattttaactttgttttaaagtagcttttaga 3243212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 496 - 539
Target Start/End: Original strand, 7274785 - 7274828
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| |||||||||||||||||||    
T  7274785 cttaaagagctttattttaactttgttttaaagtagcttttaga 7274828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 376 - 447
Target Start/End: Complemental strand, 7716750 - 7716679
Alignment:
Q  376 tgttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcccatgtgaa 447  Q
    ||||||||| |||||||||| | | ||   ||||||||||||||||||| |||||||| |||||||||||||    
T  7716750 tgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacatttcccatgtgaa 7716679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 496 - 539
Target Start/End: Original strand, 8683773 - 8683816
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| |||||||||||||||||||    
T  8683773 cttaaagagctttattttaactttgttttaaagtagcttttaga 8683816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 496 - 539
Target Start/End: Original strand, 8878234 - 8878277
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| |||||||||||||||||||    
T  8878234 cttaaagagctttattttaactttgttttaaagtagcttttaga 8878277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 496 - 539
Target Start/End: Complemental strand, 17032774 - 17032731
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| |||||||||||||||||||    
T  17032774 cttaaagagctttattttaactttgttttaaagtagcttttaga 17032731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 496 - 539
Target Start/End: Complemental strand, 17051110 - 17051067
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| |||||||||||||||||||    
T  17051110 cttaaagagctttattttaactttgttttaaagtagcttttaga 17051067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 376 - 447
Target Start/End: Original strand, 20244178 - 20244249
Alignment:
Q  376 tgttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcccatgtgaa 447  Q
    ||||||||| |||||||||| | | ||   |||||| |||||||||||| ||||||||||||||||||||||    
T  20244178 tgttcttcacttaatctaatcattgaatccaacttttccatggtgggaaaggattaacctttcccatgtgaa 20244249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 376 - 447
Target Start/End: Complemental strand, 28223867 - 28223796
Alignment:
Q  376 tgttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcccatgtgaa 447  Q
    ||||||||| |||||||||| | | ||   |||||||| |||||||||| ||||||||||||||||||||||    
T  28223867 tgttcttcacttaatctaatcattgaatccaactttcctatggtgggaaaggattaacctttcccatgtgaa 28223796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 496 - 539
Target Start/End: Original strand, 34912764 - 34912807
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| |||||||||||||||||||    
T  34912764 cttaaagagctttattttaactttgttttaaagtagcttttaga 34912807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 496 - 539
Target Start/End: Original strand, 40202328 - 40202371
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| |||||||||||||||||||    
T  40202328 cttaaagagctttattttaactttgttttaaagtagcttttaga 40202371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 496 - 542
Target Start/End: Original strand, 1118093 - 1118139
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttagatcg 542  Q
    |||||| || |||||||||||||| ||||||||||||||||||||||    
T  1118093 cttaaagagttttattttaactttgttttaaagtagcttttagatcg 1118139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 497 - 539
Target Start/End: Complemental strand, 3324223 - 3324181
Alignment:
Q  497 ttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    ||||| ||||||||||||||||| |||||||||||||||||||    
T  3324223 ttaaagagctttattttaactttgttttaaagtagcttttaga 3324181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 409 - 455
Target Start/End: Original strand, 16571766 - 16571812
Alignment:
Q  409 tttcccatggtgggaatggattaacctttcccatgtgaacaaacacc 455  Q
    ||||||||| |||||| |||||||||||||||||||||||| |||||    
T  16571766 tttcccatgatgggaaaggattaacctttcccatgtgaacacacacc 16571812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 497 - 539
Target Start/End: Original strand, 35423894 - 35423936
Alignment:
Q  497 ttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    ||||| ||||||||||||||||| |||||||||||||||||||    
T  35423894 ttaaagagctttattttaactttgttttaaagtagcttttaga 35423936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 406 - 455
Target Start/End: Complemental strand, 4386404 - 4386355
Alignment:
Q  406 aactttcccatggtgggaatggattaacctttcccatgtgaacaaacacc 455  Q
    |||||||| |||||||||| | |||||||||||||||||||||| |||||    
T  4386404 aactttcctatggtgggaaagtattaacctttcccatgtgaacacacacc 4386355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 406 - 447
Target Start/End: Original strand, 8113337 - 8113378
Alignment:
Q  406 aactttcccatggtgggaatggattaacctttcccatgtgaa 447  Q
    |||||||||||||||| || ||||||||||||||||||||||    
T  8113337 aactttcccatggtggaaaaggattaacctttcccatgtgaa 8113378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 406 - 447
Target Start/End: Complemental strand, 12206837 - 12206796
Alignment:
Q  406 aactttcccatggtgggaatggattaacctttcccatgtgaa 447  Q
    ||||||| ||||||||||| ||||||||||||||||||||||    
T  12206837 aactttctcatggtgggaaaggattaacctttcccatgtgaa 12206796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 496 - 537
Target Start/End: Original strand, 31972396 - 31972437
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagctttta 537  Q
    |||||| ||||||||||||||||| |||||||||||||||||    
T  31972396 cttaaagagctttattttaactttgttttaaagtagctttta 31972437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 505 - 538
Target Start/End: Original strand, 38879258 - 38879291
Alignment:
Q  505 ctttattttaactttattttaaagtagcttttag 538  Q
    ||||||||||||||||||||||||||||||||||    
T  38879258 ctttattttaactttattttaaagtagcttttag 38879291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 496 - 537
Target Start/End: Complemental strand, 38959605 - 38959564
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagctttta 537  Q
    |||||| ||||||||||||||||| |||||||||||||||||    
T  38959605 cttaaagagctttattttaactttgttttaaagtagctttta 38959564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 376 - 449
Target Start/End: Original strand, 39477332 - 39477405
Alignment:
Q  376 tgttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcccatgtgaaca 449  Q
    ||||||||| |||||||||| | | ||   |||||||||||||||||||  |||||||||||||||| ||||||    
T  39477332 tgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaatgattaacctttcccatatgaaca 39477405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 496 - 536
Target Start/End: Original strand, 5166381 - 5166421
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagctttt 536  Q
    |||||| ||||||||||||||||| ||||||||||||||||    
T  5166381 cttaaagagctttattttaactttgttttaaagtagctttt 5166421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 376 - 444
Target Start/End: Original strand, 6849549 - 6849617
Alignment:
Q  376 tgttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcccatgt 444  Q
    ||||||||| |||||||||| | | ||   ||||||||||||||||||| |||||||||||| ||||||    
T  6849549 tgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaaccttttccatgt 6849617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 497 - 537
Target Start/End: Complemental strand, 36078521 - 36078481
Alignment:
Q  497 ttaaatagctttattttaactttattttaaagtagctttta 537  Q
    ||||| ||||||||||||||||| |||||||||||||||||    
T  36078521 ttaaagagctttattttaactttgttttaaagtagctttta 36078481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 496 - 539
Target Start/End: Complemental strand, 668252 - 668209
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| | ||||||||||||||| |||||||||||||||||||    
T  668252 cttaaagaactttattttaactttgttttaaagtagcttttaga 668209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 496 - 539
Target Start/End: Complemental strand, 20313208 - 20313165
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| |||||||||| ||||||||    
T  20313208 cttaaagagctttattttaactttgttttaaagtaacttttaga 20313165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 496 - 539
Target Start/End: Complemental strand, 36085907 - 36085864
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| | ||||||||||||||| |||||||||||||||||||    
T  36085907 cttaaagatctttattttaactttgttttaaagtagcttttaga 36085864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 409 - 455
Target Start/End: Complemental strand, 7583178 - 7583132
Alignment:
Q  409 tttcccatggtgggaatggattaacctttcccatgtgaacaaacacc 455  Q
    |||| ||||||||||| |||||||||||||| ||||||||| |||||    
T  7583178 tttctcatggtgggaaaggattaacctttccgatgtgaacacacacc 7583132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 496 - 542
Target Start/End: Complemental strand, 24926046 - 24926000
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttagatcg 542  Q
    |||||| ||||||||||||||||| ||| ||||||||||||| ||||    
T  24926046 cttaaagagctttattttaactttgtttaaaagtagcttttaaatcg 24926000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 409 - 455
Target Start/End: Original strand, 40166883 - 40166929
Alignment:
Q  409 tttcccatggtgggaatggattaacctttcccatgtgaacaaacacc 455  Q
    |||||||||||||||| |||||||||||||| |||||| || |||||    
T  40166883 tttcccatggtgggaaaggattaacctttcctatgtgagcacacacc 40166929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 409 - 447
Target Start/End: Original strand, 43743842 - 43743880
Alignment:
Q  409 tttcccatggtgggaatggattaacctttcccatgtgaa 447  Q
    |||||||||||||||| ||||| ||||||||||||||||    
T  43743842 tttcccatggtgggaaaggattcacctttcccatgtgaa 43743880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 496 - 530
Target Start/End: Original strand, 45474836 - 45474870
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagta 530  Q
    |||||| ||||||||||||||||||||||||||||    
T  45474836 cttaaagagctttattttaactttattttaaagta 45474870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 406 - 447
Target Start/End: Original strand, 7583830 - 7583871
Alignment:
Q  406 aactttcccatggtgggaatggattaacctttcccatgtgaa 447  Q
    ||||||||||| |||||||  |||||||||||||||||||||    
T  7583830 aactttcccatagtgggaaaagattaacctttcccatgtgaa 7583871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 406 - 455
Target Start/End: Complemental strand, 8112729 - 8112680
Alignment:
Q  406 aactttcccatggtgggaatggattaacctttcccatgtgaacaaacacc 455  Q
    ||||||||||||||| ||| |||||||| |||| |||||||||| |||||    
T  8112729 aactttcccatggtgagaaaggattaacatttctcatgtgaacacacacc 8112680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 376 - 449
Target Start/End: Complemental strand, 11256195 - 11256122
Alignment:
Q  376 tgttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcccatgtgaaca 449  Q
    ||||||||| |||||||||| | | ||   |||||| |||||||| |||  |||||||||||||||||||||||    
T  11256195 tgttcttcacttaatctaatcattgaatccaactttaccatggtgagaaatgattaacctttcccatgtgaaca 11256122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 505 - 542
Target Start/End: Complemental strand, 35287260 - 35287223
Alignment:
Q  505 ctttattttaactttattttaaagtagcttttagatcg 542  Q
    ||||||||||||||| |||||||||| |||||||||||    
T  35287260 ctttattttaactttgttttaaagtaacttttagatcg 35287223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0481 (Bit Score: 39; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 496 - 542
Target Start/End: Complemental strand, 4474 - 4428
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttagatcg 542  Q
    |||||| ||||||||||||||||| ||||||||||||||||||||||    
T  4474 cttaaagagctttattttaactttgttttaaagtagcttttagatcg 4428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0481; HSP #2
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 496 - 539
Target Start/End: Original strand, 7564 - 7607
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| |||||||||||||||||||    
T  7564 cttaaagagctttattttaactttgttttaaagtagcttttaga 7607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0229 (Bit Score: 36; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 376 - 447
Target Start/End: Original strand, 15240 - 15311
Alignment:
Q  376 tgttcttcaattaatctaatgactaaagttaactttcccatggtgggaatggattaacctttcccatgtgaa 447  Q
    ||||||||| |||||||||| | | ||   ||||||||||||||||||| |||||||||||| |||||||||    
T  15240 tgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaaccttttccatgtgaa 15311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 36; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 496 - 539
Target Start/End: Complemental strand, 7250 - 7207
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| |||||||||||||||||||    
T  7250 cttaaagagctttattttaactttgttttaaagtagcttttaga 7207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 36; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 496 - 539
Target Start/End: Original strand, 1587 - 1630
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| |||||||||||||||||||    
T  1587 cttaaagagctttattttaactttgttttaaagtagcttttaga 1630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 36; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 496 - 539
Target Start/End: Original strand, 132772 - 132815
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| |||||||||||||||||||    
T  132772 cttaaagagctttattttaactttgttttaaagtagcttttaga 132815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0368 (Bit Score: 35; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0368
Description:

Target: scaffold0368; HSP #1
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 405 - 447
Target Start/End: Original strand, 11820 - 11862
Alignment:
Q  405 taactttcccatggtgggaatggattaacctttcccatgtgaa 447  Q
    |||||||||||||||||||| |||||||||||| |||||||||    
T  11820 taactttcccatggtgggaaaggattaacctttaccatgtgaa 11862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 35; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 497 - 539
Target Start/End: Complemental strand, 15219 - 15177
Alignment:
Q  497 ttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    ||||| ||||||||||||||||| |||||||||||||||||||    
T  15219 ttaaaaagctttattttaactttgttttaaagtagcttttaga 15177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1793 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold1793
Description:

Target: scaffold1793; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 496 - 539
Target Start/End: Complemental strand, 228 - 185
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| ||||||||||||||||| |||||||||| ||||||||    
T  228 cttaaagagctttattttaactttgttttaaagtaacttttaga 185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 496 - 539
Target Start/End: Original strand, 25823 - 25866
Alignment:
Q  496 cttaaatagctttattttaactttattttaaagtagcttttaga 539  Q
    |||||| || |||||||||||||| |||||||||||||||||||    
T  25823 cttaaagagttttattttaactttgttttaaagtagcttttaga 25866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 321 - 447
Target Start/End: Complemental strand, 90749 - 90623
Alignment:
Q  321 ggtggtggaaggtgtaaaagaaataatctagtgttgaaagtgtaccatatgattgtgttcttcaattaatctaatgactaaagttaactttcccatggtg 420  Q
    ||||||||||| |||||||||||||||||||||| || || |||  ||| || |||||| || | || |||||| |    || | |||||||| ||||||    
T  90749 ggtggtggaagatgtaaaagaaataatctagtgtggagagagtattataagaatgtgtttttgatttgatctaaaggtccaaataaactttcctatggtg 90650  T
Q  421 ggaatggattaacctttcccatgtgaa 447  Q
    | ||  |||| ||||||||||||||||    
T  90649 gaaaatgattcacctttcccatgtgaa 90623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 505 - 542
Target Start/End: Complemental strand, 7527 - 7490
Alignment:
Q  505 ctttattttaactttattttaaagtagcttttagatcg 542  Q
    ||||||||||||||| ||||||| ||||||||||||||    
T  7527 ctttattttaactttgttttaaaatagcttttagatcg 7490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 506 - 539
Target Start/End: Complemental strand, 90410 - 90377
Alignment:
Q  506 tttattttaactttattttaaagtagcttttaga 539  Q
    |||||||||||||| |||||||||||||||||||    
T  90410 tttattttaactttgttttaaagtagcttttaga 90377  T

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