View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4970_low_20 (Length: 394)

Name: NF4970_low_20
Description: NF4970
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4970_low_20
NF4970_low_20
[»] chr3 (21 HSPs)
chr3 (14-373)||(840547-840908)
chr3 (195-313)||(21974307-21974425)
chr3 (195-313)||(21996738-21996856)
chr3 (195-313)||(22157416-22157534)
chr3 (195-314)||(29014690-29014809)
chr3 (195-314)||(49040844-49040963)
chr3 (195-314)||(32677477-32677596)
chr3 (195-314)||(36737834-36737953)
chr3 (195-320)||(1351990-1352115)
chr3 (195-314)||(18997125-18997244)
chr3 (195-314)||(18999664-18999783)
chr3 (195-314)||(29371538-29371657)
chr3 (195-314)||(39518565-39518684)
chr3 (195-314)||(41349371-41349490)
chr3 (195-317)||(39528907-39529029)
chr3 (195-314)||(38855475-38855594)
chr3 (195-314)||(39806979-39807098)
chr3 (195-314)||(32840106-32840226)
chr3 (206-286)||(55367721-55367801)
chr3 (227-294)||(28228625-28228695)
chr3 (314-358)||(34805762-34805806)
[»] chr4 (18 HSPs)
chr4 (38-168)||(50234952-50235081)
chr4 (195-314)||(26025528-26025647)
chr4 (195-313)||(39482020-39482138)
chr4 (195-314)||(30469213-30469332)
chr4 (195-311)||(8955779-8955895)
chr4 (195-296)||(36971206-36971307)
chr4 (196-288)||(33108924-33109016)
chr4 (195-314)||(45590900-45591019)
chr4 (94-161)||(6071852-6071919)
chr4 (195-314)||(34334490-34334613)
chr4 (313-373)||(48007277-48007337)
chr4 (206-314)||(49162257-49162365)
chr4 (313-373)||(55157612-55157672)
chr4 (195-314)||(18835865-18835984)
chr4 (195-296)||(33288422-33288524)
chr4 (227-303)||(50774069-50774145)
chr4 (313-358)||(13557448-13557493)
chr4 (321-371)||(8179903-8179953)
[»] chr8 (14 HSPs)
chr8 (195-314)||(32183481-32183600)
chr8 (195-315)||(33837728-33837848)
chr8 (195-319)||(45334271-45334395)
chr8 (195-314)||(2508796-2508915)
chr8 (195-314)||(13469508-13469626)
chr8 (94-168)||(4905804-4905878)
chr8 (206-314)||(28379116-28379224)
chr8 (195-315)||(38495471-38495591)
chr8 (234-317)||(9740183-9740266)
chr8 (196-322)||(2626230-2626355)
chr8 (195-314)||(25106369-25106488)
chr8 (94-161)||(26723448-26723515)
chr8 (256-303)||(29598605-29598652)
chr8 (316-358)||(8051921-8051963)
[»] chr7 (30 HSPs)
chr7 (196-317)||(48049161-48049283)
chr7 (195-298)||(12252230-12252333)
chr7 (209-314)||(46690035-46690140)
chr7 (208-314)||(9215463-9215569)
chr7 (196-313)||(31858093-31858210)
chr7 (195-302)||(5514937-5515044)
chr7 (198-303)||(33974655-33974760)
chr7 (206-314)||(6389893-6390001)
chr7 (195-314)||(17904321-17904440)
chr7 (195-314)||(22753068-22753187)
chr7 (195-314)||(26770337-26770456)
chr7 (195-314)||(46467335-46467454)
chr7 (195-315)||(6387691-6387811)
chr7 (195-314)||(9332478-9332598)
chr7 (195-314)||(29890826-29890945)
chr7 (195-296)||(29427182-29427283)
chr7 (195-314)||(4405267-4405386)
chr7 (195-314)||(31502653-31502773)
chr7 (195-315)||(37179330-37179451)
chr7 (215-297)||(7839234-7839316)
chr7 (313-358)||(4125481-4125526)
chr7 (313-358)||(9691071-9691116)
chr7 (245-294)||(19523813-19523862)
chr7 (208-296)||(33379007-33379095)
chr7 (195-294)||(9876421-9876520)
chr7 (313-359)||(13298776-13298822)
chr7 (195-277)||(41921892-41921973)
chr7 (165-194)||(7839176-7839205)
chr7 (282-314)||(12252069-12252101)
chr7 (282-314)||(31858339-31858371)
[»] chr2 (9 HSPs)
chr2 (195-314)||(21727830-21727949)
chr2 (195-314)||(15233913-15234032)
chr2 (195-296)||(35792925-35793026)
chr2 (195-315)||(41252573-41252694)
chr2 (195-315)||(43040848-43040968)
chr2 (195-314)||(44104546-44104666)
chr2 (196-303)||(41643053-41643160)
chr2 (313-373)||(32447888-32447948)
chr2 (195-295)||(31903400-31903499)
[»] chr1 (17 HSPs)
chr1 (195-314)||(37875727-37875845)
chr1 (195-313)||(1236071-1236189)
chr1 (195-315)||(4055642-4055762)
chr1 (195-309)||(49112282-49112393)
chr1 (195-314)||(47669277-47669396)
chr1 (195-314)||(10737701-10737820)
chr1 (195-314)||(39241310-39241429)
chr1 (195-314)||(46220417-46220536)
chr1 (195-312)||(3384597-3384714)
chr1 (195-303)||(4817427-4817535)
chr1 (195-311)||(9831661-9831777)
chr1 (195-314)||(48564975-48565094)
chr1 (195-314)||(8889600-8889720)
chr1 (313-373)||(52053850-52053910)
chr1 (195-270)||(26842598-26842673)
chr1 (234-294)||(18127047-18127107)
chr1 (323-371)||(18459582-18459630)
[»] chr6 (10 HSPs)
chr6 (195-314)||(29452542-29452661)
chr6 (209-314)||(18742119-18742223)
chr6 (195-314)||(2543239-2543358)
chr6 (195-295)||(7156256-7156356)
chr6 (206-314)||(32274603-32274711)
chr6 (195-314)||(27312114-27312235)
chr6 (241-314)||(786525-786597)
chr6 (195-314)||(31170990-31171109)
chr6 (214-296)||(5008308-5008390)
chr6 (250-314)||(8504733-8504797)
[»] chr5 (16 HSPs)
chr5 (195-314)||(29875112-29875231)
chr5 (195-314)||(4695162-4695281)
chr5 (195-302)||(4939680-4939787)
chr5 (195-315)||(12398945-12399065)
chr5 (227-303)||(19574876-19574952)
chr5 (195-314)||(22645909-22646028)
chr5 (195-314)||(23090456-23090575)
chr5 (195-314)||(34208696-34208815)
chr5 (195-303)||(22528163-22528270)
chr5 (195-296)||(4145852-4145953)
chr5 (245-318)||(42757801-42757874)
chr5 (195-303)||(3077755-3077863)
chr5 (195-303)||(12096214-12096321)
chr5 (210-286)||(594124-594200)
chr5 (197-303)||(32144285-32144392)
chr5 (313-358)||(8383971-8384016)
[»] scaffold0103 (1 HSPs)
scaffold0103 (195-296)||(44778-44877)
[»] scaffold0276 (1 HSPs)
scaffold0276 (313-358)||(2092-2137)


Alignment Details
Target: chr3 (Bit Score: 331; Significance: 0; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 331; E-Value: 0
Query Start/End: Original strand, 14 - 373
Target Start/End: Original strand, 840547 - 840908
Alignment:
Q  14 gcagagatggttgtagagactgtggaga--gaggggaaatgttttggcgggatgggatgagtcacagattttgaccacatgacagtgtgtgattggataa 111  Q
    |||||||||| |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  840547 gcagagatggctgtagagactgtggagagagaggggaaatgttttggcgggatgggatgagtcacagattttgaccgcatggcagtgtgtgattggataa 840646  T
Q  112 tgaagggtgtatgtaaagtggtatgaaaaaagggtgttcatggataattaccctaaaattattaaaggagttgtgacatttgggaatttaatcctaaata 211  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  840647 tgaaaggtgtatgtaaagtggtatgaaaaaagggtgttcatggataattaccctaaaattattaaaggagttgtgacatttgggaatttaatcctaaata 840746  T
Q  212 aggacattttagtccaaaacatacaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaacatcaaaagataaaaaatggaggga 311  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  840747 aggacattttagtccaaaacatacaaatttttctatactttaattatttcttaagacttgtgccaagagttaaaacatcaaaagataaaaaatggaggga 840846  T
Q  312 gtacaatatattaataatttacacagtgaatattttttattctaatacgcacccgtagtcga 373  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  840847 gtacaatatattaataatttacacagtgaatattttttattctaatacgcacccgtagtcga 840908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 195 - 313
Target Start/End: Original strand, 21974307 - 21974425
Alignment:
Q  195 gaatttaatcctaaataaggacattttagtccaaaacatacaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaacatcaaaa 294  Q
    ||||||||| ||||||||||| ||||||||| |||| | |||||| ||| ||||||||||||| | ||||| ||||||||||||||||||||||||||||    
T  21974307 gaatttaatactaaataaggatattttagtcaaaaatagacaaatatttatatactttaattactccttaaaacttgtgtcaagagttaaaacatcaaaa 21974406  T
Q  295 gataaaaaatggagggagt 313  Q
    || || |||||||||||||    
T  21974407 gaaaataaatggagggagt 21974425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 195 - 313
Target Start/End: Original strand, 21996738 - 21996856
Alignment:
Q  195 gaatttaatcctaaataaggacattttagtccaaaacatacaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaacatcaaaa 294  Q
    ||||||||| ||||||||||| ||||||||| |||| | |||||| ||| ||||||||||||| | ||||| ||||||||||||||||||||||||||||    
T  21996738 gaatttaatactaaataaggatattttagtcaaaaatagacaaatatttatatactttaattactccttaaaacttgtgtcaagagttaaaacatcaaaa 21996837  T
Q  295 gataaaaaatggagggagt 313  Q
    || || |||||||||||||    
T  21996838 gaaaataaatggagggagt 21996856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 195 - 313
Target Start/End: Original strand, 22157416 - 22157534
Alignment:
Q  195 gaatttaatcctaaataaggacattttagtccaaaacatacaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaacatcaaaa 294  Q
    ||||||||| ||||||||||||||||||||| |||| | |||||| ||| ||||||||||||| | ||||| |||||||||||||| |||||||||||||    
T  22157416 gaatttaatactaaataaggacattttagtcaaaaatagacaaatatttatatactttaattactccttaaaacttgtgtcaagagctaaaacatcaaaa 22157515  T
Q  295 gataaaaaatggagggagt 313  Q
    || || |||||||||||||    
T  22157516 gaaaataaatggagggagt 22157534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 195 - 314
Target Start/End: Complemental strand, 29014809 - 29014690
Alignment:
Q  195 gaatttaatcctaaataaggacattttagtccaaaacatacaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaacatcaaaa 294  Q
    |||||||||  ||||||||||||||| |||  |||||| |||||| ||| ||||||||||||| ||||||| |||||||||||||| |||||||||||||    
T  29014809 gaatttaatgataaataaggacatttaagtaaaaaacacacaaatgtttatatactttaattacttcttaaaacttgtgtcaagagctaaaacatcaaaa 29014710  T
Q  295 gataaaaaatggagggagta 314  Q
    || ||  |||||||||||||    
T  29014709 gaaaaggaatggagggagta 29014690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 195 - 314
Target Start/End: Complemental strand, 49040963 - 49040844
Alignment:
Q  195 gaatttaatcctaaataaggacattttagtccaaaacatacaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaacatcaaaa 294  Q
    |||||||||| |||| ||||||||||||||| ||||||||||||| ||||||||  ||||||| | || |||||||||| || ||| |||||||||||||    
T  49040963 gaatttaatcataaacaaggacattttagtctaaaacatacaaatatttctataacttaattactcctcaagacttgtgccaggagctaaaacatcaaaa 49040864  T
Q  295 gataaaaaatggagggagta 314  Q
    ||||||||  ||||||||||    
T  49040863 gataaaaagcggagggagta 49040844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 195 - 314
Target Start/End: Complemental strand, 32677596 - 32677477
Alignment:
Q  195 gaatttaatcctaaataaggacattttagtccaaaacatacaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaacatcaaaa 294  Q
    |||||||||  ||||||||||||||| |||  |||||| |||||| ||| ||||||||||||| | ||||| |||||||||||||| |||||||||||||    
T  32677596 gaatttaatgataaataaggacatttaagtaaaaaacacacaaatgtttatatactttaattactccttaaaacttgtgtcaagagctaaaacatcaaaa 32677497  T
Q  295 gataaaaaatggagggagta 314  Q
    || ||  |||||||||||||    
T  32677496 gaaaatgaatggagggagta 32677477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 195 - 314
Target Start/End: Complemental strand, 36737953 - 36737834
Alignment:
Q  195 gaatttaatcctaaataaggacattttagtccaaaacatacaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaacatcaaaa 294  Q
    |||||||||  |||||||||| |||| |||  |||||| |||||| ||| ||||||||||||||| ||||| |||||||||||||| |||||||||||||    
T  36737953 gaatttaatgataaataaggatatttaagtaaaaaacacacaaatgtttatatactttaattattccttaaaacttgtgtcaagagctaaaacatcaaaa 36737854  T
Q  295 gataaaaaatggagggagta 314  Q
    || ||  |||||||||||||    
T  36737853 gaaaaggaatggagggagta 36737834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 195 - 320
Target Start/End: Complemental strand, 1352115 - 1351990
Alignment:
Q  195 gaatttaatcctaaataaggacattttagtccaaaacatacaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaacatcaaaa 294  Q
    |||||||||  ||||||||||||||| |||  |||| | |||||| ||| ||||||||||||| | ||||| |||||||||||||| |||||||||||||    
T  1352115 gaatttaatgataaataaggacatttaagtaaaaaatacacaaatatttatatactttaattactccttaaaacttgtgtcaagagctaaaacatcaaaa 1352016  T
Q  295 gataaaaaatggagggagtacaatat 320  Q
    || ||  |||||||||||||| ||||    
T  1352015 gaaaaggaatggagggagtactatat 1351990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 195 - 314
Target Start/End: Original strand, 18997125 - 18997244
Alignment:
Q  195 gaatttaatcctaaataaggacattttagtccaaaacatacaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaacatcaaaa 294  Q
    |||||||||  ||||||||||||||| |||  |||||  |||||| ||| ||||||||||||| | ||||| |||||||||||||| |||||||||||||    
T  18997125 gaatttaatgataaataaggacatttaagtaaaaaacgcacaaatgtttatatactttaattactccttaaaacttgtgtcaagagctaaaacatcaaaa 18997224  T
Q  295 gataaaaaatggagggagta 314  Q
    || ||  |||||||||||||    
T  18997225 gaaaaggaatggagggagta 18997244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 195 - 314
Target Start/End: Original strand, 18999664 - 18999783
Alignment:
Q  195 gaatttaatcctaaataaggacattttagtccaaaacatacaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaacatcaaaa 294  Q
    |||||||||  ||||||||||||||| |||  |||||  |||||| ||| ||||||||||||| | ||||| |||||||||||||| |||||||||||||    
T  18999664 gaatttaatgataaataaggacatttaagtaaaaaacgcacaaatgtttatatactttaattactccttaaaacttgtgtcaagagctaaaacatcaaaa 18999763  T
Q  295 gataaaaaatggagggagta 314  Q
    || ||  |||||||||||||    
T  18999764 gaaaaggaatggagggagta 18999783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 195 - 314
Target Start/End: Complemental strand, 29371657 - 29371538
Alignment:
Q  195 gaatttaatcctaaataaggacattttagtccaaaacatacaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaacatcaaaa 294  Q
    |||||||||  ||||||||||||||| |||  |||||| |||||| ||| ||||||||||||| | ||||| | |||||||||||| |||||||||||||    
T  29371657 gaatttaatgataaataaggacatttaagtaaaaaacacacaaatgtttatatactttaattactccttaaaatttgtgtcaagagctaaaacatcaaaa 29371558  T
Q  295 gataaaaaatggagggagta 314  Q
    || ||  |||||||||||||    
T  29371557 gaaaatgaatggagggagta 29371538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 195 - 314
Target Start/End: Original strand, 39518565 - 39518684
Alignment:
Q  195 gaatttaatcctaaataaggacattttagtccaaaacatacaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaacatcaaaa 294  Q
    |||||||||  ||||||||||||||| |||  |||||| |||||| ||| ||||||||||||| |  |||| |||||||||||||| |||||||||||||    
T  39518565 gaatttaatgataaataaggacatttaagtaaaaaacacacaaatgtttatatactttaattactcattaaaacttgtgtcaagagctaaaacatcaaaa 39518664  T
Q  295 gataaaaaatggagggagta 314  Q
    || ||  |||||||||||||    
T  39518665 gaaaaggaatggagggagta 39518684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 195 - 314
Target Start/End: Complemental strand, 41349490 - 41349371
Alignment:
Q  195 gaatttaatcctaaataaggacattttagtccaaaacatacaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaacatcaaaa 294  Q
    |||||||||  ||||||||||||||| |||  |||| | |||||| ||| ||||||||||||| | ||||| |||||||||||||| |||||||||||||    
T  41349490 gaatttaatgataaataaggacatttaagtaaaaaatacacaaatgtttatatactttaattactccttaaaacttgtgtcaagagctaaaacatcaaaa 41349391  T
Q  295 gataaaaaatggagggagta 314  Q
    || ||  |||||||||||||    
T  41349390 gaaaaggaatggagggagta 41349371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 195 - 317
Target Start/End: Original strand, 39528907 - 39529029
Alignment:
Q  195 gaatttaatcctaaataaggacattttagtccaaaacatacaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaacatcaaaa 294  Q
    |||||||||  ||||||||||||||| |||  |||| | |||||| ||| ||||||||||||| | ||||| ||||||||||| || |||||||||||||    
T  39528907 gaatttaatgataaataaggacatttaagtaaaaaatacacaaatgtttatatactttaattactccttaaaacttgtgtcaaaagctaaaacatcaaaa 39529006  T
Q  295 gataaaaaatggagggagtacaa 317  Q
    || ||  ||||||||||||||||    
T  39529007 gaaaaggaatggagggagtacaa 39529029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 195 - 314
Target Start/End: Original strand, 38855475 - 38855594
Alignment:
Q  195 gaatttaatcctaaataaggacattttagtccaaaacatacaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaacatcaaaa 294  Q
    |||||||||  |||||||||||||||||||  ||| || |||||| ||| |||| |||||||| | ||||| ||||||| ||| || |||||||||||||    
T  38855475 gaatttaatgataaataaggacattttagtaaaaatcacacaaatatttatatattttaattactccttaaaacttgtgccaatagctaaaacatcaaaa 38855574  T
Q  295 gataaaaaatggagggagta 314  Q
    || ||  |||||||||||||    
T  38855575 gaaaaggaatggagggagta 38855594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 195 - 314
Target Start/End: Complemental strand, 39807098 - 39806979
Alignment:
Q  195 gaatttaatcctaaataaggacattttagtccaaaacatacaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaacatcaaaa 294  Q
    |||||||||  |||||||| |||||| |||  |||| | |||||| ||| ||||||||||||| | ||||| |||||||||||||| |||||||||||||    
T  39807098 gaatttaatgataaataagaacatttaagtaaaaaatacacaaatatttatatactttaattactccttaaaacttgtgtcaagagctaaaacatcaaaa 39806999  T
Q  295 gataaaaaatggagggagta 314  Q
    || ||  |||| ||||||||    
T  39806998 gaaaaggaatgaagggagta 39806979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 195 - 314
Target Start/End: Original strand, 32840106 - 32840226
Alignment:
Q  195 gaatttaatcctaaataaggacattttagtccaaaa-catacaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaacatcaaa 293  Q
    |||||||||  |||||||| |||||| |||  |||| || |||||| ||| ||||||||||||| | ||||| |||||||||||||| ||||| ||||||    
T  32840106 gaatttaatgataaataagaacatttaagtaaaaaaacacacaaatgtttatatactttaattactccttaaaacttgtgtcaagagctaaaatatcaaa 32840205  T
Q  294 agataaaaaatggagggagta 314  Q
    ||| ||  |||||||||||||    
T  32840206 agaaaatgaatggagggagta 32840226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 286
Target Start/End: Original strand, 55367721 - 55367801
Alignment:
Q  206 taaataaggacattttagtccaaaacatacaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaa 286  Q
    ||||||||||||||| |||  |||| | |||||| ||| ||||||||||||| | ||||| |||||| ||||||| |||||    
T  55367721 taaataaggacatttaagtaaaaaatacacaaatatttatatactttaattactccttaaaacttgtatcaagagctaaaa 55367801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 227 - 294
Target Start/End: Original strand, 28228625 - 28228695
Alignment:
Q  227 aaaacatacaaatttttctatactttaattatt---tcttaagacttgtgtcaagagttaaaacatcaaaa 294  Q
    |||||| |||||| ||| ||||||||||| |||   |||||| ||||||||||||||  ||||||||||||    
T  28228625 aaaacacacaaatgtttatatactttaataattacttcttaaaacttgtgtcaagagccaaaacatcaaaa 28228695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 314 - 358
Target Start/End: Complemental strand, 34805806 - 34805762
Alignment:
Q  314 acaatatattaataatttacacagtgaatattttttattctaata 358  Q
    ||||||||||||||||||| ||| ||| |||||| ||||||||||    
T  34805806 acaatatattaataatttatacaatgagtattttatattctaata 34805762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 111; Significance: 6e-56; HSPs: 18)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 38 - 168
Target Start/End: Complemental strand, 50235081 - 50234952
Alignment:
Q  38 gagagaggggaaatgttttggcgggatgggatgagtcacagattttgaccacatgacagtgtgtgattggataatgaagggtgtatgtaaagtggtatga 137  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  50235081 gagagaggggaaatgttttggcgggatgggatgagtcaaagattttgaccacatggcagtgtgtgattggataatgaagggtgtatgtaaagtggtatga 50234982  T
Q  138 aaaaagggtgttcatggataattaccctaaa 168  Q
     ||||||||||||||||||||||| ||||||    
T  50234981 -aaaagggtgttcatggataattatcctaaa 50234952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 195 - 314
Target Start/End: Complemental strand, 26025647 - 26025528
Alignment:
Q  195 gaatttaatcctaaataaggacattttagtccaaaacatacaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaacatcaaaa 294  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| | | ||||||||||| |||||| |||||||||||||    
T  26025647 gaatttaatcataaataaggacattttagtccaaaacatacaaatatttctatactttaattactccctaagacttgtgccaagagctaaaacatcaaaa 26025548  T
Q  295 gataaaaaatggagggagta 314  Q
    ||||||||| ||||||||||    
T  26025547 gataaaaaacggagggagta 26025528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 195 - 313
Target Start/End: Original strand, 39482020 - 39482138
Alignment:
Q  195 gaatttaatcctaaataaggacattttagtccaaaacatacaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaacatcaaaa 294  Q
    ||||||||| ||||||||||||||||||||| |||| | |||||| ||| ||||||||||||| | ||||| |||||||||||||| |||||||||||||    
T  39482020 gaatttaatactaaataaggacattttagtcaaaaatacacaaatatttatatactttaattactccttaaaacttgtgtcaagagctaaaacatcaaaa 39482119  T
Q  295 gataaaaaatggagggagt 313  Q
    || || |||||||||||||    
T  39482120 gaaaagaaatggagggagt 39482138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 195 - 314
Target Start/End: Complemental strand, 30469332 - 30469213
Alignment:
Q  195 gaatttaatcctaaataaggacattttagtccaaaacatacaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaacatcaaaa 294  Q
    |||||||||  |||| || ||||||| |||  |||| | |||||| ||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  30469332 gaatttaatgataaacaatgacatttaagtaaaaaatacacaaatatttatatactttaattacttcttaaaacttgtgtcaagagttaaaacatcaaaa 30469233  T
Q  295 gataaaaaatggagggagta 314  Q
    || || ||||| ||||||||    
T  30469232 gaaaagaaatgaagggagta 30469213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 195 - 311
Target Start/End: Complemental strand, 8955895 - 8955779
Alignment:
Q  195 gaatttaatcctaaataaggacattttagtccaaaacatacaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaacatcaaaa 294  Q
    |||||||||  ||||||||||||||| |||  |||| | |||||| ||| ||||||||||||| | ||||| |||||||||||||| |||||||||||||    
T  8955895 gaatttaatgataaataaggacatttaagtaaaaaatacacaaatgtttatatactttaattactccttaaaacttgtgtcaagagctaaaacatcaaaa 8955796  T
Q  295 gataaaaaatggaggga 311  Q
    || ||  ||||||||||    
T  8955795 gaaaaggaatggaggga 8955779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 195 - 296
Target Start/End: Original strand, 36971206 - 36971307
Alignment:
Q  195 gaatttaatcctaaataaggacattttagtccaaaacatacaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaacatcaaaa 294  Q
    |||||||||  |||||||||| |||| |||  |||||| |||||| ||| ||||||||||||| ||||||| ||||||||||| || |||||||||||||    
T  36971206 gaatttaatgataaataaggatatttaagtaaaaaacacacaaatgtttatatactttaattacttcttaaaacttgtgtcaaaagctaaaacatcaaaa 36971305  T
Q  295 ga 296  Q
    ||    
T  36971306 ga 36971307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 196 - 288
Target Start/End: Complemental strand, 33109016 - 33108924
Alignment:
Q  196 aatttaatcctaaataaggacattttagtccaaaacatacaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaaca 288  Q
    ||||||||  |||||||| |  ||||||  ||||||||| |||| ||| |||| |||||||||||||||||||||||||||||||||||||||    
T  33109016 aatttaattataaataagaattttttagctcaaaacatagaaatatttatataatttaattatttcttaagacttgtgtcaagagttaaaaca 33108924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 195 - 314
Target Start/End: Original strand, 45590900 - 45591019
Alignment:
Q  195 gaatttaatcctaaataaggacattttagtccaaaacatacaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaacatcaaaa 294  Q
    |||||||||  |||||||| |||||| |||  |||||| |||||| ||| ||||||||||||| | ||||  |||| ||||||||| |||||||||||||    
T  45590900 gaatttaatgataaataagaacatttaagtaaaaaacacacaaatgtttatatactttaattactccttacaacttatgtcaagagctaaaacatcaaaa 45590999  T
Q  295 gataaaaaatggagggagta 314  Q
    || ||  |||||||||||||    
T  45591000 gaaaatgaatggagggagta 45591019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 94 - 161
Target Start/End: Original strand, 6071852 - 6071919
Alignment:
Q  94 cagtgtgtgattggataatgaagggtgtatgtaaagtggtatgaaaaaagggtgttcatggataatta 161  Q
    ||||||||||||| |||||||| ||||| | |||||||||||||||| |||||||| |||||||||||    
T  6071852 cagtgtgtgattgaataatgaaaggtgtgtataaagtggtatgaaaagagggtgtttatggataatta 6071919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 195 - 314
Target Start/End: Original strand, 34334490 - 34334613
Alignment:
Q  195 gaatttaatcctaaataaggacattttagtccaaaacatacaaatttttct---atactttaattatttcttaagacttgtgtcaagagttaaaacatca 291  Q
    |||||||||  ||||||| ||||||| |||  ||||||||||||| ||| |   |||||||||||| | |||||||||||||| ||||||| || |||||    
T  34334490 gaatttaatgataaataaagacatttaagtaaaaaacatacaaatgtttattatatactttaattactccttaagacttgtgttaagagtttaatcatca 34334589  T
Q  292 aaagataaa-aaatggagggagta 314  Q
    ||||| |||  |||||||||||||    
T  34334590 aaagaaaaaggaatggagggagta 34334613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 313 - 373
Target Start/End: Original strand, 48007277 - 48007337
Alignment:
Q  313 tacaatatattaataatttacacagtgaatattttttattctaatacgcacccgtagtcga 373  Q
    |||||||||||||||||||| ||| |||||||||| |||||||||| || |||||||||||    
T  48007277 tacaatatattaataatttatacaatgaatattttatattctaatatgcccccgtagtcga 48007337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 206 - 314
Target Start/End: Original strand, 49162257 - 49162365
Alignment:
Q  206 taaataaggacattttagtccaaaacatacaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaacatcaaaagataaaaaatg 305  Q
    |||||||||||||||||||  ||| || |||||| ||| ||||||||||||| |  |||| ||||||| ||| || ||||||||||||||| |   ||||    
T  49162257 taaataaggacattttagtaaaaatcacacaaatatttatatactttaattactctttaaaacttgtgccaatagctaaaacatcaaaagaaagggaatg 49162356  T
Q  306 gagggagta 314  Q
    |||||||||    
T  49162357 gagggagta 49162365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 313 - 373
Target Start/End: Complemental strand, 55157672 - 55157612
Alignment:
Q  313 tacaatatattaataatttacacagtgaatattttttattctaatacgcacccgtagtcga 373  Q
    ||||||||||||| |||||| ||| |||||||||| ||||||||||||| |||||||||||    
T  55157672 tacaatatattaacaatttatacaatgaatattttatattctaatacgcccccgtagtcga 55157612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 195 - 314
Target Start/End: Original strand, 18835865 - 18835984
Alignment:
Q  195 gaatttaatcctaaataaggacattttagtccaaaacatacaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaacatcaaaa 294  Q
    |||||||||  |||||||||||||||||||  |||||| |||||| ||| |||| |||||||| | ||||| | |||||  || || |||||||||||||    
T  18835865 gaatttaatgataaataaggacattttagttaaaaacacacaaatatttatatattttaattactccttaaaatttgtgcgaaaagataaaacatcaaaa 18835964  T
Q  295 gataaaaaatggagggagta 314  Q
     | || ||||||| ||||||    
T  18835965 taaaataaatggaaggagta 18835984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 195 - 296
Target Start/End: Complemental strand, 33288524 - 33288422
Alignment:
Q  195 gaatttaatcctaaataaggacattttagtccaaaac-atacaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaacatcaaa 293  Q
    |||||||||  ||||||||||||||| |||  ||||  | |||||| ||| ||||||||||||| | ||||| ||||||||||| || ||||||||||||    
T  33288524 gaatttaatgataaataaggacatttaagtaaaaaaatacacaaatgtttatatactttaattactccttaaaacttgtgtcaatagctaaaacatcaaa 33288425  T
Q  294 aga 296  Q
    |||    
T  33288424 aga 33288422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 227 - 303
Target Start/End: Complemental strand, 50774145 - 50774069
Alignment:
Q  227 aaaacatacaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaacatcaaaagataaaaaa 303  Q
    |||||| |||||| ||| ||||||||||||| | ||||| |||||||||||||| |||||||| |||| | ||||||    
T  50774145 aaaacacacaaatatttatatactttaattactccttaaaacttgtgtcaagagctaaaacataaaaaaaaaaaaaa 50774069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 313 - 358
Target Start/End: Complemental strand, 13557493 - 13557448
Alignment:
Q  313 tacaatatattaataatttacacagtgaatattttttattctaata 358  Q
    ||||||||| |||||||||||||| |||||||||| ||||||||||    
T  13557493 tacaatatactaataatttacacaatgaatattttatattctaata 13557448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 371
Target Start/End: Original strand, 8179903 - 8179953
Alignment:
Q  321 attaataatttacacagtgaatattttttattctaatacgcacccgtagtc 371  Q
    |||||||||||| ||| |||||||||| ||||||||||||| | |||||||    
T  8179903 attaataatttatacaatgaatattttatattctaatacgctctcgtagtc 8179953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 92; Significance: 1e-44; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 195 - 314
Target Start/End: Complemental strand, 32183600 - 32183481
Alignment:
Q  195 gaatttaatcctaaataaggacattttagtccaaaacatacaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaacatcaaaa 294  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||| ||||||||| | ||||||||||||| |||||| |||||||||||||    
T  32183600 gaatttaatcataaataaggacattttagtccaaaacatacaaatatttctatgctttaattactccttaagacttgtgccaagagctaaaacatcaaaa 32183501  T
Q  295 gataaaaaatggagggagta 314  Q
    ||||||||||||||||||||    
T  32183500 gataaaaaatggagggagta 32183481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 195 - 315
Target Start/End: Complemental strand, 33837848 - 33837728
Alignment:
Q  195 gaatttaatcctaaataaggacattttagtccaaaacatacaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaacatcaaaa 294  Q
    |||||||||  ||||||||||||||| |||  |||| | |||||| ||| ||||||||||||| | ||||| |||||||||||||| |||||||||||||    
T  33837848 gaatttaatgataaataaggacatttaagtaaaaaatacacaaatgtttatatactttaattactccttaaaacttgtgtcaagagctaaaacatcaaaa 33837749  T
Q  295 gataaaaaatggagggagtac 315  Q
    || ||  ||||||||||||||    
T  33837748 gaaaaggaatggagggagtac 33837728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 195 - 319
Target Start/End: Complemental strand, 45334395 - 45334271
Alignment:
Q  195 gaatttaatcctaaataaggacattttagtccaaaacatacaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaacatcaaaa 294  Q
    |||||||||  ||||||||||||||| |||  |||| | |||||| ||| ||||||||||||| | ||||| |||||||||||||| |||||||||||||    
T  45334395 gaatttaatgataaataaggacatttaagtaaaaaatacacaaatgtttatatactttaattactccttaaaacttgtgtcaagagctaaaacatcaaaa 45334296  T
Q  295 gataaaaaatggagggagtacaata 319  Q
    || ||  ||||||||||||| ||||    
T  45334295 gaaaaggaatggagggagtaaaata 45334271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 195 - 314
Target Start/End: Complemental strand, 2508915 - 2508796
Alignment:
Q  195 gaatttaatcctaaataaggacattttagtccaaaacatacaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaacatcaaaa 294  Q
    |||||||||  ||||||||||||||| |||  |||| | |||||| ||| ||||||||||||| | ||||| |||||||||||||| |||||||||||||    
T  2508915 gaatttaatgataaataaggacatttaagtaaaaaatacacaaatgtttatatactttaattactccttaaaacttgtgtcaagagctaaaacatcaaaa 2508816  T
Q  295 gataaaaaatggagggagta 314  Q
    || || |||| || ||||||    
T  2508815 gaaaagaaattgatggagta 2508796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 195 - 314
Target Start/End: Complemental strand, 13469626 - 13469508
Alignment:
Q  195 gaatttaatcctaaataaggacattttagtccaaaacatacaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaacatcaaaa 294  Q
    |||||||||  ||||||||||||||| ||   |||||| |||||| ||| ||||||||||||| | ||||| ||||||||||||||||||||||||||||    
T  13469626 gaatttaatgataaataaggacatttaagga-aaaacacacaaatatttatatactttaattactccttaaaacttgtgtcaagagttaaaacatcaaaa 13469528  T
Q  295 gataaaaaatggagggagta 314  Q
    || ||  |||||| ||||||    
T  13469527 gaaaaggaatggaaggagta 13469508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 94 - 168
Target Start/End: Original strand, 4905804 - 4905878
Alignment:
Q  94 cagtgtgtgattggataatgaagggtgtatgtaaagtggtatgaaaaaagggtgttcatggataattaccctaaa 168  Q
    ||||||||||||| |||||||||||||| | || |||||||||||||||||||||||||| ||||||| ||||||    
T  4905804 cagtgtgtgattgaataatgaagggtgtgtatagagtggtatgaaaaaagggtgttcatgaataattagcctaaa 4905878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 206 - 314
Target Start/End: Original strand, 28379116 - 28379224
Alignment:
Q  206 taaataaggacattttagtccaaaacatacaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaacatcaaaagataaaaaatg 305  Q
    ||||||||||||||| |||  |||||  |||||| ||| ||||||||||| | | ||||| |||||||||||||| ||||||||||||||| ||  ||||    
T  28379116 taaataaggacatttaagtaaaaaacgcacaaatgtttatatactttaatcactccttaaaacttgtgtcaagagctaaaacatcaaaagaaaaggaatg 28379215  T
Q  306 gagggagta 314  Q
    |||||||||    
T  28379216 gagggagta 28379224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 195 - 315
Target Start/End: Complemental strand, 38495591 - 38495471
Alignment:
Q  195 gaatttaatcctaaataaggacattttagtccaaaacatacaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaacatcaaaa 294  Q
    |||||||||  |||||||||| |||| |||  |||||| |||||| ||| |||| |||||||| | ||||| |||| ||||||||| |||||||||||||    
T  38495591 gaatttaatgataaataaggatatttaagtaaaaaacacacaaatgtttatatattttaattactccttaaaacttatgtcaagagctaaaacatcaaaa 38495492  T
Q  295 gataaaaaatggagggagtac 315  Q
    || ||  ||||||||||||||    
T  38495491 gaaaatgaatggagggagtac 38495471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 234 - 317
Target Start/End: Original strand, 9740183 - 9740266
Alignment:
Q  234 acaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaacatcaaaagataaaaaatggagggagtacaa 317  Q
    |||||| ||| ||||||||||||| | | ||| |||||||||||||||||||||||||||||| ||  ||||||||||||||||    
T  9740183 acaaatgtttatatactttaattactccctaaaacttgtgtcaagagttaaaacatcaaaagaaaaggaatggagggagtacaa 9740266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 196 - 322
Target Start/End: Complemental strand, 2626355 - 2626230
Alignment:
Q  196 aatttaatcctaaataaggacattttagtccaaaacatacaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaacatcaaaag 295  Q
    ||||||||  ||||||||||||||| | |  |||||| |||||| ||| ||||||||||||| | ||||| |||||||||||||| ||||||||||||||    
T  2626355 aatttaatgataaataaggacatttaaata-aaaacacacaaatgtttatatactttaattactccttaaaacttgtgtcaagagctaaaacatcaaaag 2626257  T
Q  296 ataaaaaatggagggagtacaatatat 322  Q
    | |||  |||||  ||||||| |||||    
T  2626256 aaaaaggatggatagagtacattatat 2626230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 195 - 314
Target Start/End: Original strand, 25106369 - 25106488
Alignment:
Q  195 gaatttaatcctaaataaggacattttagtccaaaacatacaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaacatcaaaa 294  Q
    |||||||||  |||||||||| |||| | |  |||||| |||| | ||| ||||||||||||| | ||||| ||||||||||| || |||||||||||||    
T  25106369 gaatttaatgataaataaggaaatttaaataaaaaacacacaagtgtttatatactttaattactccttaaaacttgtgtcaaaagctaaaacatcaaaa 25106468  T
Q  295 gataaaaaatggagggagta 314  Q
    || ||  |||||||||||||    
T  25106469 gaaaaggaatggagggagta 25106488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 94 - 161
Target Start/End: Complemental strand, 26723515 - 26723448
Alignment:
Q  94 cagtgtgtgattggataatgaagggtgtatgtaaagtggtatgaaaaaagggtgttcatggataatta 161  Q
    ||||||||||||| |||||||||| |||   || ||| ||| ||||||||||||||||||||||||||    
T  26723515 cagtgtgtgattgaataatgaaggatgtgcatagagtcgtaggaaaaaagggtgttcatggataatta 26723448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 256 - 303
Target Start/End: Original strand, 29598605 - 29598652
Alignment:
Q  256 tatttcttaagacttgtgtcaagagttaaaacatcaaaagataaaaaa 303  Q
    |||| ||||||||||  || ||||||||||||||||||||||||||||    
T  29598605 tattccttaagacttaagttaagagttaaaacatcaaaagataaaaaa 29598652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 316 - 358
Target Start/End: Original strand, 8051921 - 8051963
Alignment:
Q  316 aatatattaataatttacacagtgaatattttttattctaata 358  Q
    ||||||||||||||||| ||| |||||||||| ||||||||||    
T  8051921 aatatattaataatttatacaatgaatattttatattctaata 8051963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 83; Significance: 3e-39; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 196 - 317
Target Start/End: Original strand, 48049161 - 48049283
Alignment:
Q  196 aatttaatcctaaataaggacattttagtccaaaacatacaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaacatcaaaag 295  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||| | ||||||||||||| |||||| ||||||||||||||    
T  48049161 aatttaatcataaataaggacattttagtcaaaaacatacaaatatttctatactttaattactacttaagacttgtgccaagagctaaaacatcaaaag 48049260  T
Q  296 at-aaaaaatggagggagtacaa 317  Q
    || |||||| |||||||||||||    
T  48049261 ataaaaaaacggagggagtacaa 48049283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 195 - 298
Target Start/End: Original strand, 12252230 - 12252333
Alignment:
Q  195 gaatttaatcctaaataaggacattttagtccaaaacatacaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaacatcaaaa 294  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||| | ||||||||||||| |||| |||||||||||||||    
T  12252230 gaatttaatcataaataaggacattttagtccaaaacatacaaatatttctatacattaattactccttaagacttgtgccaagtgttaaaacatcaaaa 12252329  T
Q  295 gata 298  Q
    ||||    
T  12252330 gata 12252333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 209 - 314
Target Start/End: Original strand, 46690035 - 46690140
Alignment:
Q  209 ataaggacattttagtccaaaacatacaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaacatcaaaagataaaaaatggag 308  Q
    |||| |||||||||||||||||||||||||| ||| ||||||||||||| | ||||||| ||||| |||||| |||||||||||||||||||||||||||    
T  46690035 ataatgacattttagtccaaaacatacaaatatttatatactttaattactccttaagatttgtgccaagagctaaaacatcaaaagataaaaaatggag 46690134  T
Q  309 ggagta 314  Q
    ||||||    
T  46690135 ggagta 46690140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 208 - 314
Target Start/End: Complemental strand, 9215569 - 9215463
Alignment:
Q  208 aataaggacattttagtccaaaacatacaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaacatcaaaagataaaaaatgga 307  Q
    |||||||||||||||||||||||||||||||| ||| | ||||||||||| ||||||||| ||||  |||||| ||||||||||||||||||||||| ||    
T  9215569 aataaggacattttagtccaaaacatacaaatatttatgtactttaattacttcttaagatttgtaccaagagctaaaacatcaaaagataaaaaataga 9215470  T
Q  308 gggagta 314  Q
    |||||||    
T  9215469 gggagta 9215463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 196 - 313
Target Start/End: Complemental strand, 31858210 - 31858093
Alignment:
Q  196 aatttaatcctaaataaggacattttagtccaaaacatacaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaacatcaaaag 295  Q
    ||||||||| |||||||||| |||||| || ||||||||||||| ||| ||| ||||||||| | ||||||| |||||||||||||||||||||||||||    
T  31858210 aatttaatcataaataaggatattttaatcaaaaacatacaaatgtttatattctttaattactccttaagatttgtgtcaagagttaaaacatcaaaag 31858111  T
Q  296 ataaaaaatggagggagt 313  Q
    |||||||| ||| |||||    
T  31858110 ataaaaaacggaaggagt 31858093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 195 - 302
Target Start/End: Original strand, 5514937 - 5515044
Alignment:
Q  195 gaatttaatcctaaataaggacattttagtccaaaacatacaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaacatcaaaa 294  Q
    |||||||||| |||||||| |||||||||| |||||||||||||| ||| |||| ||||||||||  ||||||||||||||||||| ||| |||||||||    
T  5514937 gaatttaatcataaataagaacattttagtacaaaacatacaaatatttttatattttaattattcattaagacttgtgtcaagagctaatacatcaaaa 5515036  T
Q  295 gataaaaa 302  Q
    ||||||||    
T  5515037 gataaaaa 5515044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 198 - 303
Target Start/End: Original strand, 33974655 - 33974760
Alignment:
Q  198 tttaatcctaaataaggacattttagtccaaaacatacaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaacatcaaaagat 297  Q
    ||||||| |||||||||| |||||||||||| |||||| ||| ||||||||||||||||| | ||||||||||||| |||||| |||||| |||||||||    
T  33974655 tttaatcataaataaggatattttagtccaatacataccaatatttctatactttaattactccttaagacttgtgccaagagctaaaacgtcaaaagat 33974754  T
Q  298 aaaaaa 303  Q
    ||||||    
T  33974755 aaaaaa 33974760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 206 - 314
Target Start/End: Original strand, 6389893 - 6390001
Alignment:
Q  206 taaataaggacattttagtccaaaacatacaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaacatcaaaagataaaaaatg 305  Q
    ||||||||||||||| |||  |||||| |||||| ||| |||||||||| || ||||||| |||||||||||||||||||||||||||||| ||| |||     
T  6389893 taaataaggacatttaagtaaaaaacacacaaatatttatatactttaactacttcttaaaacttgtgtcaagagttaaaacatcaaaagaaaaagaatt 6389992  T
Q  306 gagggagta 314  Q
    |||||||||    
T  6389993 gagggagta 6390001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 195 - 314
Target Start/End: Original strand, 17904321 - 17904440
Alignment:
Q  195 gaatttaatcctaaataaggacattttagtccaaaacatacaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaacatcaaaa 294  Q
    |||||||||  ||||||||||||||| |||  |||||| |||||| ||| ||||||||||||| | ||||| |||||||||||||| |||||||||||||    
T  17904321 gaatttaatgataaataaggacatttaagtaaaaaacacacaaatgtttatatactttaattactccttaaaacttgtgtcaagagctaaaacatcaaaa 17904420  T
Q  295 gataaaaaatggagggagta 314  Q
    || ||  |||||||||||||    
T  17904421 gaaaaggaatggagggagta 17904440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 195 - 314
Target Start/End: Complemental strand, 22753187 - 22753068
Alignment:
Q  195 gaatttaatcctaaataaggacattttagtccaaaacatacaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaacatcaaaa 294  Q
    |||||||||  ||||||| |||||||||||||||||||| ||||| ||| ||| ||| ||||| |  |||||||||||||| |||  |||||||||||||    
T  22753187 gaatttaatgataaataaagacattttagtccaaaacattcaaatatttttatgcttcaattactcattaagacttgtgtccagaactaaaacatcaaaa 22753088  T
Q  295 gataaaaaatggagggagta 314  Q
     |||| ||||||||||||||    
T  22753087 tataagaaatggagggagta 22753068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 195 - 314
Target Start/End: Original strand, 26770337 - 26770456
Alignment:
Q  195 gaatttaatcctaaataaggacattttagtccaaaacatacaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaacatcaaaa 294  Q
    |||||||||  |||||||||| |||| |||  |||||| |||||| ||| ||||||||||||| | ||||| ||||||||||||| ||||||||||||||    
T  26770337 gaatttaatgataaataaggatatttaagtaaaaaacacacaaatgtttatatactttaattactccttaaaacttgtgtcaagaattaaaacatcaaaa 26770436  T
Q  295 gataaaaaatggagggagta 314  Q
    || ||  |||||||||||||    
T  26770437 gaaaatgaatggagggagta 26770456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 195 - 314
Target Start/End: Complemental strand, 46467454 - 46467335
Alignment:
Q  195 gaatttaatcctaaataaggacattttagtccaaaacatacaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaacatcaaaa 294  Q
    |||||||||  |||||||| |||||| |||  |||||| |||||| ||| ||||||||||||| | ||||| | ||||||||||||||||||||||||||    
T  46467454 gaatttaatgataaataagaacatttaagtaaaaaacacacaaatgtttatatactttaattactccttaaaatttgtgtcaagagttaaaacatcaaaa 46467355  T
Q  295 gataaaaaatggagggagta 314  Q
    || ||  |||||||||||||    
T  46467354 gaaaaggaatggagggagta 46467335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 195 - 315
Target Start/End: Complemental strand, 6387811 - 6387691
Alignment:
Q  195 gaatttaatcctaaataaggacattttagtccaaaacatacaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaacatcaaaa 294  Q
    |||||||||  ||||||||||||||| |||  |||| | |||||| ||| ||||||||||||| | ||||| |||||||||||||| |||||||||||||    
T  6387811 gaatttaatgataaataaggacatttaagtaaaaaatacacaaatgtttatatactttaattactccttaaaacttgtgtcaagagctaaaacatcaaaa 6387712  T
Q  295 gataaaaaatggagggagtac 315  Q
    || ||  |||||||| |||||    
T  6387711 gaaaaggaatggaggaagtac 6387691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 195 - 314
Target Start/End: Original strand, 9332478 - 9332598
Alignment:
Q  195 gaatttaatcctaaataaggacattttagtccaaaac-atacaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaacatcaaa 293  Q
    ||||||||| ||||||||||||||||||||  ||||  | |||||| ||| ||||||||||||| | ||||| |||||||| ||||| ||||| ||||||    
T  9332478 gaatttaatactaaataaggacattttagtaaaaaaatacacaaatatttatatactttaattactccttaaaacttgtgttaagagctaaaatatcaaa 9332577  T
Q  294 agataaaaaatggagggagta 314  Q
    ||| || ||||||||||||||    
T  9332578 agaaaagaaatggagggagta 9332598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 195 - 314
Target Start/End: Complemental strand, 29890945 - 29890826
Alignment:
Q  195 gaatttaatcctaaataaggacattttagtccaaaacatacaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaacatcaaaa 294  Q
    |||||||||  ||||||||||||||| |||  |||||| |||| | ||| ||||||||||||| | ||||| ||||||||||| || |||||||||||||    
T  29890945 gaatttaatgataaataaggacatttaagtaaaaaacacacaagtgtttatatactttaattactccttaaaacttgtgtcaaaagctaaaacatcaaaa 29890846  T
Q  295 gataaaaaatggagggagta 314  Q
    || ||  |||||||||||||    
T  29890845 gaaaaggaatggagggagta 29890826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 195 - 296
Target Start/End: Complemental strand, 29427283 - 29427182
Alignment:
Q  195 gaatttaatcctaaataaggacattttagtccaaaacatacaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaacatcaaaa 294  Q
    |||||||||  ||||||| ||||||| |||  |||||| |||||| ||| ||||||||||||| | ||||| |||||||||||||| |||||||||||||    
T  29427283 gaatttaatgataaataaagacatttaagtaaaaaacacacaaatgtttatatactttaattactccttaaaacttgtgtcaagaggtaaaacatcaaaa 29427184  T
Q  295 ga 296  Q
    ||    
T  29427183 ga 29427182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 195 - 314
Target Start/End: Original strand, 4405267 - 4405386
Alignment:
Q  195 gaatttaatcctaaataaggacattttagtccaaaacatacaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaacatcaaaa 294  Q
    |||||||||  |||||||||||||||||||  ||| || |||||| ||| |||| |||||||| | ||||| ||||||| ||| || |||||||||||||    
T  4405267 gaatttaatgataaataaggacattttagtaaaaatcacacaaatatttatatattttaattactccttaaaacttgtgccaatagctaaaacatcaaaa 4405366  T
Q  295 gataaaaaatggagggagta 314  Q
    || ||  |||||||||||||    
T  4405367 gaaaaggaatggagggagta 4405386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 195 - 314
Target Start/End: Complemental strand, 31502773 - 31502653
Alignment:
Q  195 gaatttaatcctaaataaggacattttagtccaaaa--catacaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaacatcaa 292  Q
    |||||||||  ||||||||||||||| |||  ||||  || |||||| ||| ||||||||||||| | ||||| |||||  ||||||| |||||||||||    
T  31502773 gaatttaatgataaataaggacatttaagtaaaaaaaacacacaaatgtttatatactttaattactccttaaaacttgcatcaagagctaaaacatcaa 31502674  T
Q  293 aagataaaaaatggagggagta 314  Q
    |||| ||| |||||||||||||    
T  31502673 aaga-aaagaatggagggagta 31502653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 195 - 315
Target Start/End: Complemental strand, 37179451 - 37179330
Alignment:
Q  195 gaatttaatcctaaataaggacattttagtccaaaa-catacaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaacatcaaa 293  Q
    |||||||||  |||| |||||||||| |||  |||| || |||||| | | |||||||| |||| | ||||| |||||||||||||| ||||||||||||    
T  37179451 gaatttaatgataaacaaggacatttaagtaaaaaaacacacaaatgtctatatactttcattactccttaaaacttgtgtcaagagctaaaacatcaaa 37179352  T
Q  294 agataaaaaatggagggagtac 315  Q
    ||| ||  ||||||||||||||    
T  37179351 agaaaaggaatggagggagtac 37179330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 297
Target Start/End: Original strand, 7839234 - 7839316
Alignment:
Q  215 acattttagtccaaaacatacaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaacatcaaaagat 297  Q
    |||||||| | |||||||||||||| ||| ||||||||||||| | ||||| |||||||  || || ||||| ||||||||||    
T  7839234 acattttatttcaaaacatacaaatatttatatactttaattactccttaatacttgtgataacagctaaaatatcaaaagat 7839316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 313 - 358
Target Start/End: Complemental strand, 4125526 - 4125481
Alignment:
Q  313 tacaatatattaataatttacacagtgaatattttttattctaata 358  Q
    |||||||||||||||||||| ||| |||||||||| ||||||||||    
T  4125526 tacaatatattaataatttatacaatgaatattttatattctaata 4125481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 313 - 358
Target Start/End: Complemental strand, 9691116 - 9691071
Alignment:
Q  313 tacaatatattaataatttacacagtgaatattttttattctaata 358  Q
    ||||||||| |||||||||||||| |||||||||| ||||||||||    
T  9691116 tacaatatactaataatttacacaatgaatattttatattctaata 9691071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 245 - 294
Target Start/End: Complemental strand, 19523862 - 19523813
Alignment:
Q  245 tatactttaattatttcttaagacttgtgtcaagagttaaaacatcaaaa 294  Q
    ||||||||||||| | ||||| |||||||||||||| |||||||||||||    
T  19523862 tatactttaattactccttaaaacttgtgtcaagagctaaaacatcaaaa 19523813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 208 - 296
Target Start/End: Complemental strand, 33379095 - 33379007
Alignment:
Q  208 aataaggacattttagtccaaaacatacaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaacatcaaaaga 296  Q
    |||||||||||||||||| ||| | | ||| | || |||||||||||| ||||||||| |||||||  |  | ||||||||||||||||    
T  33379095 aataaggacattttagtctaaaccttccaactattcctatactttaatgatttcttaatacttgtgcaatcacttaaaacatcaaaaga 33379007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 195 - 294
Target Start/End: Original strand, 9876421 - 9876520
Alignment:
Q  195 gaatttaatcctaaataaggacattttagtccaaaacatacaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaacatcaaaa 294  Q
    |||||||||  |||||||||||||||||||  ||| || |||||| ||| |||| |||||||| | ||||| |||| || ||| || |||||||| ||||    
T  9876421 gaatttaatgataaataaggacattttagtaaaaatcacacaaatatttatatattttaattactccttaaaacttatgccaatagctaaaacataaaaa 9876520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 313 - 359
Target Start/End: Complemental strand, 13298822 - 13298776
Alignment:
Q  313 tacaatatattaataatttacacagtgaatattttttattctaatac 359  Q
    ||||||||| |||||||||| ||| |||||||||| |||||||||||    
T  13298822 tacaatatactaataatttatacaatgaatattttatattctaatac 13298776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 277
Target Start/End: Complemental strand, 41921973 - 41921892
Alignment:
Q  195 gaatttaatcctaaataaggacattttagtccaaaacatacaaatttttctatactttaattatttcttaagacttgtgtcaa 277  Q
    |||||||||  ||||||||||||||| |||  |||| | |||||| ||| ||||||||||||| | ||||| |||||||||||    
T  41921973 gaatttaatgataaataaggacatttaagtaaaaaa-acacaaatgtttatatactttaattactccttaaaacttgtgtcaa 41921892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 194
Target Start/End: Original strand, 7839176 - 7839205
Alignment:
Q  165 taaaattattaaaggagttgtgacatttgg 194  Q
    ||||||||||||||||||||||||||||||    
T  7839176 taaaattattaaaggagttgtgacatttgg 7839205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 314
Target Start/End: Complemental strand, 12252101 - 12252069
Alignment:
Q  282 taaaacatcaaaagataaaaaatggagggagta 314  Q
    ||||||||||||||| |||||||||||||||||    
T  12252101 taaaacatcaaaagaaaaaaaatggagggagta 12252069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 314
Target Start/End: Original strand, 31858339 - 31858371
Alignment:
Q  282 taaaacatcaaaagataaaaaatggagggagta 314  Q
    ||||||||||||||| |||||||||||||||||    
T  31858339 taaaacatcaaaagaaaaaaaatggagggagta 31858371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 80; Significance: 2e-37; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 195 - 314
Target Start/End: Original strand, 21727830 - 21727949
Alignment:
Q  195 gaatttaatcctaaataaggacattttagtccaaaacatacaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaacatcaaaa 294  Q
    |||||||||| |||| ||||||||||||||||||||||||||||| ||| ||||||| ||||| | ||||||||||||| |||||| |||||||||||||    
T  21727830 gaatttaatcataaacaaggacattttagtccaaaacatacaaatatttatatacttcaattactccttaagacttgtgccaagagctaaaacatcaaaa 21727929  T
Q  295 gataaaaaatggagggagta 314  Q
    ||||||||| ||||||||||    
T  21727930 gataaaaaacggagggagta 21727949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 195 - 314
Target Start/End: Original strand, 15233913 - 15234032
Alignment:
Q  195 gaatttaatcctaaataaggacattttagtccaaaacatacaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaacatcaaaa 294  Q
    |||||||||  ||||||||||||||| |||  |||| |||||||| ||| ||||||||||||| | ||||| |||||||||||||| |||||||||||||    
T  15233913 gaatttaatgataaataaggacatttaagtaaaaaatatacaaatgtttatatactttaattactccttaaaacttgtgtcaagagctaaaacatcaaaa 15234012  T
Q  295 gataaaaaatggagggagta 314  Q
    || ||  |||||||||||||    
T  15234013 gaaaaggaatggagggagta 15234032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 195 - 296
Target Start/End: Complemental strand, 35793026 - 35792925
Alignment:
Q  195 gaatttaatcctaaataaggacattttagtccaaaacatacaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaacatcaaaa 294  Q
    |||||||||  ||||| ||||||||| |||  |||||| |||||| ||| ||||||||||||| | ||||| |||| |||||||||||||||||||||||    
T  35793026 gaatttaatgataaatcaggacatttaagtaaaaaacacacaaatgtttatatactttaattactccttaaaacttatgtcaagagttaaaacatcaaaa 35792927  T
Q  295 ga 296  Q
    ||    
T  35792926 ga 35792925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 195 - 315
Target Start/End: Original strand, 41252573 - 41252694
Alignment:
Q  195 gaatttaatcctaaataaggacattttagtccaaaa-catacaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaacatcaaa 293  Q
    |||||||||  ||||||||||||||| |||  |||| || |||||| ||| ||||||||||||| | ||||| |||||||||||||| ||||||||||||    
T  41252573 gaatttaatgataaataaggacatttaagtaaaaaaacacacaaatgtttatatactttaattactccttaaaacttgtgtcaagagctaaaacatcaaa 41252672  T
Q  294 agataaaaaatggagggagtac 315  Q
    ||| ||  ||||||| ||||||    
T  41252673 agaaaatgaatggagagagtac 41252694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 195 - 315
Target Start/End: Complemental strand, 43040968 - 43040848
Alignment:
Q  195 gaatttaatcctaaataaggacattttagtccaaaacatacaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaacatcaaaa 294  Q
    |||||||||  |||||||||||||||||||  ||| || |||||| ||| |||| |||||||| | ||||| ||||||| ||| || |||||||||||||    
T  43040968 gaatttaatgataaataaggacattttagtaaaaatcacacaaatatttatatattttaattactccttaaaacttgtgccaatagctaaaacatcaaaa 43040869  T
Q  295 gataaaaaatggagggagtac 315  Q
    || ||  ||||||||||||||    
T  43040868 gaaaaggaatggagggagtac 43040848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 195 - 314
Target Start/End: Complemental strand, 44104666 - 44104546
Alignment:
Q  195 gaatttaatcctaaataaggacattttagtccaaaa-catacaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaacatcaaa 293  Q
    |||||||||  ||||||| ||||||| |||  |||| || |||||| ||| ||||||||||||| | ||||| |||| |||||| |||||||||||||||    
T  44104666 gaatttaatgataaataaagacatttaagtaaaaaaacacacaaatgtttatatactttaattactccttaaaacttatgtcaaaagttaaaacatcaaa 44104567  T
Q  294 agataaaaaatggagggagta 314  Q
    ||| ||  |||||||||||||    
T  44104566 agaaaaggaatggagggagta 44104546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 196 - 303
Target Start/End: Original strand, 41643053 - 41643160
Alignment:
Q  196 aatttaatcctaaataaggacattttagtccaaaacatacaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaacatcaaaag 295  Q
    ||||||||  |||||||||||||||||||  |||||| |||||| ||| ||||||||||||| |  |||| |  |||| ||||| |||||||||||||||    
T  41643053 aatttaatgataaataaggacattttagtaaaaaacacacaaatatttatatactttaattactctttaaaatgtgtgccaagaattaaaacatcaaaag 41643152  T
Q  296 ataaaaaa 303  Q
    | ||||||    
T  41643153 aaaaaaaa 41643160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 313 - 373
Target Start/End: Complemental strand, 32447948 - 32447888
Alignment:
Q  313 tacaatatattaataatttacacagtgaatattttttattctaatacgcacccgtagtcga 373  Q
    ||||||||||||||||| || ||| |||||||||| ||||||||||| | |||||||||||    
T  32447948 tacaatatattaataatctatacaatgaatattttatattctaatactcccccgtagtcga 32447888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 295
Target Start/End: Complemental strand, 31903499 - 31903400
Alignment:
Q  195 gaatttaatcctaaataaggacattttagtccaaaacatacaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaacatcaaaa 294  Q
    |||||||||  |||||||||||||||| ||| |||||| ||||| | || ||||||||||||| | ||||| | | ||| ||| || |||||||||||||    
T  31903499 gaatttaatgataaataaggacattttggtcaaaaacacacaaa-tattatatactttaattactccttaaaagtcgtgccaaaagctaaaacatcaaaa 31903401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 72; Significance: 1e-32; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 195 - 314
Target Start/End: Complemental strand, 37875845 - 37875727
Alignment:
Q  195 gaatttaatcctaaataaggacattttagtccaaaacatacaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaacatcaaaa 294  Q
    |||||||||  |||||||||| ||||||||| ||||||||||||| ||||||||| ||||||||| ||||||||||||| |||||| |||||||||||||    
T  37875845 gaatttaatgataaataaggatattttagtc-aaaacatacaaatatttctatacattaattattccttaagacttgtgccaagagctaaaacatcaaaa 37875747  T
Q  295 gataaaaaatggagggagta 314  Q
    || || ||||||||||||||    
T  37875746 gaaaagaaatggagggagta 37875727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 195 - 313
Target Start/End: Complemental strand, 1236189 - 1236071
Alignment:
Q  195 gaatttaatcctaaataaggacattttagtccaaaacatacaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaacatcaaaa 294  Q
    |||||||||  ||||||||||||||| |||  |||||| |||||| ||| ||||||||||||| | ||||| |||||||||||||| |||||||||||||    
T  1236189 gaatttaatgataaataaggacatttaagtaaaaaacacacaaatgtttatatactttaattactccttaaaacttgtgtcaagagctaaaacatcaaaa 1236090  T
Q  295 gataaaaaatggagggagt 313  Q
    || ||  ||||||||||||    
T  1236089 gaaaaggaatggagggagt 1236071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 195 - 315
Target Start/End: Original strand, 4055642 - 4055762
Alignment:
Q  195 gaatttaatcctaaataaggacattttagtccaaaacatacaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaacatcaaaa 294  Q
    |||||||||  ||||||| ||||||| |||  |||||| |||||| ||| ||||||||||||| | ||||| ||||||||||||||||||||||||||||    
T  4055642 gaatttaatgataaataaagacatttaagtgaaaaacacacaaatatttatatactttaattactccttaaaacttgtgtcaagagttaaaacatcaaaa 4055741  T
Q  295 gataaaaaatggagggagtac 315  Q
    || ||| || | |||||||||    
T  4055742 gaaaaagaacgaagggagtac 4055762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 195 - 309
Target Start/End: Complemental strand, 49112393 - 49112282
Alignment:
Q  195 gaatttaatcctaaataaggacattttagtccaaaacatacaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaacatcaaaa 294  Q
    |||||||||| |||||||||| ||||||||||||||||||||||| ||| ||||||||||||| |  ||||||||| |   ||||  |||||||| ||||    
T  49112393 gaatttaatcataaataaggatattttagtccaaaacatacaaatatttttatactttaattactctttaagacttct---aagaactaaaacatgaaaa 49112297  T
Q  295 gataaaaaatggagg 309  Q
    |||||||||||||||    
T  49112296 gataaaaaatggagg 49112282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 195 - 314
Target Start/End: Original strand, 47669277 - 47669396
Alignment:
Q  195 gaatttaatcctaaataaggacattttagtccaaaacatacaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaacatcaaaa 294  Q
    |||||||||  ||||||||||||||| |||  |||| | |||||| ||| ||||||||||||| | ||||| |||||||||||||| |||||||||||||    
T  47669277 gaatttaatgataaataaggacatttaagtaaaaaatacacaaatgtttatatactttaattactccttaaaacttgtgtcaagagctaaaacatcaaaa 47669376  T
Q  295 gataaaaaatggagggagta 314  Q
    || ||  |||||||||||||    
T  47669377 gaaaaggaatggagggagta 47669396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 195 - 314
Target Start/End: Complemental strand, 10737820 - 10737701
Alignment:
Q  195 gaatttaatcctaaataaggacattttagtccaaaacatacaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaacatcaaaa 294  Q
    |||||||||  ||||||||||||||| |||  |||||| |||||| ||| ||||||||||||  | ||||| |||||| ||||||| |||||||||||||    
T  10737820 gaatttaatgataaataaggacatttaagtaaaaaacacacaaatatttatatactttaattgctccttaaaacttgtatcaagagctaaaacatcaaaa 10737721  T
Q  295 gataaaaaatggagggagta 314  Q
    || ||  |||||||||||||    
T  10737720 gaaaaggaatggagggagta 10737701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 195 - 314
Target Start/End: Original strand, 39241310 - 39241429
Alignment:
Q  195 gaatttaatcctaaataaggacattttagtccaaaacatacaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaacatcaaaa 294  Q
    |||||||||  |||||||| | ||||| ||| |||||| |||||| ||| ||||||||||||| ||||||| | || ||||||||| |||||||||||||    
T  39241310 gaatttaatgataaataagaatattttggtcaaaaacacacaaatatttatatactttaattacttcttaaaatttatgtcaagagctaaaacatcaaaa 39241409  T
Q  295 gataaaaaatggagggagta 314  Q
    || || |||||||| |||||    
T  39241410 gaaaagaaatggagagagta 39241429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 195 - 314
Target Start/End: Original strand, 46220417 - 46220536
Alignment:
Q  195 gaatttaatcctaaataaggacattttagtccaaaacatacaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaacatcaaaa 294  Q
    |||||||||  |||||||||||| || |||  |||| | |||||| ||| ||||||||||||| | ||||| |||||||||||||| |||||||||||||    
T  46220417 gaatttaatgataaataaggacaattaagtaaaaaatacacaaatgtttatatactttaattactccttaaaacttgtgtcaagagctaaaacatcaaaa 46220516  T
Q  295 gataaaaaatggagggagta 314  Q
    || ||  |||||||||||||    
T  46220517 gaaaaggaatggagggagta 46220536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 195 - 312
Target Start/End: Complemental strand, 3384714 - 3384597
Alignment:
Q  195 gaatttaatcctaaataaggacattttagtccaaaacatacaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaacatcaaaa 294  Q
    |||||||||  |||||||  |||||| |||  |||||| |||||  ||| ||||||||||||| | ||||| |||||||||||||| |||||||||||||    
T  3384714 gaatttaatgataaataaaaacatttaagtaaaaaacacacaaacgtttatatactttaattactccttaaaacttgtgtcaagagctaaaacatcaaaa 3384615  T
Q  295 gataaaaaatggagggag 312  Q
    || ||| |||||||||||    
T  3384614 gaaaaagaatggagggag 3384597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 195 - 303
Target Start/End: Original strand, 4817427 - 4817535
Alignment:
Q  195 gaatttaatcctaaataaggacattttagtccaaaacatacaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaacatcaaaa 294  Q
    |||||||||  ||||||||||||||| |||  || ||| |||||| ||| ||||||||||||| | ||||| ||||||||||||||||||||||| ||||    
T  4817427 gaatttaatgataaataaggacatttaagtaaaacacacacaaatgtttatatactttaattactccttaaaacttgtgtcaagagttaaaacataaaaa 4817526  T
Q  295 gataaaaaa 303  Q
     | ||||||    
T  4817527 aaaaaaaaa 4817535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 195 - 311
Target Start/End: Original strand, 9831661 - 9831777
Alignment:
Q  195 gaatttaatcctaaataaggacattttagtccaaaacatacaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaacatcaaaa 294  Q
    |||||||||  |||||||| |||||| |||  |||| | |||||| ||| ||||||||||||| | ||||| |||||||||||||| |||||||||||||    
T  9831661 gaatttaatgataaataagaacatttaagtaaaaaatacacaaatgtttatatactttaattactccttaaaacttgtgtcaagagctaaaacatcaaaa 9831760  T
Q  295 gataaaaaatggaggga 311  Q
    || ||  ||||||||||    
T  9831761 gaaaaggaatggaggga 9831777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 195 - 314
Target Start/End: Original strand, 48564975 - 48565094
Alignment:
Q  195 gaatttaatcctaaataaggacattttagtccaaaacatacaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaacatcaaaa 294  Q
    |||||||||  ||||||||||||||| |||  |||||| |||| | ||| ||||||||||||| | ||||| ||||||||||| ||  ||||||||||||    
T  48564975 gaatttaatgataaataaggacatttaagtaaaaaacacacaagtgtttatatactttaattactccttaaaacttgtgtcaaaagccaaaacatcaaaa 48565074  T
Q  295 gataaaaaatggagggagta 314  Q
    || ||  |||||||||||||    
T  48565075 gaaaaggaatggagggagta 48565094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 195 - 314
Target Start/End: Original strand, 8889600 - 8889720
Alignment:
Q  195 gaatttaatcctaaataaggacattttagtccaaaa-catacaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaacatcaaa 293  Q
    |||||||||  ||||||| ||||||| |||  |||| || |||||| | | ||||||||||||| ||||||| |||||||||||||| ||||||||||||    
T  8889600 gaatttaatgataaataatgacatttaagtaaaaaaacacacaaatgtatatatactttaattacttcttaaaacttgtgtcaagagctaaaacatcaaa 8889699  T
Q  294 agataaaaaatggagggagta 314  Q
    | | ||  |||||||||||||    
T  8889700 ataaaaggaatggagggagta 8889720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 313 - 373
Target Start/End: Original strand, 52053850 - 52053910
Alignment:
Q  313 tacaatatattaataatttacacagtgaatattttttattctaatacgcacccgtagtcga 373  Q
    |||||||||||||||||||| ||| |||||||||| ||||||||||||| |||||||||||    
T  52053850 tacaatatattaataatttatacaatgaatattttatattctaatacgcccccgtagtcga 52053910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 195 - 270
Target Start/End: Original strand, 26842598 - 26842673
Alignment:
Q  195 gaatttaatcctaaataaggacattttagtccaaaacatacaaatttttctatactttaattatttcttaagactt 270  Q
    |||||||||| |||||||||| ||||||||| |||||||| | || ||||||||||||||||| | ||||||||||    
T  26842598 gaatttaatcataaataaggatattttagtctaaaacatatacatatttctatactttaattactccttaagactt 26842673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 234 - 294
Target Start/End: Original strand, 18127047 - 18127107
Alignment:
Q  234 acaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaacatcaaaa 294  Q
    |||||| ||| ||||||||||||| | ||||| |||||||||||||| |||||||||||||    
T  18127047 acaaatgtttatatactttaattactccttaaaacttgtgtcaagagctaaaacatcaaaa 18127107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 323 - 371
Target Start/End: Original strand, 18459582 - 18459630
Alignment:
Q  323 taataatttacacagtgaatattttttattctaatacgcacccgtagtc 371  Q
    |||||||||| ||| |||||||||| ||||||||||| | |||||||||    
T  18459582 taataatttatacaatgaatattttatattctaatacacccccgtagtc 18459630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 60; Significance: 2e-25; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 195 - 314
Target Start/End: Complemental strand, 29452661 - 29452542
Alignment:
Q  195 gaatttaatcctaaataaggacattttagtccaaaacatacaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaacatcaaaa 294  Q
    |||||||||  ||||||| ||| |||||||| |||||| |||||| ||| ||||||||||||| | ||||| ||||||| ||||||||||||||||||||    
T  29452661 gaatttaatgataaataatgactttttagtcaaaaacacacaaatatttatatactttaattactccttaaaacttgtgccaagagttaaaacatcaaaa 29452562  T
Q  295 gataaaaaatggagggagta 314  Q
    || || |||| |||||||||    
T  29452561 gaaaataaatagagggagta 29452542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 209 - 314
Target Start/End: Original strand, 18742119 - 18742223
Alignment:
Q  209 ataaggacattttagtccaaaacatacaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaacatcaaaagataaaaaatggag 308  Q
    ||||||| ||||||||| |||||| |||||| ||| ||||| ||||||||| ||||||||||||| |||||| ||||||||||||||| || ||||||||    
T  18742119 ataaggatattttagtc-aaaacacacaaatatttttatacattaattattccttaagacttgtgccaagaggtaaaacatcaaaagaaaagaaatggag 18742217  T
Q  309 ggagta 314  Q
    ||||||    
T  18742218 ggagta 18742223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 195 - 314
Target Start/End: Original strand, 2543239 - 2543358
Alignment:
Q  195 gaatttaatcctaaataaggacattttagtccaaaacatacaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaacatcaaaa 294  Q
    |||||||||  ||||||| ||||||| |||  |||||| ||| || ||| ||||||||||||| ||||||| |||||||||||||| |||||||||||||    
T  2543239 gaatttaatgataaataaagacatttaagtaaaaaacacacagatgtttatatactttaattacttcttaaaacttgtgtcaagagctaaaacatcaaaa 2543338  T
Q  295 gataaaaaatggagggagta 314  Q
    || ||  |||||||||||||    
T  2543339 gaaaacgaatggagggagta 2543358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 195 - 295
Target Start/End: Complemental strand, 7156356 - 7156256
Alignment:
Q  195 gaatttaatcctaaataaggacattttagtccaaaacatacaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaacatcaaaa 294  Q
    |||||||||  |||||||||| ||||||||| || ||| |||||| ||| ||||||||||||||| ||||| |||||| ||||||| |||||||||||||    
T  7156356 gaatttaatgataaataaggatattttagtcaaagacacacaaatatttatatactttaattattccttaaaacttgtatcaagagctaaaacatcaaaa 7156257  T
Q  295 g 295  Q
    |    
T  7156256 g 7156256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 206 - 314
Target Start/End: Original strand, 32274603 - 32274711
Alignment:
Q  206 taaataaggacattttagtccaaaacatacaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaacatcaaaagataaaaaatg 305  Q
    |||||| |||||||| |||  |||| | |||||| ||| ||||||||||||| | ||||| |||||||||||||| ||||||||||||||| ||  ||||    
T  32274603 taaatacggacatttaagtaaaaaatacacaaatgtttatatactttaattactccttaaaacttgtgtcaagagctaaaacatcaaaagaaaatgaatg 32274702  T
Q  306 gagggagta 314  Q
    |||||||||    
T  32274703 gagggagta 32274711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 195 - 314
Target Start/End: Complemental strand, 27312235 - 27312114
Alignment:
Q  195 gaatttaatcctaaataaggacattttagtccaaaa-catacaaatttttctatactttaattatttcttaagacttgtgtc-aagagttaaaacatcaa 292  Q
    |||||||||  ||||||||||||||| |||  |||| || |||||| ||| ||||||||||||| | ||||| ||||||||| ||||| |||||||||||    
T  27312235 gaatttaatgataaataaggacatttaagtaaaaaaacacacaaatatttatatactttaattactccttaaaacttgtgtctaagagctaaaacatcaa 27312136  T
Q  293 aagataaaaaatggagggagta 314  Q
    |||| ||  |||||||||||||    
T  27312135 aagaaaaggaatggagggagta 27312114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 241 - 314
Target Start/End: Complemental strand, 786597 - 786525
Alignment:
Q  241 tttctatactttaattatttcttaagacttgtgtcaagagttaaaacatcaaaagataaaaaatggagggagta 314  Q
    ||||||||||||||||||| ||||||||||||| |||||  |||| ||| ||||||||||||||| ||||||||    
T  786597 tttctatactttaattattccttaagacttgtg-caagaactaaagcattaaaagataaaaaatgaagggagta 786525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 195 - 314
Target Start/End: Complemental strand, 31171109 - 31170990
Alignment:
Q  195 gaatttaatcctaaataaggacattttagtccaaaacatacaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaacatcaaaa 294  Q
    |||||||||  |||||||||| |||||| || |||| | |||||| ||| ||||||||||||| | ||||| | |||||  ||||  ||||| |||||||    
T  31171109 gaatttaatgataaataaggatattttaatcaaaaatacacaaatatttatatactttaattactccttaaaatttgtgctaagaactaaaatatcaaaa 31171010  T
Q  295 gataaaaaatggagggagta 314  Q
    || || ||||||||||||||    
T  31171009 gaaaagaaatggagggagta 31170990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 214 - 296
Target Start/End: Original strand, 5008308 - 5008390
Alignment:
Q  214 gacattttagtccaaaacatacaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaacatcaaaaga 296  Q
    ||||||| |||  |||||| |||||| ||| ||||||||||||| | ||||| |||||||| ||||| |||||||||||||||    
T  5008308 gacatttaagtaaaaaacacacaaatatttatatactttaattactccttaaaacttgtgttaagagctaaaacatcaaaaga 5008390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 250 - 314
Target Start/End: Complemental strand, 8504797 - 8504733
Alignment:
Q  250 tttaattatttcttaagacttgtgtcaagagttaaaacatcaaaagataaaaaatggagggagta 314  Q
    |||||||| | ||||| |||||||||||||| ||||||||||||||| ||  |||||||||||||    
T  8504797 tttaattactccttaaaacttgtgtcaagagctaaaacatcaaaagaaaaggaatggagggagta 8504733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 60; Significance: 2e-25; HSPs: 16)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 195 - 314
Target Start/End: Original strand, 29875112 - 29875231
Alignment:
Q  195 gaatttaatcctaaataaggacattttagtccaaaacatacaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaacatcaaaa 294  Q
    |||||||||  ||||||||||||||| |||  |||||| |||||| ||| ||||||||||||| | ||||| |||||||||||||| |||||||||||||    
T  29875112 gaatttaatgataaataaggacatttaagtaaaaaacacacaaatgtttatatactttaattactccttaaaacttgtgtcaagagctaaaacatcaaaa 29875211  T
Q  295 gataaaaaatggagggagta 314  Q
    || ||  |||||||||||||    
T  29875212 gaaaaggaatggagggagta 29875231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 195 - 314
Target Start/End: Complemental strand, 4695281 - 4695162
Alignment:
Q  195 gaatttaatcctaaataaggacattttagtccaaaacatacaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaacatcaaaa 294  Q
    |||||||||  ||||||||||||||| |||  |||| | |||||| ||| ||||||||||||| | ||||| |||||||||||||| || ||||||||||    
T  4695281 gaatttaataataaataaggacatttaagtaaaaaatacacaaatgtttatatactttaattactccttaaaacttgtgtcaagagctataacatcaaaa 4695182  T
Q  295 gataaaaaatggagggagta 314  Q
    || || ||||||||||||||    
T  4695181 gaaaagaaatggagggagta 4695162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 195 - 302
Target Start/End: Original strand, 4939680 - 4939787
Alignment:
Q  195 gaatttaatcctaaataaggacattttagtccaaaacatacaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaacatcaaaa 294  Q
    |||||||||  ||||||| | | ||||| ||||||||||||||||  || |||| |||||||| || ||||||||| |||||||||||||||||||||||    
T  4939680 gaatttaattataaataaaggctttttaatccaaaacatacaaatacttatatattttaattacttattaagacttatgtcaagagttaaaacatcaaaa 4939779  T
Q  295 gataaaaa 302  Q
    ||||||||    
T  4939780 gataaaaa 4939787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 195 - 315
Target Start/End: Complemental strand, 12399065 - 12398945
Alignment:
Q  195 gaatttaatcctaaataaggacattttagtccaaaacatacaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaacatcaaaa 294  Q
    |||||||||  |||||||| |||||| |||  |||| | |||||| ||| ||||||||||||| | ||||| |||||||||||||| |||||||||||||    
T  12399065 gaatttaatgataaataagaacatttaagtaaaaaatacacaaatgtttatatactttaattactccttaaaacttgtgtcaagagctaaaacatcaaaa 12398966  T
Q  295 gataaaaaatggagggagtac 315  Q
    || ||  ||||||||||||||    
T  12398965 gaaaaggaatggagggagtac 12398945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 227 - 303
Target Start/End: Original strand, 19574876 - 19574952
Alignment:
Q  227 aaaacatacaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaacatcaaaagataaaaaa 303  Q
    |||| |||||||| ||| ||||||||||||| ||||||||||||||| |||||||||||||||||||| ||||||||    
T  19574876 aaaaaatacaaatatttatatactttaattacttcttaagacttgtgccaagagttaaaacatcaaaaaataaaaaa 19574952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 195 - 314
Target Start/End: Complemental strand, 22646028 - 22645909
Alignment:
Q  195 gaatttaatcctaaataaggacattttagtccaaaacatacaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaacatcaaaa 294  Q
    |||||||||  |||||||||| ||||||||  |||||| |||||| ||| ||||||||||||| | ||||| ||||||| |||||| |||||||| ||||    
T  22646028 gaatttaatgataaataaggatattttagtaaaaaacacacaaatatttatatactttaattactccttaaaacttgtgccaagagctaaaacattaaaa 22645929  T
Q  295 gataaaaaatggagggagta 314  Q
    || || |||| |||||||||    
T  22645928 gaaaagaaattgagggagta 22645909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 195 - 314
Target Start/End: Original strand, 23090456 - 23090575
Alignment:
Q  195 gaatttaatcctaaataaggacattttagtccaaaacatacaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaacatcaaaa 294  Q
    |||||||||  |||||||| |||||| |||  |||| | |||||| ||| ||||||||||||| | ||||| |||||||||||||| |||||||||||||    
T  23090456 gaatttaatgataaataagaacatttaagtaaaaaatacacaaatgtttgtatactttaattactccttaaaacttgtgtcaagaggtaaaacatcaaaa 23090555  T
Q  295 gataaaaaatggagggagta 314  Q
    || ||  |||||||||||||    
T  23090556 gaaaaggaatggagggagta 23090575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 195 - 314
Target Start/End: Original strand, 34208696 - 34208815
Alignment:
Q  195 gaatttaatcctaaataaggacattttagtccaaaacatacaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaacatcaaaa 294  Q
    |||||||||  ||||||||||||||| |||  |||| | |||||| ||| ||||||||||||| | ||||| |||||||||||||| |||||||||||||    
T  34208696 gaatttaatgataaataaggacatttaagtaaaaaatacacaaatatttatatactttaattactccttaaaacttgtgtcaagagctaaaacatcaaaa 34208795  T
Q  295 gataaaaaatggagggagta 314  Q
     | ||  |||||||||||||    
T  34208796 aaaaaggaatggagggagta 34208815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 195 - 303
Target Start/End: Original strand, 22528163 - 22528270
Alignment:
Q  195 gaatttaatcctaaataaggacattttagtccaaaacatacaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaacatcaaaa 294  Q
    |||||||||| |||||||  | |||||| |||||||||||||||| |||||||||||||||||   ||||| ||||||||||| | ||||||||| |||     
T  22528163 gaatttaatcataaataaaaatattttaatccaaaacatacaaatatttctatactttaatta-cgcttaaaacttgtgtcaaaaattaaaacattaaat 22528261  T
Q  295 gataaaaaa 303  Q
    |||||||||    
T  22528262 gataaaaaa 22528270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 195 - 296
Target Start/End: Original strand, 4145852 - 4145953
Alignment:
Q  195 gaatttaatcctaaataaggacattttagtccaaaacatacaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaacatcaaaa 294  Q
    |||||||||  ||||||||||||||| |||  |||| | |||||| ||| ||||||||||||| | ||||| |||||||||||||  |||||||||||||    
T  4145852 gaatttaatgataaataaggacatttaagtaaaaaatacacaaatatttatatactttaattactccttaaaacttgtgtcaagaactaaaacatcaaaa 4145951  T
Q  295 ga 296  Q
    ||    
T  4145952 ga 4145953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 245 - 318
Target Start/End: Complemental strand, 42757874 - 42757801
Alignment:
Q  245 tatactttaattatttcttaagacttgtgtcaagagttaaaacatcaaaagataaaaaatggagggagtacaat 318  Q
    ||||||||||||| | ||||| |||||||||||||| ||||||||||||||| ||  |||||||||||||||||    
T  42757874 tatactttaattactccttaaaacttgtgtcaagagctaaaacatcaaaagaaaaggaatggagggagtacaat 42757801  T

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Target: chr5; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 195 - 303
Target Start/End: Original strand, 3077755 - 3077863
Alignment:
Q  195 gaatttaatcctaaataaggacattttagtccaaaacatacaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaacatcaaaa 294  Q
    |||||||||  ||||||||||||||| |||  |||| | |||||| ||| ||||||||||||| | ||||| |||||||||||||| |||||||| ||||    
T  3077755 gaatttaatgataaataaggacatttaagtaaaaaatacacaaatatttatatactttaattactccttaaaacttgtgtcaagagctaaaacataaaaa 3077854  T
Q  295 gataaaaaa 303  Q
     | ||||||    
T  3077855 aaaaaaaaa 3077863  T

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Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 195 - 303
Target Start/End: Complemental strand, 12096321 - 12096214
Alignment:
Q  195 gaatttaatcctaaataaggacattttagtccaaaacatacaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaacatcaaaa 294  Q
    |||||||||  |||| ||||||||||||||||| || ||||||||  || |||  |||||||| | |||||| ||||||||||||| | |||||||| ||    
T  12096321 gaatttaattataaagaaggacattttagtccataagatacaaatacttatatgatttaattactccttaagtcttgtgtcaagagct-aaacatcacaa 12096223  T
Q  295 gataaaaaa 303  Q
    |||||||||    
T  12096222 gataaaaaa 12096214  T

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Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 210 - 286
Target Start/End: Complemental strand, 594200 - 594124
Alignment:
Q  210 taaggacattttagtccaaaacatacaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaa 286  Q
    |||||| || ||||||||||||||| |||| ||| |||  |||||||| | |||||||||||||| |||||||||||    
T  594200 taaggatatcttagtccaaaacatataaatatttttatgttttaattactccttaagacttgtgttaagagttaaaa 594124  T

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Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 197 - 303
Target Start/End: Original strand, 32144285 - 32144392
Alignment:
Q  197 atttaatcctaaataaggacattttagtccaaaacatacaaatttttctatactttaattatttcttaagacttgtgtc-aagagttaaaacatcaaaag 295  Q
    |||||||  |||| |||||| ||||||| | ||||||| |||| ||| ||||| ||||||| | |||||||||| | || ||||| | ||||||||||||    
T  32144285 atttaattataaacaaggactttttagttcgaaacataaaaatatttatatacgttaattactccttaagacttatatctaagagcttaaacatcaaaag 32144384  T
Q  296 ataaaaaa 303  Q
    ||||||||    
T  32144385 ataaaaaa 32144392  T

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Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 313 - 358
Target Start/End: Complemental strand, 8384016 - 8383971
Alignment:
Q  313 tacaatatattaataatttacacagtgaatattttttattctaata 358  Q
    |||||||||||||||||||| ||| |||||||||| ||||||||||    
T  8384016 tacaatatattaataatttatacaatgaatattttatattctaata 8383971  T

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Target: scaffold0103 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 195 - 296
Target Start/End: Original strand, 44778 - 44877
Alignment:
Q  195 gaatttaatcctaaataaggacattttagtccaaaacatacaaatttttctatactttaattatttcttaagacttgtgtcaagagttaaaacatcaaaa 294  Q
    |||||||||  ||||||||||||||| |||  ||||||  ||||| ||| ||||||||||||| | ||||| |||||||||||||| |||||||||||||    
T  44778 gaatttaatgataaataaggacatttaagtaaaaaaca--caaatatttatatactttaattactccttaaaacttgtgtcaagagctaaaacatcaaaa 44875  T

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Target: scaffold0276 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 313 - 358
Target Start/End: Original strand, 2092 - 2137
Alignment:
Q  313 tacaatatattaataatttacacagtgaatattttttattctaata 358  Q
    |||||||||||||||||||| ||| |||||||||| ||||||||||    
T  2092 tacaatatattaataatttatacaatgaatattttatattctaata 2137  T

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