View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4970_low_38 (Length: 286)
Name: NF4970_low_38
Description: NF4970
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4970_low_38 |
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Alignment Details
Target: chr5 (Bit Score: 260; Significance: 1e-145; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 1 - 268
Target Start/End: Complemental strand, 9216217 - 9215950
Alignment:
| Q |
1 |
tacaatcatttcaattttcacaaattattaccgcgttgcatcataattaagaacagtttgaattaacttatttgatatacgcaattgtgatagctcataa |
100 |
Q |
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| T |
9216217 |
tacaatcatttcaattttcacaaattattaccgcgttgcatcataattaagaacagtttgaattaacttatttgatataagcaattgtgatagctcataa |
9216118 |
T |
|
| Q |
101 |
atggccacaattcgctgagagtggctaaccaaatatcattatttctaagctcactgccaactataaataccctccctgcctaattcttcgagagtggcta |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9216117 |
atggccacaattcgctgagagtggctaaccaaatatcattatttctaagctcactgccaactataaataccctccctgcctaattcttcgagagtggcta |
9216018 |
T |
|
| Q |
201 |
accaagtaccgaatccataccacccaccgaacggtgtgactatgttgcagcttatctctaagctatct |
268 |
Q |
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||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
9216017 |
accaagtaccgaatccataccacccaccgaaaggtgtgactatgttgcagcttatctctaagctatct |
9215950 |
T |
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