View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4971-Insertion-3 (Length: 752)

Name: NF4971-Insertion-3
Description: NF4971
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4971-Insertion-3
NF4971-Insertion-3
[»] chr1 (50 HSPs)
chr1 (261-745)||(18318510-18318994)
chr1 (415-745)||(8470315-8470646)
chr1 (360-745)||(48406338-48406726)
chr1 (415-745)||(31470253-31470584)
chr1 (415-745)||(45241105-45241436)
chr1 (415-745)||(48385920-48386251)
chr1 (415-745)||(2475864-2476195)
chr1 (201-491)||(8469999-8470313)
chr1 (440-745)||(47298291-47298576)
chr1 (440-741)||(33166297-33166578)
chr1 (453-745)||(51522348-51522620)
chr1 (440-745)||(17677053-17677339)
chr1 (207-365)||(33166048-33166219)
chr1 (457-745)||(17785373-17785641)
chr1 (176-365)||(51521963-51522166)
chr1 (441-749)||(38837427-38837712)
chr1 (174-340)||(2476506-2476683)
chr1 (174-340)||(48406068-48406245)
chr1 (107-188)||(18319019-18319100)
chr1 (177-261)||(47298822-47298907)
chr1 (176-300)||(17785072-17785210)
chr1 (174-340)||(48386316-48386493)
chr1 (174-340)||(45240822-45240999)
chr1 (8-68)||(18319099-18319157)
chr1 (415-491)||(31470134-31470210)
chr1 (178-261)||(17679570-17679654)
chr1 (174-253)||(48406037-48406117)
chr1 (177-261)||(31469805-31469890)
chr1 (174-250)||(48406006-48406083)
chr1 (174-253)||(51521899-51521979)
chr1 (190-253)||(17785056-17785119)
chr1 (323-365)||(51522172-51522214)
chr1 (174-250)||(2476637-2476714)
chr1 (180-234)||(51521936-51521991)
chr1 (324-365)||(38837791-38837832)
chr1 (201-250)||(48406003-48406052)
chr1 (415-476)||(2476214-2476277)
chr1 (415-476)||(2476296-2476359)
chr1 (415-476)||(2476378-2476441)
chr1 (421-491)||(31470179-31470249)
chr1 (324-358)||(38837846-38837880)
chr1 (324-358)||(47298709-47298743)
chr1 (201-250)||(2476668-2476717)
chr1 (174-222)||(8470002-8470051)
chr1 (324-365)||(17785237-17785278)
chr1 (201-250)||(45240819-45240868)
chr1 (324-365)||(47298654-47298695)
chr1 (201-250)||(48386447-48386496)
chr1 (415-480)||(48406228-48406293)
chr1 (177-253)||(51521871-51521948)
[»] chr6 (25 HSPs)
chr6 (180-745)||(24113873-24114437)
chr6 (415-745)||(17959035-17959366)
chr6 (415-745)||(34840476-34840807)
chr6 (477-745)||(8221239-8221508)
chr6 (415-745)||(633735-634066)
chr6 (415-745)||(6378167-6378498)
chr6 (174-434)||(13264400-13264673)
chr6 (199-499)||(8220612-8220924)
chr6 (415-632)||(18641272-18641490)
chr6 (177-365)||(24917746-24917952)
chr6 (360-491)||(8221067-8221200)
chr6 (418-745)||(24917344-24917651)
chr6 (201-340)||(34840262-34840411)
chr6 (174-340)||(17959472-17959649)
chr6 (304-365)||(18641121-18641182)
chr6 (661-745)||(18641498-18641582)
chr6 (177-261)||(633194-633279)
chr6 (177-261)||(6378807-6378892)
chr6 (174-234)||(8220617-8220678)
chr6 (174-253)||(13264625-13264702)
chr6 (418-491)||(8220882-8220955)
chr6 (415-497)||(34840435-34840519)
chr6 (418-483)||(8220921-8220986)
chr6 (201-250)||(17959603-17959652)
chr6 (216-261)||(18641049-18641094)
[»] chr5 (25 HSPs)
chr5 (360-745)||(29617266-29617654)
chr5 (360-745)||(30646602-30646989)
chr5 (415-745)||(32974095-32974426)
chr5 (415-749)||(40890792-40891127)
chr5 (415-745)||(4579074-4579405)
chr5 (415-745)||(27944621-27944952)
chr5 (174-365)||(9273433-9273636)
chr5 (360-491)||(27406302-27406435)
chr5 (174-340)||(27944176-27944353)
chr5 (174-340)||(32974778-32974955)
chr5 (192-340)||(29617785-29617943)
chr5 (654-745)||(34710303-34710394)
chr5 (201-340)||(40890578-40890727)
chr5 (415-491)||(27944459-27944535)
chr5 (176-261)||(4578703-4578789)
chr5 (415-488)||(4578953-4579026)
chr5 (177-249)||(4578673-4578746)
chr5 (198-250)||(9273590-9273642)
chr5 (207-253)||(4578673-4578719)
chr5 (415-497)||(32974383-32974467)
chr5 (323-357)||(9273393-9273427)
chr5 (418-479)||(27406275-27406336)
chr5 (201-250)||(27944173-27944222)
chr5 (415-480)||(29617699-29617764)
chr5 (201-250)||(32974909-32974958)
[»] chr8 (16 HSPs)
chr8 (440-745)||(27359165-27359471)
chr8 (440-745)||(27368522-27368828)
chr8 (360-745)||(15055557-15055946)
chr8 (415-745)||(1956024-1956355)
chr8 (440-745)||(30530369-30530654)
chr8 (440-632)||(17743684-17743877)
chr8 (207-365)||(30530780-30530939)
chr8 (201-340)||(1956462-1956611)
chr8 (174-261)||(15055317-15055405)
chr8 (177-261)||(17743365-17743450)
chr8 (653-745)||(17743877-17743969)
chr8 (324-358)||(30530739-30530773)
chr8 (324-355)||(17743592-17743623)
chr8 (177-222)||(30530893-30530939)
chr8 (201-250)||(15055314-15055363)
chr8 (324-365)||(17743544-17743585)
[»] chr4 (40 HSPs)
chr4 (361-745)||(16172592-16172979)
chr4 (415-745)||(8993753-8994084)
chr4 (415-745)||(13112531-13112862)
chr4 (415-745)||(46915214-46915545)
chr4 (415-745)||(3615989-3616320)
chr4 (415-745)||(3531000-3531331)
chr4 (416-745)||(2213020-2213349)
chr4 (418-745)||(33606073-33606380)
chr4 (210-365)||(34435682-34435850)
chr4 (519-745)||(28446370-28446576)
chr4 (478-745)||(36657588-36657834)
chr4 (174-340)||(16173228-16173405)
chr4 (648-745)||(34435278-34435375)
chr4 (261-365)||(33605870-33605978)
chr4 (455-595)||(34435401-34435541)
chr4 (174-340)||(3616631-3616808)
chr4 (174-340)||(8993470-8993647)
chr4 (174-340)||(13112248-13112425)
chr4 (174-340)||(3531517-3531694)
chr4 (541-630)||(53182265-53182355)
chr4 (177-261)||(53182639-53182724)
chr4 (415-491)||(3531335-3531411)
chr4 (176-261)||(46915789-46915875)
chr4 (177-258)||(2213596-2213678)
chr4 (174-250)||(3616762-3616839)
chr4 (177-249)||(46915832-46915905)
chr4 (653-745)||(53182171-53182263)
chr4 (207-253)||(46915859-46915905)
chr4 (201-250)||(3531648-3531697)
chr4 (415-476)||(3616339-3616402)
chr4 (415-476)||(3616421-3616484)
chr4 (415-476)||(3616503-3616566)
chr4 (415-491)||(16173054-16173130)
chr4 (201-249)||(16173360-16173408)
chr4 (324-363)||(53182521-53182560)
chr4 (453-511)||(53182370-53182428)
chr4 (201-250)||(3616793-3616842)
chr4 (201-250)||(8993467-8993516)
chr4 (201-250)||(13112245-13112294)
chr4 (324-365)||(34435634-34435675)
[»] chr7 (19 HSPs)
chr7 (360-745)||(22658857-22659245)
chr7 (415-745)||(36520497-36520828)
chr7 (415-745)||(22193281-22193612)
chr7 (177-365)||(32128428-32128634)
chr7 (420-632)||(26814155-26814368)
chr7 (176-365)||(26813851-26814058)
chr7 (174-316)||(22658389-22658545)
chr7 (174-340)||(36520190-36520367)
chr7 (440-632)||(32128079-32128272)
chr7 (174-253)||(22658358-22658438)
chr7 (177-253)||(26813821-26813898)
chr7 (177-261)||(22192887-22192972)
chr7 (685-745)||(26814400-26814460)
chr7 (685-745)||(32127987-32128047)
chr7 (201-250)||(22658355-22658404)
chr7 (415-491)||(22658630-22658706)
chr7 (457-497)||(22658633-22658673)
chr7 (450-491)||(22658545-22658586)
chr7 (201-250)||(36520187-36520236)
[»] chr3 (56 HSPs)
chr3 (360-750)||(42562920-42563313)
chr3 (415-745)||(17468481-17468812)
chr3 (415-745)||(25788445-25788776)
chr3 (415-745)||(30416201-30416532)
chr3 (415-745)||(42599100-42599431)
chr3 (415-745)||(6046073-6046404)
chr3 (421-745)||(47146344-47146669)
chr3 (415-745)||(10425397-10425728)
chr3 (415-745)||(25830402-25830733)
chr3 (407-740)||(21227156-21227490)
chr3 (455-745)||(50019124-50019394)
chr3 (455-745)||(33750690-33750960)
chr3 (407-739)||(21230273-21230607)
chr3 (440-632)||(26157936-26158129)
chr3 (653-745)||(33188812-33188904)
chr3 (174-340)||(30416638-30416815)
chr3 (174-340)||(42562585-42562762)
chr3 (180-363)||(50018733-50018933)
chr3 (177-261)||(51428769-51428854)
chr3 (174-340)||(6046873-6047050)
chr3 (174-340)||(10425875-10426052)
chr3 (174-340)||(17468198-17468375)
chr3 (648-745)||(33935473-33935570)
chr3 (415-491)||(42599474-42599550)
chr3 (415-491)||(42599593-42599669)
chr3 (176-365)||(33750389-33750595)
chr3 (176-261)||(42599792-42599878)
chr3 (177-257)||(33189204-33189285)
chr3 (415-491)||(6046449-6046525)
chr3 (415-491)||(6046611-6046687)
chr3 (415-491)||(6046732-6046808)
chr3 (174-250)||(6047004-6047081)
chr3 (177-261)||(25789085-25789170)
chr3 (177-261)||(25831042-25831127)
chr3 (177-253)||(33750359-33750436)
chr3 (177-261)||(47145845-47145930)
chr3 (416-497)||(47146300-47146381)
chr3 (177-253)||(50018669-50018745)
chr3 (648-745)||(51429170-51429267)
chr3 (570-632)||(33935415-33935478)
chr3 (177-249)||(42599835-42599908)
chr3 (324-365)||(50018990-50019031)
chr3 (415-491)||(42562745-42562821)
chr3 (191-250)||(10426006-10426065)
chr3 (207-253)||(42599862-42599908)
chr3 (201-250)||(6047035-6047084)
chr3 (324-365)||(33189080-33189121)
chr3 (201-250)||(42562582-42562631)
chr3 (693-744)||(30689566-30689617)
chr3 (324-355)||(33750602-33750633)
chr3 (324-355)||(50019038-50019069)
chr3 (324-363)||(51428933-51428972)
chr3 (421-491)||(42599435-42599505)
chr3 (201-250)||(17468195-17468244)
chr3 (201-250)||(30416769-30416818)
chr3 (519-548)||(53722755-53722784)
[»] chr2 (29 HSPs)
chr2 (415-745)||(7586274-7586605)
chr2 (415-745)||(30820354-30820685)
chr2 (416-745)||(8854065-8854395)
chr2 (415-745)||(9073657-9073988)
chr2 (415-745)||(12856944-12857275)
chr2 (174-365)||(31186384-31186589)
chr2 (177-365)||(16441950-16442151)
chr2 (440-599)||(40879722-40879879)
chr2 (455-632)||(31205787-31205966)
chr2 (177-363)||(31206102-31206301)
chr2 (261-365)||(40879957-40880061)
chr2 (453-632)||(31186071-31186250)
chr2 (648-745)||(4278350-4278447)
chr2 (174-340)||(7586711-7586888)
chr2 (174-261)||(22349880-22349968)
chr2 (174-340)||(30820791-30820968)
chr2 (174-250)||(22349922-22349999)
chr2 (534-632)||(4278258-4278355)
chr2 (653-745)||(31185979-31186071)
chr2 (653-745)||(31205693-31205787)
chr2 (177-261)||(8853735-8853820)
chr2 (177-261)||(12856697-12856782)
chr2 (201-250)||(22349953-22350002)
chr2 (177-249)||(31186544-31186617)
chr2 (324-355)||(40879919-40879950)
chr2 (207-253)||(40880082-40880128)
chr2 (201-250)||(7586842-7586891)
chr2 (201-250)||(30820922-30820971)
chr2 (177-229)||(40880075-40880128)
[»] scaffold1240 (5 HSPs)
scaffold1240 (440-745)||(453-738)
scaffold1240 (176-357)||(872-1070)
scaffold1240 (176-253)||(1054-1132)
scaffold1240 (176-253)||(1023-1101)
scaffold1240 (324-355)||(778-809)
[»] scaffold0007 (1 HSPs)
scaffold0007 (419-739)||(167084-167405)
[»] scaffold0658 (4 HSPs)
scaffold0658 (606-745)||(6861-7000)
scaffold0658 (222-365)||(7226-7365)
scaffold0658 (450-549)||(7019-7117)
scaffold0658 (321-355)||(7188-7222)
[»] scaffold0004 (3 HSPs)
scaffold0004 (177-365)||(104523-104729)
scaffold0004 (453-632)||(104898-105078)
scaffold0004 (685-745)||(105110-105170)
[»] scaffold1384 (1 HSPs)
scaffold1384 (83-159)||(1200-1275)


Alignment Details
Target: chr1 (Bit Score: 361; Significance: 0; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 361; E-Value: 0
Query Start/End: Original strand, 261 - 745
Target Start/End: Complemental strand, 18318994 - 18318510
Alignment:
Q  261 tgtgtggtggacactgacgcattcaaaataagttattgtattgtattaaagcaaacggttgag-ataattattaaagcaaatagtatgtgaaataatggt 359  Q
    ||||||||||||||||||| |||| |||||||||||| ||||||||||||||||||  ||||| ||||||||||||| ||||| ||||||||||||||||    
T  18318994 tgtgtggtggacactgacggattcgaaataagttattatattgtattaaagcaaaca-ttgaggataattattaaaggaaataatatgtgaaataatggt 18318896  T
Q  360 cacacattccaacgaatggaggaagaccttcaaatagtatgtgaaataagtcacggataattattaaagcaaacactacagacttgacaccattgacaat 459  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||    
T  18318895 cacacattccaacgaattgaggaagaccttcaaatagtatgtgaaataagtcacggataattattaaagcaaacactacagacttaacaccactgacaat 18318796  T
Q  460 tattaaagcaaacagtggggactaaacaacacagacaattttgatcgaatacnnnnnnntatttgattgaaattaattttcaaacagctcaagctccaac 559  Q
    |||||||||||||||||||||||| ||||||| ||||||||| | |||||||       ||||||||||||||||||||||||| |||||| ||||||||    
T  18318795 tattaaagcaaacagtggggactagacaacactgacaattttaaccgaatacaaacaaatatttgattgaaattaattttcaaatagctcacgctccaac 18318696  T
Q  560 ttttccaacagctctttcttccggtcatcgagatgctcttcagaactaactttagatagagtttcattttcttagcttcagtcttttctttcatcaattt 659  Q
    |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| ||| ||| |||||||||||||||||    
T  18318695 ttttccaatagctctttcttccggtcatcgagatgctcttcggaactaactttagatacagtttcattttcttatctttagtattttctttcatcaattt 18318596  T
Q  660 gtttttctcttgttgcaccaaggttaactctttcaattgttcaagctcttgctccttgaattgtttgaattcaacccactcctttt 745  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18318595 gtttttctcctgttgcaccaaggttaactctttcaattgttcaagctcttgctccttgaattgtttgaattcaacccactcctttt 18318510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 183; E-Value: 1e-98
Query Start/End: Original strand, 415 - 745
Target Start/End: Original strand, 8470315 - 8470646
Alignment:
Q  415 gataattattaaagcaaacactacagacttgacaccattgacaattattaaagcaaacagtggggactaaacaacacagacaattttgatcgaatacnnn 514  Q
    ||||||||||||||||||||||   |||| |||| || ||| ||||||||||||||||| ||||||||| ||||||| || ||||||||  ||||||       
T  8470315 gataattattaaagcaaacactggggactagacaacactgataattattaaagcaaacattggggactagacaacactgataattttgactgaatacaaa 8470414  T
Q  515 nnnntatttgattgaaattaattttcaaacagctcaagctccaacttttccaacagctctttcttccggtcatcgagatgctcttcagaact-aacttta 613  Q
        ||||| ||| ||||||| ||| |||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| ||||| |||||||    
T  8470415 caaatatttaattaaaattaacttttaaacagctcaagctccaactttcccaacagctcttacttccggtcatcgagatgctcttcggaacttaacttta 8470514  T
Q  614 gatagagtttcattttcttagcttcagtcttttctttcatcaatttgtttttctcttgttgcaccaaggttaactctttcaattgttcaagctcttgctc 713  Q
    |||| | |||||||||||||||||||||||||||||||||||| |||||||||| ||||| ||||||||||||||||||||||||||||  |||||||||    
T  8470515 gatacattttcattttcttagcttcagtcttttctttcatcaacttgtttttctgttgttccaccaaggttaactctttcaattgttcagtctcttgctc 8470614  T
Q  714 cttgaattgtttgaattcaacccactcctttt 745  Q
    ||| |||| |||||||| ||||||||||||||    
T  8470615 ctttaattctttgaattgaacccactcctttt 8470646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 360 - 745
Target Start/End: Original strand, 48406338 - 48406726
Alignment:
Q  360 cacacattccaacgaatggaggaagaccttcaaatagtatgtgaaataa--gtcacggataattattaaagcaaacactacagacttgacaccattgaca 457  Q
    ||||||||||||| |||||||||||||||||||||||| | ||||||||  |||||||||||||  |||||||  || ||  |||| || |  | |||||    
T  48406338 cacacattccaacaaatggaggaagaccttcaaatagtgtttgaaataaaagtcacggataattggtaaagcacgcattagggactagataatactgaca 48406437  T
Q  458 attattaaagcaaacagtggggactaaacaacacagacaattttgatcgaatacnnnnnnntatttgattgaaattaattttcaaacagctcaagctcca 557  Q
    | |||||||||||||| | ||||||| ||||||| || ||||||||  |||||        ||||||||| |||||||||||||||||||||| ||||||    
T  48406438 aatattaaagcaaacactcgggactagacaacactgataattttgactgaatataaacaaatatttgattaaaattaattttcaaacagctcacgctcca 48406537  T
Q  558 acttttccaacagctctttcttccggtcatcgagatgctcttcagaact-aactttagatagagtttcattttcttagcttcagtcttttctttcatcaa 656  Q
    ||||  |||||| ||||||||| |||||||||||||||||||| ||||| ||||||||||| | ||||||||||||||||||||||||||||| || |||    
T  48406538 acttccccaacaactctttctttcggtcatcgagatgctcttcggaacttaactttagatacattttcattttcttagcttcagtcttttcttgcagcaa 48406637  T
Q  657 tttgtttttctcttgttgcaccaaggttaactctttcaattgttcaagctcttgctccttgaattgtttgaattcaacccactcctttt 745  Q
     |||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||| |||| |||||||| ||||||||||||||    
T  48406638 cttgtttttctgttgtttcaccaaggttaactctttcaattgttcaatctcttgctcctttaattctttgaattgaacccactcctttt 48406726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 155; E-Value: 7e-82
Query Start/End: Original strand, 415 - 745
Target Start/End: Original strand, 31470253 - 31470584
Alignment:
Q  415 gataattattaaagcaaacactacagacttgacaccattgacaattattaaagcaaacagtggggactaaacaacacagacaattttgatcgaatacnnn 514  Q
    |||||||||||||||||||||||| |||| |||| || |||||| |||||||||||||||| ||||||| ||||||| || ||| ||||  ||||||       
T  31470253 gataattattaaagcaaacactacggactagacaacactgacaaatattaaagcaaacagtcgggactagacaacactgataatgttgactgaatacaaa 31470352  T
Q  515 nnnntatttgattgaaattaattttcaaacagctcaagctccaacttttccaacagctctttcttccggtcatcgagatgctcttcagaac-taacttta 613  Q
        ||||||||| |||||||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||||||||||    | ||||||||    
T  31470353 caaatatttgattaaaattaattttcaaacagctcacgctccaacttctccaacagctccttcttccggtcatcgagatgctcttcgtcccttaacttta 31470452  T
Q  614 gatagagtttcattttcttagcttcagtcttttctttcatcaatttgtttttctcttgttgcaccaaggttaactctttcaattgttcaagctcttgctc 713  Q
    |||| | ||||||||| ||||||| ||||||||||| || ||| |||||||||| ||||| ||||||  ||||||||||||||||||||| |||||||||    
T  31470453 gatacattttcatttttttagcttgagtcttttcttgcagcaacttgtttttctgttgtttcaccaaatttaactctttcaattgttcaatctcttgctc 31470552  T
Q  714 cttgaattgtttgaattcaacccactcctttt 745  Q
     || |||| |||||||| |||||| |||||||    
T  31470553 ttttaattctttgaattgaacccattcctttt 31470584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 155; E-Value: 7e-82
Query Start/End: Original strand, 415 - 745
Target Start/End: Original strand, 45241105 - 45241436
Alignment:
Q  415 gataattattaaagcaaacactacagacttgacaccattgacaattattaaagcaaacagtggggactaaacaacacagacaattttgatcgaatacnnn 514  Q
    |||||||||||||||||||||||| |||| |||| || |||||| |||||||||||||||| ||||||| ||||||| || ||| ||||  ||||||       
T  45241105 gataattattaaagcaaacactacggactagacaacactgacaaatattaaagcaaacagtcgggactagacaacactgataatgttgactgaatacaaa 45241204  T
Q  515 nnnntatttgattgaaattaattttcaaacagctcaagctccaacttttccaacagctctttcttccggtcatcgagatgctcttcagaac-taacttta 613  Q
        ||||||||| |||||||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||||||||||    | ||||||||    
T  45241205 caaatatttgattaaaattaattttcaaacagctcacgctccaacttctccaacagctccttcttccggtcatcgagatgctcttcgtcccttaacttta 45241304  T
Q  614 gatagagtttcattttcttagcttcagtcttttctttcatcaatttgtttttctcttgttgcaccaaggttaactctttcaattgttcaagctcttgctc 713  Q
    |||| | ||||||||| ||||||| ||||||||||| || ||| |||||||||| ||||| ||||||  ||||||||||||||||||||| |||||||||    
T  45241305 gatacattttcatttttttagcttgagtcttttcttgcagcaacttgtttttctgttgtttcaccaaatttaactctttcaattgttcaatctcttgctc 45241404  T
Q  714 cttgaattgtttgaattcaacccactcctttt 745  Q
     || |||| |||||||| |||||| |||||||    
T  45241405 ttttaattctttgaattgaacccattcctttt 45241436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 155; E-Value: 7e-82
Query Start/End: Original strand, 415 - 745
Target Start/End: Complemental strand, 48386251 - 48385920
Alignment:
Q  415 gataattattaaagcaaacactacagacttgacaccattgacaattattaaagcaaacagtggggactaaacaacacagacaattttgatcgaatacnnn 514  Q
    |||||||||||||||||||||||| |||| |||| || |||||| |||||||||||||||| ||||||| ||||||| || ||| ||||  ||||||       
T  48386251 gataattattaaagcaaacactacggactagacaacactgacaaatattaaagcaaacagtcgggactagacaacactgataatgttgactgaatacaaa 48386152  T
Q  515 nnnntatttgattgaaattaattttcaaacagctcaagctccaacttttccaacagctctttcttccggtcatcgagatgctcttcagaac-taacttta 613  Q
        ||||||||| |||||||||||||||||||||| ||||||||||  |||||||||| ||||||||||||||||||||||||||    | ||||||||    
T  48386151 caaatatttgattaaaattaattttcaaacagctcacgctccaacttccccaacagctcattcttccggtcatcgagatgctcttcgtcccttaacttta 48386052  T
Q  614 gatagagtttcattttcttagcttcagtcttttctttcatcaatttgtttttctcttgttgcaccaaggttaactctttcaattgttcaagctcttgctc 713  Q
    |||| | ||||||||| ||||||| ||||||||||| || ||| |||||||||| ||||| |||||| |||||||||||||||||||||| |||||||||    
T  48386051 gatacattttcatttttttagcttgagtcttttcttgcagcaacttgtttttctgttgtttcaccaaagttaactctttcaattgttcaatctcttgctc 48385952  T
Q  714 cttgaattgtttgaattcaacccactcctttt 745  Q
     || |||| |||||||| |||||| |||||||    
T  48385951 ttttaattctttgaattgaacccattcctttt 48385920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 415 - 745
Target Start/End: Complemental strand, 2476195 - 2475864
Alignment:
Q  415 gataattattaaagcaaacactacagacttgacaccattgacaattattaaagcaaacagtggggactaaacaacacagacaattttgatcgaatacnnn 514  Q
    |||||||||||||||||||||||| |||| |||| || |||||| |||||||||||||||| ||||||| ||||||| || ||| ||||  ||||||       
T  2476195 gataattattaaagcaaacactacggactagacaacactgacaaatattaaagcaaacagttgggactagacaacactgataatgttgactgaatacaaa 2476096  T
Q  515 nnnntatttgattgaaattaattttcaaacagctcaagctccaacttttccaacagctctttcttccggtcatcgagatgctcttcagaac-taacttta 613  Q
        ||||||||| ||||||||||||||||| |||| ||||||||||  |||||||||| ||||||||||||||||||||||||||    | ||||||||    
T  2476095 caaatatttgattaaaattaattttcaaacaactcacgctccaacttccccaacagctcattcttccggtcatcgagatgctcttcgtcccttaacttta 2475996  T
Q  614 gatagagtttcattttcttagcttcagtcttttctttcatcaatttgtttttctcttgttgcaccaaggttaactctttcaattgttcaagctcttgctc 713  Q
    |||| | ||||||||| ||||||| ||||||||||| || ||| |||||||||| ||||| |||||| |||||||||||||||||||||| |||||||||    
T  2475995 gatacattttcatttttttagcttgagtcttttcttgcagcaacttgtttttctgttgtttcaccaaagttaactctttcaattgttcaatctcttgctc 2475896  T
Q  714 cttgaattgtttgaattcaacccactcctttt 745  Q
     || |||| |||||||| |||||| |||||||    
T  2475895 ttttaattctttgaattgaacccattcctttt 2475864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 201 - 491
Target Start/End: Original strand, 8469999 - 8470313
Alignment:
Q  201 gtgatattggaagtggatatgaatgagatttgtgatattgaaagtagatatgagtccctat-------------gtgtggtggacactgacgcattcaaa 287  Q
    |||||||||||||| ||||||||||||||||||||||||  ||||||||||||||||||||             |||||||||||||||||| |||| ||    
T  8469999 gtgatattggaagtagatatgaatgagatttgtgatattagaagtagatatgagtccctatatatcagtacattgtgtggtggacactgacggattcgaa 8470098  T
Q  288 ataagttattgtattgtattaaagcaaacggttgagataattattaaagcaa---atagta------tgtgaaataatggtcacacattccaacgaatgg 378  Q
    ||||||||||||||||||||||||||||| || | ||||||||||||||  |   ||||||      | | ||| | ||| |||||  |||||| |||||    
T  8470099 ataagttattgtattgtattaaagcaaacagtggggataattattaaagtcacggatagtaccattttattaaacagtgggcacacgctccaacaaatgg 8470198  T
Q  379 aggaagaccttcaaatagtatgtgaaataa--gtcacggataattattaaagcaaacactacagacttgacaccattgacaattattaaagcaaacagtg 476  Q
    ||||||||||||||||||||||||||||||  ||||| |||||||  ||||||||||| ||  |||| |||| || ||||||||||||||||||||| ||    
T  8470199 aggaagaccttcaaatagtatgtgaaataaaagtcacagataattggtaaagcaaacattagggactagacaacactgacaattattaaagcaaacactg 8470298  T
Q  477 gggactaaacaacac 491  Q
    |||||||||||||||    
T  8470299 gggactaaacaacac 8470313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 440 - 745
Target Start/End: Complemental strand, 47298576 - 47298291
Alignment:
Q  440 gacttgacaccattgacaattattaaagcaaacagtggggactaaacaacacagacaattttgatcgaatacnnnnnnntatttgattgaaattaatttt 539  Q
    |||| |||| || ||||||||||||||||||||| ||||| ||||||||||| ||||||||||| |||||||       |||| ||||| |||||||||     
T  47298576 gactagacaacactgacaattattaaagcaaacattggggtctaaacaacactgacaattttgaccgaatacaaacaaatattggattgcaattaatttc 47298477  T
Q  540 caaacagctcaagctccaacttttccaacagctctttcttccggtcatcgagatgctcttcagaac-taactttagatagagtttcattttcttagcttc 638  Q
     |||||||||| ||||||||||||||||||||||||| |||||||||||||||| |||||| |||| |||||||| ||| |||||||||||||           
T  47298476 aaaacagctcacgctccaacttttccaacagctcttttttccggtcatcgagatactcttcggaacttaactttacatacagtttcattttct------- 47298384  T
Q  639 agtcttttctttcatcaatttgtttttctcttgttgcaccaaggttaactctttcaattgttcaagctcttgctccttgaattgtttgaattcaacccac 738  Q
                  ||||| |||||||||| |||||||||||||| ||||||||||||||||||| ||||||| |||||| || ||||||||||| ||||    
T  47298383 --------------tcaatctgtttttctcctgttgcaccaaggtgaactctttcaattgttcaatctcttgcaccttgatttctttgaattcaatccac 47298298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 440 - 741
Target Start/End: Original strand, 33166297 - 33166578
Alignment:
Q  440 gacttgacaccattgacaattattaaagcaaacagtggggactaaacaacacagacaattttgatcgaatacnnnnnnntatttgattgaaattaatttt 539  Q
    |||| |||| || ||||||||||||||| ||| | ||| ||||| ||||||| ||||||||||| |||||||       ||||||||||||||||||||     
T  33166297 gactagacaacactgacaattattaaagtaaaaattggagactagacaacactgacaattttgaccgaatacaaacaaatatttgattgaaattaatttc 33166396  T
Q  540 caaacagctcaagctccaacttttccaacagctctttcttccggtcatcgagatgctcttcagaac-taactttagatagagtttcattttcttagcttc 638  Q
     |||||||||| ||||||||||||||||||||||||| ||||||||||| |||| |||||| |||| |||||||| ||| |||||||||||||           
T  33166397 aaaacagctcacgctccaacttttccaacagctcttttttccggtcatcaagattctcttcggaacttaactttacatacagtttcattttct------- 33166489  T
Q  639 agtcttttctttcatcaatttgtttttctcttgttgcaccaaggttaactctttcaattgttcaagctcttgctccttgaattgtttgaattcaacccac 738  Q
                  ||||| |||||||||| |||||||||||||| ||||||||||||||||||| ||||||| |||||| || ||||||||||||||||    
T  33166490 --------------tcaatctgtttttctcctgttgcaccaaggtgaactctttcaattgttcaatctcttgcaccttgatttctttgaattcaacccac 33166575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 453 - 745
Target Start/End: Original strand, 51522348 - 51522620
Alignment:
Q  453 tgacaattattaaagcaaacagtggggactaaacaacacagacaattttgatcgaatacnnnnnnntatttgattgaaattaattttcaaacagctcaag 552  Q
    ||||||||||||||||||||| ||  ||||| ||||||| ||||||||||| |||||||       ||||||| ||||||||||||  |||||||||| |    
T  51522348 tgacaattattaaagcaaacactgtagactagacaacactgacaattttgaccgaatacaaacaaatatttgagtgaaattaatttcaaaacagctcacg 51522447  T
Q  553 ctccaacttttccaacagctctttcttccggtcatcgagatgctcttcagaac-taactttagatagagtttcattttcttagcttcagtcttttctttc 651  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| |||| |||||||| ||| | | ||                 |||||||||     
T  51522448 ctccaacttttccaacagcactttcttccggtcatcgagatgctcttcggaacttaactttacatacaatgtc-----------------cttttcttt- 51522529  T
Q  652 atcaatttgtttttctcttgttgcaccaaggttaactctttcaattgttcaagctcttgctccttgaattgtttgaattcaacccactcctttt 745  Q
       |||||||||||||| || ||||||||||| ||||||||||||||||||| ||||||   ||||| ||||||||||||||||||||||||||    
T  51522530 ---aatttgtttttctcctgatgcaccaaggtgaactctttcaattgttcaatctcttggagcttgatttgtttgaattcaacccactcctttt 51522620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 440 - 745
Target Start/End: Complemental strand, 17677339 - 17677053
Alignment:
Q  440 gacttgacaccattgacaattattaaagcaaacagtggggactaaacaacacagacaattttgatcgaatacnnnnnnntatttgattgaaattaatttt 539  Q
    |||| |||| ||||||||||||||||| |||||| |  || ||| ||||||| ||||||||||| |||||||       |||| ||||| |||||||||     
T  17677339 gactagacaacattgacaattattaaaacaaacactaaggtctagacaacactgacaattttgaccgaatacaaacaaatattggattgcaattaatttc 17677240  T
Q  540 caaacagctcaagctccaacttttccaacagctctttctt-ccggtcatcgagatgctcttcagaac-taactttagatagagtttcattttcttagctt 637  Q
     ||| |||||| ||||||||||||||||||||||||| || ||||||||||||||||||||| |||| |||||||| ||| |||||||||||||          
T  17677239 aaaatagctcacgctccaacttttccaacagctcttttttcccggtcatcgagatgctcttcggaacttaactttacatacagtttcattttct------ 17677146  T
Q  638 cagtcttttctttcatcaatttgtttttctcttgttgcaccaaggttaactctttcaattgttcaagctcttgctccttgaattgtttgaattcaaccca 737  Q
                   ||| | |||||||||| |||||||||||||| ||||||||||||||||||| ||||||| |||||| || |||||||||||||||    
T  17677145 ---------------tcattctgtttttctcctgttgcaccaaggtgaactctttcaattgttcaatctcttgcaccttgatttctttgaattcaaccca 17677061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 207 - 365
Target Start/End: Original strand, 33166048 - 33166219
Alignment:
Q  207 ttggaagtggatatgaatgagatttgtgatattgaaagtagatatgagtccctat-------------gtgtggtggacactgacgcattcaaaataagt 293  Q
    |||||||| |||||||||||||||||||| |||| ||||||||||||||||||||             |||||||||||||||||| |||| |||||| |    
T  33166048 ttggaagtagatatgaatgagatttgtgaaattggaagtagatatgagtccctatatataagtacattgtgtggtggacactgacggattcgaaataaat 33166147  T
Q  294 tattgtattgtattaaagcaaacggttgagataattattaaagcaaatagtatgtgaaataatggtcacaca 365  Q
    ||||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||| ||||||    
T  33166148 tattgtattgtattaaagcaaacagtgaagataattattaaagcaaatagtatgtgaaataatgggcacaca 33166219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 457 - 745
Target Start/End: Original strand, 17785373 - 17785641
Alignment:
Q  457 aattattaaagcaaacagtggggactaaacaacacagacaattttgatcgaatacnnnnnnntatttgattgaaattaattttcaaacagctcaagctcc 556  Q
    ||||||||||||||||| | | ||||| ||||||| ||||||||||| |||||||       ||||||||||||||||||||  |||||||||| |||||    
T  17785373 aattattaaagcaaacactagagactagacaacactgacaattttgaccgaatacaaacaattatttgattgaaattaatttcaaaacagctcacgctcc 17785472  T
Q  557 aacttttccaacagctctttcttccggtcatcgagatgctcttcagaac-taactttagatagagtttcattttcttagcttcagtcttttctttcatca 655  Q
    || |||||||  |||||||| |||  |||||||||||||||||| |||| |||||||| ||| |||||||||||||                     |||    
T  17785473 aagttttccagtagctcttttttctagtcatcgagatgctcttcggaacttaactttacatacagtttcattttct---------------------tca 17785551  T
Q  656 atttgtttttctcttgttgcaccaaggttaactctttcaattgttcaagctcttgctccttgaattgtttgaattcaacccactcctttt 745  Q
    || |||||||||| |||||||||||| |  |||||||||||||||||| ||||||| |||||| || |||||||||||||||||||||||    
T  17785552 atctgtttttctcctgttgcaccaagttgtactctttcaattgttcaatctcttgcaccttgatttctttgaattcaacccactcctttt 17785641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 176 - 365
Target Start/End: Original strand, 51521963 - 51522166
Alignment:
Q  176 attggaagtagat-tgaatgaaatttgtgatattggaagtggatatgaatgagatttgtgatattgaaagtagatatgagtccctat------------- 261  Q
    ||||||||||||| ||||||| |||||||  ||| || || |||||||||||||||||| | |||| ||||||||||||||||||||                 
T  51521963 attggaagtagatatgaatgagatttgtgtaatttgaggtagatatgaatgagatttgttaaattggaagtagatatgagtccctatatataaatacaat 51522062  T
Q  262 gtgtggtggacactgacgcattcaaaataagttattgtattgtattaaagcaaacggttgagataattattaaagcaaatagtatgtgaaataatggtca 361  Q
    |||||||||||| ||||| |||  |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||| ||||||||||| ||    
T  51522063 gtgtggtggacattgacggatttgaaataagttattgtattgtattaaagcaaacaattgagataattattaaagcaaatagtatctgaaataatgggca 51522162  T
Q  362 caca 365  Q
    ||||    
T  51522163 caca 51522166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 441 - 749
Target Start/End: Complemental strand, 38837712 - 38837427
Alignment:
Q  441 acttgacaccattgacaattattaaagcaaacagtggggactaaacaacacagacaattttgatcgaatacnnnnnnntatttgattgaaattaattttc 540  Q
    |||||||| || ||||||||||||||||||||| || || ||  ||||||| ||||||||||| |||||||       |||| ||||| ||||   ||      
T  38837712 acttgacaacactgacaattattaaagcaaacactgaggtcttgacaacaccgacaattttgaccgaatacaaacaaatattggattgcaatt---ttca 38837616  T
Q  541 aaacagctcaagctccaacttttccaacagctctttcttccggtcatcgagatgctcttcagaact-aactttagatagagtttcattttcttagcttca 639  Q
    |||||||||| |||||||||||||||||| |||||| ||||||||||||||||||||||| ||| | ||||||| ||| ||||||||||||||           
T  38837615 aaacagctcacgctccaacttttccaacaactcttttttccggtcatcgagatgctcttcggaatttaactttacatacagtttcattttctt------- 38837523  T
Q  640 gtcttttctttcatcaatttgtttttctcttgttgcaccaaggttaactctttcaattgttcaagctcttgctccttgaattgtttgaattcaacccact 739  Q
                  |||| |||||||||| |||||||||||||| |||| |||||||||||||| ||||||  | |||| || |||||||||||||||||    
T  38837522 --------------caatctgtttttctcctgttgcaccaaggtgaactatttcaattgttcaatctcttgtactttgatttctttgaattcaacccact 38837437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 174 - 340
Target Start/End: Complemental strand, 2476683 - 2476506
Alignment:
Q  174 atattggaagtagattg-aatgaaatttgtgatattggaagtggatatgaatgagatttgtgatattgaaagtagatatgagtcccta------------ 260  Q
    ||||||||| ||||| | ||||| |||||||||||||||| | |||| |||||||||||||||||||| ||||||| |||||||||||                
T  2476683 atattggaaatagataggaatgagatttgtgatattggaaatagataggaatgagatttgtgatattggaagtagacatgagtccctatatataagtaca 2476584  T
Q  261 -tgtgtggtggacactgacgcattcaaaataagttattgtattgtattaaagcaaacggttgagataattattaaagcaaa 340  Q
     ||||||||||||||||||| |||| |||||||||||||||||||||||||||||||  |   ||||||||||||||||||    
T  2476583 ttgtgtggtggacactgacggattcgaaataagttattgtattgtattaaagcaaacact---gataattattaaagcaaa 2476506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 174 - 340
Target Start/End: Original strand, 48406068 - 48406245
Alignment:
Q  174 atattggaagtagattg-aatgaaatttgtgatattggaagtggatatgaatgagatttgtgatattgaaagtagatatgagtcccta------------ 260  Q
    ||||||||| ||||| | ||||| |||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||                
T  48406068 atattggaaatagataggaatgagatttgtgatattggaagtagatatgaatgagatttgtgatattggaagtagatatgagtccctatatataagtaca 48406167  T
Q  261 -tgtgtggtggacactgacgcattcaaaataagttattgtattgtattaaagcaaacggttgagataattattaaagcaaa 340  Q
     ||||| ||||||||||||| |||| |||||| ||||||||||||||||||||| ||  |   ||||||||||||||||||    
T  48406168 ttgtgtagtggacactgacggattcgaaataaattattgtattgtattaaagcagacact---gataattattaaagcaaa 48406245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 107 - 188
Target Start/End: Complemental strand, 18319100 - 18319019
Alignment:
Q  107 ataactttacatatatcagaaaaagagaaagcaaaaagtgcatcgcatgcaataatgcacttctatcatattggaagtagat 188  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| | | |||||||||||||||    
T  18319100 ataactttacatatatcagaaaaagagaaagcaaaaagtgcatcgcatgcaagaatgaacttttgtgatattggaagtagat 18319019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 177 - 261
Target Start/End: Complemental strand, 47298907 - 47298822
Alignment:
Q  177 ttggaagtagat-tgaatgaaatttgtgatattggaagtggatatgaatgagatttgtgatattgaaagtagatatgagtccctat 261  Q
    |||||||||||| ||||||| |||||||| ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  47298907 ttggaagtagatatgaatgagatttgtgaaattggaagtagatatgaatgagatttgtgaaattgaaagtagatatgagtccctat 47298822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 176 - 300
Target Start/End: Original strand, 17785072 - 17785210
Alignment:
Q  176 attggaagtagat-tgaatgaaatttgtgatattggaagtggatatgaatgagatttgtgatattgaaagtagatatgagtcccta-------------t 261  Q
    ||||||||||||| ||||||| |||||||| |||||||||  ||||||||||||||||||| |||| |||||||||||||||||||             |    
T  17785072 attggaagtagatatgaatgagatttgtgaaattggaagtatatatgaatgagatttgtgaaattggaagtagatatgagtccctatatataagtacatt 17785171  T
Q  262 gtgtggtggacactgacgcattcaaaataagttattgta 300  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  17785172 gtgtggtggacactgacggattcaaaataagttattgta 17785210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 174 - 340
Target Start/End: Complemental strand, 48386493 - 48386316
Alignment:
Q  174 atattggaagtagattg-aatgaaatttgtgatattggaagtggatatgaatgagatttgtgatattgaaagtagatatgagtcccta------------ 260  Q
    ||||||||| ||||| | ||||| |||||||||||||||| | |||| |||||||||||||||||||| ||||||| |||||||||||                
T  48386493 atattggaaatagataggaatgagatttgtgatattggaaatagataggaatgagatttgtgatattggaagtagacatgagtccctatatataagtaca 48386394  T
Q  261 -tgtgtggtggacactgacgcattcaaaataagttattgtattgtattaaagcaaacggttgagataattattaaagcaaa 340  Q
     ||||||||||||||| ||| |||| |||||||||||||||||||||||||| ||||  |   ||||||||||||||||||    
T  48386393 ttgtgtggtggacactaacggattcgaaataagttattgtattgtattaaagaaaacact---gataattattaaagcaaa 48386316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 174 - 340
Target Start/End: Original strand, 45240822 - 45240999
Alignment:
Q  174 atattggaagtagattg-aatgaaatttgtgatattggaagtggatatgaatgagatttgtgatattgaaagtagatatgagtcccta------------ 260  Q
    ||||||||| ||||| | ||||| |||||||||||||||| | |||| |||||||||||||||||||| ||||||| |||||||||||                
T  45240822 atattggaaatagataggaatgagatttgtgatattggaaatagataggaatgagatttgtgatattggaagtagacatgagtccctatatataagtaca 45240921  T
Q  261 -tgtgtggtggacactgacgcattcaaaataagttattgtattgtattaaagcaaacggttgagataattattaaagcaaa 340  Q
     |||||||  |||||| ||| |||| |||||||||||||||||||||||||| ||||  |   ||||||||||||||||||    
T  45240922 ttgtgtggacgacactaacggattcgaaataagttattgtattgtattaaagaaaacact---gataattattaaagcaaa 45240999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 18319157 - 18319099
Alignment:
Q  8 gttgttactttacacaatacggttcaaagctcttctaaaggtgtgtgatgctttacaacat 68  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  18319157 gttgttactttacacaatacggttcaaagctcttctaaagg--tgtgatgctttacaacat 18319099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 415 - 491
Target Start/End: Original strand, 31470134 - 31470210
Alignment:
Q  415 gataattattaaagcaaacactacagacttgacaccattgacaattattaaagcaaacagtggggactaaacaacac 491  Q
    |||||||||||||||||||||||| |||| |||| || |||||| |||||||||||||||| ||||||| |||||||    
T  31470134 gataattattaaagcaaacactacggactagacaacactgacaaatattaaagcaaacagtcgggactagacaacac 31470210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 178 - 261
Target Start/End: Complemental strand, 17679654 - 17679570
Alignment:
Q  178 tggaagtagat-tgaatgaaatttgtgatattggaagtggatatgaatgagatttgtgatattgaaagtagatatgagtccctat 261  Q
    ||||||||||| ||||||| |||||||| | ||||||| || ||||||||||||||||| |||| ||||||||||||||| ||||    
T  17679654 tggaagtagatatgaatgagatttgtgaaagtggaagtagacatgaatgagatttgtgaaattggaagtagatatgagtctctat 17679570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 174 - 253
Target Start/End: Original strand, 48406037 - 48406117
Alignment:
Q  174 atattggaagtagattg-aatgaaatttgtgatattggaagtggatatgaatgagatttgtgatattgaaagtagatatga 253  Q
    ||||||||| ||||| | ||||| |||||||||||||||| | |||| |||||||||||||||||||| ||||||||||||    
T  48406037 atattggaaatagataggaatgagatttgtgatattggaaatagataggaatgagatttgtgatattggaagtagatatga 48406117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 177 - 261
Target Start/End: Original strand, 31469805 - 31469890
Alignment:
Q  177 ttggaagtagat-tgaatgaaatttgtgatattggaagtggatatgaatgagatttgtgatattgaaagtagatatgagtccctat 261  Q
    ||||||| |||| ||||||| |||||||| |||| |||| ||| | ||||||| |||||| |||||||||||||||||||||||||    
T  31469805 ttggaagaagatatgaatgagatttgtgaaattgaaagtagattttaatgagacttgtgaaattgaaagtagatatgagtccctat 31469890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 174 - 250
Target Start/End: Original strand, 48406006 - 48406083
Alignment:
Q  174 atattggaagtagattg-aatgaaatttgtgatattggaagtggatatgaatgagatttgtgatattgaaagtagata 250  Q
    ||||||||||||||| | ||||| |||||||||||||||| | |||| |||||||||||||||||||| || ||||||    
T  48406006 atattggaagtagataggaatgagatttgtgatattggaaatagataggaatgagatttgtgatattggaaatagata 48406083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 174 - 253
Target Start/End: Original strand, 51521899 - 51521979
Alignment:
Q  174 atattggaagtagat-tgaatgaaatttgtgatattggaagtggatatgaatgagatttgtgatattgaaagtagatatga 253  Q
    |||||||||| |||| | ||||| |||||||| ||| ||||| |||||||||||||||||||| |||| ||||||||||||    
T  51521899 atattggaagcagatataaatgatatttgtgaaattcgaagtagatatgaatgagatttgtgaaattggaagtagatatga 51521979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 190 - 253
Target Start/End: Original strand, 17785056 - 17785119
Alignment:
Q  190 gaatgaaatttgtgatattggaagtggatatgaatgagatttgtgatattgaaagtagatatga 253  Q
    |||||| |||||||| ||||||||| |||||||||||||||||||| |||| ||||| ||||||    
T  17785056 gaatgagatttgtgaaattggaagtagatatgaatgagatttgtgaaattggaagtatatatga 17785119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 323 - 365
Target Start/End: Original strand, 51522172 - 51522214
Alignment:
Q  323 gataattattaaagcaaatagtatgtgaaataatggtcacaca 365  Q
    |||||||||||||||||||||||||||||||||||| ||||||    
T  51522172 gataattattaaagcaaatagtatgtgaaataatgggcacaca 51522214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 174 - 250
Target Start/End: Complemental strand, 2476714 - 2476637
Alignment:
Q  174 atattggaagtagattg-aatgaaatttgtgatattggaagtggatatgaatgagatttgtgatattgaaagtagata 250  Q
    ||||||||| ||||| | ||||| |||||||||||||||| | |||| |||||||||||||||||||| || ||||||    
T  2476714 atattggaaatagataggaatgagatttgtgatattggaaatagataggaatgagatttgtgatattggaaatagata 2476637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 180 - 234
Target Start/End: Original strand, 51521936 - 51521991
Alignment:
Q  180 gaagtagat-tgaatgaaatttgtgatattggaagtggatatgaatgagatttgtg 234  Q
    ||||||||| ||||||| |||||||| ||||||||| |||||||||||||||||||    
T  51521936 gaagtagatatgaatgagatttgtgaaattggaagtagatatgaatgagatttgtg 51521991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 324 - 365
Target Start/End: Complemental strand, 38837832 - 38837791
Alignment:
Q  324 ataattattaaagcaaatagtatgtgaaataatggtcacaca 365  Q
    |||||||||||||||||||||| |||||||||||| ||||||    
T  38837832 ataattattaaagcaaatagtaggtgaaataatgggcacaca 38837791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 201 - 250
Target Start/End: Original strand, 48406003 - 48406052
Alignment:
Q  201 gtgatattggaagtggatatgaatgagatttgtgatattgaaagtagata 250  Q
    |||||||||||||| |||| |||||||||||||||||||| || ||||||    
T  48406003 gtgatattggaagtagataggaatgagatttgtgatattggaaatagata 48406052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 415 - 476
Target Start/End: Complemental strand, 2476277 - 2476214
Alignment:
Q  415 gataattattaaagcaaacactacagacttgacacca--ttgacaattattaaagcaaacagtg 476  Q
    |||||||||||||||||||||||| |||| |||| ||   ||| ||||||||||||||||||||    
T  2476277 gataattattaaagcaaacactacggactagacaacactctgataattattaaagcaaacagtg 2476214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 415 - 476
Target Start/End: Complemental strand, 2476359 - 2476296
Alignment:
Q  415 gataattattaaagcaaacactacagacttgacacca--ttgacaattattaaagcaaacagtg 476  Q
    |||||||||||||||||||||||| |||| |||| ||   ||| ||||||||||||||||||||    
T  2476359 gataattattaaagcaaacactacggactagacaacactctgataattattaaagcaaacagtg 2476296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 415 - 476
Target Start/End: Complemental strand, 2476441 - 2476378
Alignment:
Q  415 gataattattaaagcaaacactacagacttgacacca--ttgacaattattaaagcaaacagtg 476  Q
    |||||||||||||||||||||||| |||| |||| ||   ||| ||||||||||||||||||||    
T  2476441 gataattattaaagcaaacactacggactagacaacactctgataattattaaagcaaacagtg 2476378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 421 - 491
Target Start/End: Original strand, 31470179 - 31470249
Alignment:
Q  421 tattaaagcaaacactacagacttgacaccattgacaattattaaagcaaacagtggggactaaacaacac 491  Q
    |||||||||||||| |   |||| |||| || ||| |||||||||||||||||||| |||||| |||||||    
T  31470179 tattaaagcaaacagtcgggactagacaacactgataattattaaagcaaacagtgaggactagacaacac 31470249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 324 - 358
Target Start/End: Complemental strand, 38837880 - 38837846
Alignment:
Q  324 ataattattaaagcaaatagtatgtgaaataatgg 358  Q
    |||||||||||||||||||||| ||||||||||||    
T  38837880 ataattattaaagcaaatagtaggtgaaataatgg 38837846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 324 - 358
Target Start/End: Complemental strand, 47298743 - 47298709
Alignment:
Q  324 ataattattaaagcaaatagtatgtgaaataatgg 358  Q
    |||||||||||||||||||||| ||||||||||||    
T  47298743 ataattattaaagcaaatagtaggtgaaataatgg 47298709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 250
Target Start/End: Complemental strand, 2476717 - 2476668
Alignment:
Q  201 gtgatattggaagtggatatgaatgagatttgtgatattgaaagtagata 250  Q
    |||||||||||| | |||| |||||||||||||||||||| || ||||||    
T  2476717 gtgatattggaaatagataggaatgagatttgtgatattggaaatagata 2476668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 222
Target Start/End: Original strand, 8470002 - 8470051
Alignment:
Q  174 atattggaagtagat-tgaatgaaatttgtgatattggaagtggatatga 222  Q
    ||||||||||||||| ||||||| |||||||||||| ||||| |||||||    
T  8470002 atattggaagtagatatgaatgagatttgtgatattagaagtagatatga 8470051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 324 - 365
Target Start/End: Original strand, 17785237 - 17785278
Alignment:
Q  324 ataattattaaagcaaatagtatgtgaaataatggtcacaca 365  Q
    |||||||||||||||||||||| ||||||||| || ||||||    
T  17785237 ataattattaaagcaaatagtaggtgaaataacgggcacaca 17785278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 250
Target Start/End: Original strand, 45240819 - 45240868
Alignment:
Q  201 gtgatattggaagtggatatgaatgagatttgtgatattgaaagtagata 250  Q
    |||||||||||| | |||| |||||||||||||||||||| || ||||||    
T  45240819 gtgatattggaaatagataggaatgagatttgtgatattggaaatagata 45240868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 324 - 365
Target Start/End: Complemental strand, 47298695 - 47298654
Alignment:
Q  324 ataattattaaagcaaatagtatgtgaaataatggtcacaca 365  Q
    |||||||||||||||||| ||| |||||||||||| ||||||    
T  47298695 ataattattaaagcaaattgtaggtgaaataatgggcacaca 47298654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 250
Target Start/End: Complemental strand, 48386496 - 48386447
Alignment:
Q  201 gtgatattggaagtggatatgaatgagatttgtgatattgaaagtagata 250  Q
    |||||||||||| | |||| |||||||||||||||||||| || ||||||    
T  48386496 gtgatattggaaatagataggaatgagatttgtgatattggaaatagata 48386447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 415 - 480
Target Start/End: Original strand, 48406228 - 48406293
Alignment:
Q  415 gataattattaaagcaaacactacagacttgacaccattgacaattattaaagcaaacagtgggga 480  Q
    |||||||||||||||||||| |   |||| ||||  | ||||||||||||||||||||||| ||||    
T  48406228 gataattattaaagcaaacagtcgggactagacaatactgacaattattaaagcaaacagtcggga 48406293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 253
Target Start/End: Original strand, 51521871 - 51521948
Alignment:
Q  177 ttggaagtagattgaat-gaaatttgtgatattggaagtggatatgaatgagatttgtgatattgaaagtagatatga 253  Q
    ||||||||||||||||| |   ||||||||||||||||  ||||| ||||| |||||||| |||  ||||||||||||    
T  51521871 ttggaagtagattgaatagttttttgtgatattggaagcagatataaatgatatttgtgaaattcgaagtagatatga 51521948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 310; Significance: 1e-174; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 310; E-Value: 1e-174
Query Start/End: Original strand, 180 - 745
Target Start/End: Original strand, 24113873 - 24114437
Alignment:
Q  180 gaagtagattgaatgaaatttgtgatattggaagtggatatgaatgagatttgtgatattgaaagtagatatgagtccctat-------------gtgtg 266  Q
    ||||||||||||||||  ||||||||||| |||||  |||||||||||||||||||||||| ||||| ||||||||| ||||             ||||     
T  24113873 gaagtagattgaatgagttttgtgatatttgaagtatatatgaatgagatttgtgatattggaagtatatatgagtctctatatataagtacattgtgtt 24113972  T
Q  267 gtggacactgacgcattcaaaataagttattgtattgtattaaagcaaacggttgagataattattaaagcaaatagtatgtgaaataatggtcacacat 366  Q
     || ||||||||| |||| ||||||||||||||||||||||| |||||||  | |||||||||||||||||||||| ||||||||||||||| |||||||    
T  24113973 ctgtacactgacggattcgaaataagttattgtattgtattatagcaaacaatagagataattattaaagcaaatattatgtgaaataatgggcacacat 24114072  T
Q  367 tccaacgaatggaggaagaccttcaaatag--tatgtgaaataagtcacggataattattaaagcaaacactacagacttgacaccattgacaattatta 464  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  24114073 tccaacgaatggaggaagaccttcaaatagtatatgtgaaataagtcacggataattattaaagcacacactacagacttgacaccactgacaattatta 24114172  T
Q  465 aagcaaacagtggggactaaacaacacagacaattttgatcgaatacnnnnnnntatttgattgaaattaattttcaaacagctcaagctccaacttttc 564  Q
    |||||||| |||||||||| ||||||| ||||||| | |               |||||||||||||||||||||||||||||||| |||||||||||||    
T  24114173 aagcaaactgtggggactagacaacactgacaattatta---------------tatttgattgaaattaattttcaaacagctcacgctccaacttttc 24114257  T
Q  565 caacagctctttcttccggtcatcgagatgctcttcagaac-taactttagatagagtttcattttcttagcttcagtcttttctttcatcaatttgttt 663  Q
    ||||| |||||||||||||||||||||||||||||| |||| |||||||||||  |  ||||||||||||||||||  |||||| |||||||||||||||    
T  24114258 caacaactctttcttccggtcatcgagatgctcttcggaacttaactttagatgcaacttcattttcttagcttca--cttttccttcatcaatttgttt 24114355  T
Q  664 ttctcttgttgcaccaaggttaactctttcaattgttcaagctcttgctccttgaattgtttgaattcaacccactcctttt 745  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  24114356 ttctcatgttgcaccaaggttaactctttcaattgttcaagctcttgcttcttgaattgtttgaattcaatccactcctttt 24114437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 155; E-Value: 7e-82
Query Start/End: Original strand, 415 - 745
Target Start/End: Complemental strand, 17959366 - 17959035
Alignment:
Q  415 gataattattaaagcaaacactacagacttgacaccattgacaattattaaagcaaacagtggggactaaacaacacagacaattttgatcgaatacnnn 514  Q
    |||||||||||||||||||||||| |||| |||| || |||||| |||||||||||||||| ||||||| ||||||| || ||| ||||  ||||||       
T  17959366 gataattattaaagcaaacactacggactagacaacactgacaaatattaaagcaaacagtcgggactagacaacactgataatgttgactgaatacaaa 17959267  T
Q  515 nnnntatttgattgaaattaattttcaaacagctcaagctccaacttttccaacagctctttcttccggtcatcgagatgctcttcagaac-taacttta 613  Q
        ||||||||| |||||||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||||||||||    | ||||||||    
T  17959266 caaatatttgattaaaattaattttcaaacagctcacgctccaacttctccaacagctccttcttccggtcatcgagatgctcttcgtcccttaacttta 17959167  T
Q  614 gatagagtttcattttcttagcttcagtcttttctttcatcaatttgtttttctcttgttgcaccaaggttaactctttcaattgttcaagctcttgctc 713  Q
    |||| | ||||||||| ||||||| ||||||||||| || ||| |||||||||| ||||| ||||||  ||||||||||||||||||||| |||||||||    
T  17959166 gatacattttcatttttttagcttgagtcttttcttgcagcaacttgtttttctgttgtttcaccaaatttaactctttcaattgttcaatctcttgctc 17959067  T
Q  714 cttgaattgtttgaattcaacccactcctttt 745  Q
     || |||| |||||||| |||||| |||||||    
T  17959066 ttttaattctttgaattgaacccattcctttt 17959035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 155; E-Value: 7e-82
Query Start/End: Original strand, 415 - 745
Target Start/End: Original strand, 34840476 - 34840807
Alignment:
Q  415 gataattattaaagcaaacactacagacttgacaccattgacaattattaaagcaaacagtggggactaaacaacacagacaattttgatcgaatacnnn 514  Q
    |||||||||||||||||||||||| |||| |||| || |||||| |||||||||||||||| ||||||| ||||||| || ||| ||||  ||||||       
T  34840476 gataattattaaagcaaacactacggactagacaacactgacaaatattaaagcaaacagtcgggactagacaacactgataatgttgactgaatacaaa 34840575  T
Q  515 nnnntatttgattgaaattaattttcaaacagctcaagctccaacttttccaacagctctttcttccggtcatcgagatgctcttcagaac-taacttta 613  Q
        ||||||||| |||||||||||||||||||||| ||||||||||  |||||||||| ||||||||||||||||||||||||||    | ||||||||    
T  34840576 caaatatttgattaaaattaattttcaaacagctcacgctccaacttccccaacagctcattcttccggtcatcgagatgctcttcgtcccttaacttta 34840675  T
Q  614 gatagagtttcattttcttagcttcagtcttttctttcatcaatttgtttttctcttgttgcaccaaggttaactctttcaattgttcaagctcttgctc 713  Q
    |||| | ||||||||| ||||||| ||||||||||| || ||| |||||||||| ||||| |||||| |||||||||||||||||||||| |||||||||    
T  34840676 gatacattttcatttttttagcttgagtcttttcttgcagcaacttgtttttctgttgtttcaccaaagttaactctttcaattgttcaatctcttgctc 34840775  T
Q  714 cttgaattgtttgaattcaacccactcctttt 745  Q
     || |||| |||||||| |||||| |||||||    
T  34840776 ttttaattctttgaattgaacccattcctttt 34840807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 153; E-Value: 1e-80
Query Start/End: Original strand, 477 - 745
Target Start/End: Original strand, 8221239 - 8221508
Alignment:
Q  477 gggactaaacaacacagacaattttgatcgaatacnnnnnnntatttgattgaaattaattttcaaacagctcaagctccaacttttccaacagctcttt 576  Q
    ||||||| ||||||| || ||||||||  ||||||       ||||||||| |||||||||||||||||||||| ||||||||||| |||||||||||||    
T  8221239 gggactagacaacactgataattttgactgaatacaaacaaatatttgattaaaattaattttcaaacagctcacgctccaactttcccaacagctcttt 8221338  T
Q  577 cttccggtcatcgagatgctcttcagaact-aactttagatagagtttcattttcttagcttcagtcttttctttcatcaatttgtttttctcttgttgc 675  Q
    |||||||||||||||||||||||| ||||| ||||||||||| | ||||||||||||||||| ||||||||||| |||||| || ||||||| ||||| |    
T  8221339 cttccggtcatcgagatgctcttcggaacttaactttagatacattttcattttcttagctttagtcttttcttgcatcaacttatttttcttttgtttc 8221438  T
Q  676 accaaggttaactctttcaattgttcaagctcttgctccttgaattgtttgaattcaacccactcctttt 745  Q
    ||||||||||||| |||||||||||||| |||||||||||| |||| |||||||| ||||||||||||||    
T  8221439 accaaggttaactttttcaattgttcaatctcttgctcctttaattctttgaattgaacccactcctttt 8221508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 415 - 745
Target Start/End: Original strand, 633735 - 634066
Alignment:
Q  415 gataattattaaagcaaacactacagacttgacaccattgacaattattaaagcaaacagtggggactaaacaacacagacaattttgatcgaatacnnn 514  Q
    |||||||||||||||||||||||| |||| |||| || |||||| |||||||||||||||| ||||||| ||||||| || ||| ||||  ||||||       
T  633735 gataattattaaagcaaacactacggactagacaacactgacaaatattaaagcaaacagtcgggactagacaacactgataatgttgactgaatacaaa 633834  T
Q  515 nnnntatttgattgaaattaattttcaaacagctcaagctccaacttttccaacagctctttcttccggtcatcgagatgctcttcagaac-taacttta 613  Q
        ||||||||| |||||||||||||||||||||| ||||||| || ||||||||||| ||||||||||||||||||||||||||    | ||||||||    
T  633835 caaatatttgattaaaattaattttcaaacagctcacgctccaaattctccaacagctccttcttccggtcatcgagatgctcttcgtcccttaacttta 633934  T
Q  614 gatagagtttcattttcttagcttcagtcttttctttcatcaatttgtttttctcttgttgcaccaaggttaactctttcaattgttcaagctcttgctc 713  Q
    |||| | ||||||||| ||||||| ||||||||||| || ||| |||||||||| || || ||||||  ||||||||||||||||||||| |||||||||    
T  633935 gatacattttcatttttttagcttgagtcttttcttgcagcaacttgtttttctgttttttcaccaaatttaactctttcaattgttcaatctcttgctc 634034  T
Q  714 cttgaattgtttgaattcaacccactcctttt 745  Q
     || |||| |||||||| |||||| |||||||    
T  634035 ttttaattctttgaattgaacccattcctttt 634066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 415 - 745
Target Start/End: Complemental strand, 6378498 - 6378167
Alignment:
Q  415 gataattattaaagcaaacactacagacttgacaccattgacaattattaaagcaaacagtggggactaaacaacacagacaattttgatcgaatacnnn 514  Q
    |||||||||||||||||||||||| |||| |||| || |||||| |||||||||||||||| ||||||| ||||||| || ||| ||||  ||||||       
T  6378498 gataattattaaagcaaacactacggactagacaacactgacaaatattaaagcaaacagtcgggactagacaacactgataatgttgactgaatacaaa 6378399  T
Q  515 nnnntatttgattgaaattaattttcaaacagctcaagctccaacttttccaacagctctttcttccggtcatcgagatgctcttcagaac-taacttta 613  Q
        ||||||||| |||||||||||||||||||||| ||||||| || ||||||||||| ||||||||||||||||||||||||||    | ||||||||    
T  6378398 caaatatttgattaaaattaattttcaaacagctcacgctccaaattctccaacagctccttcttccggtcatcgagatgctcttcgtcccttaacttta 6378299  T
Q  614 gatagagtttcattttcttagcttcagtcttttctttcatcaatttgtttttctcttgttgcaccaaggttaactctttcaattgttcaagctcttgctc 713  Q
    |||| | ||||||||| ||||||| ||||||||||| || ||| |||||||||| || || ||||||  ||||||||||||||||||||| |||||||||    
T  6378298 gatacattttcatttttttagcttgagtcttttcttgcagcaacttgtttttctgttttttcaccaaatttaactctttcaattgttcaatctcttgctc 6378199  T
Q  714 cttgaattgtttgaattcaacccactcctttt 745  Q
     || |||| |||||||| |||||| |||||||    
T  6378198 ttttaattctttgaattgaacccattcctttt 6378167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 146; E-Value: 2e-76
Query Start/End: Original strand, 174 - 434
Target Start/End: Complemental strand, 13264673 - 13264400
Alignment:
Q  174 atattggaagtagattgaatgaaatttgtgatattggaagtggatatgaatgagatttgtgatattgaaagtagatatgagtccctat------------ 261  Q
    ||||||||| || ||||||||| |||||||||||||||||| ||||||||||||||||||||  ||| || |||||||||||| ||||                
T  13264673 atattggaaatatattgaatgagatttgtgatattggaagtagatatgaatgagatttgtgaagttggaaatagatatgagtctctatatataagtacat 13264574  T
Q  262 -gtgtggtggacactgacgcattcaaaataagttattgtattgtattaaagcaaacggttgagataattattaaagcaaatagtatgtgaaataatggtc 360  Q
     |||||||||||||||||  ||||||||||||||||||||||||||||||| |||  || | |||||||||||||||||||||||||||||||||||| |    
T  13264573 tgtgtggtggacactgacagattcaaaataagttattgtattgtattaaagtaaatagtggggataattattaaagcaaatagtatgtgaaataatgggc 13264474  T
Q  361 acacattccaacgaatggaggaagaccttcaaatagtatgtgaaataagtcacggataattattaaagcaaaca 434  Q
    ||||||||||||||||||||  ||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  13264473 acacattccaacgaatggagatagaccttcaaatagtatatgaaataagtcacagataattattaaagcaaaca 13264400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 199 - 499
Target Start/End: Original strand, 8220612 - 8220924
Alignment:
Q  199 ttgtgatattggaagtggatatgaatgagatttgtgatattgaaagtagatatgagtccc-tatgtgtggtggacactgacgcattcaaaataagttatt 297  Q
    |||||||||||||||| ||||||||||||||||||||||||| ||||| |||||| |    | |||||||||||| | |||| |||| ||||||||||||    
T  8220612 ttgtgatattggaagtagatatgaatgagatttgtgatattggaagtatatatgaatgagatttgtgtggtggacccagacggattcgaaataagttatt 8220711  T
Q  298 gtattgtattaaagcaaacggttgagataattattaaag---caaatagtatg------tgaaataatggtcacacattccaacgaatggaggaagacct 388  Q
    |||||||||||||| |||| || | ||||||||||||||   | |||| |||       | ||| | ||| |||||||||||  ||||||||||||||||    
T  8220712 gtattgtattaaagtaaacagtggggataattattaaagtcacgaataatataattttattaaaaattgggcacacattccattgaatggaggaagacct 8220811  T
Q  389 tcaaatagtatgtgaaataa--gtcacggataattattaaagcaaacactacagacttgacaccattgacaattattaaagcaaacagtggggactaaac 486  Q
    ||||||||||||||||||||  |||||||||||||  ||||||||||||||  |||| |||| || ||||||||||||||||||||| ||||||||| ||    
T  8220812 tcaaatagtatgtgaaataaaagtcacggataattggtaaagcaaacactagggactagacaacactgacaattattaaagcaaacactggggactagac 8220911  T
Q  487 aacacagacaatt 499  Q
    ||||| |||||||    
T  8220912 aacactgacaatt 8220924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 415 - 632
Target Start/End: Original strand, 18641272 - 18641490
Alignment:
Q  415 gataattattaaagcaaacactacagacttgacaccattgacaattattaaagcaaacagtggggactaaacaacacagacaattttgatcgaatacnnn 514  Q
    |||||||||||||| ||||| |  |||||  ||| |||||||||||||||||  ||||| |||  |||| ||||||| ||||||||||| |||||||       
T  18641272 gataattattaaagtaaacattgaagactaaacaacattgacaattattaaactaaacattggaaactagacaacactgacaattttgaacgaatacaaa 18641371  T
Q  515 nnnntatttgattgaaattaattttcaaacagctcaagctccaacttttccaacagctctttcttccggtcatcgagatgctcttcagaac-taacttta 613  Q
        ||||||||||||||||||||  |||||||||| |||||||||| ||||||| |||||| || |||||||||||||||||||| |||| ||||||||    
T  18641372 caaatatttgattgaaattaatttcaaaacagctcacgctccaacttctccaacaactctttttttcggtcatcgagatgctcttcggaacttaacttta 18641471  T
Q  614 gatagagtttcattttctt 632  Q
     ||| | ||||||||||||    
T  18641472 tatacaatttcattttctt 18641490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 177 - 365
Target Start/End: Complemental strand, 24917952 - 24917746
Alignment:
Q  177 ttggaagtagat-tgaatgaaatttgtgatattggaagtggatatgaatgagatttgtgatattgaaagtagatatgagtccctat-------------g 262  Q
    |||||||||||| ||||||| |||| ||| |||| |||| |||||||||||||||||||| |||| ||| || |||||||||||||             |    
T  24917952 ttggaagtagatatgaatgagatttatgaaattgaaagtagatatgaatgagatttgtgaaattggaagcaggtatgagtccctatatataagtaaattg 24917853  T
Q  263 tgtggtggacactgacgcattcaaaataagttattgtattgtattaaagcaaacggttgagataattattaaa----gcaaatagtatgtgaaataatgg 358  Q
    ||||||||||||||||| |||  ||||||||||||||||||||||||||||||| || |||||||||||||||    |||||||||||||||||||||||    
T  24917852 tgtggtggacactgacggatttgaaataagttattgtattgtattaaagcaaacagtggagataattattaaagcaagcaaatagtatgtgaaataatgg 24917753  T
Q  359 tcacaca 365  Q
     ||||||    
T  24917752 gcacaca 24917746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 360 - 491
Target Start/End: Original strand, 8221067 - 8221200
Alignment:
Q  360 cacacattccaacgaatggaggaagaccttcaaatagtatgtgaaat--aagtcacggataattattaaagcaaacactacagacttgacaccattgaca 457  Q
    |||||||||||||||||||||||||||||||||||||| | ||||||  |||||||||||||||  ||||||||||||||  ||||  ||| || |||||    
T  8221067 cacacattccaacgaatggaggaagaccttcaaatagtgtttgaaataaaagtcacggataattggtaaagcaaacactagggactaaacaacactgaca 8221166  T
Q  458 attattaaagcaaacagtggggactaaacaacac 491  Q
    |||||||||||||||| |||||| || |||||||    
T  8221167 attattaaagcaaacactggggattagacaacac 8221200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 418 - 745
Target Start/End: Complemental strand, 24917651 - 24917344
Alignment:
Q  418 aattattaaagcaaacactacagacttgacaccattgacaattattaaagcaaacagtggggactaaacaacacagacaattttgatcgaatacnnnnnn 517  Q
    ||||||||||| ||||| |   |||| |||| || || |||||||||||| ||||| |||  |||| ||||||| ||||||||||| | || ||          
T  24917651 aattattaaagtaaacattggggactagacaacactggcaattattaaagtaaacattggatactagacaacactgacaattttgaccaaacacaaacaa 24917552  T
Q  518 ntatttgattgaaattaattttcaaacagctcaagctccaacttttccaacagctctttcttccggtcatcgagatgctcttcagaac-taactttagat 616  Q
     ||||||| ||||||||||||  |||||||| |  ||||||||  |||||||||||||| ||||||||||| ||||||||||| |||| |||||||| ||    
T  24917551 atatttgactgaaattaatttcaaaacagcttactctccaactcctccaacagctcttttttccggtcatcaagatgctcttcggaacttaactttacat 24917452  T
Q  617 agagtttcattttcttagcttcagtcttttctttcatcaatttgtttttctcttgttgcaccaaggttaactctttcaattgttcaagctcttgctcctt 716  Q
    | |||||||||||||                     |||||||||||||||| ||||||| |||| | ||||||||||||||||||| ||||||  ||||    
T  24917451 acagtttcattttct---------------------tcaatttgtttttctcctgttgcatcaagttgaactctttcaattgttcaatctcttgggcctt 24917373  T
Q  717 gaattgtttgaattcaacccactcctttt 745  Q
    || || |||||||| ||||||||||||||    
T  24917372 gatttctttgaattgaacccactcctttt 24917344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 201 - 340
Target Start/End: Original strand, 34840262 - 34840411
Alignment:
Q  201 gtgatattggaagtggatatgaatgagatttgtgatattgaaagtagatatgagtccctat-------------gtgtggtggacactgacgcattcaaa 287  Q
    |||||||||||| | |||| |||||||||||||||||||| ||||||| ||||||||||||             |||||||||||||||||| |||| ||    
T  34840262 gtgatattggaaatagataggaatgagatttgtgatattggaagtagacatgagtccctatatataagtacattgtgtggtggacactgacggattcgaa 34840361  T
Q  288 ataagttattgtattgtattaaagcaaacggttgagataattattaaagcaaa 340  Q
    |||||||||||||||||||||||||||||  |   ||||||||||||||||||    
T  34840362 ataagttattgtattgtattaaagcaaacact---gataattattaaagcaaa 34840411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 174 - 340
Target Start/End: Complemental strand, 17959649 - 17959472
Alignment:
Q  174 atattggaagtagattg-aatgaaatttgtgatattggaagtggatatgaatgagatttgtgatattgaaagtagatatgagtcccta------------ 260  Q
    ||||||||| ||||| | ||||| |||||||||||||||| | |||| |||||||||||||||||||| ||||||| |||||||||||                
T  17959649 atattggaaatagataggaatgagatttgtgatattggaaatagataggaatgagatttgtgatattggaagtagacatgagtccctatatataagtaca 17959550  T
Q  261 -tgtgtggtggacactgacgcattcaaaataagttattgtattgtattaaagcaaacggttgagataattattaaagcaaa 340  Q
     |||||||  |||||| ||| |||| |||||||||||||||||||||||||| ||||  |   ||||||||||||||||||    
T  17959549 ttgtgtggacgacactaacggattcgaaataagttattgtattgtattaaagaaaacact---gataattattaaagcaaa 17959472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 304 - 365
Target Start/End: Original strand, 18641121 - 18641182
Alignment:
Q  304 tattaaagcaaacggttgagataattattaaagcaaatagtatgtgaaataatggtcacaca 365  Q
    ||||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||    
T  18641121 tattaaagcaaacagtggagataattattaaagcaaatagtatgtgaaataatggacacaca 18641182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 661 - 745
Target Start/End: Original strand, 18641498 - 18641582
Alignment:
Q  661 tttttctcttgttgcaccaaggttaactctttcaattgttcaagctcttgctccttgaattgtttgaattcaacccactcctttt 745  Q
    ||| |||| |||||||||||||| |||| |||||||| ||||| ||||||| |||| | || |||||||||||||||||||||||    
T  18641498 tttgtctcctgttgcaccaaggtgaactttttcaattcttcaatctcttgcaccttaatttctttgaattcaacccactcctttt 18641582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 177 - 261
Target Start/End: Original strand, 633194 - 633279
Alignment:
Q  177 ttggaagtagat-tgaatgaaatttgtgatattggaagtggatatgaatgagatttgtgatattgaaagtagatatgagtccctat 261  Q
    ||||||| |||| ||||||| |||||||| |||| |||| ||| | ||||||| |||||| |||||||||||||||||||||||||    
T  633194 ttggaagaagatatgaatgagatttgtgaaattgaaagtagattttaatgagacttgtgaaattgaaagtagatatgagtccctat 633279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 177 - 261
Target Start/End: Complemental strand, 6378892 - 6378807
Alignment:
Q  177 ttggaagtagat-tgaatgaaatttgtgatattggaagtggatatgaatgagatttgtgatattgaaagtagatatgagtccctat 261  Q
    ||||||| |||| ||||||| |||||||| |||| |||| ||| | ||||||| |||||| |||||||||||||||||||||||||    
T  6378892 ttggaagaagatatgaatgagatttgtgaaattgaaagtagattttaatgagacttgtgaaattgaaagtagatatgagtccctat 6378807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 8220617 - 8220678
Alignment:
Q  174 atattggaagtagat-tgaatgaaatttgtgatattggaagtggatatgaatgagatttgtg 234  Q
    ||||||||||||||| ||||||| ||||||||||||||||||  ||||||||||||||||||    
T  8220617 atattggaagtagatatgaatgagatttgtgatattggaagtatatatgaatgagatttgtg 8220678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 174 - 253
Target Start/End: Complemental strand, 13264702 - 13264625
Alignment:
Q  174 atattggaagtagattgaatgaaatttgtgatattggaagtggatatgaatgagatttgtgatattgaaagtagatatga 253  Q
    |||||||||||||||||||| |  ||||||||||||||| |  || ||||||||||||||||||||| ||||||||||||    
T  13264702 atattggaagtagattgaat-agttttgtgatattggaaatatat-tgaatgagatttgtgatattggaagtagatatga 13264625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 418 - 491
Target Start/End: Original strand, 8220882 - 8220955
Alignment:
Q  418 aattattaaagcaaacactacagacttgacaccattgacaattattaaagcaaacagtggggactaaacaacac 491  Q
    |||||||||||||||||||   |||| |||| || ||||||||| ||||||||||| ||||||||| |||||||    
T  8220882 aattattaaagcaaacactggggactagacaacactgacaattactaaagcaaacactggggactagacaacac 8220955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 415 - 497
Target Start/End: Original strand, 34840435 - 34840519
Alignment:
Q  415 gataattattaaagcaaacactacagacttgacacca--ttgacaattattaaagcaaacagtggggactaaacaacacagacaa 497  Q
    |||||||||||||||||||||||| |||| |||| ||   ||| ||||||||||||||||| |  |||||| ||||||| |||||    
T  34840435 gataattattaaagcaaacactacggactagacaacactctgataattattaaagcaaacactacggactagacaacactgacaa 34840519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 418 - 483
Target Start/End: Original strand, 8220921 - 8220986
Alignment:
Q  418 aattattaaagcaaacactacagacttgacaccattgacaattattaaagcaaacagtggggacta 483  Q
    ||||| |||||||||||||   |||| |||| || ||| ||||||||||||||||| |||||||||    
T  8220921 aattactaaagcaaacactggggactagacaacactgataattattaaagcaaacactggggacta 8220986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 250
Target Start/End: Complemental strand, 17959652 - 17959603
Alignment:
Q  201 gtgatattggaagtggatatgaatgagatttgtgatattgaaagtagata 250  Q
    |||||||||||| | |||| |||||||||||||||||||| || ||||||    
T  17959652 gtgatattggaaatagataggaatgagatttgtgatattggaaatagata 17959603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 216 - 261
Target Start/End: Original strand, 18641049 - 18641094
Alignment:
Q  216 gatatgaatgagatttgtgatattgaaagtagatatgagtccctat 261  Q
    ||||| |||||||||||||| | || ||||||||||||||||||||    
T  18641049 gatattaatgagatttgtgaaaatggaagtagatatgagtccctat 18641094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 197; Significance: 1e-107; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 360 - 745
Target Start/End: Complemental strand, 29617654 - 29617266
Alignment:
Q  360 cacacattccaacgaatggaggaagaccttcaaatagtatgtgaaataa--gtcacggataattattaaagcaaacactacagacttgacaccattgaca 457  Q
    ||||||||||||| |||||||||| || |||||||||| | ||||||||  |||||||||||||  ||||||||||||||  |||| |||| || |||||    
T  29617654 cacacattccaacaaatggaggaacactttcaaatagtgtttgaaataaaagtcacggataattggtaaagcaaacactagggactagacaacactgaca 29617555  T
Q  458 attattaaagcaaacagtggggactaaacaacacagacaattttgatcgaatacnnnnnnntatttgattgaaattaattttcaaacagctcaagctcca 557  Q
    | |||||||||||||||| ||||||| ||||||| || ||||||||   |||||       ||||||||| |||||||||||||||||||||| ||||||    
T  29617554 aatattaaagcaaacagtcgggactagacaacactgataattttgactaaatacaaacaaatatttgattaaaattaattttcaaacagctcacgctcca 29617455  T
Q  558 acttttccaacagctctttcttccggtcatcgagatgctcttcagaact-aactttagatagagtttcattttcttagcttcagtcttttctttcatcaa 656  Q
    ||||  |||||||||||||||| |||||||||||||||||||||||||| ||||||||||| | ||||||||||||||||| ||||||||||| || |||    
T  29617454 acttccccaacagctctttctttcggtcatcgagatgctcttcagaacttaactttagatacattttcattttcttagcttgagtcttttcttgcagcaa 29617355  T
Q  657 tttgtttttctcttgttgcaccaaggttaactctttcaattgttcaagctcttgctccttgaattgtttgaattcaacccactcctttt 745  Q
     |||||||||| ||||| |||||||||||||||||||||||||||||  ||||||||||| |||| |||||||| ||||||||||||||    
T  29617354 cttgtttttctgttgtttcaccaaggttaactctttcaattgttcaatatcttgctcctttaattctttgaattgaacccactcctttt 29617266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 360 - 745
Target Start/End: Complemental strand, 30646989 - 30646602
Alignment:
Q  360 cacacattccaacgaatggaggaagaccttcaaatagtatgtgaaataa--gtcacggataattattaaagcaaacactacagacttgacaccattgaca 457  Q
    |||||||| |||| |||||||||||||||||||||||| | ||||||||  |||||||||||||  ||||||||||||||  |||| |||| || |||||    
T  30646989 cacacatttcaacaaatggaggaagaccttcaaatagtgtttgaaataaaagtcacggataattggtaaagcaaacactagggactagacaacactgaca 30646890  T
Q  458 attattaaagcaaacagtggggactaaacaacacagacaattttgatcgaatacnnnnnnntatttgattgaaattaattttcaaacagctcaagctcca 557  Q
    | |||||||||||||| | | ||||| ||||||| || ||||||||  ||||||       ||||||||| |||||||||||||||||||||| ||||||    
T  30646889 aatattaaagcaaacactcgtgactagacaacactgataattttgactgaatacaaacaaatatttgattaaaattaattttcaaacagctcacgctcca 30646790  T
Q  558 acttttccaacagctctttcttccggtcatcgagatgctcttcagaact-aactttagatagagtttcattttcttagcttcagtcttttctttcatcaa 656  Q
    |||||||||||||||||||| | ||||||||||||||||||||| |||| ||||||||||| | ||||||||||||||||||||||||||||| || |||    
T  30646789 acttttccaacagctctttcattcggtcatcgagatgctcttcataacttaactttagataca-tttcattttcttagcttcagtcttttcttgcagcaa 30646691  T
Q  657 tttgtttttctcttgttgcaccaaggttaactctttcaattgttcaagctcttgctccttgaattgtttgaattcaacccactcctttt 745  Q
     |||||||| | ||||| ||||||||||||||||||||||||||||| |||||||||||| |||| |||||||| ||||||||||||||    
T  30646690 cttgtttttatgttgtttcaccaaggttaactctttcaattgttcaatctcttgctcctttaattctttgaattgaacccactcctttt 30646602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 415 - 745
Target Start/End: Complemental strand, 32974426 - 32974095
Alignment:
Q  415 gataattattaaagcaaacactacagacttgacaccattgacaattattaaagcaaacagtggggactaaacaacacagacaattttgatcgaatacnnn 514  Q
    |||||||||||||||||||||||| |||| |||| || |||||| |||||||||||| ||| ||||||| ||||||| || ||| ||||  ||||||       
T  32974426 gataattattaaagcaaacactacggactagacaacactgacaaatattaaagcaaatagtcgggactagacaacactgataatgttgactgaatacaaa 32974327  T
Q  515 nnnntatttgattgaaattaattttcaaacagctcaagctccaacttttccaacagctctttcttccggtcatcgagatgctcttcagaac-taacttta 613  Q
        ||||||||| |||||||||||||||||||||| ||||||||||  |||||||||| ||||||||||||||||||||||||||    | ||||||||    
T  32974326 caaatatttgattaaaattaattttcaaacagctcacgctccaacttccccaacagctcattcttccggtcatcgagatgctcttcgtcccttaacttta 32974227  T
Q  614 gatagagtttcattttcttagcttcagtcttttctttcatcaatttgtttttctcttgttgcaccaaggttaactctttcaattgttcaagctcttgctc 713  Q
    |||| | ||||||||| ||||||| ||||||||||| || ||| |||||||||| ||||| |||||| |||||||||||||||||||||| |||||||||    
T  32974226 gatacattttcatttttttagcttgagtcttttcttgcagcaacttgtttttctgttgtttcaccaaagttaactctttcaattgttcaatctcttgctc 32974127  T
Q  714 cttgaattgtttgaattcaacccactcctttt 745  Q
     || |||| |||||||| |||||| |||||||    
T  32974126 ttttaattctttgaattgaacccattcctttt 32974095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 415 - 749
Target Start/End: Original strand, 40890792 - 40891127
Alignment:
Q  415 gataattattaaagcaaacactacagacttgacaccattgacaattattaaagcaaacagtggggactaaacaacacagacaattttgatcgaatacnnn 514  Q
    ||||||||||||| |||||||||| |||| |||| || |||||| ||||||||||||||||  |||||| ||||||| || ||| ||||  ||||||       
T  40890792 gataattattaaaccaaacactacggactagacaacactgacaaatattaaagcaaacagtcaggactagacaacactgataatgttgactgaatacaaa 40890891  T
Q  515 nnnntatttgattgaaattaattttcaaacagctcaagctccaacttttccaacagctctttcttccggtcatcgagatgctcttcagaac-taacttta 613  Q
        ||||||||| |||||||||||||||||||||| ||||||||||  |||||||||| ||||||||||||||||||||||||||    | ||||||||    
T  40890892 caaatatttgattaaaattaattttcaaacagctcacgctccaacttccccaacagctcattcttccggtcatcgagatgctcttcgtcccttaacttta 40890991  T
Q  614 gatagagtttcattttcttagcttcagtcttttctttcatcaatttgtttttctcttgttgcaccaaggttaactctttcaattgttcaagctcttgctc 713  Q
    |||| | ||||||||| ||||||| ||||||||||| || ||| |||||||||| ||||| |||||| |||||||||||||||||||||| |||||||||    
T  40890992 gatacattttcatttttttagcttgagtcttttcttgcagcaacttgtttttctgttgtttcaccaaagttaactctttcaattgttcaatctcttgctc 40891091  T
Q  714 cttgaattgtttgaattcaacccactcctttttcac 749  Q
     || |||| |||||||| |||||| |||||||||||    
T  40891092 ttttaattctttgaattgaacccattcctttttcac 40891127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 415 - 745
Target Start/End: Original strand, 4579074 - 4579405
Alignment:
Q  415 gataattattaaagcaaacactacagacttgacaccattgacaattattaaagcaaacagtggggactaaacaacacagacaattttgatcgaatacnnn 514  Q
    |||||||||||||||||||||||| |||| |||| || |||||| |||||||||||||||| ||||||| ||||||| || ||| ||||  ||||||       
T  4579074 gataattattaaagcaaacactacggactagacaacactgacaaatattaaagcaaacagtcgggactagacaacactgataatgttgactgaatacaaa 4579173  T
Q  515 nnnntatttgattgaaattaattttcaaacagctcaagctccaacttttccaacagctctttcttccggtcatcgagatgctcttcagaac-taacttta 613  Q
        ||||||||| |||||||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||||||||||    | ||||||||    
T  4579174 caaatatttgattaaaattaattttcaaacagctcacgctccaacttctccaacagctccttcttccggtcatcgagatgctcttcgtcccttaacttta 4579273  T
Q  614 gatagagtttcattttcttagcttcagtcttttctttcatcaatttgtttttctcttgttgcaccaaggttaactctttcaattgttcaagctcttgctc 713  Q
    |||| | ||||||||| ||||||| ||||||||||| || ||| |||||||| | ||||| ||||||  ||||||||||||||||||||| |||||||||    
T  4579274 gatacattttcatttttttagcttgagtcttttcttgcagcaacttgtttttatgttgtttcaccaaatttaactctttcaattgttcaatctcttgctc 4579373  T
Q  714 cttgaattgtttgaattcaacccactcctttt 745  Q
     || |||| |||||||| ||| || |||||||    
T  4579374 ttttaattctttgaattgaactcattcctttt 4579405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 143; E-Value: 1e-74
Query Start/End: Original strand, 415 - 745
Target Start/End: Original strand, 27944621 - 27944952
Alignment:
Q  415 gataattattaaagcaaacactacagacttgacaccattgacaattattaaagcaaacagtggggactaaacaacacagacaattttgatcgaatacnnn 514  Q
    |||||||||||||||||||||||| |||| |||| || |||||| |||||||||||||||| || |||| ||| ||| || ||| ||||  ||||||       
T  27944621 gataattattaaagcaaacactacggactagacaacactgacaaatattaaagcaaacagtcggaactagacagcactgataatgttgactgaatacaaa 27944720  T
Q  515 nnnntatttgattgaaattaattttcaaacagctcaagctccaacttttccaacagctctttcttccggtcatcgagatgctcttcagaac-taacttta 613  Q
        ||||||||| |||||||||||||||||||||| ||||||||||  |||||||||| ||||||||||||||||||||||||||    | ||||||||    
T  27944721 caaatatttgattaaaattaattttcaaacagctcacgctccaacttccccaacagctcattcttccggtcatcgagatgctcttcgtcccttaacttta 27944820  T
Q  614 gatagagtttcattttcttagcttcagtcttttctttcatcaatttgtttttctcttgttgcaccaaggttaactctttcaattgttcaagctcttgctc 713  Q
    |||| | ||||||||| ||||||| | ||||||||| || ||| |||||||||| ||||| |||||| |||||||||||||||||||||| |||||||||    
T  27944821 gatacattttcatttttttagcttgaatcttttcttgcagcaacttgtttttctgttgtttcaccaaagttaactctttcaattgttcaatctcttgctc 27944920  T
Q  714 cttgaattgtttgaattcaacccactcctttt 745  Q
     || |||| |||||||| |||||| |||||||    
T  27944921 ttttaattctttgaattgaacccattcctttt 27944952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 174 - 365
Target Start/End: Complemental strand, 9273636 - 9273433
Alignment:
Q  174 atattggaagtagat-tgaatgaaatttgtgatattggaagtggatatgaatgagatttgtgatattgaaagtagatatgagtccctat----------- 261  Q
    ||||||||||||||| | ||||| |||||||| ||||||||| ||||  |||||||||||||| |||| ||||| |||||||||| |||               
T  9273636 atattggaagtagatataaatgagatttgtgaaattggaagtagataaaaatgagatttgtgaaattggaagtatatatgagtccttatataagtacatt 9273537  T
Q  262 gtgtggtggacactgacgcattcaaaataagttattgtattgtattaaagcaaacggttgagataattattaaagcaaatagtatgtgaaataatggtca 361  Q
    ||||||| |||||||||| |||| ||| ||||||||||||||||||||||||||| || | |||||||||||||||||||||||||||||||||||| ||    
T  9273536 gtgtggttgacactgacgaattcgaaaaaagttattgtattgtattaaagcaaacagtggggataattattaaagcaaatagtatgtgaaataatggaca 9273437  T
Q  362 caca 365  Q
    ||||    
T  9273436 caca 9273433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 360 - 491
Target Start/End: Complemental strand, 27406435 - 27406302
Alignment:
Q  360 cacacattccaacgaatggaggaagaccttcaaatagtatgtgaaataa--gtcacggataattattaaagcaaacactacagacttgacaccattgaca 457  Q
    |||||||||||||||||||||||||||||||||||||| | ||||||||  |||||||||||||  ||||||||||||||  |||| |||| || |||||    
T  27406435 cacacattccaacgaatggaggaagaccttcaaatagtgtttgaaataaaagtcacggataattggtaaagcaaacactagggactagacaacactgaca 27406336  T
Q  458 attattaaagcaaacagtggggactaaacaacac 491  Q
    ||||||||||||||||   ||||||| |||||||    
T  27406335 attattaaagcaaacaccagggactagacaacac 27406302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 174 - 340
Target Start/End: Original strand, 27944176 - 27944353
Alignment:
Q  174 atattggaagtagattg-aatgaaatttgtgatattggaagtggatatgaatgagatttgtgatattgaaagtagatatgagtcccta------------ 260  Q
    ||||||||| ||||| | ||||| |||||||||||||||| | |||| |||||||||||||||||||| ||||||| |||||||||||                
T  27944176 atattggaaatagataggaatgagatttgtgatattggaaatagataggaatgagatttgtgatattggaagtagacatgagtccctatatataagtaca 27944275  T
Q  261 -tgtgtggtggacactgacgcattcaaaataagttattgtattgtattaaagcaaacggttgagataattattaaagcaaa 340  Q
     ||||||||||||||||||| |||| |||||||||||||||||||||||||||||||  |   ||||||||||||||||||    
T  27944276 ttgtgtggtggacactgacggattcgaaataagttattgtattgtattaaagcaaacact---gataattattaaagcaaa 27944353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 174 - 340
Target Start/End: Complemental strand, 32974955 - 32974778
Alignment:
Q  174 atattggaagtagattg-aatgaaatttgtgatattggaagtggatatgaatgagatttgtgatattgaaagtagatatgagtcccta------------ 260  Q
    ||||||||| ||||| | ||||| |||||||||||||||| | |||| |||||||||||||||||||| ||||||| |||||||||||                
T  32974955 atattggaaatagataggaatgagatttgtgatattggaaatagataggaatgagatttgtgatattggaagtagacatgagtccctatatataagtaca 32974856  T
Q  261 -tgtgtggtggacactgacgcattcaaaataagttattgtattgtattaaagcaaacggttgagataattattaaagcaaa 340  Q
     ||||||||||||||||||| |||| |||||||||||||||||||||||||||||||  |   ||||||||||||||||||    
T  32974855 ttgtgtggtggacactgacggattcgaaataagttattgtattgtattaaagcaaacact---gataattattaaagcaaa 32974778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 192 - 340
Target Start/End: Complemental strand, 29617943 - 29617785
Alignment:
Q  192 atgaaatttgtgatattggaagtggatatgaatgagatttgtgatattgaaagtagatatgagtcccta-------------tgtgtggtggacactgac 278  Q
    |||| |||||||||||||||| | |||| |||||||||||||||||||| |||||||||||||||| ||             ||||||||||||||| ||    
T  29617943 atgagatttgtgatattggaaatagataggaatgagatttgtgatattggaagtagatatgagtccttatatataagtacattgtgtggtggacactaac 29617844  T
Q  279 gcattcaaaataagttattgtattgtattaaagcaaacggttgagataattattaaagcaaa 340  Q
    | |||| |||||||||||||||||||||||||||||||  |   ||||||||||||||||||    
T  29617843 ggattcgaaataagttattgtattgtattaaagcaaacact---gataattattaaagcaaa 29617785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 654 - 745
Target Start/End: Original strand, 34710303 - 34710394
Alignment:
Q  654 caatttgtttttctcttgttgcaccaaggttaactctttcaattgttcaagctcttgctccttgaattgtttgaattcaacccactcctttt 745  Q
    |||| |||||||||| |||||||||||||| |||||||||||||| |||| ||||||| |||||| || |||||||||||||||||||||||    
T  34710303 caatctgtttttctcctgttgcaccaaggtgaactctttcaattgctcaatctcttgcaccttgatttctttgaattcaacccactcctttt 34710394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 201 - 340
Target Start/End: Original strand, 40890578 - 40890727
Alignment:
Q  201 gtgatattggaagtggatatgaatgagatttgtgatattgaaagtagatatgagtccctat-------------gtgtggtggacactgacgcattcaaa 287  Q
    |||||||||||| | |||| |||||||||||||||||||  ||||||| ||||||||||||             |||||||||||||||||| |||| ||    
T  40890578 gtgatattggaaatagataggaatgagatttgtgatattagaagtagacatgagtccctatatataagtacattgtgtggtggacactgacggattcgaa 40890677  T
Q  288 ataagttattgtattgtattaaagcaaacggttgagataattattaaagcaaa 340  Q
    |||||||||||||||||||||||||||||  |   ||||||||||||||||||    
T  40890678 ataagttattgtattgtattaaagcaaacact---gataattattaaagcaaa 40890727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 415 - 491
Target Start/End: Original strand, 27944459 - 27944535
Alignment:
Q  415 gataattattaaagcaaacactacagacttgacaccattgacaattattaaagcaaacagtggggactaaacaacac 491  Q
    |||||||||||||||||||||||| |||| |||| || |||||| ||||||||||||||||| |||||| |||||||    
T  27944459 gataattattaaagcaaacactacggactagacaacactgacaaatattaaagcaaacagtgaggactagacaacac 27944535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 176 - 261
Target Start/End: Original strand, 4578703 - 4578789
Alignment:
Q  176 attggaagtagat-tgaatgaaatttgtgatattggaagtggatatgaatgagatttgtgatattgaaagtagatatgagtccctat 261  Q
    |||| |||||||| ||||||| |||||||| ||||||||| ||| | ||||||| |||||| |||||||||||||||||||||||||    
T  4578703 attgaaagtagatatgaatgagatttgtgaaattggaagtagattttaatgagacttgtgaaattgaaagtagatatgagtccctat 4578789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 415 - 488
Target Start/End: Original strand, 4578953 - 4579026
Alignment:
Q  415 gataattattaaagcaaacactacagacttgacaccattgacaattattaaagcaaacagtggggactaaacaa 488  Q
    |||||||||||||||||||||||| |||| |||| || |||||| |||||||||||||| ||||||||| ||||    
T  4578953 gataattattaaagcaaacactacggactagacaacactgacaaatattaaagcaaacattggggactagacaa 4579026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 177 - 249
Target Start/End: Original strand, 4578673 - 4578746
Alignment:
Q  177 ttggaagtagat-tgaatgaaatttgtgatattggaagtggatatgaatgagatttgtgatattgaaagtagat 249  Q
    ||||||| |||| ||||||| |||||||| |||| |||| |||||||||||||||||||| |||| ||||||||    
T  4578673 ttggaagaagatatgaatgagatttgtgaaattgaaagtagatatgaatgagatttgtgaaattggaagtagat 4578746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 198 - 250
Target Start/End: Complemental strand, 9273642 - 9273590
Alignment:
Q  198 tttgtgatattggaagtggatatgaatgagatttgtgatattgaaagtagata 250  Q
    ||||||||||||||||| ||||| |||||||||||||| |||| |||||||||    
T  9273642 tttgtgatattggaagtagatataaatgagatttgtgaaattggaagtagata 9273590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 207 - 253
Target Start/End: Original strand, 4578673 - 4578719
Alignment:
Q  207 ttggaagtggatatgaatgagatttgtgatattgaaagtagatatga 253  Q
    |||||||  |||||||||||||||||||| |||||||||||||||||    
T  4578673 ttggaagaagatatgaatgagatttgtgaaattgaaagtagatatga 4578719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 415 - 497
Target Start/End: Complemental strand, 32974467 - 32974383
Alignment:
Q  415 gataattattaaagcaaacactacagacttgacacca--ttgacaattattaaagcaaacagtggggactaaacaacacagacaa 497  Q
    |||||||||||||||||||||||| |||| |||| ||   ||| ||||||||||||||||| |  |||||| ||||||| |||||    
T  32974467 gataattattaaagcaaacactacggactagacaacactctgataattattaaagcaaacactacggactagacaacactgacaa 32974383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 323 - 357
Target Start/End: Complemental strand, 9273427 - 9273393
Alignment:
Q  323 gataattattaaagcaaatagtatgtgaaataatg 357  Q
    |||||||||||||| ||||||||||||||||||||    
T  9273427 gataattattaaagtaaatagtatgtgaaataatg 9273393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 418 - 479
Target Start/End: Complemental strand, 27406336 - 27406275
Alignment:
Q  418 aattattaaagcaaacactacagacttgacaccattgacaattattaaagcaaacagtgggg 479  Q
    |||||||||||||||||| |  |||| |||| || ||| ||||||||||||||||| |||||    
T  27406336 aattattaaagcaaacaccagggactagacaacactgataattattaaagcaaacactgggg 27406275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 250
Target Start/End: Original strand, 27944173 - 27944222
Alignment:
Q  201 gtgatattggaagtggatatgaatgagatttgtgatattgaaagtagata 250  Q
    |||||||||||| | |||| |||||||||||||||||||| || ||||||    
T  27944173 gtgatattggaaatagataggaatgagatttgtgatattggaaatagata 27944222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 415 - 480
Target Start/End: Complemental strand, 29617764 - 29617699
Alignment:
Q  415 gataattattaaagcaaacactacagacttgacaccattgacaattattaaagcaaacagtgggga 480  Q
    |||||||||||||||||||| |   |||| |||| || ||| ||||||||||||||||||| ||||    
T  29617764 gataattattaaagcaaacagtcgggactagacaacactgataattattaaagcaaacagtcggga 29617699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 250
Target Start/End: Complemental strand, 32974958 - 32974909
Alignment:
Q  201 gtgatattggaagtggatatgaatgagatttgtgatattgaaagtagata 250  Q
    |||||||||||| | |||| |||||||||||||||||||| || ||||||    
T  32974958 gtgatattggaaatagataggaatgagatttgtgatattggaaatagata 32974909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 194; Significance: 1e-105; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 440 - 745
Target Start/End: Original strand, 27359165 - 27359471
Alignment:
Q  440 gacttgacaccattgacaattattaaagcaaacagtggggactaaacaacacagacaattttgatcgaatacnnnnnnntatttgattgaaattaatttt 539  Q
    |||| |||| |||||||||||||||||||||||| |||||| || ||||||   |||||||||| |||||||       ||||||||||||||||||||     
T  27359165 gactagacaacattgacaattattaaagcaaacactggggattagacaacatttacaattttgaccgaatacaaacaaatatttgattgaaattaatttc 27359264  T
Q  540 caaacagctcaagctccaacttttccaacagctctttcttccggtcatcgagatgctcttcagaact-aactttagatagagtttcattttcttagcttc 638  Q
    ||||||||||| |||||||||||||||||| ||||||||| ||| |||||||||||||||| ||||| ||||||||||| | ||||||||||||||||||    
T  27359265 caaacagctcacgctccaacttttccaacaactctttcttacggccatcgagatgctcttcggaacttaactttagatacattttcattttcttagcttc 27359364  T
Q  639 agtcttttctttcatcaatttgtttttctcttgttgcaccaaggttaactctttcaattgttcaagctcttgctccttgaattgtttgaattcaacccac 738  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| |||| ||||||||||||||||    
T  27359365 agtcttttctttcatcaatttgtttttctcttgtttcaccaaggttaactctttcaattgttcaacctcttgctcctttaattctttgaattcaacccac 27359464  T
Q  739 tcctttt 745  Q
    |||||||    
T  27359465 tcctttt 27359471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 440 - 745
Target Start/End: Original strand, 27368522 - 27368828
Alignment:
Q  440 gacttgacaccattgacaattattaaagcaaacagtggggactaaacaacacagacaattttgatcgaatacnnnnnnntatttgattgaaattaatttt 539  Q
    |||| |||| |||||||||||||||||||||||| |||||| || ||||||   |||||||||| |||||||       ||||||||||||||||||||     
T  27368522 gactagacaacattgacaattattaaagcaaacactggggattagacaacatttacaattttgaccgaatacaaacaaatatttgattgaaattaatttc 27368621  T
Q  540 caaacagctcaagctccaacttttccaacagctctttcttccggtcatcgagatgctcttcagaact-aactttagatagagtttcattttcttagcttc 638  Q
    ||||||||||| |||||||||||||||||| ||||||||| ||| |||||||||||||||| ||||| ||||||||||| | ||||||||||||||||||    
T  27368622 caaacagctcacgctccaacttttccaacaactctttcttacggccatcgagatgctcttcggaacttaactttagatacattttcattttcttagcttc 27368721  T
Q  639 agtcttttctttcatcaatttgtttttctcttgttgcaccaaggttaactctttcaattgttcaagctcttgctccttgaattgtttgaattcaacccac 738  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| |||| ||||||||||||||||    
T  27368722 agtcttttctttcatcaatttgtttttctcttgtttcaccaaggttaactctttcaattgttcaaactcttgctcctttaattctttgaattcaacccac 27368821  T
Q  739 tcctttt 745  Q
    |||||||    
T  27368822 tcctttt 27368828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 360 - 745
Target Start/End: Original strand, 15055557 - 15055946
Alignment:
Q  360 cacacattccaacgaatggaggaagaccttcaaatagtatgtgaaataag--tcacggataattattaaagcaaacactacagacttgacaccattgaca 457  Q
    ||||||||||||| |||||||||| || |||||||||| | ||||||||   ||||||||||||  ||||||||||||||  |||| |||| || |||||    
T  15055557 cacacattccaacaaatggaggaacactttcaaatagtgtttgaaataaaaatcacggataattggtaaagcaaacactagggactagacaacactgaca 15055656  T
Q  458 attattaaagcaaacagtggggactaaacaacacagacaattttgatcgaatacnnnnnnntatttgattgaaattaattttcaaacagctcaagctcca 557  Q
    | |||||||||||||||| ||||||| ||||||| || ||||||||  ||||||       ||||||||| |||||||||||||||||||||| ||||||    
T  15055657 aatattaaagcaaacagtcgggactagacaacactgataattttgactgaatacaaacaaatatttgattaaaattaattttcaaacagctcacgctcca 15055756  T
Q  558 acttttccaacagctctttcttccggtcatcgagatgctcttcagaac-taactttagatagagtttcattttcttagcttcagtc-ttttctttcatca 655  Q
    ||||  |||||||||| |||||||||||||||||||||||||| |||| |||||||||||| | ||||||||||||||||| |||| ||||||| || ||    
T  15055757 acttccccaacagctccttcttccggtcatcgagatgctcttcggaacttaactttagatacattttcattttcttagcttgagtctttttcttgcagca 15055856  T
Q  656 atttgtttttctcttgttgcaccaaggttaactctttcaattgttcaagctcttgctccttgaattgtttgaattcaacccactcctttt 745  Q
    | |||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||| |||| |||||||| ||||||||| ||||    
T  15055857 acttgtttttctgttgtttcaccaaggttaactctttcaattgttcaatctcttgctcctttaattctttgaattgaacccactcatttt 15055946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 155; E-Value: 7e-82
Query Start/End: Original strand, 415 - 745
Target Start/End: Complemental strand, 1956355 - 1956024
Alignment:
Q  415 gataattattaaagcaaacactacagacttgacaccattgacaattattaaagcaaacagtggggactaaacaacacagacaattttgatcgaatacnnn 514  Q
    |||||||||||||||||||||||| |||| |||| || |||||| |||||||||||||||| ||||||| ||||||| || ||| ||||  ||||||       
T  1956355 gataattattaaagcaaacactacggactagacaacactgacaaatattaaagcaaacagtcgggactagacaacactgataatgttgactgaatacaaa 1956256  T
Q  515 nnnntatttgattgaaattaattttcaaacagctcaagctccaacttttccaacagctctttcttccggtcatcgagatgctcttcagaac-taacttta 613  Q
        ||||||||| |||||||||||||||||||||| ||||||||||  |||||||||| ||||||||||||||||||||||||||    | ||||||||    
T  1956255 caaatatttgattaaaattaattttcaaacagctcacgctccaacttccccaacagctcattcttccggtcatcgagatgctcttcgtcccttaacttta 1956156  T
Q  614 gatagagtttcattttcttagcttcagtcttttctttcatcaatttgtttttctcttgttgcaccaaggttaactctttcaattgttcaagctcttgctc 713  Q
    |||| | ||||||||| ||||||| ||||||||||| || ||| |||||||||| ||||| |||||| |||||||||||||||||||||| |||||||||    
T  1956155 gatacattttcatttttttagcttgagtcttttcttgcagcaacttgtttttctgttgtttcaccaaagttaactctttcaattgttcaatctcttgctc 1956056  T
Q  714 cttgaattgtttgaattcaacccactcctttt 745  Q
     || |||| |||||||| |||||| |||||||    
T  1956055 ttttaattctttgaattgaacccattcctttt 1956024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 440 - 745
Target Start/End: Complemental strand, 30530654 - 30530369
Alignment:
Q  440 gacttgacaccattgacaattattaaagcaaacagtggggactaaacaacacagacaattttgatcgaatacnnnnnnntatttgattgaaattaatttt 539  Q
    |||| |||| || ||||||||||||||| ||||  | ||||||| ||||||| ||||||||||| |||||||       ||||||||||||||||||||     
T  30530654 gactagacaacactgacaattattaaagtaaacgctcgggactagacaacactgacaattttgaccgaatacaaacaaatatttgattgaaattaatttc 30530555  T
Q  540 caaacagctcaagctccaacttttccaacagctctttcttccggtcatcgagatgctcttcagaac-taactttagatagagtttcattttcttagcttc 638  Q
     |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||  |||| |||||||| ||| | |||||||||||           
T  30530554 aaaacagctcacgctccaacttttccaacagctcttttttccggtcatcgagatgctctttggaacttaactttacatacaatttcattttct------- 30530462  T
Q  639 agtcttttctttcatcaatttgtttttctcttgttgcaccaaggttaactctttcaattgttcaagctcttgctccttgaattgtttgaattcaacccac 738  Q
                  ||||| |||||||||| |||| ||||||||| ||||||||||||||||||| ||||||  |||||| |||||||||||||||||||    
T  30530461 --------------tcaatctgtttttctcctgttacaccaaggtgaactctttcaattgttcaatctcttgtaccttgatttgtttgaattcaacccac 30530376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 440 - 632
Target Start/End: Original strand, 17743684 - 17743877
Alignment:
Q  440 gacttgacaccattgacaattattaaagcaaacagtggggactaaacaacacagacaattttgatcgaatacnnnnnnntatttgattgaaattaatttt 539  Q
    |||| |||| |||||||||||||||||||||||| ||||||||| ||||||| ||||||| | | |||||||       || |||||||||||||||||     
T  17743684 gactagacaacattgacaattattaaagcaaacactggggactagacaacactgacaattattaccgaatacaaacaaatagttgattgaaattaatttg 17743783  T
Q  540 caaacagctcaagctccaacttttccaacagctctttcttccggtcatcgagatgctcttcagaac-taactttagatagagtttcattttctt 632  Q
    ||||||||||| ||||||| |||||||||  |||||| ||||||||||||||||||||||| |||| |||||||| ||| | ||||||||||||    
T  17743784 caaacagctcacgctccaagttttccaacgtctcttttttccggtcatcgagatgctcttcggaacttaactttacatacaatttcattttctt 17743877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 207 - 365
Target Start/End: Complemental strand, 30530939 - 30530780
Alignment:
Q  207 ttggaagtggatatgaatgagatttgtgatattgaaagtagatatgagtccctatgtgtggtggacactg--acgcattcaaaataagttattgtattgt 304  Q
    |||||||| ||||||||||| |||||||| |||| |||||||||||||||||||| | |   | ||| ||  ||| |||| ||||||||||||||| |||    
T  30530939 ttggaagtagatatgaatgaaatttgtgaaattggaagtagatatgagtccctatatataa-gtacattgtaacggattcgaaataagttattgtactgt 30530841  T
Q  305 attaaagcaaacggttgagataattattaaagcaaatagtatgtgaaataatggtcacaca 365  Q
    |||||||||||| || ||||||||||||||| |||||||||||||||||||||| ||||||    
T  30530840 attaaagcaaaccgtggagataattattaaaacaaatagtatgtgaaataatgggcacaca 30530780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 201 - 340
Target Start/End: Complemental strand, 1956611 - 1956462
Alignment:
Q  201 gtgatattggaagtggatatgaatgagatttgtgatattgaaagtagatatgagtccctat-------------gtgtggtggacactgacgcattcaaa 287  Q
    |||||||||||| | |||| |||||||||||||||||||| ||||||| ||||||||||||             ||||||||||||| |||| |||| ||    
T  1956611 gtgatattggaaatagataggaatgagatttgtgatattggaagtagacatgagtccctatatataagtacattgtgtggtggacacggacggattcgaa 1956512  T
Q  288 ataagttattgtattgtattaaagcaaacggttgagataattattaaagcaaa 340  Q
    |||||||||||||||||||||||||||||  |   ||||||||||||||||||    
T  1956511 ataagttattgtattgtattaaagcaaacact---gataattattaaagcaaa 1956462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 174 - 261
Target Start/End: Original strand, 15055317 - 15055405
Alignment:
Q  174 atattggaagtagattg-aatgaaatttgtgatattggaagtggatatgaatgagatttgtgatattgaaagtagatatgagtccctat 261  Q
    ||||||||||||||| | |||||  ||||||||||||||| | |||| |||||||||||||||||||| || |||||||||||||||||    
T  15055317 atattggaagtagataggaatgaggtttgtgatattggaaatagataggaatgagatttgtgatattggaaatagatatgagtccctat 15055405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 177 - 261
Target Start/End: Original strand, 17743365 - 17743450
Alignment:
Q  177 ttggaagtagattgaat-gaaatttgtgatattggaagtggatatgaatgagatttgtgatattgaaagtagatatgagtccctat 261  Q
    ||||||||||||||||| |   ||||||||||||||||| ||||| |||||||||||||| |||| ||||||||||| ||||||||    
T  17743365 ttggaagtagattgaatagttttttgtgatattggaagtagatataaatgagatttgtgaaattggaagtagatatgtgtccctat 17743450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 653 - 745
Target Start/End: Original strand, 17743877 - 17743969
Alignment:
Q  653 tcaatttgtttttctcttgttgcaccaaggttaactctttcaattgttcaagctcttgctccttgaattgtttgaattcaacccactcctttt 745  Q
    ||||| |||||||||| | ||||||   ||| ||||||||||||| ||||| ||||||| |||||| || ||||||||||| |||||||||||    
T  17743877 tcaatctgtttttctcctattgcactgcggtgaactctttcaatttttcaatctcttgcaccttgatttctttgaattcaatccactcctttt 17743969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 324 - 358
Target Start/End: Complemental strand, 30530773 - 30530739
Alignment:
Q  324 ataattattaaagcaaatagtatgtgaaataatgg 358  Q
    |||||||||||||||||||||||||||||||||||    
T  30530773 ataattattaaagcaaatagtatgtgaaataatgg 30530739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 324 - 355
Target Start/End: Original strand, 17743592 - 17743623
Alignment:
Q  324 ataattattaaagcaaatagtatgtgaaataa 355  Q
    ||||||||||||||||||||||||||||||||    
T  17743592 ataattattaaagcaaatagtatgtgaaataa 17743623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 177 - 222
Target Start/End: Complemental strand, 30530939 - 30530893
Alignment:
Q  177 ttggaagtagat-tgaatgaaatttgtgatattggaagtggatatga 222  Q
    |||||||||||| |||||||||||||||| ||||||||| |||||||    
T  30530939 ttggaagtagatatgaatgaaatttgtgaaattggaagtagatatga 30530893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 250
Target Start/End: Original strand, 15055314 - 15055363
Alignment:
Q  201 gtgatattggaagtggatatgaatgagatttgtgatattgaaagtagata 250  Q
    |||||||||||||| |||| ||||||| |||||||||||| || ||||||    
T  15055314 gtgatattggaagtagataggaatgaggtttgtgatattggaaatagata 15055363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 324 - 365
Target Start/End: Original strand, 17743544 - 17743585
Alignment:
Q  324 ataattattaaagcaaatagtatgtgaaataatggtcacaca 365  Q
    |||||||||||||||||| |||||||| ||||||| ||||||    
T  17743544 ataattattaaagcaaattgtatgtgacataatgggcacaca 17743585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 192; Significance: 1e-104; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 361 - 745
Target Start/End: Complemental strand, 16172979 - 16172592
Alignment:
Q  361 acacattccaacgaatggaggaagaccttcaaatagtatgtgaaataa--gtcacggataattattaaagcaaacactacagacttgacaccattgacaa 458  Q
    |||||||||||| |||||||||||||||||||||||| | ||||||||  |||||||||||||  ||||||||||||||  |||| | || || ||||||    
T  16172979 acacattccaacaaatggaggaagaccttcaaatagtgtttgaaataaaagtcacggataattggtaaagcaaacactagggactaggcaacactgacaa 16172880  T
Q  459 ttattaaagcaaacagtggggactaaacaacacagacaattttgatcgaatacnnnnnnntatttgattgaaattaattttcaaacagctcaagctccaa 558  Q
     |||||||||||||| | ||||||| | ||||| || ||||||||  ||||||       ||||||||| |||||||||| ||||||||||| |||||||    
T  16172879 atattaaagcaaacactcgggactagataacactgataattttgactgaatacaaacaaatatttgattaaaattaatttccaaacagctcacgctccaa 16172780  T
Q  559 cttttccaacagctctttcttccggtcatcgagatgctcttcagaact-aactttagatagagtttcattttcttagcttcagtcttttctttcatcaat 657  Q
    |||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| | ||||||||||||||||||||||||||||| || ||      
T  16172779 ctttcccaacagctctttcttccggtcatcgagatgctcttcggaacttaactttagatacattttcattttcttagcttcagtcttttcttgcagcagc 16172680  T
Q  658 ttgtttttctcttgttgcaccaaggttaactctttcaattgttcaagctcttgctccttgaattgtttgaattcaacccactcctttt 745  Q
    |||||||||| || || |||||| |||||||||||||||||||||| |||||||||||| |||| |||||||| ||||||||||||||    
T  16172679 ttgtttttctgttatttcaccaaagttaactctttcaattgttcaatctcttgctcctttaattctttgaattgaacccactcctttt 16172592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 155; E-Value: 7e-82
Query Start/End: Original strand, 415 - 745
Target Start/End: Original strand, 8993753 - 8994084
Alignment:
Q  415 gataattattaaagcaaacactacagacttgacaccattgacaattattaaagcaaacagtggggactaaacaacacagacaattttgatcgaatacnnn 514  Q
    |||||||||||||||||||||||| |||| |||| || |||||| |||||||||||||||| ||||||| ||||||| || ||| ||||  ||||||       
T  8993753 gataattattaaagcaaacactacggactagacaacactgacaaatattaaagcaaacagtcgggactagacaacactgataatgttgactgaatacaaa 8993852  T
Q  515 nnnntatttgattgaaattaattttcaaacagctcaagctccaacttttccaacagctctttcttccggtcatcgagatgctcttcagaac-taacttta 613  Q
        ||||||||| |||||||||||||||||||||| ||||||||||  |||||||||| ||||||||||||||||||||||||||    | ||||||||    
T  8993853 caaatatttgattaaaattaattttcaaacagctcacgctccaacttccccaacagctcattcttccggtcatcgagatgctcttcgtcccttaacttta 8993952  T
Q  614 gatagagtttcattttcttagcttcagtcttttctttcatcaatttgtttttctcttgttgcaccaaggttaactctttcaattgttcaagctcttgctc 713  Q
    |||| | ||||||||| ||||||| ||||||||||| || ||| |||||||||| ||||| |||||| |||||||||||||||||||||| |||||||||    
T  8993953 gatacattttcatttttttagcttgagtcttttcttgcagcaacttgtttttctgttgtttcaccaaagttaactctttcaattgttcaatctcttgctc 8994052  T
Q  714 cttgaattgtttgaattcaacccactcctttt 745  Q
     || |||| |||||||| |||||| |||||||    
T  8994053 ttttaattctttgaattgaacccattcctttt 8994084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 155; E-Value: 7e-82
Query Start/End: Original strand, 415 - 745
Target Start/End: Original strand, 13112531 - 13112862
Alignment:
Q  415 gataattattaaagcaaacactacagacttgacaccattgacaattattaaagcaaacagtggggactaaacaacacagacaattttgatcgaatacnnn 514  Q
    |||||||||||||||||||||||| |||| |||| || |||||| |||||||||||||||| ||||||| ||||||| || ||| ||||  ||||||       
T  13112531 gataattattaaagcaaacactacggactagacaacactgacaaatattaaagcaaacagtcgggactagacaacactgataatgttgactgaatacaaa 13112630  T
Q  515 nnnntatttgattgaaattaattttcaaacagctcaagctccaacttttccaacagctctttcttccggtcatcgagatgctcttcagaac-taacttta 613  Q
        ||||||||| |||||||||||||||||||||| ||||||||||  |||||||||| ||||||||||||||||||||||||||    | ||||||||    
T  13112631 caaatatttgattaaaattaattttcaaacagctcacgctccaacttccccaacagctcattcttccggtcatcgagatgctcttcgtcccttaacttta 13112730  T
Q  614 gatagagtttcattttcttagcttcagtcttttctttcatcaatttgtttttctcttgttgcaccaaggttaactctttcaattgttcaagctcttgctc 713  Q
    |||| | ||||||||| ||||||| ||||||||||| || ||| |||||||||| ||||| |||||| |||||||||||||||||||||| |||||||||    
T  13112731 gatacattttcatttttttagcttgagtcttttcttgcagcaacttgtttttctgttgtttcaccaaagttaactctttcaattgttcaatctcttgctc 13112830  T
Q  714 cttgaattgtttgaattcaacccactcctttt 745  Q
     || |||| |||||||| |||||| |||||||    
T  13112831 ttttaattctttgaattgaacccattcctttt 13112862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 155; E-Value: 7e-82
Query Start/End: Original strand, 415 - 745
Target Start/End: Complemental strand, 46915545 - 46915214
Alignment:
Q  415 gataattattaaagcaaacactacagacttgacaccattgacaattattaaagcaaacagtggggactaaacaacacagacaattttgatcgaatacnnn 514  Q
    |||||||||||||||||||||||| |||| |||| || |||||| |||||||||||||||| ||||||| ||||||| || ||| ||||  ||||||       
T  46915545 gataattattaaagcaaacactacggactagacaacactgacaaatattaaagcaaacagtcgggactagacaacactgataatgttgactgaatacaaa 46915446  T
Q  515 nnnntatttgattgaaattaattttcaaacagctcaagctccaacttttccaacagctctttcttccggtcatcgagatgctcttcagaac-taacttta 613  Q
        ||||||||| |||||||||||||||||||||| |||||||||| ||||||||||| |||||||||||||||| |||||||||    | ||||||||    
T  46915445 caaatatttgattaaaattaattttcaaacagctcacgctccaacttctccaacagctccttcttccggtcatcgacatgctcttcgtcccttaacttta 46915346  T
Q  614 gatagagtttcattttcttagcttcagtcttttctttcatcaatttgtttttctcttgttgcaccaaggttaactctttcaattgttcaagctcttgctc 713  Q
    |||| | ||||||||| ||||||| ||||||||||| || ||| |||||||||| ||||| |||||| |||||||||||||||||||||| |||||||||    
T  46915345 gatacattttcatttttttagcttgagtcttttcttgcagcaacttgtttttctgttgtttcaccaaagttaactctttcaattgttcaatctcttgctc 46915246  T
Q  714 cttgaattgtttgaattcaacccactcctttt 745  Q
     || |||| |||||||| |||||| |||||||    
T  46915245 ttttaattctttgaattgaacccattcctttt 46915214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 415 - 745
Target Start/End: Complemental strand, 3616320 - 3615989
Alignment:
Q  415 gataattattaaagcaaacactacagacttgacaccattgacaattattaaagcaaacagtggggactaaacaacacagacaattttgatcgaatacnnn 514  Q
    |||||||||||||||||||||||| |||| |||| || |||||| |||||||||||||||| ||||||| ||||||| || ||| ||||  ||||||       
T  3616320 gataattattaaagcaaacactacggactagacaacactgacaaatattaaagcaaacagttgggactagacaacactgataatgttgactgaatacaaa 3616221  T
Q  515 nnnntatttgattgaaattaattttcaaacagctcaagctccaacttttccaacagctctttcttccggtcatcgagatgctcttcagaac-taacttta 613  Q
        ||||||||| ||||||||||||||||| |||| ||||||||||  |||||||||| ||||||||||||||||||||||||||    | ||||||||    
T  3616220 caaatatttgattaaaattaattttcaaacaactcacgctccaacttccccaacagctcattcttccggtcatcgagatgctcttcgtcccttaacttta 3616121  T
Q  614 gatagagtttcattttcttagcttcagtcttttctttcatcaatttgtttttctcttgttgcaccaaggttaactctttcaattgttcaagctcttgctc 713  Q
    |||| | ||||||||| ||||||| ||||||||||| || ||| |||||||||| ||||| |||||| |||||||||||||||||||||| |||||||||    
T  3616120 gatacattttcatttttttagcttgagtcttttcttgcagcaacttgtttttctgttgtttcaccaaagttaactctttcaattgttcaatctcttgctc 3616021  T
Q  714 cttgaattgtttgaattcaacccactcctttt 745  Q
     || |||| |||||||| |||||| |||||||    
T  3616020 ttttaattctttgaattgaacccattcctttt 3615989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 149; E-Value: 3e-78
Query Start/End: Original strand, 415 - 745
Target Start/End: Complemental strand, 3531331 - 3531000
Alignment:
Q  415 gataattattaaagcaaacactacagacttgacaccattgacaattattaaagcaaacagtggggactaaacaacacagacaattttgatcgaatacnnn 514  Q
    |||||||||||||||||||||||| |||| |||| || |||||| |||||||||||||||| | ||||| ||||||| || ||| ||||  ||||||       
T  3531331 gataattattaaagcaaacactacggactagacaacactgacaaatattaaagcaaacagtcgagactagacaacactgataatgttgactgaatacaaa 3531232  T
Q  515 nnnntatttgattgaaattaattttcaaacagctcaagctccaacttttccaacagctctttcttccggtcatcgagatgctcttcagaac--taacttt 612  Q
        ||||||||| |||||||||||||||||||||| ||||||||||  |||||||||| |||||||||||||||||||||||||| |  |  |||||||    
T  3531231 caaatatttgattaaaattaattttcaaacagctcatgctccaacttccccaacagctcattcttccggtcatcgagatgctcttc-gtcctttaacttt 3531133  T
Q  613 agatagagtttcattttcttagcttcagtcttttctttcatcaatttgtttttctcttgttgcaccaaggttaactctttcaattgttcaagctcttgct 712  Q
    ||||| | ||||||||| ||||||| ||||||||||| || ||| |||||||||| ||||| |||||| |||||||||||||||||||||| ||||||||    
T  3531132 agatacattttcatttttttagcttgagtcttttcttgcagcaacttgtttttctgttgtttcaccaaagttaactctttcaattgttcaatctcttgct 3531033  T
Q  713 ccttgaattgtttgaattcaacccactcctttt 745  Q
    | || |||| |||||||| |||||| |||||||    
T  3531032 cttttaattctttgaattgaacccattcctttt 3531000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 146; E-Value: 2e-76
Query Start/End: Original strand, 416 - 745
Target Start/End: Complemental strand, 2213349 - 2213020
Alignment:
Q  416 ataattattaaagcaaacactacagacttgacaccattgacaattattaaagcaaacagtggggactaaacaacacagacaattttgatcgaatacnnnn 515  Q
    ||||||||||||||||||||||| |||| |||| ||| ||||| |||||||||||||||| ||||||| ||||||| || ||| ||||  ||||||        
T  2213349 ataattattaaagcaaacactacggactagacaacat-gacaaatattaaagcaaacagtcgggactagacaacactgataatgttgactgaatacaaac 2213251  T
Q  516 nnntatttgattgaaattaattttcaaacagctcaagctccaacttttccaacagctctttcttccggtcatcgagatgctcttcagaac-taactttag 614  Q
       ||||||||| |||||||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||||||||||    | |||||||||    
T  2213250 aaatatttgattaaaattaattttcaaacagctcacgctccaacttctccaacagctccttcttccggtcatcgagatgctcttcgtcccttaactttag 2213151  T
Q  615 atagagtttcattttcttagcttcagtcttttctttcatcaatttgtttttctcttgttgcaccaaggttaactctttcaattgttcaagctcttgctcc 714  Q
    ||| | ||||||||| ||||||| ||||||||||| || ||| |||||||| | ||||| ||||||  ||||||||||||||||||||| |||||||||     
T  2213150 atacattttcatttttttagcttgagtcttttcttgcagcaacttgtttttatgttgtttcaccaaatttaactctttcaattgttcaatctcttgctct 2213051  T
Q  715 ttgaattgtttgaattcaacccactcctttt 745  Q
    || |||| |||||||| |||||| |||||||    
T  2213050 tttaattctttgaattgaacccattcctttt 2213020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 418 - 745
Target Start/End: Original strand, 33606073 - 33606380
Alignment:
Q  418 aattattaaagcaaacactacagacttgacaccattgacaattattaaagcaaacagtggggactaaacaacacagacaattttgatcgaatacnnnnnn 517  Q
    ||||||||||| ||||| |  ||||| |||| || | ||||||||||||| ||||| |||| |||| ||||||| ||||||||||| |||||||          
T  33606073 aattattaaagtaaacattggagactagacaacactaacaattattaaagtaaacattgggaactagacaacactgacaattttgaccgaataccaacaa 33606172  T
Q  518 ntatttgattgaaattaattttcaaacagctcaagctccaacttttccaacagctctttcttccggtcatcgagatgctcttcagaac-taactttagat 616  Q
     ||||||||||||||||||||  |||||||||| ||||||||| |||||||| |||||| ||||||||||||||||||||||| |||| |||||||| ||    
T  33606173 atatttgattgaaattaatttcaaaacagctcacgctccaactcttccaacaactcttttttccggtcatcgagatgctcttcggaacttaactttacat 33606272  T
Q  617 agagtttcattttcttagcttcagtcttttctttcatcaatttgtttttctcttgttgcaccaaggttaactctttcaattgttcaagctcttgctcctt 716  Q
    | ||||||| |||||                     ||||| |||||||||| ||||||||||| || ||||||||||||||||||| ||||||| ||||    
T  33606273 atagtttcaatttct---------------------tcaatctgtttttctcctgttgcaccaacgtgaactctttcaattgttcaatctcttgcacctt 33606351  T
Q  717 gaattgtttgaattcaacccactcctttt 745  Q
    || || |||||||| ||||||||||||||    
T  33606352 gatttctttgaattgaacccactcctttt 33606380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 210 - 365
Target Start/End: Complemental strand, 34435850 - 34435682
Alignment:
Q  210 gaagtggatatgaatgagatttgtgatattgaaagtagatatgagtccctat-------------gtgtggtggacactgacgcattcaaaataagttat 296  Q
    ||||| |||||||||||||||||||| |||| ||||||||||||||||||||             |||||||||||||||||| |||| |||||||||||    
T  34435850 gaagtagatatgaatgagatttgtgaaattggaagtagatatgagtccctatatataagtacattgtgtggtggacactgacggattcgaaataagttat 34435751  T
Q  297 tgtattgtattaaagcaaacggttgagataattattaaagcaaatagtatgtgaaataatggtcacaca 365  Q
    |||||||||||||||||||| || |||||||||||||||||||||| ||||||||||||||| ||||||    
T  34435750 tgtattgtattaaagcaaacagtggagataattattaaagcaaatattatgtgaaataatggacacaca 34435682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 519 - 745
Target Start/End: Original strand, 28446370 - 28446576
Alignment:
Q  519 tatttgattgaaattaattttcaaacagctcaagctccaacttttccaacagctctttcttccggtcatcgagatgctcttcagaact-aactttagata 617  Q
    ||||||||||||||||||||  ||||| ||||| | ||||||||||||||| ||||||||||||||||| |||||||||||| | ||| ||||||| |||    
T  28446370 tatttgattgaaattaatttcaaaacaactcaaacaccaacttttccaacatctctttcttccggtcattgagatgctcttcgggacttaactttacata 28446469  T
Q  618 gagtttcattttcttagcttcagtcttttctttcatcaatttgtttttctcttgttgcaccaaggttaactctttcaattgttcaagctcttgctccttg 717  Q
     | ||||||||||||                      |||||||||||||| |||||||||||||| ||||||||||||||||||| ||||||| | |||    
T  28446470 caatttcattttcttt---------------------aatttgtttttctcctgttgcaccaaggtgaactctttcaattgttcaatctcttgcactttg 28446548  T
Q  718 aattgtttgaattcaacccactcctttt 745  Q
    | ||||||||||||||||||||||||||    
T  28446549 atttgtttgaattcaacccactcctttt 28446576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 478 - 745
Target Start/End: Original strand, 36657588 - 36657834
Alignment:
Q  478 ggactaaacaacacagacaattttgatcgaatacnnnnnnntatttgattgaaattaattttcaaacagctcaagctccaacttttccaacagctctttc 577  Q
    |||||| ||||||| ||||||||||| | |||||       |||||||||||||||||||||||||||||||| ||||||| ||||| ||||||| |||     
T  36657588 ggactagacaacactgacaattttgaccaaatacaaacaaatatttgattgaaattaattttcaaacagctcacgctccaagttttctaacagctattt- 36657686  T
Q  578 ttccggtcatcgagatgctcttcagaac-taactttagatagagtttcattttcttagcttcagtcttttctttcatcaatttgtttttctcttgttgca 676  Q
    || ||||||| |||||||||||| |||| |||||||| ||| |||||||||||||                     ||||| |||||||||| | |||||    
T  36657687 tttcggtcattgagatgctcttcggaacttaactttacatacagtttcattttct---------------------tcaatctgtttttctccttttgca 36657765  T
Q  677 ccaaggttaactctttcaattgttcaagctcttgctccttgaattgtttgaattcaacccactcctttt 745  Q
    |||||||  |||||||||||||||||| ||||||| |||||| || ||||||||||| |||||||||||    
T  36657766 ccaaggtgtactctttcaattgttcaatctcttgcaccttgatttctttgaattcaatccactcctttt 36657834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 174 - 340
Target Start/End: Complemental strand, 16173405 - 16173228
Alignment:
Q  174 atattggaagtagattg-aatgaaatttgtgatattggaagtggatatgaatgagatttgtgatattgaaagtagatatgagtcccta------------ 260  Q
    ||||||||||||||| | ||||| ||||||||| |||||||| ||| ||||||||||||||||||||| |||||||||||||| ||||                
T  16173405 atattggaagtagataggaatgagatttgtgattttggaagtagatgtgaatgagatttgtgatattgtaagtagatatgagtacctatatataagtaca 16173306  T
Q  261 -tgtgtggtggacactgacgcattcaaaataagttattgtattgtattaaagcaaacggttgagataattattaaagcaaa 340  Q
     ||||||||||||||||||| |||| |||||||||||||||||||||||||||||||  |   ||||||||||||||||||    
T  16173305 ttgtgtggtggacactgacggattcgaaataagttattgtattgtattaaagcaaacatt---gataattattaaagcaaa 16173228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 648 - 745
Target Start/End: Complemental strand, 34435375 - 34435278
Alignment:
Q  648 tttcatcaatttgtttttctcttgttgcaccaaggttaactctttcaattgttcaagctcttgctccttgaattgtttgaattcaacccactcctttt 745  Q
    |||| ||||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||| |||||| || |||||||||||||||||||||||    
T  34435375 tttcttcaatttgtttttctcttgttgcaccaagttgaactctttcaattgttcaatctcttgcaccttgatttctttgaattcaacccactcctttt 34435278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 261 - 365
Target Start/End: Original strand, 33605870 - 33605978
Alignment:
Q  261 tgtgtggtggacactgacgcattcaaaataagttattgtattgtattaaagcaaacggttgagataattatta----aagcaaatagtatgtgaaataat 356  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||||||||||||  | |||||||||||||    |||||||||||||||||||||||    
T  33605870 tgtgtggtggacactgacggattcgaaataagttattgtattgtattaaagcaaacaatggagataattattaaagcaagcaaatagtatgtgaaataat 33605969  T
Q  357 ggtcacaca 365  Q
    || ||||||    
T  33605970 gggcacaca 33605978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 455 - 595
Target Start/End: Complemental strand, 34435541 - 34435401
Alignment:
Q  455 acaattattaaagcaaacagtggggactaaacaacacagacaattttgatcgaatacnnnnnnntatttgattgaaattaattttcaaacagctcaagct 554  Q
    ||||||||||||||||||| | ||||||| ||||||  ||||||||||| |||||||       ||||||||||||||||||||  ||| |||||| |||    
T  34435541 acaattattaaagcaaacactagggactagacaacattgacaattttgaccgaatacaaacaaatatttgattgaaattaatttcaaaatagctcacgct 34435442  T
Q  555 ccaacttttccaacagctctttcttccggtcatcgagatgc 595  Q
    ||||||||||||||| |||||| |||||||| |||||||||    
T  34435441 ccaacttttccaacaactcttttttccggtcgtcgagatgc 34435401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 174 - 340
Target Start/End: Complemental strand, 3616808 - 3616631
Alignment:
Q  174 atattggaagtagattg-aatgaaatttgtgatattggaagtggatatgaatgagatttgtgatattgaaagtagatatgagtcccta------------ 260  Q
    ||||||||| ||||| | ||||| |||||||||||||||| | |||| |||||||||||||||||||| ||||||| |||||||||||                
T  3616808 atattggaaatagataggaatgagatttgtgatattggaaatagataggaatgagatttgtgatattggaagtagacatgagtccctatatataagtaca 3616709  T
Q  261 -tgtgtggtggacactgacgcattcaaaataagttattgtattgtattaaagcaaacggttgagataattattaaagcaaa 340  Q
     ||||||||||||||||||| |||| |||||||||||||||||||||||||||||||  |   ||||||||||||||||||    
T  3616708 ttgtgtggtggacactgacggattcgaaataagttattgtattgtattaaagcaaacact---gataattattaaagcaaa 3616631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 174 - 340
Target Start/End: Original strand, 8993470 - 8993647
Alignment:
Q  174 atattggaagtagattg-aatgaaatttgtgatattggaagtggatatgaatgagatttgtgatattgaaagtagatatgagtcccta------------ 260  Q
    ||||||||| ||||| | ||||| |||||||||||||||| | |||| |||||||||||||||||||| ||||||| |||||||||||                
T  8993470 atattggaaatagataggaatgagatttgtgatattggaaatagataggaatgagatttgtgatattggaagtagacatgagtccctatatataagtaca 8993569  T
Q  261 -tgtgtggtggacactgacgcattcaaaataagttattgtattgtattaaagcaaacggttgagataattattaaagcaaa 340  Q
     ||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||  |   ||||||||||||||||||    
T  8993570 ttgtgtggtggacactaacggattcgaaataagttattgtattgtattaaagcaaacact---gataattattaaagcaaa 8993647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 174 - 340
Target Start/End: Original strand, 13112248 - 13112425
Alignment:
Q  174 atattggaagtagattg-aatgaaatttgtgatattggaagtggatatgaatgagatttgtgatattgaaagtagatatgagtcccta------------ 260  Q
    ||||||||| ||||| | ||||| |||||||||||||||| | |||| |||||||||||||||||||| ||||||| |||||||||||                
T  13112248 atattggaaatagataggaatgagatttgtgatattggaaatagataggaatgagatttgtgatattggaagtagacatgagtccctatatataagtaca 13112347  T
Q  261 -tgtgtggtggacactgacgcattcaaaataagttattgtattgtattaaagcaaacggttgagataattattaaagcaaa 340  Q
     ||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||  |   ||||||||||||||||||    
T  13112348 ttgtgtggtggacactaacggattcgaaataagttattgtattgtattaaagcaaacact---gataattattaaagcaaa 13112425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 174 - 340
Target Start/End: Complemental strand, 3531694 - 3531517
Alignment:
Q  174 atattggaagtagattg-aatgaaatttgtgatattggaagtggatatgaatgagatttgtgatattgaaagtagatatgagtcccta------------ 260  Q
    ||||||||||||||| | ||||| |||||||||||||||| | |||| |||||||||||||||||||| ||||||| |||||||||||                
T  3531694 atattggaagtagataggaatgagatttgtgatattggaaatagataggaatgagatttgtgatattggaagtagacatgagtccctatatataagtaca 3531595  T
Q  261 -tgtgtggtggacactgacgcattcaaaataagttattgtattgtattaaagcaaacggttgagataattattaaagcaaa 340  Q
     |||||||  |||||| ||| |||| |||||||||||||||||||||||||||||||  |   ||||||||||||||||||    
T  3531594 ttgtgtggacgacactaacggattcgaaataagttattgtattgtattaaagcaaacact---gataattattaaagcaaa 3531517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 541 - 630
Target Start/End: Complemental strand, 53182355 - 53182265
Alignment:
Q  541 aaacagctcaagctccaacttttccaacagctctttcttccggtcatcgagatgctcttcagaac-taactttagatagagtttcattttc 630  Q
    |||||||||| || |||| ||||||||||||||||| ||||||||||| |||||||||||||||| |||||||||||| | ||||||||||    
T  53182355 aaacagctcacgcaccaagttttccaacagctcttttttccggtcatcaagatgctcttcagaacttaactttagatacattttcattttc 53182265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 177 - 261
Target Start/End: Complemental strand, 53182724 - 53182639
Alignment:
Q  177 ttggaagtagat-tgaatgaaatttgtgatattggaagtggatatgaatgagatttgtgatattgaaagtagatatgagtccctat 261  Q
    |||||||||||| ||||||| |||||||| |||| |||| |||||||||||||||||||| |||| ||||||||||||||||||||    
T  53182724 ttggaagtagatatgaatgagatttgtgaaattgaaagtagatatgaatgagatttgtgaaattggaagtagatatgagtccctat 53182639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 415 - 491
Target Start/End: Complemental strand, 3531411 - 3531335
Alignment:
Q  415 gataattattaaagcaaacactacagacttgacaccattgacaattattaaagcaaacagtggggactaaacaacac 491  Q
    |||||||||||||||||||||||| |||| |||| || |||||| ||||||||||||||||| |||||| |||||||    
T  3531411 gataattattaaagcaaacactacggactagacaacactgacaaatattaaagcaaacagtgaggactagacaacac 3531335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 176 - 261
Target Start/End: Complemental strand, 46915875 - 46915789
Alignment:
Q  176 attggaagtagat-tgaatgaaatttgtgatattggaagtggatatgaatgagatttgtgatattgaaagtagatatgagtccctat 261  Q
    |||| |||||||| ||||||| |||||||| ||||||||| ||| | ||||||| |||||| |||||||||||||||||||||||||    
T  46915875 attgaaagtagatatgaatgagatttgtgaaattggaagtagattttaatgagacttgtgaaattgaaagtagatatgagtccctat 46915789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 177 - 258
Target Start/End: Complemental strand, 2213678 - 2213596
Alignment:
Q  177 ttggaagtagat-tgaatgaaatttgtgatattggaagtggatatgaatgagatttgtgatattgaaagtagatatgagtccc 258  Q
    ||||||| |||| ||||||| |||||||| |||| |||| ||| | ||||||| |||||| ||||||||||||||||||||||    
T  2213678 ttggaagaagatatgaatgagatttgtgaaattgaaagtagattttaatgagacttgtgaaattgaaagtagatatgagtccc 2213596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 174 - 250
Target Start/End: Complemental strand, 3616839 - 3616762
Alignment:
Q  174 atattggaagtagattg-aatgaaatttgtgatattggaagtggatatgaatgagatttgtgatattgaaagtagata 250  Q
    ||||||||| ||||| | ||||| |||||||||||||||| | |||| |||||||||||||||||||| || ||||||    
T  3616839 atattggaaatagataggaatgagatttgtgatattggaaatagataggaatgagatttgtgatattggaaatagata 3616762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 177 - 249
Target Start/End: Complemental strand, 46915905 - 46915832
Alignment:
Q  177 ttggaagtagat-tgaatgaaatttgtgatattggaagtggatatgaatgagatttgtgatattgaaagtagat 249  Q
    ||||||| |||| ||||||| |||||||| |||| |||| |||||||||||||||||||| |||| ||||||||    
T  46915905 ttggaagaagatatgaatgagatttgtgaaattgaaagtagatatgaatgagatttgtgaaattggaagtagat 46915832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 653 - 745
Target Start/End: Complemental strand, 53182263 - 53182171
Alignment:
Q  653 tcaatttgtttttctcttgttgcaccaaggttaactctttcaattgttcaagctcttgctccttgaattgtttgaattcaacccactcctttt 745  Q
    ||||| |||||||||| |||||||||  |||  | |||||||| ||||||| |||||  ||||||| || |||||||| ||||||||||||||    
T  53182263 tcaatctgtttttctcctgttgcaccttggtgtagtctttcaaatgttcaatctctttatccttgatttctttgaattgaacccactcctttt 53182171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 207 - 253
Target Start/End: Complemental strand, 46915905 - 46915859
Alignment:
Q  207 ttggaagtggatatgaatgagatttgtgatattgaaagtagatatga 253  Q
    |||||||  |||||||||||||||||||| |||||||||||||||||    
T  46915905 ttggaagaagatatgaatgagatttgtgaaattgaaagtagatatga 46915859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 201 - 250
Target Start/End: Complemental strand, 3531697 - 3531648
Alignment:
Q  201 gtgatattggaagtggatatgaatgagatttgtgatattgaaagtagata 250  Q
    |||||||||||||| |||| |||||||||||||||||||| || ||||||    
T  3531697 gtgatattggaagtagataggaatgagatttgtgatattggaaatagata 3531648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 415 - 476
Target Start/End: Complemental strand, 3616402 - 3616339
Alignment:
Q  415 gataattattaaagcaaacactacagacttgacacca--ttgacaattattaaagcaaacagtg 476  Q
    |||||||||||||||||||||||| |||| |||| ||   ||| ||||||||||||||||||||    
T  3616402 gataattattaaagcaaacactacggactagacaacactctgataattattaaagcaaacagtg 3616339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 415 - 476
Target Start/End: Complemental strand, 3616484 - 3616421
Alignment:
Q  415 gataattattaaagcaaacactacagacttgacacca--ttgacaattattaaagcaaacagtg 476  Q
    |||||||||||||||||||||||| |||| |||| ||   ||| ||||||||||||||||||||    
T  3616484 gataattattaaagcaaacactacggactagacaacactctgataattattaaagcaaacagtg 3616421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 415 - 476
Target Start/End: Complemental strand, 3616566 - 3616503
Alignment:
Q  415 gataattattaaagcaaacactacagacttgacacca--ttgacaattattaaagcaaacagtg 476  Q
    |||||||||||||||||||||||| |||| |||| ||   ||| ||||||||||||||||||||    
T  3616566 gataattattaaagcaaacactacggactagacaacactctgataattattaaagcaaacagtg 3616503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 415 - 491
Target Start/End: Complemental strand, 16173130 - 16173054
Alignment:
Q  415 gataattattaaagcaaacactacagacttgacaccattgacaattattaaagcaaacagtggggactaaacaacac 491  Q
    |||| ||||||||||||||| |   |||| |||| || ||| ||||||||||||||||||| ||||||| |||||||    
T  16173130 gatatttattaaagcaaacagtcgggactagacaacactgataattattaaagcaaacagtcgggactagacaacac 16173054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 201 - 249
Target Start/End: Complemental strand, 16173408 - 16173360
Alignment:
Q  201 gtgatattggaagtggatatgaatgagatttgtgatattgaaagtagat 249  Q
    |||||||||||||| |||| |||||||||||||||| ||| ||||||||    
T  16173408 gtgatattggaagtagataggaatgagatttgtgattttggaagtagat 16173360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 324 - 363
Target Start/End: Complemental strand, 53182560 - 53182521
Alignment:
Q  324 ataattattaaagcaaatagtatgtgaaataatggtcaca 363  Q
    |||||||||||||||||||||| |||||||||||| ||||    
T  53182560 ataattattaaagcaaatagtaggtgaaataatgggcaca 53182521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 453 - 511
Target Start/End: Complemental strand, 53182428 - 53182370
Alignment:
Q  453 tgacaattattaaagcaaacagtggggactaaacaacacagacaattttgatcgaatac 511  Q
    ||||||||||||||| ||||| ||||  ||| ||||||| ||||||||||| |||||||    
T  53182428 tgacaattattaaagtaaacattgggacctagacaacactgacaattttgaccgaatac 53182370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 250
Target Start/End: Complemental strand, 3616842 - 3616793
Alignment:
Q  201 gtgatattggaagtggatatgaatgagatttgtgatattgaaagtagata 250  Q
    |||||||||||| | |||| |||||||||||||||||||| || ||||||    
T  3616842 gtgatattggaaatagataggaatgagatttgtgatattggaaatagata 3616793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 250
Target Start/End: Original strand, 8993467 - 8993516
Alignment:
Q  201 gtgatattggaagtggatatgaatgagatttgtgatattgaaagtagata 250  Q
    |||||||||||| | |||| |||||||||||||||||||| || ||||||    
T  8993467 gtgatattggaaatagataggaatgagatttgtgatattggaaatagata 8993516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 250
Target Start/End: Original strand, 13112245 - 13112294
Alignment:
Q  201 gtgatattggaagtggatatgaatgagatttgtgatattgaaagtagata 250  Q
    |||||||||||| | |||| |||||||||||||||||||| || ||||||    
T  13112245 gtgatattggaaatagataggaatgagatttgtgatattggaaatagata 13112294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 324 - 365
Target Start/End: Complemental strand, 34435675 - 34435634
Alignment:
Q  324 ataattattaaagcaaatagtatgtgaaataatggtcacaca 365  Q
    |||||||||||||||||||||| |||||||||| | ||||||    
T  34435675 ataattattaaagcaaatagtaggtgaaataataggcacaca 34435634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 181; Significance: 2e-97; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 360 - 745
Target Start/End: Original strand, 22658857 - 22659245
Alignment:
Q  360 cacacattccaacgaatggaggaagaccttcaaatagtatgtgaaataa--gtcacggataattattaaagcaaacactacagacttgacaccattgaca 457  Q
    |||| |||||||| |||||||||| ||||| ||||||| | ||||||||  |||| ||||||||  ||||||||||||||  |||| |||| || |||||    
T  22658857 cacatattccaacaaatggaggaacacctttaaatagtgtttgaaataaaagtcagggataattggtaaagcaaacactagggactagacaacactgaca 22658956  T
Q  458 attattaaagcaaacagtggggactaaacaacacagacaattttgatcgaatacnnnnnnntatttgattgaaattaattttcaaacagctcaagctcca 557  Q
    | |||||||||||||| | | ||||| ||||||| || ||||||||  ||||||       ||||||||| |||||||||||||||||||||| ||||||    
T  22658957 aatattaaagcaaacactcgagactagacaacactgataattttgactgaatacaaacaaatatttgattaaaattaattttcaaacagctcacgctcca 22659056  T
Q  558 acttttccaacagctctttcttccggtcatcgagatgctcttcagaact-aactttagatagagtttcattttcttagcttcagtcttttctttcatcaa 656  Q
    ||    |||||||||||||||||||||||||||||||||||||  |||| ||||||||||| | ||||||||||||||||||||||||||||| || |||    
T  22659057 acagccccaacagctctttcttccggtcatcgagatgctcttcgaaacttaactttagatacattttcattttcttagcttcagtcttttcttgcagcaa 22659156  T
Q  657 tttgtttttctcttgttgcaccaaggttaactctttcaattgttcaagctcttgctccttgaattgtttgaattcaacccactcctttt 745  Q
     |||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||| |||| |||||||| ||||||||||||||    
T  22659157 cttgtttttctgttgtttcaccaaggttaactctttcaattgttcaatctcttgctcctttaattctttgaattgaacccactcctttt 22659245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 415 - 745
Target Start/End: Original strand, 36520497 - 36520828
Alignment:
Q  415 gataattattaaagcaaacactacagacttgacaccattgacaattattaaagcaaacagtggggactaaacaacacagacaattttgatcgaatacnnn 514  Q
    |||||||||||||||||||||||| |||| |||| || |||||| |||||||||||||||| ||||||| ||||||| || ||| ||||  ||||||       
T  36520497 gataattattaaagcaaacactacggactagacaacactgacaaatattaaagcaaacagtcgggactagacaacactgataatgttgactgaatacaaa 36520596  T
Q  515 nnnntatttgattgaaattaattttcaaacagctcaagctccaacttttccaacagctctttcttccggtcatcgagatgctcttcagaac-taacttta 613  Q
        ||||||||| |||||||||||||||||||||| ||||||||||  |||||||||| ||||||||||||||||||||||||||    | ||||||||    
T  36520597 caaatatttgattaaaattaattttcaaacagctcacgctccaacttccccaacagctcattcttccggtcatcgagatgctcttcgtcccttaacttta 36520696  T
Q  614 gatagagtttcattttcttagcttcagtcttttctttcatcaatttgtttttctcttgttgcaccaaggttaactctttcaattgttcaagctcttgctc 713  Q
    |||| | ||||||||| ||||||| ||||||||||| || ||| |||||||||| ||||| |||||| |||||||||||||||||||||| |||||||||    
T  36520697 gatacattttcatttttttagcttgagtcttttcttgcagcaacttgtttttctgttgtttcaccaaagttaactctttcaattgttcaatctcttgctc 36520796  T
Q  714 cttgaattgtttgaattcaacccactcctttt 745  Q
     || || | |||||||| |||||| |||||||    
T  36520797 ttttaactctttgaattgaacccattcctttt 36520828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 415 - 745
Target Start/End: Original strand, 22193281 - 22193612
Alignment:
Q  415 gataattattaaagcaaacactacagacttgacaccattgacaattattaaagcaaacagtggggactaaacaacacagacaattttgatcgaatacnnn 514  Q
    |||||||||||||||||||||||| |||| |||| || |||||| |||||||||||||||| ||||||| ||||||| || ||| ||||  ||||||       
T  22193281 gataattattaaagcaaacactacggactagacaacactgacaaatattaaagcaaacagtcgggactagacaacactgataatgttgactgaatacaaa 22193380  T
Q  515 nnnntatttgattgaaattaattttcaaacagctcaagctccaacttttccaacagctctttcttccggtcatcgagatgctcttcagaac-taacttta 613  Q
        ||||||||| |||||||||||||||||||||| ||||||| || ||||||||||| ||||||||||||||||||||||||||    | ||||||||    
T  22193381 caaatatttgattaaaattaattttcaaacagctcacgctccaaattctccaacagctccttcttccggtcatcgagatgctcttcgtcccttaacttta 22193480  T
Q  614 gatagagtttcattttcttagcttcagtcttttctttcatcaatttgtttttctcttgttgcaccaaggttaactctttcaattgttcaagctcttgctc 713  Q
    |||| | ||||||||| ||||||| ||||||||||| || ||| |||||||||| || || ||||||  ||||||||||||||||||||| |||||||||    
T  22193481 gatacattttcatttttttagcttgagtcttttcttgcagcaacttgtttttctgttttttcaccaaatttaactctttcaattgttcaatctcttgctc 22193580  T
Q  714 cttgaattgtttgaattcaacccactcctttt 745  Q
     || |||| |||||||| |||||| |||||||    
T  22193581 ttttaattctttgaattgaacccattcctttt 22193612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 177 - 365
Target Start/End: Complemental strand, 32128634 - 32128428
Alignment:
Q  177 ttggaagtagat-tgaatgaaatttgtgatattggaagtggatatgaatgagatttgtgatattgaaagtagatatgagtccctat-------------g 262  Q
    |||||||||||| ||||||| |||||||| ||||||||| |||||||||||||||||||| |||  ||||||||||||||||||||             |    
T  32128634 ttggaagtagatatgaatgagatttgtgaaattggaagtagatatgaatgagatttgtgaaattagaagtagatatgagtccctatatataagtaaattg 32128535  T
Q  263 tgtggtggacactgacgcattcaaaataagttattgtattgtattaaagcaaacggttgagataattattaaa----gcaaatagtatgtgaaataatgg 358  Q
    || |||||||||||||| |||  ||||||||||||||||||||||||||||||  || |||||||||||||||    |||||||||||||||||||||||    
T  32128534 tgcggtggacactgacggatttgaaataagttattgtattgtattaaagcaaaaagtggagataattattaaagcaagcaaatagtatgtgaaataatgg 32128435  T
Q  359 tcacaca 365  Q
     ||||||    
T  32128434 gcacaca 32128428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 420 - 632
Target Start/End: Original strand, 26814155 - 26814368
Alignment:
Q  420 ttattaaagcaaacactacagacttgacaccattgacaattattaaagcaaacagtggggactaaacaacacagacaattttgatcgaatacnnnnnnnt 519  Q
    ||||||||| ||||| |  ||||| |||| || | ||| ||||||||| ||||| ||||||||| ||||||| ||||||||||| | |||||       |    
T  26814155 ttattaaagtaaacattggagactagacaacactaacacttattaaagtaaacattggggactagacaacactgacaattttgaccaaatacaaacaaat 26814254  T
Q  520 atttgattgaaattaattttcaaacagctcaagctccaacttttccaacagctctttcttccggtcatcgagatgctcttcagaac-taactttagatag 618  Q
    |||||| ||||||||||||  |||||||||| |||||||||  ||||||||| |||| ||||||||||| ||||||||||| |||| |||||||| |||     
T  26814255 atttgactgaaattaatttcaaaacagctcacgctccaactcctccaacagcgcttttttccggtcatcaagatgctcttcggaacttaactttacatac 26814354  T
Q  619 agtttcattttctt 632  Q
    ||||||||||||||    
T  26814355 agtttcattttctt 26814368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 176 - 365
Target Start/End: Original strand, 26813851 - 26814058
Alignment:
Q  176 attggaagtagat-tgaatgaaatttgtgatattggaagtggatatgaatgagatttgtgatattgaaagtagatatgagtccctat------------- 261  Q
    |||| |||||||| ||||||| |||||||| ||||||||| ||||||||||||||||||||  ||  ||||||||||||||||||||                 
T  26813851 attgaaagtagatatgaatgagatttgtgaaattggaagtagatatgaatgagatttgtgaatttagaagtagatatgagtccctatatataagtaaatt 26813950  T
Q  262 gtgtggtggacactgacgcattcaaaataagttattgtattgtattaaagcaaacggttgagataattatta----aagcaaatagtatgtgaaataatg 357  Q
    |||||||||||||| ||| |||  ||||||||||||||||||||||||||||||  ||  ||||||||||||    ||||||||||||||||||||||||    
T  26813951 gtgtggtggacactaacggatttgaaataagttattgtattgtattaaagcaaaaagtgaagataattattaaagcaagcaaatagtatgtgaaataatg 26814050  T
Q  358 gtcacaca 365  Q
    | ||||||    
T  26814051 ggcacaca 26814058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 174 - 316
Target Start/End: Original strand, 22658389 - 22658545
Alignment:
Q  174 atattggaagtagattg-aatgaaatttgtgatattggaagtggatatgaatgagatttgtgatattgaaagtagatatgagtcccta------------ 260  Q
    ||||||||| ||||| | ||||| |||||||||||||||||| ||||||||||||||||||||||||| |||||||||||| ||||||                
T  22658389 atattggaaatagataggaatgagatttgtgatattggaagtagatatgaatgagatttgtgatattggaagtagatatgaatccctatatataagtaca 22658488  T
Q  261 -tgtgtggtggacactgacgcattcaaaataagttattgtattgtattaaagcaaac 316  Q
     ||||||||||||||||| | |||| |||||||||||||||||||||||||||||||    
T  22658489 ttgtgtggtggacactgaaggattcgaaataagttattgtattgtattaaagcaaac 22658545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 174 - 340
Target Start/End: Original strand, 36520190 - 36520367
Alignment:
Q  174 atattggaagtagattg-aatgaaatttgtgatattggaagtggatatgaatgagatttgtgatattgaaagtagatatgagtcccta------------ 260  Q
    ||||||||| ||||| | ||||| |||||||||||||||| | |||| |||||||||||||||||||| ||||||| |||||||||||                
T  36520190 atattggaaatagataggaatgagatttgtgatattggaaatagataggaatgagatttgtgatattggaagtagacatgagtccctatatataagtaca 36520289  T
Q  261 -tgtgtggtggacactgacgcattcaaaataagttattgtattgtattaaagcaaacggttgagataattattaaagcaaa 340  Q
     ||||||||||||||||||| |||| |||||||||||||||||||||||||||||||  |   ||||||||||||||||||    
T  36520290 ttgtgtggtggacactgacggattcgaaataagttattgtattgtattaaagcaaacact---gataattattaaagcaaa 36520367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 440 - 632
Target Start/End: Complemental strand, 32128272 - 32128079
Alignment:
Q  440 gacttgacaccattgacaattattaaagcaaacagtggggactaaacaacacagacaattttgatcgaatacnnnnnnntatttgattgaaattaatttt 539  Q
    |||| |||| || ||||||||||||||  ||||| |||  |||| ||||||| | ||||||||| |||||||       ||||||| ||||||||||||     
T  32128272 gactagacaacactgacaattattaaaataaacattggaaactagacaacactggcaattttgaccgaatacaaacaaatatttgactgaaattaatttc 32128173  T
Q  540 caaacagctcaagctccaacttttccaacagctctttcttccggtcatcgagatgctcttcagaac-taactttagatagagtttcattttctt 632  Q
     |||||||||| |||||||||  ||||||| | |||| ||||||||||| ||||||||||| |||| |||||||| ||| ||||||||||||||    
T  32128172 aaaacagctcacgctccaactcctccaacaacgcttttttccggtcatcaagatgctcttcggaacttaactttacatacagtttcattttctt 32128079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 174 - 253
Target Start/End: Original strand, 22658358 - 22658438
Alignment:
Q  174 atattggaagtagattg-aatgaaatttgtgatattggaagtggatatgaatgagatttgtgatattgaaagtagatatga 253  Q
    ||||||||||||||| | ||||| |||||||||||||||| | |||| |||||||||||||||||||| ||||||||||||    
T  22658358 atattggaagtagataggaatgagatttgtgatattggaaatagataggaatgagatttgtgatattggaagtagatatga 22658438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 177 - 253
Target Start/End: Original strand, 26813821 - 26813898
Alignment:
Q  177 ttggaagtagat-tgaatgaaatttgtgatattggaagtggatatgaatgagatttgtgatattgaaagtagatatga 253  Q
    |||||||||||| ||||||| |||||||| |||| |||| |||||||||||||||||||| |||| ||||||||||||    
T  26813821 ttggaagtagatatgaatgagatttgtgaaattgaaagtagatatgaatgagatttgtgaaattggaagtagatatga 26813898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 177 - 261
Target Start/End: Original strand, 22192887 - 22192972
Alignment:
Q  177 ttggaagtagat-tgaatgaaatttgtgatattggaagtggatatgaatgagatttgtgatattgaaagtagatatgagtccctat 261  Q
    ||||||| |||| ||||||| |||||||| |||| |||| ||| | ||||||| |||||| |||||||||||||||||||||||||    
T  22192887 ttggaagaagatatgaatgagatttgtgaaattgaaagtagattttaatgagacttgtgaaattgaaagtagatatgagtccctat 22192972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 685 - 745
Target Start/End: Original strand, 26814400 - 26814460
Alignment:
Q  685 aactctttcaattgttcaagctcttgctccttgaattgtttgaattcaacccactcctttt 745  Q
    ||||||||||||||||||| ||||||| |||||| || |||||||| ||||||||||||||    
T  26814400 aactctttcaattgttcaatctcttgcgccttgatttctttgaattgaacccactcctttt 26814460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 685 - 745
Target Start/End: Complemental strand, 32128047 - 32127987
Alignment:
Q  685 aactctttcaattgttcaagctcttgctccttgaattgtttgaattcaacccactcctttt 745  Q
    ||||||||||||||||||| ||| ||| |||||| || |||||||| ||||||||||||||    
T  32128047 aactctttcaattgttcaatctcatgcgccttgatttctttgaattgaacccactcctttt 32127987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 201 - 250
Target Start/End: Original strand, 22658355 - 22658404
Alignment:
Q  201 gtgatattggaagtggatatgaatgagatttgtgatattgaaagtagata 250  Q
    |||||||||||||| |||| |||||||||||||||||||| || ||||||    
T  22658355 gtgatattggaagtagataggaatgagatttgtgatattggaaatagata 22658404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 415 - 491
Target Start/End: Original strand, 22658630 - 22658706
Alignment:
Q  415 gataattattaaagcaaacactacagacttgacaccattgacaattattaaagcaaacagtggggactaaacaacac 491  Q
    |||||||||||||||||||| |   |||| |||| || |||||| |||||||||||| ||| ||||||| |||||||    
T  22658630 gataattattaaagcaaacagtggggactagacaacactgacaaatattaaagcaaatagtcgggactagacaacac 22658706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 457 - 497
Target Start/End: Original strand, 22658633 - 22658673
Alignment:
Q  457 aattattaaagcaaacagtggggactaaacaacacagacaa 497  Q
    ||||||||||||||||||||||||||| ||||||| |||||    
T  22658633 aattattaaagcaaacagtggggactagacaacactgacaa 22658673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 450 - 491
Target Start/End: Original strand, 22658545 - 22658586
Alignment:
Q  450 cattgacaattattaaagcaaacagtggggactaaacaacac 491  Q
    |||||| ||||||||||| ||||||||||||||| |||||||    
T  22658545 cattgataattattaaagtaaacagtggggactagacaacac 22658586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 250
Target Start/End: Original strand, 36520187 - 36520236
Alignment:
Q  201 gtgatattggaagtggatatgaatgagatttgtgatattgaaagtagata 250  Q
    |||||||||||| | |||| |||||||||||||||||||| || ||||||    
T  36520187 gtgatattggaaatagataggaatgagatttgtgatattggaaatagata 36520236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 170; Significance: 8e-91; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 170; E-Value: 8e-91
Query Start/End: Original strand, 360 - 750
Target Start/End: Original strand, 42562920 - 42563313
Alignment:
Q  360 cacacattccaacgaatggaggaagaccttcaaatagtatgtgaaataa--gtcacggataattattaaagcaaacactacagacttgacaccattgaca 457  Q
    ||||||||||||| |||| ||||| || |||||||||| | ||||||||  |||||||||||||  ||||||||||||||  |||  |||| || |||||    
T  42562920 cacacattccaacaaatgcaggaacactttcaaatagtgtttgaaataaaagtcacggataattggtaaagcaaacactagggaccagacaacactgaca 42563019  T
Q  458 attattaaagcaaacagtggggactaaacaacacagacaattttgatcgaatacnnnnnnntatttgattgaaattaattttcaaacagctcaagctcca 557  Q
    | |||||||||||||||  ||||||| |||||||  | ||| ||||  ||||||       ||||||||| |||||||||||||||||||||| ||||||    
T  42563020 aatattaaagcaaacagacgggactagacaacactaataatgttgactgaatacaaacaaatatttgattaaaattaattttcaaacagctcacgctcca 42563119  T
Q  558 acttttccaacagctctttcttccggtcatcgagatgctcttcagaact-aactttagatagagtttcattttcttagcttcagtcttttctttcatcaa 656  Q
    ||||  |||||||||| ||||||||||||||||||||||||||  |||| ||||||||||| | ||||||||||||||||| ||||||||||| || |||    
T  42563120 acttccccaacagctccttcttccggtcatcgagatgctcttcgaaacttaactttagatacattttcattttcttagcttgagtcttttcttgcagcaa 42563219  T
Q  657 tttgtttttctcttgttgcaccaaggttaactctttcaattgttcaagctcttgctccttgaattgtttgaattcaacccactcctttttcaca 750  Q
     |||||||||| ||||| |||||| |||||||||||||||||||||| |||||||||||| |||| |||||||| |||||| ||||||| ||||    
T  42563220 cttgtttttctgttgtttcaccaaagttaactctttcaattgttcaatctcttgctcctttaattctttgaattgaacccattccttttccaca 42563313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 155; E-Value: 7e-82
Query Start/End: Original strand, 415 - 745
Target Start/End: Original strand, 17468481 - 17468812
Alignment:
Q  415 gataattattaaagcaaacactacagacttgacaccattgacaattattaaagcaaacagtggggactaaacaacacagacaattttgatcgaatacnnn 514  Q
    |||||||||||||||||||||||| |||| |||| || |||||| |||||||||||||||| ||||||| ||||||| || ||| ||||  ||||||       
T  17468481 gataattattaaagcaaacactacggactagacaacactgacaaatattaaagcaaacagtcgggactagacaacactgataatgttgactgaatacaaa 17468580  T
Q  515 nnnntatttgattgaaattaattttcaaacagctcaagctccaacttttccaacagctctttcttccggtcatcgagatgctcttcagaac-taacttta 613  Q
        ||||||||| |||||||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||||||||||    | ||||||||    
T  17468581 caaatatttgattaaaattaattttcaaacagctcacgctccaacttctccaacagctccttcttccggtcatcgagatgctcttcgtcccttaacttta 17468680  T
Q  614 gatagagtttcattttcttagcttcagtcttttctttcatcaatttgtttttctcttgttgcaccaaggttaactctttcaattgttcaagctcttgctc 713  Q
    |||| | ||||||||| ||||||| ||||||||||| || ||| |||||||||| ||||| ||||||  ||||||||||||||||||||| |||||||||    
T  17468681 gatacattttcatttttttagcttgagtcttttcttgcagcaacttgtttttctgttgtttcaccaaatttaactctttcaattgttcaatctcttgctc 17468780  T
Q  714 cttgaattgtttgaattcaacccactcctttt 745  Q
     || |||| |||||||| |||||| |||||||    
T  17468781 ttttaattctttgaattgaacccattcctttt 17468812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 155; E-Value: 7e-82
Query Start/End: Original strand, 415 - 745
Target Start/End: Complemental strand, 25788776 - 25788445
Alignment:
Q  415 gataattattaaagcaaacactacagacttgacaccattgacaattattaaagcaaacagtggggactaaacaacacagacaattttgatcgaatacnnn 514  Q
    |||||||||||||||||||||||| |||| |||| || |||||| |||||||||||||||| ||||||| ||||||| || ||| ||||  ||||||       
T  25788776 gataattattaaagcaaacactacggactagacaacactgacaaatattaaagcaaacagtcgggactagacaacactgataatgttgactgaatacaaa 25788677  T
Q  515 nnnntatttgattgaaattaattttcaaacagctcaagctccaacttttccaacagctctttcttccggtcatcgagatgctcttcagaac-taacttta 613  Q
        ||||||||| |||||||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||||||||||    | ||||||||    
T  25788676 caaatatttgattaaaattaattttcaaacagctcacgctccaacttctccaacagctccttcttccggtcatcgagatgctcttcgtcccttaacttta 25788577  T
Q  614 gatagagtttcattttcttagcttcagtcttttctttcatcaatttgtttttctcttgttgcaccaaggttaactctttcaattgttcaagctcttgctc 713  Q
    |||| | ||||||||| ||||||| ||||||||||| || ||| |||||||||| ||||| ||||||  ||||||||||||||||||||| |||||||||    
T  25788576 gatacattttcatttttttagcttgagtcttttcttgcagcaacttgtttttctgttgtttcaccaaatttaactctttcaattgttcaatctcttgctc 25788477  T
Q  714 cttgaattgtttgaattcaacccactcctttt 745  Q
     || |||| |||||||| |||||| |||||||    
T  25788476 ttttaattctttgaattgaacccattcctttt 25788445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 155; E-Value: 7e-82
Query Start/End: Original strand, 415 - 745
Target Start/End: Complemental strand, 30416532 - 30416201
Alignment:
Q  415 gataattattaaagcaaacactacagacttgacaccattgacaattattaaagcaaacagtggggactaaacaacacagacaattttgatcgaatacnnn 514  Q
    |||||||||||||||||||||||| |||| |||| || |||||| |||||||||||||||| ||||||| ||||||| || ||| ||||  ||||||       
T  30416532 gataattattaaagcaaacactacggactagacaacactgacaaatattaaagcaaacagtcgggactagacaacactgataatgttgactgaatacaaa 30416433  T
Q  515 nnnntatttgattgaaattaattttcaaacagctcaagctccaacttttccaacagctctttcttccggtcatcgagatgctcttcagaac-taacttta 613  Q
        ||||||||| |||||||||||||||||||||| ||||||||||  |||||||||| ||||||||||||||||||||||||||    | ||||||||    
T  30416432 caaatatttgattaaaattaattttcaaacagctcacgctccaacttccccaacagctcattcttccggtcatcgagatgctcttcgtcccttaacttta 30416333  T
Q  614 gatagagtttcattttcttagcttcagtcttttctttcatcaatttgtttttctcttgttgcaccaaggttaactctttcaattgttcaagctcttgctc 713  Q
    |||| | ||||||||| ||||||| ||||||||||| || ||| |||||||||| ||||| |||||| |||||||||||||||||||||| |||||||||    
T  30416332 gatacattttcatttttttagcttgagtcttttcttgcagcaacttgtttttctgttgtttcaccaaagttaactctttcaattgttcaatctcttgctc 30416233  T
Q  714 cttgaattgtttgaattcaacccactcctttt 745  Q
     || |||| |||||||| |||||| |||||||    
T  30416232 ttttaattctttgaattgaacccattcctttt 30416201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 155; E-Value: 7e-82
Query Start/End: Original strand, 415 - 745
Target Start/End: Complemental strand, 42599431 - 42599100
Alignment:
Q  415 gataattattaaagcaaacactacagacttgacaccattgacaattattaaagcaaacagtggggactaaacaacacagacaattttgatcgaatacnnn 514  Q
    |||||||||||||||||||||||| |||| |||| || |||||| |||||||||||||||| ||||||| ||||||| || ||| ||||  ||||||       
T  42599431 gataattattaaagcaaacactacggactagacaacactgacaaatattaaagcaaacagtcgggactagacaacactgataatgttgactgaatacaaa 42599332  T
Q  515 nnnntatttgattgaaattaattttcaaacagctcaagctccaacttttccaacagctctttcttccggtcatcgagatgctcttcagaac-taacttta 613  Q
        ||||||||| |||||||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||||||||||    | ||||||||    
T  42599331 caaatatttgattaaaattaattttcaaacagctcacgctccaacttctccaacagctccttcttccggtcatcgagatgctcttcgtcccttaacttta 42599232  T
Q  614 gatagagtttcattttcttagcttcagtcttttctttcatcaatttgtttttctcttgttgcaccaaggttaactctttcaattgttcaagctcttgctc 713  Q
    |||| | ||||||||| ||||||| ||||||||||| || ||| |||||||||| ||||| ||||||  ||||||||||||||||||||| |||||||||    
T  42599231 gatacattttcatttttttagcttgagtcttttcttgcagcaacttgtttttctgttgtttcaccaaatttaactctttcaattgttcaatctcttgctc 42599132  T
Q  714 cttgaattgtttgaattcaacccactcctttt 745  Q
     || |||| |||||||| |||||| |||||||    
T  42599131 ttttaattctttgaattgaacccattcctttt 42599100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 149; E-Value: 3e-78
Query Start/End: Original strand, 415 - 745
Target Start/End: Complemental strand, 6046404 - 6046073
Alignment:
Q  415 gataattattaaagcaaacactacagacttgacaccattgacaattattaaagcaaacagtggggactaaacaacacagacaattttgatcgaatacnnn 514  Q
    |||||||||||||||||||||||| |||| |||| || |||||| ||||||||||||||||  |||||| ||||||| || ||| ||||  ||||||       
T  6046404 gataattattaaagcaaacactacggactagacaacactgacaaatattaaagcaaacagtcaggactagacaacactgataatgttgacggaatacaaa 6046305  T
Q  515 nnnntatttgattgaaattaattttcaaacagctcaagctccaacttttccaacagctctttcttccggtcatcgagatgctcttcagaac--taacttt 612  Q
        ||||||||| |||||||||||||||||||||| ||||||||||  |||||||||| |||||||||||||||||||||||||| |  |  |||||||    
T  6046304 caaatatttgattaaaattaattttcaaacagctcacgctccaacttccccaacagctcattcttccggtcatcgagatgctcttc-gtcctttaacttt 6046206  T
Q  613 agatagagtttcattttcttagcttcagtcttttctttcatcaatttgtttttctcttgttgcaccaaggttaactctttcaattgttcaagctcttgct 712  Q
    ||||| | ||||||||| ||||||| ||||||||||| || ||| |||||||||| ||||| |||||| |||||||||||||||||||||| ||||||||    
T  6046205 agatacattttcatttttttagcttgagtcttttcttgcagcaacttgtttttctgttgtttcaccaaagttaactctttcaattgttcaatctcttgct 6046106  T
Q  713 ccttgaattgtttgaattcaacccactcctttt 745  Q
    | || |||| |||||||| |||||| |||||||    
T  6046105 cttttaattctttgaattgaacccattcctttt 6046073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 149; E-Value: 3e-78
Query Start/End: Original strand, 421 - 745
Target Start/End: Original strand, 47146344 - 47146669
Alignment:
Q  421 tattaaagcaaacactacagacttgacaccattgacaattattaaagcaaacagtggggactaaacaacacagacaattttgatcgaatacnnnnnnnta 520  Q
    |||||||||||||||||| |||| |||| || |||||| |||||||||||||||| ||||||| ||||||| || ||| ||||  ||||||       ||    
T  47146344 tattaaagcaaacactacggactagacaacactgacaaatattaaagcaaacagtcgggactagacaacactgataatgttgactgaatacaaacaaata 47146443  T
Q  521 tttgattgaaattaattttcaaacagctcaagctccaacttttccaacagctctttcttccggtcatcgagatgctcttcagaac-taactttagataga 619  Q
    ||||||| |||||||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||||||||||    | |||||||||||| |    
T  47146444 tttgattaaaattaattttcaaacagctcacgctccaacttctccaacagctccttcttccggtcatcgagatgctcttcgtcccttaactttagataca 47146543  T
Q  620 gtttcattttcttagcttcagtcttttctttcatcaatttgtttttctcttgttgcaccaaggttaactctttcaattgttcaagctcttgctccttgaa 719  Q
     ||||||||| ||||||| ||||||||||| || ||| |||||||||| ||||| ||||||  ||||||||||||||||||||| ||||||||| || ||    
T  47146544 ttttcatttttttagcttgagtcttttcttgcagcaacttgtttttctgttgtttcaccaaatttaactctttcaattgttcaatctcttgctcttttaa 47146643  T
Q  720 ttgtttgaattcaacccactcctttt 745  Q
    || |||||||| |||||| |||||||    
T  47146644 ttctttgaattgaacccattcctttt 47146669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 415 - 745
Target Start/End: Complemental strand, 10425728 - 10425397
Alignment:
Q  415 gataattattaaagcaaacactacagacttgacaccattgacaattattaaagcaaacagtggggactaaacaacacagacaattttgatcgaatacnnn 514  Q
    |||||||||||||||||||||||| |||| |||| || |||||| |||||||||||||||| ||||||| ||||||| || ||| ||||  ||||||       
T  10425728 gataattattaaagcaaacactacggactagacaacactgacaaatattaaagcaaacagtcgggactagacaacactgataatgttgactgaatacaaa 10425629  T
Q  515 nnnntatttgattgaaattaattttcaaacagctcaagctccaacttttccaacagctctttcttccggtcatcgagatgctcttcagaac-taacttta 613  Q
        ||||||||| |||||||||||||||||||||| ||||||||||  |||||||||| |||||| |||||||||||||||||||    | ||||||||    
T  10425628 caaatatttgattaaaattaattttcaaacagctcacgctccaacttccccaacagctcattcttctggtcatcgagatgctcttcgtcccttaacttta 10425529  T
Q  614 gatagagtttcattttcttagcttcagtcttttctttcatcaatttgtttttctcttgttgcaccaaggttaactctttcaattgttcaagctcttgctc 713  Q
    |||| | ||||||||| ||||||| ||||||||||| || ||| |||||||||| ||||| |||||| |||||||||||||||||||||| |||||||||    
T  10425528 gatacattttcatttttttagcttgagtcttttcttgcagcaacttgtttttctgttgtttcaccaaagttaactctttcaattgttcaatctcttgctc 10425429  T
Q  714 cttgaattgtttgaattcaacccactcctttt 745  Q
     || || | |||||||| |||||| |||||||    
T  10425428 ttttaagtctttgaattgaacccattcctttt 10425397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 415 - 745
Target Start/End: Complemental strand, 25830733 - 25830402
Alignment:
Q  415 gataattattaaagcaaacactacagacttgacaccattgacaattattaaagcaaacagtggggactaaacaacacagacaattttgatcgaatacnnn 514  Q
    |||||||||||||||||||||||| |||| |||| || |||||| |||||||||||||||| ||||||| ||||||| || ||| ||||  ||||||       
T  25830733 gataattattaaagcaaacactacggactagacaacactgacaaatattaaagcaaacagtcgggactagacaacactgataatgttgactgaatacaaa 25830634  T
Q  515 nnnntatttgattgaaattaattttcaaacagctcaagctccaacttttccaacagctctttcttccggtcatcgagatgctcttcagaac-taacttta 613  Q
        ||||||||| |||||||||||||||||||||| ||||||| || ||||||||||| ||||||||||||||||||||||||||    | ||||||||    
T  25830633 caaatatttgattaaaattaattttcaaacagctcacgctccaaattctccaacagctccttcttccggtcatcgagatgctcttcgtcccttaacttta 25830534  T
Q  614 gatagagtttcattttcttagcttcagtcttttctttcatcaatttgtttttctcttgttgcaccaaggttaactctttcaattgttcaagctcttgctc 713  Q
    |||| | ||||||||| ||||||| ||||||||||| || ||| |||||||||| || || ||||||  ||||||||||||||||||||| |||||||||    
T  25830533 gatacattttcatttttttagcttgagtcttttcttgcagcaacttgtttttctgttttttcaccaaatttaactctttcaattgttcaatctcttgctc 25830434  T
Q  714 cttgaattgtttgaattcaacccactcctttt 745  Q
     || |||| |||||||| |||||| |||||||    
T  25830433 ttttaattctttgaattgaacccattcctttt 25830402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 146; E-Value: 2e-76
Query Start/End: Original strand, 407 - 740
Target Start/End: Original strand, 21227156 - 21227490
Alignment:
Q  407 aagtcacggataattattaaagcaaacactacagacttgacaccattgacaattattaaagcaaacagtggggactaaacaacacagacaattttgatcg 506  Q
    |||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||  |||||||  ||||||| | ||| ||||| ||    
T  21227156 aagtcacggacaattattaaagcaaacactacatacttgacaccattgacaattattaaagcaaacaccggggacttgacaacactgccaagtttgaccg 21227255  T
Q  507 aatacnnnnnnntatttgattgaaattaattttcaaacagctcaagctccaacttttccaacagctctttcttccggtcatcgagatgctcttcagaac- 605  Q
    |||||       || ||||||||||||||||| ||||||| ||  |  |||||||| |||||| ||||||||||||||||||||||||||||| |||||     
T  21227256 aatacaaacaaataattgattgaaattaatttccaaacagttcttggcccaactttcccaacatctctttcttccggtcatcgagatgctctttagaact 21227355  T
Q  606 taactttagatagagtttcattttcttagcttcagtcttttctttcatcaatttgtttttctcttgttgcaccaaggttaactctttcaattgttcaagc 705  Q
    || ||||||||| | ||||||||||||||  | |||| ||||||||||||||| |||  ||||| |||||| ||| | || ||  | |||| ||||||||    
T  21227356 tagctttagatacattttcattttcttagtatgagtcctttctttcatcaattggttaatctctagttgcatcaatgctatcttgtccaatcgttcaagc 21227455  T
Q  706 tcttgctccttgaattgtttgaattcaacccactc 740  Q
    |||| ||||||||||||||||||||||||||||||    
T  21227456 tctttctccttgaattgtttgaattcaacccactc 21227490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 455 - 745
Target Start/End: Original strand, 50019124 - 50019394
Alignment:
Q  455 acaattattaaagcaaacagtggggactaaacaacacagacaattttgatcgaatacnnnnnnntatttgattgaaattaattttcaaacagctcaagct 554  Q
    ||||||||||||||||||| ||||||||| |||||||  ||||||||||||||||||       |||||||||||||||||||| ||||||||||| |||    
T  50019124 acaattattaaagcaaacactggggactagacaacactaacaattttgatcgaatacaaacaaatatttgattgaaattaatttccaaacagctcacgct 50019223  T
Q  555 ccaacttttccaacagctctttcttccggtcatcgagatgctcttcagaac-taactttagatagagtttcattttcttagcttcagtcttttctttcat 653  Q
    |||| |||||||||| |||||| |||  |||||||||||||||||| |||| |||||||| ||| |||||||||||||                     |    
T  50019224 ccaagttttccaacaactcttttttctagtcatcgagatgctcttcggaacttaactttacatacagtttcattttct---------------------t 50019302  T
Q  654 caatttgtttttctcttgttgcaccaaggttaactctttcaattgttcaagctcttgctccttgaattgtttgaattcaacccactcctttt 745  Q
    |||| |||||||||| ||||||||||||||  |||||||||||||||||| ||||| | |||||| || |||||||||||||||||||||||    
T  50019303 caatatgtttttctcatgttgcaccaaggtgtactctttcaattgttcaatctctttcaccttgatttctttgaattcaacccactcctttt 50019394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 455 - 745
Target Start/End: Original strand, 33750690 - 33750960
Alignment:
Q  455 acaattattaaagcaaacagtggggactaaacaacacagacaattttgatcgaatacnnnnnnntatttgattgaaattaattttcaaacagctcaagct 554  Q
    ||||||||||||||||||| ||||||||| ||||||| ||||||||||| |||||||       |||||||||||||||||||| |||| |||||| |||    
T  33750690 acaattattaaagcaaacactggggactagacaacactgacaattttgaccgaatacaaacaattatttgattgaaattaatttccaaaaagctcacgct 33750789  T
Q  555 ccaacttttccaacagctctttcttccggtcatcgagatgctcttcagaac-taactttagatagagtttcattttcttagcttcagtcttttctttcat 653  Q
    |||| |||||||||| |||||| ||||||||||||||||||||||| |||| |||||||| ||| | |||||||||||                     |    
T  33750790 ccaagttttccaacacctcttttttccggtcatcgagatgctcttcggaacttaactttacatacaatttcattttct---------------------t 33750868  T
Q  654 caatttgtttttctcttgttgcaccaaggttaactctttcaattgttcaagctcttgctccttgaattgtttgaattcaacccactcctttt 745  Q
    |||| |||||||||| |||||||||| |||  ||||||||||||||||||  |||||| |||||| || |||||||||||||||||| ||||    
T  33750869 caatctgtttttctcctgttgcaccatggtgtactctttcaattgttcaatatcttgcaccttgatttctttgaattcaacccactcttttt 33750960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 407 - 739
Target Start/End: Complemental strand, 21230607 - 21230273
Alignment:
Q  407 aagtcacggataattattaaagcaaacactacagacttgacaccattgacaattattaaagcaaacagtggggactaaacaacacagacaattttgatcg 506  Q
    ||||||| || ||||||||||||||| | ||||||||||||| || ||||||||||||||||||||| ||||||||  ||| ||| | ||| |||| |||    
T  21230607 aagtcacagacaattattaaagcaaataatacagacttgacatcactgacaattattaaagcaaacactggggacttgacagcactgccaagtttggtcg 21230508  T
Q  507 -aatacnnnnnnntatttgattgaaattaattttcaaacagctcaagctccaacttttccaacagctctttcttccggtcatcgagatgctcttcagaac 605  Q
     ||  |       || |||||| |||||||||| |||| || ||  |  |||||||||||||||  ||||||||| ||||||||||||||||||  ||||    
T  21230507 gaactcagtcaaataattgattaaaattaatttccaaatagttcttggcccaacttttccaacatatctttcttctggtcatcgagatgctctttggaac 21230408  T
Q  606 -taactttagatagagtttcattttcttagcttcagtcttttctttcatcaatttgtttttctcttgttgcaccaaggttaactctttcaattgttcaag 704  Q
     || ||||| ||| | ||||||||||||||  | |||| ||||||||||||||| |||   |||  |||||| ||||| || ||  | |||| |||||||    
T  21230407 ttatctttatatacattttcattttcttagtatgagtcatttctttcatcaattggttagcctccagttgcatcaaggctatcttgtccaatcgttcaag 21230308  T
Q  705 ctcttgctccttgaattgtttgaattcaacccact 739  Q
    || ||  |||||||||||| |||||||| ||||||    
T  21230307 ctttttgtccttgaattgtatgaattcagcccact 21230273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 440 - 632
Target Start/End: Complemental strand, 26158129 - 26157936
Alignment:
Q  440 gacttgacaccattgacaattattaaagcaaacagtggggactaaacaacacagacaattttgatcgaatacnnnnnnntatttgattgaaattaatttt 539  Q
    |||| |||| || ||||| ||||||||| ||||| ||||||||| ||||||| ||||||||||| |||||||       ||||||| ||||||||||||     
T  26158129 gactagacaacactgacacttattaaagtaaacattggggactagacaacactgacaattttgaccgaatacaaccaaatatttgactgaaattaatttc 26158030  T
Q  540 caaacagctcaagctccaacttttccaacagctctttcttccggtcatcgagatgctcttcagaac-taactttagatagagtttcattttctt 632  Q
     ||||| |||| |  ||||||  ||||||| | |||| || |||||||| |||||||||||||||| |||||||| ||| ||||||||||||||    
T  26158029 aaaacaactcacgtaccaactcctccaacaacgctttttttcggtcatcaagatgctcttcagaacttaactttacatacagtttcattttctt 26157936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 653 - 745
Target Start/End: Complemental strand, 33188904 - 33188812
Alignment:
Q  653 tcaatttgtttttctcttgttgcaccaaggttaactctttcaattgttcaagctcttgctccttgaattgtttgaattcaacccactcctttt 745  Q
    ||||| |||||||||| |||||||||||||| ||||||||||||||||||| ||||||| |||||| || |||||||||||||||||||||||    
T  33188904 tcaatctgtttttctcctgttgcaccaaggtgaactctttcaattgttcaatctcttgcaccttgatttatttgaattcaacccactcctttt 33188812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 174 - 340
Target Start/End: Complemental strand, 30416815 - 30416638
Alignment:
Q  174 atattggaagtagattg-aatgaaatttgtgatattggaagtggatatgaatgagatttgtgatattgaaagtagatatgagtcccta------------ 260  Q
    ||||||||| ||||| | ||||| |||||||||||||||| | |||| |||||||||||||||||||| ||||||| |||||||||||                
T  30416815 atattggaaatagataggaatgagatttgtgatattggaaatagataggaatgagatttgtgatattggaagtagacatgagtccctatatataagtaca 30416716  T
Q  261 -tgtgtggtggacactgacgcattcaaaataagttattgtattgtattaaagcaaacggttgagataattattaaagcaaa 340  Q
     ||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||  |   ||||||||||||||||||    
T  30416715 ttgtgtggtggacactaacggattcgaaataagttattgtattgtattaaagcaaacact---gataattattaaagcaaa 30416638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 174 - 340
Target Start/End: Original strand, 42562585 - 42562762
Alignment:
Q  174 atattggaagtagattg-aatgaaatttgtgatattggaagtggatatgaatgagatttgtgatattgaaagtagatatgagtcccta------------ 260  Q
    ||||||||||||||| | ||||| |||||||||||||||| | |||| |||||| ||||||||||||| ||||||||||||| |||||                
T  42562585 atattggaagtagataggaatgagatttgtgatattggaaatagataggaatgaaatttgtgatattggaagtagatatgaggccctatatataagtaca 42562684  T
Q  261 -tgtgtggtggacactgacgcattcaaaataagttattgtattgtattaaagcaaacggttgagataattattaaagcaaa 340  Q
     ||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||  |   ||||||||||||||||||    
T  42562685 ttgtgtggtggacactaacggattcgaaataagttattgtattgtattaaagcaaacact---gataattattaaagcaaa 42562762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 180 - 363
Target Start/End: Original strand, 50018733 - 50018933
Alignment:
Q  180 gaagtagat-tgaatgaaatttgtgatattggaagtggatatgaatgagatttgtgatattgaaagtagatatgagtcccta-------------tgtgt 265  Q
    ||||||||| ||||||| |||||||| ||||||||| |||||||||||||||||||| |||| |||||||||||||||||||             |||||    
T  50018733 gaagtagatatgaatgagatttgtgaaattggaagtagatatgaatgagatttgtgaaattggaagtagatatgagtccctatatataagtacattgtgt 50018832  T
Q  266 ggtggacactgacgcattcaaaataagttattgta-ttgtattaa--agcaaacggttgagataattattaaagcaaatagtatgtgaaataatggtcac 362  Q
    |||||||||||||| |||| |||||||||||||||  || | |||   ||| || || || |||||||||||||||||||||| |||||||||||| |||    
T  50018833 ggtggacactgacggattcgaaataagttattgtaggtgaaataatgggcacacagtggacataattattaaagcaaatagtaggtgaaataatgggcac 50018932  T
Q  363 a 363  Q
    |    
T  50018933 a 50018933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 177 - 261
Target Start/End: Original strand, 51428769 - 51428854
Alignment:
Q  177 ttggaagtagat-tgaatgaaatttgtgatattggaagtggatatgaatgagatttgtgatattgaaagtagatatgagtccctat 261  Q
    |||||||||||| ||||||| |||||||| ||||||||| |||||||||||||||||||| |||| ||||||||||||||||||||    
T  51428769 ttggaagtagatatgaatgagatttgtgaaattggaagtagatatgaatgagatttgtgaaattggaagtagatatgagtccctat 51428854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 174 - 340
Target Start/End: Complemental strand, 6047050 - 6046873
Alignment:
Q  174 atattggaagtagattg-aatgaaatttgtgatattggaagtggatatgaatgagatttgtgatattgaaagtagatatgagtcccta------------ 260  Q
    ||||||||| ||||| | ||||| |||||||||||||||| | |||| |||||||||||||||||||| ||||||| |||||||||||                
T  6047050 atattggaaatagataggaatgagatttgtgatattggaaatagataggaatgagatttgtgatattggaagtagacatgagtccctatatataagtaca 6046951  T
Q  261 -tgtgtggtggacactgacgcattcaaaataagttattgtattgtattaaagcaaacggttgagataattattaaagcaaa 340  Q
     |||||||  |||||| ||| |||| |||||||||||||||||||||||||||||||  |   ||||||||||||||||||    
T  6046950 ttgtgtggacgacactaacggattcgaaataagttattgtattgtattaaagcaaacact---gataattattaaagcaaa 6046873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 174 - 340
Target Start/End: Complemental strand, 10426052 - 10425875
Alignment:
Q  174 atattggaagtagattg-aatgaaatttgtgatattggaagtggatatgaatgagatttgtgatattgaaagtagatatgagtcccta------------ 260  Q
    ||||||||| ||||| | ||||| |||||||||||||||| | |||| |||||||||||||||||||| ||||||| |||||||||||                
T  10426052 atattggaaatagataggaatgagatttgtgatattggaaatagataggaatgagatttgtgatattggaagtagacatgagtccctatatataagtaca 10425953  T
Q  261 -tgtgtggtggacactgacgcattcaaaataagttattgtattgtattaaagcaaacggttgagataattattaaagcaaa 340  Q
     |||||||| |||| | ||| |||| |||||||||||||||||||||||||||||||  |   ||||||||||||||||||    
T  10425952 ttgtgtggtcgacaataacgaattcgaaataagttattgtattgtattaaagcaaacact---gataattattaaagcaaa 10425875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 174 - 340
Target Start/End: Original strand, 17468198 - 17468375
Alignment:
Q  174 atattggaagtagattg-aatgaaatttgtgatattggaagtggatatgaatgagatttgtgatattgaaagtagatatgagtcccta------------ 260  Q
    ||||||||| ||||| | ||||| |||||||||||||||| | |||| |||||||||||||||||||| ||||||| |||||||||||                
T  17468198 atattggaaatagataggaatgagatttgtgatattggaaatagataggaatgagatttgtgatattggaagtagacatgagtccctatatataagtaca 17468297  T
Q  261 -tgtgtggtggacactgacgcattcaaaataagttattgtattgtattaaagcaaacggttgagataattattaaagcaaa 340  Q
     |||||||  |||||| ||| |||| |||||||||||||||||||||||||| ||||  |   ||||||||||||||||||    
T  17468298 ttgtgtggacgacactaacggattcgaaataagttattgtattgtattaaagaaaacact---gataattattaaagcaaa 17468375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 648 - 745
Target Start/End: Original strand, 33935473 - 33935570
Alignment:
Q  648 tttcatcaatttgtttttctcttgttgcaccaaggttaactctttcaattgttcaagctcttgctccttgaattgtttgaattcaacccactcctttt 745  Q
    |||| ||||| |||||||||| |||||||||  |||  |||||||||| ||||||| |||||||||||||| || |||||||| ||||||||||||||    
T  33935473 tttcttcaatctgtttttctcctgttgcaccttggtgtactctttcaaatgttcaatctcttgctccttgatttctttgaattgaacccactcctttt 33935570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 415 - 491
Target Start/End: Complemental strand, 42599550 - 42599474
Alignment:
Q  415 gataattattaaagcaaacactacagacttgacaccattgacaattattaaagcaaacagtggggactaaacaacac 491  Q
    |||||||||||||||||||||||| |||| |||| || |||||| |||||||||||||||| ||||||| |||||||    
T  42599550 gataattattaaagcaaacactacggactagacaacactgacaaatattaaagcaaacagtcgggactagacaacac 42599474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 415 - 491
Target Start/End: Complemental strand, 42599669 - 42599593
Alignment:
Q  415 gataattattaaagcaaacactacagacttgacaccattgacaattattaaagcaaacagtggggactaaacaacac 491  Q
    |||||||||||||||||||||||| |||| |||| || |||||| |||||||||||||||| ||||||| |||||||    
T  42599669 gataattattaaagcaaacactacggactagacaacactgacaaatattaaagcaaacagtcgggactagacaacac 42599593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 176 - 365
Target Start/End: Original strand, 33750389 - 33750595
Alignment:
Q  176 attggaagtagat-tgaatgaaatttgtgatattggaagtggatatgaatgagatttgtgatattgaaagtagatatgagtcccta-------------t 261  Q
    ||||||||||||| |||||   |||||||| ||||||||| |||||||||||||||| ||| |||| |||| ||||||||||||||             |    
T  33750389 attggaagtagatatgaataggatttgtgaaattggaagtagatatgaatgagatttctgaaattggaagtggatatgagtccctatatataagtacatt 33750488  T
Q  262 gtgtggtggacactgacgcattcaaaataagttattgta-ttgtattaaag--caaacggttgagataattattaaagcaaatagtatgtgaaataatgg 358  Q
    |||||||||||| ||||| |||| |||||||||||||||  || | ||| |  || | ||| || |||||||||||||||||||||| ||||||||||||    
T  33750489 gtgtggtggacaatgacggattcgaaataagttattgtaggtgaaataatggccacatggtggacataattattaaagcaaatagtaggtgaaataatgg 33750588  T
Q  359 tcacaca 365  Q
     ||||||    
T  33750589 gcacaca 33750595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 176 - 261
Target Start/End: Complemental strand, 42599878 - 42599792
Alignment:
Q  176 attggaagtagat-tgaatgaaatttgtgatattggaagtggatatgaatgagatttgtgatattgaaagtagatatgagtccctat 261  Q
    |||| |||||||| ||||||| |||||||| ||||||||| ||| | ||||||| |||||| |||||||||||||||||||||||||    
T  42599878 attgaaagtagatatgaatgagatttgtgaaattggaagtagattttaatgagacttgtgaaattgaaagtagatatgagtccctat 42599792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 177 - 257
Target Start/End: Complemental strand, 33189285 - 33189204
Alignment:
Q  177 ttggaagtagat-tgaatgaaatttgtgatattggaagtggatatgaatgagatttgtgatattgaaagtagatatgagtcc 257  Q
    |||||||||||| |||| || |||||||| | ||||||| |||||||||||||||||||| |||| ||||||||||||||||    
T  33189285 ttggaagtagatatgaacgagatttgtgaaagtggaagtagatatgaatgagatttgtgaaattggaagtagatatgagtcc 33189204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 415 - 491
Target Start/End: Complemental strand, 6046525 - 6046449
Alignment:
Q  415 gataattattaaagcaaacactacagacttgacaccattgacaattattaaagcaaacagtggggactaaacaacac 491  Q
    |||||||||||||||||||||||| |||| |||| || |||||| ||||||||||||||||  |||||| |||||||    
T  6046525 gataattattaaagcaaacactacggactagacaacactgacaaatattaaagcaaacagtcaggactagacaacac 6046449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 415 - 491
Target Start/End: Complemental strand, 6046687 - 6046611
Alignment:
Q  415 gataattattaaagcaaacactacagacttgacaccattgacaattattaaagcaaacagtggggactaaacaacac 491  Q
    |||||||||||||||||||||||| |||| |||| || |||||| ||||||||||||||||  |||||| |||||||    
T  6046687 gataattattaaagcaaacactacggactagacaacactgacaaatattaaagcaaacagtcaggactagacaacac 6046611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 415 - 491
Target Start/End: Complemental strand, 6046808 - 6046732
Alignment:
Q  415 gataattattaaagcaaacactacagacttgacaccattgacaattattaaagcaaacagtggggactaaacaacac 491  Q
    |||||||||||||||||||||||| |||| |||| || |||||| ||||||||||||||||  |||||| |||||||    
T  6046808 gataattattaaagcaaacactacggactagacaacactgacaaatattaaagcaaacagtcaggactagacaacac 6046732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 174 - 250
Target Start/End: Complemental strand, 6047081 - 6047004
Alignment:
Q  174 atattggaagtagattg-aatgaaatttgtgatattggaagtggatatgaatgagatttgtgatattgaaagtagata 250  Q
    ||||||||||||||| | ||||| |||||||||||||||| | |||| |||||||||||||||||||| || ||||||    
T  6047081 atattggaagtagataggaatgagatttgtgatattggaaatagataggaatgagatttgtgatattggaaatagata 6047004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 177 - 261
Target Start/End: Complemental strand, 25789170 - 25789085
Alignment:
Q  177 ttggaagtagat-tgaatgaaatttgtgatattggaagtggatatgaatgagatttgtgatattgaaagtagatatgagtccctat 261  Q
    ||||||| |||| ||||||| |||||||| |||| |||| ||| | ||||||| |||||| |||||||||||||||||||||||||    
T  25789170 ttggaagaagatatgaatgagatttgtgaaattgaaagtagattttaatgagacttgtgaaattgaaagtagatatgagtccctat 25789085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 177 - 261
Target Start/End: Complemental strand, 25831127 - 25831042
Alignment:
Q  177 ttggaagtagat-tgaatgaaatttgtgatattggaagtggatatgaatgagatttgtgatattgaaagtagatatgagtccctat 261  Q
    ||||||| |||| ||||||| |||||||| |||| |||| ||| | ||||||| |||||| |||||||||||||||||||||||||    
T  25831127 ttggaagaagatatgaatgagatttgtgaaattgaaagtagattttaatgagacttgtgaaattgaaagtagatatgagtccctat 25831042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 177 - 253
Target Start/End: Original strand, 33750359 - 33750436
Alignment:
Q  177 ttggaagtagat-tgaatgaaatttgtgatattggaagtggatatgaatgagatttgtgatattgaaagtagatatga 253  Q
    |||||||||||| ||||||| |||||||| ||||||||| |||||||||  ||||||||| |||| ||||||||||||    
T  33750359 ttggaagtagatatgaatgagatttgtgaaattggaagtagatatgaataggatttgtgaaattggaagtagatatga 33750436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 177 - 261
Target Start/End: Original strand, 47145845 - 47145930
Alignment:
Q  177 ttggaagtagat-tgaatgaaatttgtgatattggaagtggatatgaatgagatttgtgatattgaaagtagatatgagtccctat 261  Q
    ||||||| |||| ||||||| |||||||| |||| |||| ||| | ||||||| |||||| |||||||||||||||||||||||||    
T  47145845 ttggaagaagatatgaatgagatttgtgaaattgaaagtagattttaatgagacttgtgaaattgaaagtagatatgagtccctat 47145930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 416 - 497
Target Start/End: Original strand, 47146300 - 47146381
Alignment:
Q  416 ataattattaaagcaaacactacagacttgacaccattgacaattattaaagcaaacagtggggactaaacaacacagacaa 497  Q
    ||||||||||||||||||||||| |||| |||| || |||||| |||||||||||||| |  |||||| ||||||| |||||    
T  47146300 ataattattaaagcaaacactacggactagacaacactgacaaatattaaagcaaacactacggactagacaacactgacaa 47146381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 177 - 253
Target Start/End: Original strand, 50018669 - 50018745
Alignment:
Q  177 ttggaagtagat-tgaatgaaatttgtgatattggaagtggatatgaatgagatttgtgatattgaaagtagatatga 253  Q
    |||||||||||| ||||||| |||||||| ||||||||| |||||||||||||||||||| | || ||||||||||||    
T  50018669 ttggaagtagatatgaatgagatttgtgaaattggaagtagatatgaatgagatttgtgaaactg-aagtagatatga 50018745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 648 - 745
Target Start/End: Original strand, 51429170 - 51429267
Alignment:
Q  648 tttcatcaatttgtttttctcttgttgcaccaaggttaactctttcaattgttcaagctcttgctccttgaattgtttgaattcaacccactcctttt 745  Q
    |||| ||||| |||||||||| |||||||||  |||  |||||||||| ||||||| |||||  ||||||| || |||||||| ||||||||||||||    
T  51429170 tttcttcaatctgtttttctcctgttgcaccttggtgtactctttcaaatgttcaatctctttatccttgatttctttgaattgaacccactcctttt 51429267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 570 - 632
Target Start/End: Original strand, 33935415 - 33935478
Alignment:
Q  570 gctctttcttccggtcatcgagatgctcttcagaac-taactttagatagagtttcattttctt 632  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||| | ||||||||||||    
T  33935415 gctcttttttccggtcatcaagatgctcttcagaacttaactttagatacattttcattttctt 33935478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 177 - 249
Target Start/End: Complemental strand, 42599908 - 42599835
Alignment:
Q  177 ttggaagtagat-tgaatgaaatttgtgatattggaagtggatatgaatgagatttgtgatattgaaagtagat 249  Q
    ||||||| |||| ||||||| |||||||| |||| |||| |||||||||||||||||||| |||| ||||||||    
T  42599908 ttggaagaagatatgaatgagatttgtgaaattgaaagtagatatgaatgagatttgtgaaattggaagtagat 42599835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 324 - 365
Target Start/End: Original strand, 50018990 - 50019031
Alignment:
Q  324 ataattattaaagcaaatagtatgtgaaataatggtcacaca 365  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  50018990 ataattattaaagcaaatagtatgtgaaataatggacacaca 50019031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 415 - 491
Target Start/End: Original strand, 42562745 - 42562821
Alignment:
Q  415 gataattattaaagcaaacactacagacttgacaccattgacaattattaaagcaaacagtggggactaaacaacac 491  Q
    |||||||||||||||||||| |   |||| |||| || ||| |||||||||||||||||||| |||||| |||||||    
T  42562745 gataattattaaagcaaacagtgtggactagacaacactgataattattaaagcaaacagtgaggactagacaacac 42562821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 191 - 250
Target Start/End: Complemental strand, 10426065 - 10426006
Alignment:
Q  191 aatgaaatttgtgatattggaagtggatatgaatgagatttgtgatattgaaagtagata 250  Q
    ||||| |||||||||||||||| | |||| |||||||||||||||||||| || ||||||    
T  10426065 aatgagatttgtgatattggaaatagataggaatgagatttgtgatattggaaatagata 10426006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 207 - 253
Target Start/End: Complemental strand, 42599908 - 42599862
Alignment:
Q  207 ttggaagtggatatgaatgagatttgtgatattgaaagtagatatga 253  Q
    |||||||  |||||||||||||||||||| |||||||||||||||||    
T  42599908 ttggaagaagatatgaatgagatttgtgaaattgaaagtagatatga 42599862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 201 - 250
Target Start/End: Complemental strand, 6047084 - 6047035
Alignment:
Q  201 gtgatattggaagtggatatgaatgagatttgtgatattgaaagtagata 250  Q
    |||||||||||||| |||| |||||||||||||||||||| || ||||||    
T  6047084 gtgatattggaagtagataggaatgagatttgtgatattggaaatagata 6047035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 324 - 365
Target Start/End: Complemental strand, 33189121 - 33189080
Alignment:
Q  324 ataattattaaagcaaatagtatgtgaaataatggtcacaca 365  Q
    |||||||||||| |||||||||||||||||||||| ||||||    
T  33189121 ataattattaaaacaaatagtatgtgaaataatgggcacaca 33189080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 201 - 250
Target Start/End: Original strand, 42562582 - 42562631
Alignment:
Q  201 gtgatattggaagtggatatgaatgagatttgtgatattgaaagtagata 250  Q
    |||||||||||||| |||| |||||||||||||||||||| || ||||||    
T  42562582 gtgatattggaagtagataggaatgagatttgtgatattggaaatagata 42562631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 693 - 744
Target Start/End: Complemental strand, 30689617 - 30689566
Alignment:
Q  693 caattgttcaagctcttgctccttgaattgtttgaattcaacccactccttt 744  Q
    ||||||||||| ||||||| |||||| || |||||||| |||||||||||||    
T  30689617 caattgttcaatctcttgcaccttgatttctttgaattgaacccactccttt 30689566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 324 - 355
Target Start/End: Original strand, 33750602 - 33750633
Alignment:
Q  324 ataattattaaagcaaatagtatgtgaaataa 355  Q
    ||||||||||||||||||||||||||||||||    
T  33750602 ataattattaaagcaaatagtatgtgaaataa 33750633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 324 - 355
Target Start/End: Original strand, 50019038 - 50019069
Alignment:
Q  324 ataattattaaagcaaatagtatgtgaaataa 355  Q
    ||||||||||||||||||||||||||||||||    
T  50019038 ataattattaaagcaaatagtatgtgaaataa 50019069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 324 - 363
Target Start/End: Original strand, 51428933 - 51428972
Alignment:
Q  324 ataattattaaagcaaatagtatgtgaaataatggtcaca 363  Q
    |||||||||||||||||||||| |||||||||||| ||||    
T  51428933 ataattattaaagcaaatagtaggtgaaataatggccaca 51428972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 421 - 491
Target Start/End: Complemental strand, 42599505 - 42599435
Alignment:
Q  421 tattaaagcaaacactacagacttgacaccattgacaattattaaagcaaacagtggggactaaacaacac 491  Q
    |||||||||||||| |   |||| |||| || ||| |||||||||||||||||||| |||||| |||||||    
T  42599505 tattaaagcaaacagtcgggactagacaacactgataattattaaagcaaacagtgaggactagacaacac 42599435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 250
Target Start/End: Original strand, 17468195 - 17468244
Alignment:
Q  201 gtgatattggaagtggatatgaatgagatttgtgatattgaaagtagata 250  Q
    |||||||||||| | |||| |||||||||||||||||||| || ||||||    
T  17468195 gtgatattggaaatagataggaatgagatttgtgatattggaaatagata 17468244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 250
Target Start/End: Complemental strand, 30416818 - 30416769
Alignment:
Q  201 gtgatattggaagtggatatgaatgagatttgtgatattgaaagtagata 250  Q
    |||||||||||| | |||| |||||||||||||||||||| || ||||||    
T  30416818 gtgatattggaaatagataggaatgagatttgtgatattggaaatagata 30416769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 519 - 548
Target Start/End: Original strand, 53722755 - 53722784
Alignment:
Q  519 tatttgattgaaattaattttcaaacagct 548  Q
    ||||||||||||||||||||||||||||||    
T  53722755 tatttgattgaaattaattttcaaacagct 53722784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 155; Significance: 7e-82; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 155; E-Value: 7e-82
Query Start/End: Original strand, 415 - 745
Target Start/End: Complemental strand, 7586605 - 7586274
Alignment:
Q  415 gataattattaaagcaaacactacagacttgacaccattgacaattattaaagcaaacagtggggactaaacaacacagacaattttgatcgaatacnnn 514  Q
    |||||||||||||||||||||||| |||| |||| || |||||| |||||||||||||||| ||||||| ||||||| || ||| ||||  ||||||       
T  7586605 gataattattaaagcaaacactacggactagacaacactgacaaatattaaagcaaacagtcgggactagacaacactgataatgttgactgaatacaaa 7586506  T
Q  515 nnnntatttgattgaaattaattttcaaacagctcaagctccaacttttccaacagctctttcttccggtcatcgagatgctcttcagaac-taacttta 613  Q
        ||||||||| |||||||||||||||||||||| ||||||||||  |||||||||| ||||||||||||||||||||||||||    | ||||||||    
T  7586505 caaatatttgattaaaattaattttcaaacagctcacgctccaacttccccaacagctcattcttccggtcatcgagatgctcttcgtcccttaacttta 7586406  T
Q  614 gatagagtttcattttcttagcttcagtcttttctttcatcaatttgtttttctcttgttgcaccaaggttaactctttcaattgttcaagctcttgctc 713  Q
    |||| | ||||||||| ||||||| ||||||||||| || ||| |||||||||| ||||| |||||| |||||||||||||||||||||| |||||||||    
T  7586405 gatacattttcatttttttagcttgagtcttttcttgcagcaacttgtttttctgttgtttcaccaaagttaactctttcaattgttcaatctcttgctc 7586306  T
Q  714 cttgaattgtttgaattcaacccactcctttt 745  Q
     || |||| |||||||| |||||| |||||||    
T  7586305 ttttaattctttgaattgaacccattcctttt 7586274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 155; E-Value: 7e-82
Query Start/End: Original strand, 415 - 745
Target Start/End: Complemental strand, 30820685 - 30820354
Alignment:
Q  415 gataattattaaagcaaacactacagacttgacaccattgacaattattaaagcaaacagtggggactaaacaacacagacaattttgatcgaatacnnn 514  Q
    |||||||||||||||||||||||| |||| |||| || |||||| |||||||||||||||| ||||||| ||||||| || ||| ||||  ||||||       
T  30820685 gataattattaaagcaaacactacggactagacaacactgacaaatattaaagcaaacagtcgggactagacaacactgataatgttgactgaatacaaa 30820586  T
Q  515 nnnntatttgattgaaattaattttcaaacagctcaagctccaacttttccaacagctctttcttccggtcatcgagatgctcttcagaac-taacttta 613  Q
        ||||||||| |||||||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||||||||||    | ||||||||    
T  30820585 caaatatttgattaaaattaattttcaaacagctcacgctccaacttctccaacagctccttcttccggtcatcgagatgctcttcgtcccttaacttta 30820486  T
Q  614 gatagagtttcattttcttagcttcagtcttttctttcatcaatttgtttttctcttgttgcaccaaggttaactctttcaattgttcaagctcttgctc 713  Q
    |||| | ||||||||| ||||||| ||||||||||| || ||| |||||||||| ||||| ||||||  ||||||||||||||||||||| |||||||||    
T  30820485 gatacattttcatttttttagcttgagtcttttcttgcagcaacttgtttttctgttgtttcaccaaatttaactctttcaattgttcaatctcttgctc 30820386  T
Q  714 cttgaattgtttgaattcaacccactcctttt 745  Q
     || |||| |||||||| |||||| |||||||    
T  30820385 ttttaattctttgaattgaacccattcctttt 30820354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 150; E-Value: 7e-79
Query Start/End: Original strand, 416 - 745
Target Start/End: Original strand, 8854065 - 8854395
Alignment:
Q  416 ataattattaaagcaaacactacagacttgacaccattgacaattattaaagcaaacagtggggactaaacaacacagacaattttgatcgaatacnnnn 515  Q
    |||||||||||| |||||||||| |||| |||| || ||||||| ||||||||||||||| ||||||| ||||||| || ||| ||||  ||||||        
T  8854065 ataattattaaaacaaacactacggactagacaacactgacaatgattaaagcaaacagtcgggactagacaacactgataatgttgactgaatacaaac 8854164  T
Q  516 nnntatttgattgaaattaattttcaaacagctcaagctccaacttttccaacagctctttcttccggtcatcgagatgctcttcagaac-taactttag 614  Q
       ||||||||| |||||||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||||||||||    | |||||||||    
T  8854165 aaatatttgattaaaattaattttcaaacagctcacgctccaacttctccaacagctccttcttccggtcatcgagatgctcttcgtcccttaactttag 8854264  T
Q  615 atagagtttcattttcttagcttcagtcttttctttcatcaatttgtttttctcttgttgcaccaaggttaactctttcaattgttcaagctcttgctcc 714  Q
    ||| | ||||||||| ||||||| ||||||||||| || ||| |||||||||| ||||| ||||||  ||||||||||||||||||||| |||||||||     
T  8854265 atacattttcatttttttagcttgagtcttttcttgcagcaacttgtttttctgttgtttcaccaaatttaactctttcaattgttcaatctcttgctct 8854364  T
Q  715 ttgaattgtttgaattcaacccactcctttt 745  Q
    || |||| |||||||| |||||| |||||||    
T  8854365 tttaattctttgaattgaacccattcctttt 8854395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 415 - 745
Target Start/End: Complemental strand, 9073988 - 9073657
Alignment:
Q  415 gataattattaaagcaaacactacagacttgacaccattgacaattattaaagcaaacagtggggactaaacaacacagacaattttgatcgaatacnnn 514  Q
    |||||||||||||||||||||||| |||| |||| || |||||| |||||||||||||||| ||||||| ||||||| || ||| ||||  ||||||       
T  9073988 gataattattaaagcaaacactacggactagacaacactgacaaatattaaagcaaacagtcgggactagacaacactgataatgttgactgaatacaaa 9073889  T
Q  515 nnnntatttgattgaaattaattttcaaacagctcaagctccaacttttccaacagctctttcttccggtcatcgagatgctcttcagaac-taacttta 613  Q
        ||||||||| |||||||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||||||||||    | ||||||||    
T  9073888 caaatatttgattaaaattaattttcaaacagctcacgctccaacttctccaacagctccttcttccggtcatcgagatgctcttcgtcccttaacttta 9073789  T
Q  614 gatagagtttcattttcttagcttcagtcttttctttcatcaatttgtttttctcttgttgcaccaaggttaactctttcaattgttcaagctcttgctc 713  Q
    |||| | ||||||||| ||||||| ||||||||||| || ||| |||||||||| ||||| ||||||  ||||||||||||||||||||| ||||||| |    
T  9073788 gatacattttcatttttttagcttgagtcttttcttgcagcaacttgtttttctgttgtttcaccaaatttaactctttcaattgttcaatctcttgccc 9073689  T
Q  714 cttgaattgtttgaattcaacccactcctttt 745  Q
     || |||| |||||||| ||| || |||||||    
T  9073688 ttttaattctttgaattgaactcattcctttt 9073657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 415 - 745
Target Start/End: Original strand, 12856944 - 12857275
Alignment:
Q  415 gataattattaaagcaaacactacagacttgacaccattgacaattattaaagcaaacagtggggactaaacaacacagacaattttgatcgaatacnnn 514  Q
    |||||||||||||||||||||||| |||| |||| || |||||| |||||||||||||||| ||||||| ||||||| || ||| ||||  ||||||       
T  12856944 gataattattaaagcaaacactacggactagacaacactgacaaatattaaagcaaacagtcgggactagacaacactgataatgttgactgaatacaaa 12857043  T
Q  515 nnnntatttgattgaaattaattttcaaacagctcaagctccaacttttccaacagctctttcttccggtcatcgagatgctcttcagaac-taacttta 613  Q
        ||||||||| |||||||||||||||||||||| ||||||| || ||||||||||| ||||||||||||||||||||||||||    | ||||||||    
T  12857044 caaatatttgattaaaattaattttcaaacagctcacgctccaaattctccaacagctccttcttccggtcatcgagatgctcttcgtcccttaacttta 12857143  T
Q  614 gatagagtttcattttcttagcttcagtcttttctttcatcaatttgtttttctcttgttgcaccaaggttaactctttcaattgttcaagctcttgctc 713  Q
    |||| | ||||||||| ||||||| ||||||||||| || ||| |||||||||| || || ||||||  ||||||||||||||||||||| |||||||||    
T  12857144 gatacattttcatttttttagcttgagtcttttcttgcagcaacttgtttttctgttttttcaccaaatttaactctttcaattgttcaatctcttgctc 12857243  T
Q  714 cttgaattgtttgaattcaacccactcctttt 745  Q
     || |||| |||||||| |||||| |||||||    
T  12857244 ttttaattctttgaattgaacccattcctttt 12857275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 174 - 365
Target Start/End: Complemental strand, 31186589 - 31186384
Alignment:
Q  174 atattggaagtagat-tgaatgaaatttgtgatattggaagtggatatgaatgagatttgtgatattgaaagtagatatgagtccctat----------- 261  Q
    ||||||||||||||| | ||||| |||||||| ||||||||| ||| |||||||||||||||| |||| ||||||||||||||||||||               
T  31186589 atattggaagtagatataaatgagatttgtgaaattggaagtagatgtgaatgagatttgtgaaattggaagtagatatgagtccctatatataagtaca 31186490  T
Q  262 --gtgtggtggacactgacgcattcaaaataagttattgtattgtattaaagcaaacggttgagataattattaaagcaaatagtatgtgaaataatggt 359  Q
      |||||||||||| ||||| |||  ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||     
T  31186489 ttgtgtggtggacattgacggatttgaaataagttattgtattgtattaaagcaaatagttgagataattattaaagcaaatagtatgtgaaataatggg 31186390  T
Q  360 cacaca 365  Q
    ||||||    
T  31186389 cacaca 31186384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 177 - 365
Target Start/End: Complemental strand, 16442151 - 16441950
Alignment:
Q  177 ttggaagtagattgaatgaaatttgtgatattggaagtggatatgaatgagatttgtgatattgaaagtagatatgagtccctat-------------gt 263  Q
    ||||||||||||||||||| ||||||||| ||| ||||  |||||||||||||||||||||||| ||||| |||||| |||||||             ||    
T  16442151 ttggaagtagattgaatgagatttgtgattttgaaagtatatatgaatgagatttgtgatattggaagtaaatatgaatccctatatataagtacattgt 16442052  T
Q  264 gtggtggacactgacgcattcaaaataagttattgtattgtattaaagcaaacggttgagataattattaaagcaaatagtatgtgaaataatggtcaca 363  Q
    |||||||||||||||| |||| | |||||| ||||| |||||||||||||||| ||||| ||||||||||||||||| |  |||||||||||||| ||||    
T  16442051 gtggtggacactgacggattcgatataagtcattgtcttgtattaaagcaaacagttgaaataattattaaagcaaacataatgtgaaataatgggcaca 16441952  T
Q  364 ca 365  Q
    ||    
T  16441951 ca 16441950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 440 - 599
Target Start/End: Complemental strand, 40879879 - 40879722
Alignment:
Q  440 gacttgacaccattgacaattattaaagcaaacagtggggactaaacaacacagacaattttgatcgaatacnnnnnnntatttgattgaaattaatttt 539  Q
    |||| |||| || ||||||||||||||||||||| ||||||||| ||||||| ||||||||||| ||||  |       ||||||||||||||||||||     
T  40879879 gactagacaacactgacaattattaaagcaaacactggggactagacaacactgacaattttgaccgaa--caaacaaatatttgattgaaattaatttc 40879782  T
Q  540 caaacagctcaagctccaacttttccaacagctctttcttccggtcatcgagatgctctt 599  Q
     |||||||||| |||||||||||||||||||||| || ||||| ||||||||||||||||    
T  40879781 aaaacagctcacgctccaacttttccaacagctcctttttccgatcatcgagatgctctt 40879722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 455 - 632
Target Start/End: Complemental strand, 31205966 - 31205787
Alignment:
Q  455 acaattattaaagcaaacagtggggactaaacaa-cacagacaattttgatcgaatacnnnnnnntatttgattgaaattaattttcaaacagctcaagc 553  Q
    ||||||||||||||||||| ||||||||| |||| ||| ||||||| | | |||||||       ||||||||||||||||||||||||||||||||       
T  31205966 acaattattaaagcaaacactggggactagacaaacactgacaattattaccgaatacaaacaaatatttgattgaaattaattttcaaacagctcacat 31205867  T
Q  554 tccaacttttccaacagctctttcttccggtcatcgagatgctcttcagaac-taactttagatagagtttcattttctt 632  Q
    ||||| |||||||||| |||||| ||||||||||||||||  |||||||||| |||| ||| ||| ||||||||||||||    
T  31205866 tccaagttttccaacatctcttttttccggtcatcgagatattcttcagaacttaacattacatacagtttcattttctt 31205787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 177 - 363
Target Start/End: Complemental strand, 31206301 - 31206102
Alignment:
Q  177 ttggaagtagattgaat-gaaatttgtgatattggaagtggatatgaatgagatttgtgatattgaaagtagatatgagtccc-----------tat-gt 263  Q
    ||||||||||||||||| |   ||||||||||||||||| ||||| |||||||||||||| |||| ||||||||||| |||             ||| ||    
T  31206301 ttggaagtagattgaatagttttttgtgatattggaagtagatataaatgagatttgtgaaattggaagtagatatgtgtcttatatataagtatattgt 31206202  T
Q  264 gtggtggacactgacgcattcaaaataagttattgtattgtattaaagcaaacggttgagataattattaaagcaaatagtatgtgaaataatggtcaca 363  Q
    |||||||||| ||||| |||  ||||||||||||||||||||||||||||||  || |||||||||||||||||||||||||||||||||||||| ||||    
T  31206201 gtggtggacattgacggatttgaaataagttattgtattgtattaaagcaaatagtggagataattattaaagcaaatagtatgtgaaataatgggcaca 31206102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 261 - 365
Target Start/End: Complemental strand, 40880061 - 40879957
Alignment:
Q  261 tgtgtggtggacactgacgcattcaaaataagttattgtattgtattaaagcaaacggttgagataattattaaagcaaatagtatgtgaaataatggtc 360  Q
    ||||||||||||||| ||| |||  |||||| |||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| |    
T  40880061 tgtgtggtggacactaacggatttgaaataaattattgtattgtattaaagcaaacagtggagataattattaaagcaaatagtatgtgaaataatggcc 40879962  T
Q  361 acaca 365  Q
    |||||    
T  40879961 acaca 40879957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 453 - 632
Target Start/End: Complemental strand, 31186250 - 31186071
Alignment:
Q  453 tgacaattattaaagcaaacagtggggactaaacaacacagacaattttgatcgaatacnnnnnnntatttgattgaaattaattttcaaacagctcaag 552  Q
    ||||||||||||||| ||||| |||| |||| ||||||| ||||||| | | |||||||       |||||||||||||||||||||||||||||||| |    
T  31186250 tgacaattattaaagaaaacactggg-actagacaacactgacaattattaccgaatacaaacaaatatttgattgaaattaattttcaaacagctcacg 31186152  T
Q  553 ctccaacttttccaacagctctttcttccggtcatcgagatgctcttcagaac-taactttagatagagtttcattttctt 632  Q
     ||||| |||||||||| |||||| ||||||||||||||||| ||| | |||| |||| ||| ||| ||||||||||||||    
T  31186151 ttccaagttttccaacatctcttttttccggtcatcgagatgttctccggaacttaacattacatacagtttcattttctt 31186071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 648 - 745
Target Start/End: Original strand, 4278350 - 4278447
Alignment:
Q  648 tttcatcaatttgtttttctcttgttgcaccaaggttaactctttcaattgttcaagctcttgctccttgaattgtttgaattcaacccactcctttt 745  Q
    |||| ||||| |||||||||| |||||||||||||| |||||||| |||||||||| ||||||| |||||| || |||||||||||||||||||||||    
T  4278350 tttcttcaatctgtttttctcctgttgcaccaaggtgaactctttaaattgttcaatctcttgcaccttgatttctttgaattcaacccactcctttt 4278447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 174 - 340
Target Start/End: Complemental strand, 7586888 - 7586711
Alignment:
Q  174 atattggaagtagattg-aatgaaatttgtgatattggaagtggatatgaatgagatttgtgatattgaaagtagatatgagtcccta------------ 260  Q
    ||||||||| ||||| | ||||| |||||||||||||||| | |||| |||||||||||||||||||| ||||||| |||||||||||                
T  7586888 atattggaaatagataggaatgagatttgtgatattggaaatagataggaatgagatttgtgatattggaagtagacatgagtccctatatataagtaca 7586789  T
Q  261 -tgtgtggtggacactgacgcattcaaaataagttattgtattgtattaaagcaaacggttgagataattattaaagcaaa 340  Q
     |||||||| |||||| ||| |||| |||||||||||||||||||||||||||||||  |   ||||||||||||||||||    
T  7586788 ttgtgtggtcgacactaacggattcgaaataagttattgtattgtattaaagcaaacact---gataattattaaagcaaa 7586711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 174 - 261
Target Start/End: Complemental strand, 22349968 - 22349880
Alignment:
Q  174 atattggaagtagattg-aatgaaatttgtgatattggaagtggatatgaatgagatttgtgatattgaaagtagatatgagtccctat 261  Q
    ||||||||||||||| | ||||| |||||||||||||||| | |||| |||||||||||||||||||| ||||||| ||||||||||||    
T  22349968 atattggaagtagataggaatgagatttgtgatattggaaatagataggaatgagatttgtgatattggaagtagacatgagtccctat 22349880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 174 - 340
Target Start/End: Complemental strand, 30820968 - 30820791
Alignment:
Q  174 atattggaagtagattg-aatgaaatttgtgatattggaagtggatatgaatgagatttgtgatattgaaagtagatatgagtcccta------------ 260  Q
    ||||||||| ||||| | ||||| |||||||||||||||| | |||| |||||||||||||||||||| ||||||| |||||||||||                
T  30820968 atattggaaatagataggaatgagatttgtgatattggaaatagataggaatgagatttgtgatattggaagtagacatgagtccctatatataagtaca 30820869  T
Q  261 -tgtgtggtggacactgacgcattcaaaataagttattgtattgtattaaagcaaacggttgagataattattaaagcaaa 340  Q
     |||||||  |||||| ||| |||| |||||||||||||||||||||||||| ||||  |   ||||||||||||||||||    
T  30820868 ttgtgtggacgacactaacggattcgaaataagttattgtattgtattaaagaaaacact---gataattattaaagcaaa 30820791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 174 - 250
Target Start/End: Complemental strand, 22349999 - 22349922
Alignment:
Q  174 atattggaagtagattg-aatgaaatttgtgatattggaagtggatatgaatgagatttgtgatattgaaagtagata 250  Q
    ||||||||||||||| | ||||| |||||||||||||||||| |||| |||||||||||||||||||| || ||||||    
T  22349999 atattggaagtagataggaatgagatttgtgatattggaagtagataggaatgagatttgtgatattggaaatagata 22349922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 534 - 632
Target Start/End: Original strand, 4278258 - 4278355
Alignment:
Q  534 aattttcaaacagctcaagctccaacttttccaacagctctttcttccggtcatcgagatgctcttcagaac-taactttagatagagtttcattttctt 632  Q
    ||||| ||||||||||| ||||||||| ||||||||||| ||  || ||||||||||||||||||||  ||| |||||||| ||| ||||||||||||||    
T  4278258 aatttccaaacagctcacgctccaactcttccaacagctatt--tttcggtcatcgagatgctcttcgaaacttaactttacatacagtttcattttctt 4278355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 653 - 745
Target Start/End: Complemental strand, 31186071 - 31185979
Alignment:
Q  653 tcaatttgtttttctcttgttgcaccaaggttaactctttcaattgttcaagctcttgctccttgaattgtttgaattcaacccactcctttt 745  Q
    ||||| ||| |||||| |||||||||  ||| ||||||||||||||||| | ||||||| |||||| || ||||||||||||||||| |||||    
T  31186071 tcaatctgtatttctcatgttgcaccgcggtgaactctttcaattgttcgatctcttgcaccttgatttctttgaattcaacccacttctttt 31185979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 653 - 745
Target Start/End: Complemental strand, 31205787 - 31205693
Alignment:
Q  653 tcaatttgtttttctcttgttgcaccaaggttaactctttcaattgttcaagctcttgctccttga--attgtttgaattcaacccactcctttt 745  Q
    ||||| |||||||||| |||||||||  ||| ||||||||||||||||| | || |||| ||||||  ||| |||||||||||||||||||||||    
T  31205787 tcaatctgtttttctcctgttgcaccgcggtgaactctttcaattgttcgatctattgcaccttgattattttttgaattcaacccactcctttt 31205693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 177 - 261
Target Start/End: Original strand, 8853735 - 8853820
Alignment:
Q  177 ttggaagtagat-tgaatgaaatttgtgatattggaagtggatatgaatgagatttgtgatattgaaagtagatatgagtccctat 261  Q
    ||||||| |||| ||||||| |||||||| |||| |||| ||| | ||||||| |||||| |||||||||||||||||||||||||    
T  8853735 ttggaagaagatatgaatgagatttgtgaaattgaaagtagattttaatgagacttgtgaaattgaaagtagatatgagtccctat 8853820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 177 - 261
Target Start/End: Original strand, 12856697 - 12856782
Alignment:
Q  177 ttggaagtagat-tgaatgaaatttgtgatattggaagtggatatgaatgagatttgtgatattgaaagtagatatgagtccctat 261  Q
    ||||||| |||| ||||||| |||||||| |||| |||| ||| | ||||||| |||||| |||||||||||||||||||||||||    
T  12856697 ttggaagaagatatgaatgagatttgtgaaattgaaagtagattttaatgagacttgtgaaattgaaagtagatatgagtccctat 12856782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 201 - 250
Target Start/End: Complemental strand, 22350002 - 22349953
Alignment:
Q  201 gtgatattggaagtggatatgaatgagatttgtgatattgaaagtagata 250  Q
    |||||||||||||| |||| |||||||||||||||||||| |||||||||    
T  22350002 gtgatattggaagtagataggaatgagatttgtgatattggaagtagata 22349953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 177 - 249
Target Start/End: Complemental strand, 31186617 - 31186544
Alignment:
Q  177 ttggaagtagattgaat-gaaatttgtgatattggaagtggatatgaatgagatttgtgatattgaaagtagat 249  Q
    ||||||||||||||||| |   ||||||||||||||||| ||||| |||||||||||||| |||| ||||||||    
T  31186617 ttggaagtagattgaatagttttttgtgatattggaagtagatataaatgagatttgtgaaattggaagtagat 31186544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 324 - 355
Target Start/End: Complemental strand, 40879950 - 40879919
Alignment:
Q  324 ataattattaaagcaaatagtatgtgaaataa 355  Q
    ||||||||||||||||||||||||||||||||    
T  40879950 ataattattaaagcaaatagtatgtgaaataa 40879919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 207 - 253
Target Start/End: Complemental strand, 40880128 - 40880082
Alignment:
Q  207 ttggaagtggatatgaatgagatttgtgatattgaaagtagatatga 253  Q
    |||||||| |||||||||||||||||||| |||| || |||||||||    
T  40880128 ttggaagtagatatgaatgagatttgtgaaattggaactagatatga 40880082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 250
Target Start/End: Complemental strand, 7586891 - 7586842
Alignment:
Q  201 gtgatattggaagtggatatgaatgagatttgtgatattgaaagtagata 250  Q
    |||||||||||| | |||| |||||||||||||||||||| || ||||||    
T  7586891 gtgatattggaaatagataggaatgagatttgtgatattggaaatagata 7586842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 250
Target Start/End: Complemental strand, 30820971 - 30820922
Alignment:
Q  201 gtgatattggaagtggatatgaatgagatttgtgatattgaaagtagata 250  Q
    |||||||||||| | |||| |||||||||||||||||||| || ||||||    
T  30820971 gtgatattggaaatagataggaatgagatttgtgatattggaaatagata 30820922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 229
Target Start/End: Complemental strand, 40880128 - 40880075
Alignment:
Q  177 ttggaagtagat-tgaatgaaatttgtgatattggaagtggatatgaatgagat 229  Q
    |||||||||||| ||||||| |||||||| ||||||| | ||||||||||||||    
T  40880128 ttggaagtagatatgaatgagatttgtgaaattggaactagatatgaatgagat 40880075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1240 (Bit Score: 118; Significance: 8e-60; HSPs: 5)
Name: scaffold1240
Description:

Target: scaffold1240; HSP #1
Raw Score: 118; E-Value: 8e-60
Query Start/End: Original strand, 440 - 745
Target Start/End: Complemental strand, 738 - 453
Alignment:
Q  440 gacttgacaccattgacaattattaaagcaaacagtggggactaaacaacacagacaattttgatcgaatacnnnnnnntatttgattgaaattaatttt 539  Q
    |||| |||| || ||||||||||||||||||||| ||||||||| ||||||| ||||||||||| |||||||       ||||||||||||||||||||     
T  738 gactagacaacactgacaattattaaagcaaacactggggactatacaacactgacaattttgaccgaatacaaacaattatttgattgaaattaatttc 639  T
Q  540 caaacagctcaagctccaacttttccaacagctctttcttccggtcatcgagatgctcttcagaac-taactttagatagagtttcattttcttagcttc 638  Q
    ||||||||||| ||||||| ||||||||||||||||| | ||||||||||||||||||||| |||| |||||||| ||| |||||||||||||           
T  638 caaacagctcacgctccaagttttccaacagctctttttcccggtcatcgagatgctcttcggaacttaactttacatacagtttcattttct------- 546  T
Q  639 agtcttttctttcatcaatttgtttttctcttgttgcaccaaggttaactctttcaattgttcaagctcttgctccttgaattgtttgaattcaacccac 738  Q
                  ||||| |||||||||| ||||||||||||||  |||||||||||||||||| ||||||| |||||| || ||||||||||||||||    
T  545 --------------tcaatctgtttttctcctgttgcaccaaggtgtactctttcaattgttcaatctcttgcaccttgatttctttgaattcaacccac 460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1240; HSP #2
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 176 - 357
Target Start/End: Complemental strand, 1070 - 872
Alignment:
Q  176 attggaagtagat-tgaatgaaatttgtgatattggaagtggatatgaatgagatttgtgatattgaaagtagatatgagtcccta-------------t 261  Q
    |||| |||||||| ||||||| |||||||| ||||||||| | |||||||||||||||||| ||||||||||||||||||||||||             |    
T  1070 attgaaagtagatatgaatgagatttgtgaaattggaagtagttatgaatgagatttgtgaaattgaaagtagatatgagtccctatatataagtacatt 971  T
Q  262 gtgtggtggacactgacgcattcaaaataagttattgta-ttgtattaaagcaaac--ggttgagataattattaaagcaaatagtatgtgaaataatg 357  Q
    |||| ||||||||||||| |||| |||||||||||||||  || | ||| |  |||  ||| || |||||||||||||||||||||| |||||||||||    
T  970 gtgtcgtggacactgacggattcgaaataagttattgtaggtgaaataatgggaacgtggtggacataattattaaagcaaatagtaggtgaaataatg 872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1240; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 176 - 253
Target Start/End: Complemental strand, 1132 - 1054
Alignment:
Q  176 attggaagtag-attgaatgaaatttgtgatattggaagtggatatgaatgagatttgtgatattgaaagtagatatga 253  Q
    ||||||||||| ||| ||||| | |||||| ||||||||| |||||||||||||||||||| |||||||||||||||||    
T  1132 attggaagtagtattaaatgagaattgtgaaattggaagtagatatgaatgagatttgtgaaattgaaagtagatatga 1054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1240; HSP #4
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 176 - 253
Target Start/End: Complemental strand, 1101 - 1023
Alignment:
Q  176 attggaagtagat-tgaatgaaatttgtgatattggaagtggatatgaatgagatttgtgatattgaaagtagatatga 253  Q
    ||||||||||||| ||||||| |||||||| |||| |||| |||||||||||||||||||| |||| |||||| |||||    
T  1101 attggaagtagatatgaatgagatttgtgaaattgaaagtagatatgaatgagatttgtgaaattggaagtagttatga 1023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1240; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 324 - 355
Target Start/End: Complemental strand, 809 - 778
Alignment:
Q  324 ataattattaaagcaaatagtatgtgaaataa 355  Q
    ||||||||||||||||||||||||||||||||    
T  809 ataattattaaagcaaatagtatgtgaaataa 778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 109; Significance: 2e-54; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 419 - 739
Target Start/End: Complemental strand, 167405 - 167084
Alignment:
Q  419 attattaaagcaaacactacagacttgacaccattgacaattattaaagcaaacagtggggactaaacaacacagacaattttgatcgaatacnnnnnnn 518  Q
    ||||||||||||||||||| |||||||||| || |||||||||||| |||||||| ||||||||  |||  || ||||| ||||| ||||| |           
T  167405 attattaaagcaaacactatagacttgacatcactgacaattattagagcaaacactggggacttgacactactgacaagtttgaccgaatgcaaacaaa 167306  T
Q  519 tatttgattgaaattaattttcaaacagctcaagctccaacttttccaacagctctttcttccggtcatcgagatgctcttcagaac-taactttagata 617  Q
    || ||||||||||||||||| |||||| |||  |  ||||||||||||||| || ||||||||||||||||| |||||| ||||||| || ||||| |||    
T  167305 tacttgattgaaattaatttccaaacaactcttggcccaacttttccaacaactttttcttccggtcatcgaaatgctcctcagaacttagctttatata 167206  T
Q  618 gagtttcattttcttagcttcagtcttttctttcatcaatttgtttttctcttgttgcaccaaggttaactctttcaattgttcaagctcttgctccttg 717  Q
     | ||||||||||||||| | |||  ||||||||||||||| |||   ||| ||||| | ||||| || ||  | ||||||||||||||||| |||||||    
T  167205 cattttcattttcttagcatgagtgctttctttcatcaattggttagcctcctgttgtatcaaggctatcttgtccaattgttcaagctctttctccttg 167106  T
Q  718 aattgtttgaattcaacccact 739  Q
    ||||||||||||||| ||||||    
T  167105 aattgtttgaattcagcccact 167084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0658 (Bit Score: 104; Significance: 2e-51; HSPs: 4)
Name: scaffold0658
Description:

Target: scaffold0658; HSP #1
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 606 - 745
Target Start/End: Complemental strand, 7000 - 6861
Alignment:
Q  606 taactttagatagagtttcattttcttagcttcagtcttttctttcatcaatttgtttttctcttgttgcaccaaggttaactctttcaattgttcaagc 705  Q
    |||||||||||| | |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | |    
T  7000 taactttagatacattttcatcttcttagcttcagtcttttctttcatcaatttgtttttctcttgtttcaccaaggttaactctttcaattgttccatc 6901  T
Q  706 tcttgctccttgaattgtttgaattcaacccactcctttt 745  Q
    ||| ||||||| |||| |||||||||||||||||||||||    
T  6900 tctcgctcctttaattctttgaattcaacccactcctttt 6861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0658; HSP #2
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 222 - 365
Target Start/End: Complemental strand, 7365 - 7226
Alignment:
Q  222 aatgagatttgtgatattgaaagtagatatgagtccctatgtgtggtggacactgacgcattcaaaataagttattgtattgtattaaagcaaacggttg 321  Q
    |||||||||||||| |||||||||||||||||||     ||||| ||||||||||| | |||| ||||||||| |||||||||||||||||||||  |||    
T  7365 aatgagatttgtgaaattgaaagtagatatgagtat---tgtgtagtggacactgatgaattcgaaataagttgttgtattgtattaaagcaaaca-ttg 7270  T
Q  322 agataattattaaagcaaatagtatgtgaaataatggtcacaca 365  Q
     |||||||||||||||||||||||||||||||||||| ||||||    
T  7269 ggataattattaaagcaaatagtatgtgaaataatggacacaca 7226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0658; HSP #3
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 450 - 549
Target Start/End: Complemental strand, 7117 - 7019
Alignment:
Q  450 cattgacaattattaaagcaaacagtggggactaaacaacacagacaattttgatcgaatacnnnnnnntatttgattgaaattaattttcaaacagctc 549  Q
    |||||||||||||||||||||||| ||||||||| ||||||| ||||||||||| || ||||       |||||||||||||||||||| ||||||||||    
T  7117 cattgacaattattaaagcaaacactggggactagacaacactgacaattttgaccg-atacaaacaactatttgattgaaattaatttccaaacagctc 7019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0658; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 321 - 355
Target Start/End: Complemental strand, 7222 - 7188
Alignment:
Q  321 gagataattattaaagcaaatagtatgtgaaataa 355  Q
    |||||||||||||||||||||||||||||||||||    
T  7222 gagataattattaaagcaaatagtatgtgaaataa 7188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 74; Significance: 1e-33; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 177 - 365
Target Start/End: Original strand, 104523 - 104729
Alignment:
Q  177 ttggaagtagat-tgaatgaaatttgtgatattggaagtggatatgaatgagatttgtgatattgaaagtagatatgagtccctat-------------g 262  Q
    |||||||||||| ||||||| |||||||| ||||||||| |||||||||||||||||||| |||  |||||||||| |||||||||             |    
T  104523 ttggaagtagatatgaatgagatttgtgaaattggaagtagatatgaatgagatttgtgaaattagaagtagatataagtccctatatataagtaaattg 104622  T
Q  263 tgtggtggacactgacgcattcaaaataagttattgtattgtattaaagcaaacggttgagataattatta----aagcaaatagtatgtgaaataatgg 358  Q
    ||||||||| ||||||| |||  ||||||||||||||||||||||||||||||  ||  ||||||||||||    |||||||||||||||||||||||||    
T  104623 tgtggtggagactgacggatttgaaataagttattgtattgtattaaagcaaaaagtgaagataattattaaagcaagcaaatagtatgtgaaataatgg 104722  T
Q  359 tcacaca 365  Q
     ||||||    
T  104723 gcacaca 104729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 453 - 632
Target Start/End: Original strand, 104898 - 105078
Alignment:
Q  453 tgacaattattaaagcaaacagtggggactaaacaacacagacaattttgatcgaatacnnnnnnntatttgattgaaattaattttcaaacagctcaag 552  Q
    ||||||||||||||  ||||| |||| |||| ||||||| ||||||||||| |||||||       ||||||| ||||||||||||  ||||||||||      
T  104898 tgacaattattaaaataaacattgggaactagacaacactgacaattttgaccgaatacaaacaaatatttgactgaaattaatttcaaaacagctcaca 104997  T
Q  553 ctccaacttttccaacagctctttcttccggtcatcgagatgctcttcagaac-taactttagatagagtttcattttctt 632  Q
    ||||||||  |||||| || |||| ||||||||||| ||||||||||| |||| |||||||| ||| ||||||||||||||    
T  104998 ctccaactcctccaaccgcgcttttttccggtcatcaagatgctcttcggaacttaactttacatacagtttcattttctt 105078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 685 - 745
Target Start/End: Original strand, 105110 - 105170
Alignment:
Q  685 aactctttcaattgttcaagctcttgctccttgaattgtttgaattcaacccactcctttt 745  Q
    ||||||||||||||||||| ||||||| |||||| || |||||||| ||||||||||||||    
T  105110 aactctttcaattgttcaatctcttgcgccttgatttctttgaattgaacccactcctttt 105170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1384 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold1384
Description:

Target: scaffold1384; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 83 - 159
Target Start/End: Complemental strand, 1275 - 1200
Alignment:
Q  83 aacaagcagattttgataatccaaataactttacatatatcagaaaaagagaaagcaaaaagtgcatcgcatgcaat 159  Q
    ||||||||| ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  1275 aacaagcagcttttgataatccacata-ctttacatatatcagaaaaagagaaagcaaaaagtgcatcacatgcaat 1200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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