View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4974-Insertion-9 (Length: 407)
Name: NF4974-Insertion-9
Description: NF4974
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4974-Insertion-9 |
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Alignment Details
Target: chr7 (Bit Score: 183; Significance: 7e-99; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 183; E-Value: 7e-99
Query Start/End: Original strand, 8 - 209
Target Start/End: Complemental strand, 30171067 - 30170865
Alignment:
| Q |
8 |
ttgcgcagatggaaaggcagaggcagaggcaagggcagatagtgtttctgataaggcttctgaaaaaactaaacaatcagctgagtatgtcaaagataac |
107 |
Q |
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| T |
30171067 |
ttgcgcagatggaaaggcagaggcagaggcaagggcagatagtgtttctgataaggtttctgaaaaaactaaacaatcagctgagtatgtcaaagataat |
30170968 |
T |
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| Q |
108 |
gctgaggcagtgaggaggaacatgaacaaaaagaactgattcaaaacacaata-tttattgtatatgctaatttcatacttgccattttagccattaatt |
206 |
Q |
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| T |
30170967 |
gctgaggcagtgaggaggaacatgaacaaaaagaactgattcaaaacacaacattttattgtatatgctaatttcatacttgccattttagccattaatt |
30170868 |
T |
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| Q |
207 |
atg |
209 |
Q |
| |
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||| |
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| T |
30170867 |
atg |
30170865 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 242 - 407
Target Start/End: Complemental strand, 30170832 - 30170667
Alignment:
| Q |
242 |
taattgataaggcacaaaatgtatatggagaagatgcatgtttcttcccagtgccatagatgtgaagcaatgtcatatgtttcatcggtcaataaatatt |
341 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
30170832 |
taattgataaggcacaaaatgtatatggagaagatgcatgtttcttcccagtgccatagatgtgaagcgatgtcatatgtttcatcggtcaataaatatt |
30170733 |
T |
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| Q |
342 |
taagcatttcttgttccatatcgattatttgaatatttgagtaattgacaccatttgcacttacga |
407 |
Q |
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| T |
30170732 |
taagcatttcttgttccatatcgattatttgaatatttgagtaattgacaccatttgcacttacga |
30170667 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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